Your job contains 1 sequence.
>031086
MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT
VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR
SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIPLD
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031086
(166 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2175841 - symbol:AT5G60670 species:3702 "Arabi... 768 3.1e-76 1
TAIR|locus:2061753 - symbol:AT2G37190 species:3702 "Arabi... 763 1.0e-75 1
TAIR|locus:2084036 - symbol:AT3G53430 species:3702 "Arabi... 760 2.1e-75 1
POMBASE|SPCC16C4.13c - symbol:rpl1201 "60S ribosomal prot... 633 6.2e-62 1
POMBASE|SPCC31H12.04c - symbol:rpl1202 "60S ribosomal pro... 633 6.2e-62 1
WB|WBGene00004424 - symbol:rpl-12 species:6239 "Caenorhab... 616 3.9e-60 1
FB|FBgn0034968 - symbol:RpL12 "Ribosomal protein L12" spe... 615 5.0e-60 1
RGD|1565106 - symbol:Rpl12 "ribosomal protein L12" specie... 615 5.0e-60 1
RGD|1595128 - symbol:LOC685320 "similar to 60S ribosomal ... 615 5.0e-60 1
UNIPROTKB|P23358 - symbol:Rpl12 "60S ribosomal protein L1... 615 5.0e-60 1
RGD|1306318 - symbol:Rpl12-ps1 "ribosomal protein L12, ps... 611 1.3e-59 1
UNIPROTKB|P61284 - symbol:RPL12 "60S ribosomal protein L1... 610 1.7e-59 1
UNIPROTKB|E2RR58 - symbol:RPL12 "60S ribosomal protein L1... 610 1.7e-59 1
UNIPROTKB|P30050 - symbol:RPL12 "60S ribosomal protein L1... 610 1.7e-59 1
UNIPROTKB|Q6QAS5 - symbol:RPL12 "60S ribosomal protein L1... 610 1.7e-59 1
UNIPROTKB|F1LWC2 - symbol:F1LWC2 "Uncharacterized protein... 605 5.7e-59 1
ASPGD|ASPL0000053192 - symbol:AN0262 species:162425 "Emer... 599 2.5e-58 1
ZFIN|ZDB-GENE-030131-5297 - symbol:rpl12 "ribosomal prote... 596 5.1e-58 1
UNIPROTKB|G3MZG7 - symbol:LOC783641 "Uncharacterized prot... 591 1.7e-57 1
UNIPROTKB|E1BTG1 - symbol:RPL12 "Uncharacterized protein"... 589 2.8e-57 1
UNIPROTKB|F1MDX5 - symbol:F1MDX5 "Uncharacterized protein... 574 1.1e-55 1
UNIPROTKB|F1PUJ6 - symbol:RPL12 "60S ribosomal protein L1... 561 2.6e-54 1
DICTYBASE|DDB_G0288295 - symbol:rpl12 "S60 ribosomal prot... 547 8.0e-53 1
CGD|CAL0006405 - symbol:RPL12 species:5476 "Candida albic... 546 1.0e-52 1
SGD|S000000780 - symbol:RPL12A "Ribosomal 60S subunit pro... 545 1.3e-52 1
SGD|S000002826 - symbol:RPL12B "Ribosomal 60S subunit pro... 545 1.3e-52 1
UNIPROTKB|I3LBH4 - symbol:LOC100156825 "Uncharacterized p... 538 7.2e-52 1
UNIPROTKB|F1N3R2 - symbol:F1N3R2 "Uncharacterized protein... 530 5.1e-51 1
UNIPROTKB|I3LBL3 - symbol:LOC100523853 "Uncharacterized p... 523 2.8e-50 1
UNIPROTKB|I3LFQ4 - symbol:I3LFQ4 "Uncharacterized protein... 521 4.6e-50 1
RGD|1563956 - symbol:RGD1563956 "similar to 60S ribosomal... 519 7.4e-50 1
UNIPROTKB|J9NW89 - symbol:J9NW89 "Uncharacterized protein... 494 3.3e-47 1
UNIPROTKB|F1PHL1 - symbol:F1PHL1 "Uncharacterized protein... 481 7.9e-46 1
UNIPROTKB|F1LY34 - symbol:F1LY34 "Uncharacterized protein... 451 1.2e-42 1
UNIPROTKB|F1PJT3 - symbol:F1PJT3 "Uncharacterized protein... 442 1.1e-41 1
UNIPROTKB|F1MB63 - symbol:F1MB63 "Uncharacterized protein... 439 2.2e-41 1
UNIPROTKB|F1S1A2 - symbol:F1S1A2 "Uncharacterized protein... 436 4.6e-41 1
UNIPROTKB|F1M4N3 - symbol:LOC499782 "Protein LOC685320" s... 352 3.7e-32 1
UNIPROTKB|F1PH72 - symbol:F1PH72 "Uncharacterized protein... 311 8.2e-28 1
UNIPROTKB|J9NWC5 - symbol:PPHLN1 "Uncharacterized protein... 303 5.7e-27 1
UNIPROTKB|F1M2I2 - symbol:F1M2I2 "Uncharacterized protein... 244 1.0e-20 1
TIGR_CMR|CBU_0226 - symbol:CBU_0226 "ribosomal protein L1... 118 2.3e-07 1
UNIPROTKB|P66056 - symbol:rplK "50S ribosomal protein L11... 107 3.4e-06 1
ASPGD|ASPL0000056238 - symbol:AN0116 species:162425 "Emer... 101 0.00020 1
TIGR_CMR|ECH_0956 - symbol:ECH_0956 "ribosomal protein L1... 98 0.00042 1
>TAIR|locus:2175841 [details] [associations]
symbol:AT5G60670 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS;IDA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006412 EMBL:AB005246
GO:GO:0003735 GO:GO:0019843 GO:GO:0022625 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870
ProtClustDB:PLN03072 EMBL:AY039614 EMBL:AY078025 EMBL:AY088164
IPI:IPI00540499 RefSeq:NP_200875.1 UniGene:At.22910
ProteinModelPortal:Q9FF52 SMR:Q9FF52 STRING:Q9FF52 PRIDE:Q9FF52
EnsemblPlants:AT5G60670.1 GeneID:836188 KEGG:ath:AT5G60670
GeneFarm:222 TAIR:At5g60670 InParanoid:Q9FF52 OMA:TEILIRT
Genevestigator:Q9FF52 GermOnline:AT5G60670 Uniprot:Q9FF52
Length = 166
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 147/164 (89%), Positives = 158/164 (96%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPK DPSQ+VDVYVRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVT
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKLTVQNRQAKV VVPSAAALVIKALKEPERDRKK KNIKHNGNI+ DDVIEIAK+MRPR
Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVIEIAKIMRPR 120
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S+AK+LSGTVKEILGTCVSVGCTVDGKDP+DLQ+EI GD++IP
Sbjct: 121 SIAKELSGTVKEILGTCVSVGCTVDGKDPKDLQEEINSGDIDIP 164
>TAIR|locus:2061753 [details] [associations]
symbol:AT2G37190 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS;IDA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0009409 "response to cold"
evidence=IEP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005773
"vacuole" evidence=IDA] [GO:0022626 "cytosolic ribosome"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0008270
"zinc ion binding" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=RCA] [GO:0001510 "RNA methylation"
evidence=RCA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0009506 GO:GO:0009507 GO:GO:0005773
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006412
GO:GO:0009409 GO:GO:0008270 GO:GO:0003735 GO:GO:0019843
EMBL:AC006260 GO:GO:0022625 eggNOG:COG0080 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 EMBL:AF372896 EMBL:BT002673
EMBL:AY086293 EMBL:Z17756 IPI:IPI00516681 PIR:F84789
RefSeq:NP_181256.1 UniGene:At.25014 ProteinModelPortal:P50883
SMR:P50883 IntAct:P50883 STRING:P50883 PaxDb:P50883 PRIDE:P50883
ProMEX:P50883 EnsemblPlants:AT2G37190.1 GeneID:818295
KEGG:ath:AT2G37190 TAIR:At2g37190 HOGENOM:HOG000082125
InParanoid:P50883 KO:K02870 OMA:PRSMARE ProtClustDB:PLN03072
Genevestigator:P50883 GermOnline:AT2G37190 Uniprot:P50883
Length = 166
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 146/164 (89%), Positives = 158/164 (96%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPK DPSQ+VDVYVRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVT
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKLTVQNRQAKV VVPSAAALVIKALKEPERDRKK KNIKHNGNI+ DDV EIA++MRPR
Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPR 120
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S+AK+LSGTV+EILGTCVSVGCTVDGKDP+D+QQEI DG+VEIP
Sbjct: 121 SIAKELSGTVREILGTCVSVGCTVDGKDPKDIQQEIQDGEVEIP 164
>TAIR|locus:2084036 [details] [associations]
symbol:AT3G53430 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS;IDA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0016020
"membrane" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=RCA] [GO:0005794
"Golgi apparatus" evidence=RCA] [GO:0001510 "RNA methylation"
evidence=RCA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020
GO:GO:0006412 EMBL:AL132966 GO:GO:0003735 GO:GO:0019843
GO:GO:0022625 eggNOG:COG0080 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870 ProtClustDB:PLN03072
EMBL:AY140102 EMBL:BT002590 IPI:IPI00532442 PIR:T45883
RefSeq:NP_190911.1 UniGene:At.22805 UniGene:At.68911
ProteinModelPortal:Q9LFH5 SMR:Q9LFH5 IntAct:Q9LFH5 STRING:Q9LFH5
PaxDb:Q9LFH5 PRIDE:Q9LFH5 EnsemblPlants:AT3G53430.1 GeneID:824511
KEGG:ath:AT3G53430 GeneFarm:223 TAIR:At3g53430 InParanoid:Q9LFH5
OMA:TAEFNGM Genevestigator:Q9LFH5 GermOnline:AT3G53430
Uniprot:Q9LFH5
Length = 166
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 145/164 (88%), Positives = 158/164 (96%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPK DPSQ+VDVYVRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVT
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKLTVQNRQAKV VVPSAAALVIKALKEPERDRKK KNIKHNGNI+ DDV EIA++MRPR
Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPR 120
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S+AK+LSGTV+EILGTCVSVGCTVDGKDP+DLQQEI +G++EIP
Sbjct: 121 SIAKELSGTVREILGTCVSVGCTVDGKDPKDLQQEIQEGEIEIP 164
>POMBASE|SPCC16C4.13c [details] [associations]
symbol:rpl1201 "60S ribosomal protein L12.1/L12A"
species:4896 "Schizosaccharomyces pombe" [GO:0000027 "ribosomal
large subunit assembly" evidence=ISO] [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006412 "translation" evidence=ISO] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 PomBase:SPCC16C4.13c
PomBase:SPCC31H12.04c Pfam:PF03946 GO:GO:0005730 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0003735 GO:GO:0002181
GO:GO:0000027 GO:GO:0022625 eggNOG:COG0080 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870
OMA:PRSMARE PIR:T41103 RefSeq:NP_587897.1 RefSeq:NP_587923.1
ProteinModelPortal:O75000 SMR:O75000 IntAct:O75000
MINT:MINT-4682375 STRING:O75000 PRIDE:O75000
EnsemblFungi:SPCC16C4.13c.1 EnsemblFungi:SPCC31H12.04c.1
GeneID:2539010 GeneID:2539186 KEGG:spo:SPCC16C4.13c
KEGG:spo:SPCC31H12.04c OrthoDB:EOG4TTKT9 NextBio:20800184
Uniprot:O75000
Length = 165
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 118/164 (71%), Positives = 145/164 (88%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP++V +++R GGEV S+LAPKIGPLGLSPKK+GEDIAK T KDWKGLRVT
Sbjct: 1 MPPKFDPNEVKTIFMRAVGGEVAGGSTLAPKIGPLGLSPKKVGEDIAKAT-KDWKGLRVT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKLT+QNRQA V+VVPSA+ALVIKALKEP RDRKK KN+ H+GN++LD++IE+A+ MR +
Sbjct: 60 VKLTIQNRQAAVSVVPSASALVIKALKEPARDRKKDKNVAHSGNVSLDEIIEVARTMRFK 119
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S+AK+LSGTVKEILGT SVGCTVDGK+P D+Q+EI +G++EIP
Sbjct: 120 SLAKELSGTVKEILGTAFSVGCTVDGKNPHDVQKEIDNGEIEIP 163
>POMBASE|SPCC31H12.04c [details] [associations]
symbol:rpl1202 "60S ribosomal protein L12.1/L12A"
species:4896 "Schizosaccharomyces pombe" [GO:0000027 "ribosomal
large subunit assembly" evidence=ISO] [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] [GO:0006412
"translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
PomBase:SPCC16C4.13c PomBase:SPCC31H12.04c Pfam:PF03946
GO:GO:0005730 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003723
GO:GO:0003735 GO:GO:0002181 GO:GO:0000027 GO:GO:0022625
eggNOG:COG0080 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870 OMA:PRSMARE
PIR:T41103 RefSeq:NP_587897.1 RefSeq:NP_587923.1
ProteinModelPortal:O75000 SMR:O75000 IntAct:O75000
MINT:MINT-4682375 STRING:O75000 PRIDE:O75000
EnsemblFungi:SPCC16C4.13c.1 EnsemblFungi:SPCC31H12.04c.1
GeneID:2539010 GeneID:2539186 KEGG:spo:SPCC16C4.13c
KEGG:spo:SPCC31H12.04c OrthoDB:EOG4TTKT9 NextBio:20800184
Uniprot:O75000
Length = 165
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 118/164 (71%), Positives = 145/164 (88%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP++V +++R GGEV S+LAPKIGPLGLSPKK+GEDIAK T KDWKGLRVT
Sbjct: 1 MPPKFDPNEVKTIFMRAVGGEVAGGSTLAPKIGPLGLSPKKVGEDIAKAT-KDWKGLRVT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKLT+QNRQA V+VVPSA+ALVIKALKEP RDRKK KN+ H+GN++LD++IE+A+ MR +
Sbjct: 60 VKLTIQNRQAAVSVVPSASALVIKALKEPARDRKKDKNVAHSGNVSLDEIIEVARTMRFK 119
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S+AK+LSGTVKEILGT SVGCTVDGK+P D+Q+EI +G++EIP
Sbjct: 120 SLAKELSGTVKEILGTAFSVGCTVDGKNPHDVQKEIDNGEIEIP 163
>WB|WBGene00004424 [details] [associations]
symbol:rpl-12 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] InterPro:IPR000911
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0009792 GO:GO:0006898
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0032940
GO:GO:0006412 GO:GO:0000003 GO:GO:0003723 GO:GO:0005840
GO:GO:0003735 EMBL:Z82274 eggNOG:COG0080 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870
OMA:PRSMARE GeneTree:ENSGT00390000006922 PIR:T23150
RefSeq:NP_001040960.1 RefSeq:NP_502542.1 ProteinModelPortal:P61866
SMR:P61866 DIP:DIP-26259N IntAct:P61866 MINT:MINT-1060363
STRING:P61866 PaxDb:P61866 PRIDE:P61866 EnsemblMetazoa:JC8.3a
GeneID:178279 KEGG:cel:CELE_JC8.3 UCSC:JC8.3a.2 CTD:178279
WormBase:JC8.3a WormBase:JC8.3c InParanoid:P61866 NextBio:900474
Uniprot:P61866
Length = 165
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 113/164 (68%), Positives = 141/164 (85%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP+++ VY+R GGEVGA S+LAPK+GPLGLSPKKIGEDIAK T +DWKGL+VT
Sbjct: 1 MPPKFDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKAT-QDWKGLKVT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
KLT+QNR AK+ VVPSAA+L++K LKEP RDRKK KN+KHNG++T+D +I+IA++MRPR
Sbjct: 60 CKLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNGDLTVDTIIKIARIMRPR 119
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
SMAK L GTVKEILGT SVGCT+DG+ P D+ + I +G++EIP
Sbjct: 120 SMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEIEIP 163
>FB|FBgn0034968 [details] [associations]
symbol:RpL12 "Ribosomal protein L12" species:7227 "Drosophila
melanogaster" [GO:0006412 "translation" evidence=ISS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS] [GO:0003735
"structural constituent of ribosome" evidence=ISS;IDA] [GO:0005811
"lipid particle" evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0000022 "mitotic spindle elongation" evidence=IMP]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
EMBL:AE013599 GO:GO:0005811 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0000022 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 KO:K02870 OMA:PRSMARE GeneTree:ENSGT00390000006922
CTD:6136 ChiTaRS:RPL12 EMBL:AY071246 RefSeq:NP_524819.1
RefSeq:NP_726412.1 RefSeq:NP_726413.1 UniGene:Dm.7505 SMR:Q9W1B9
IntAct:Q9W1B9 MINT:MINT-312526 STRING:Q9W1B9
EnsemblMetazoa:FBtr0072174 EnsemblMetazoa:FBtr0072175
EnsemblMetazoa:FBtr0072176 GeneID:45329 KEGG:dme:Dmel_CG3195
UCSC:CG3195-RA FlyBase:FBgn0034968 InParanoid:Q9W1B9
OrthoDB:EOG4CC2HM GenomeRNAi:45329 NextBio:838036 Uniprot:Q9W1B9
Length = 165
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 115/166 (69%), Positives = 141/166 (84%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP++V VY+R GGEVGA SSLAPKIGPLGLSPKKIG+DIAK T+ DWKGL++T
Sbjct: 1 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATS-DWKGLKIT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
V LT+QNRQA ++VVPSAA+L+IKALKEP RDRKK KNIKH+GNI +D++ IA+VMRPR
Sbjct: 60 VCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPR 119
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIPLD 166
SMA++L GT KE+LGT SVGCTVDGK P D+ E+ +G +E+P +
Sbjct: 120 SMARELKGTCKEVLGTAQSVGCTVDGKHPHDVIDELNEGSIEVPAE 165
>RGD|1565106 [details] [associations]
symbol:Rpl12 "ribosomal protein L12" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 RGD:1565106 Pfam:PF03946
GO:GO:0006412 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0080 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870 OMA:PRSMARE
GeneTree:ENSGT00390000006922 CTD:6136 HOVERGEN:HBG007231
OrthoDB:EOG473PSB EMBL:X53504 IPI:IPI00475561 PIR:A36667
RefSeq:NP_001102668.1 UniGene:Rn.128979 UniGene:Rn.203094
UniGene:Rn.203151 ProteinModelPortal:P23358 SMR:P23358
IntAct:P23358 STRING:P23358 PRIDE:P23358 Ensembl:ENSRNOT00000042736
GeneID:499782 KEGG:rno:499782 UCSC:RGD:1565106 InParanoid:P23358
NextBio:703993 ArrayExpress:P23358 Genevestigator:P23358
GermOnline:ENSRNOG00000028993 Uniprot:P23358
Length = 165
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 115/164 (70%), Positives = 139/164 (84%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP+++ VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKHNGNIT D+++ IA+ MR R
Sbjct: 60 VKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHNGNITFDEIVNIARQMRHR 119
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S+A++LSGT+KEILGT SVGC VDG+ P D+ +I G VE P
Sbjct: 120 SLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>RGD|1595128 [details] [associations]
symbol:LOC685320 "similar to 60S ribosomal protein L12"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 RGD:1565106 RGD:1595128
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 IPI:IPI00779086
Ensembl:ENSRNOT00000021725 Uniprot:F8WFW0
Length = 191
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 115/164 (70%), Positives = 139/164 (84%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP+++ VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 27 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 85
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKHNGNIT D+++ IA+ MR R
Sbjct: 86 VKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHNGNITFDEIVNIARQMRHR 145
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S+A++LSGT+KEILGT SVGC VDG+ P D+ +I G VE P
Sbjct: 146 SLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 189
>UNIPROTKB|P23358 [details] [associations]
symbol:Rpl12 "60S ribosomal protein L12" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000911
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 RGD:1565106 Pfam:PF03946 GO:GO:0006412 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 eggNOG:COG0080 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870
OMA:PRSMARE GeneTree:ENSGT00390000006922 CTD:6136
HOVERGEN:HBG007231 OrthoDB:EOG473PSB EMBL:X53504 IPI:IPI00475561
PIR:A36667 RefSeq:NP_001102668.1 UniGene:Rn.128979
UniGene:Rn.203094 UniGene:Rn.203151 ProteinModelPortal:P23358
SMR:P23358 IntAct:P23358 STRING:P23358 PRIDE:P23358
Ensembl:ENSRNOT00000042736 GeneID:499782 KEGG:rno:499782
UCSC:RGD:1565106 InParanoid:P23358 NextBio:703993
ArrayExpress:P23358 Genevestigator:P23358
GermOnline:ENSRNOG00000028993 Uniprot:P23358
Length = 165
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 115/164 (70%), Positives = 139/164 (84%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP+++ VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKHNGNIT D+++ IA+ MR R
Sbjct: 60 VKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHNGNITFDEIVNIARQMRHR 119
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S+A++LSGT+KEILGT SVGC VDG+ P D+ +I G VE P
Sbjct: 120 SLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>RGD|1306318 [details] [associations]
symbol:Rpl12-ps1 "ribosomal protein L12, pseudogene 1"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 RGD:1306318 Pfam:PF03946
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 GeneTree:ENSGT00390000006922
OrthoDB:EOG473PSB IPI:IPI00210164 PRIDE:D3ZJE2
Ensembl:ENSRNOT00000003002 UCSC:RGD:1306318 OMA:ITDDINS
NextBio:641573 Uniprot:D3ZJE2
Length = 165
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 114/164 (69%), Positives = 138/164 (84%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP+++ VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKHNGNIT D+++ IA+ MR R
Sbjct: 60 VKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHNGNITFDEIVNIARQMRHR 119
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S+A++LSGT+KEILGT SVGC VDG P D+ +I G +E P
Sbjct: 120 SLARELSGTIKEILGTAQSVGCNVDGHHPHDITDDINSGAMECP 163
>UNIPROTKB|P61284 [details] [associations]
symbol:RPL12 "60S ribosomal protein L12" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
GO:GO:0006412 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
UniGene:Bt.23981 eggNOG:COG0080 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 HOGENOM:HOG000082125 KO:K02870
OMA:PRSMARE GeneTree:ENSGT00390000006922 EMBL:AY528249
EMBL:BC102693 EMBL:BC142032 IPI:IPI00700975 RefSeq:NP_991366.1
ProteinModelPortal:P61284 SMR:P61284 STRING:P61284 PRIDE:P61284
Ensembl:ENSBTAT00000009152 Ensembl:ENSBTAT00000009155 GeneID:404133
KEGG:bta:404133 CTD:6136 HOVERGEN:HBG007231 InParanoid:P61284
OrthoDB:EOG473PSB NextBio:20817570 ArrayExpress:P61284
Uniprot:P61284
Length = 165
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 114/164 (69%), Positives = 139/164 (84%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP+++ VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNIT D+++ IA+ MR R
Sbjct: 60 VKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHR 119
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S+A++LSGT+KEILGT SVGC VDG+ P D+ +I G VE P
Sbjct: 120 SLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>UNIPROTKB|E2RR58 [details] [associations]
symbol:RPL12 "60S ribosomal protein L12" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000911
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 KO:K02870 GeneTree:ENSGT00390000006922 CTD:6136
RefSeq:NP_001238885.1 UniGene:Cfa.39098 PDB:2ZKR PDBsum:2ZKR
ProteinModelPortal:E2RR58 SMR:E2RR58 PRIDE:E2RR58
Ensembl:ENSCAFT00000045165 GeneID:480716 KEGG:cfa:480716
EvolutionaryTrace:E2RR58 NextBio:20855696 Uniprot:E2RR58
Length = 165
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 114/164 (69%), Positives = 139/164 (84%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP+++ VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNIT D+++ IA+ MR R
Sbjct: 60 VKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHR 119
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S+A++LSGT+KEILGT SVGC VDG+ P D+ +I G VE P
Sbjct: 120 SLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>UNIPROTKB|P30050 [details] [associations]
symbol:RPL12 "60S ribosomal protein L12" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006412
"translation" evidence=NAS;TAS] [GO:0003735 "structural constituent
of ribosome" evidence=NAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
initiation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413 EMBL:CH471090
GO:GO:0003723 GO:GO:0003735 GO:GO:0006415 GO:GO:0006414
Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625 EMBL:AL445222
GO:GO:0019083 eggNOG:COG0080 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 KO:K02870 OMA:PRSMARE CTD:6136 HOVERGEN:HBG007231
OrthoDB:EOG473PSB EMBL:L06505 EMBL:BC050644 EMBL:BC059950
EMBL:BC094831 EMBL:BC105603 IPI:IPI00024933 IPI:IPI00816063
PIR:S35531 RefSeq:NP_000967.1 UniGene:Hs.408054
ProteinModelPortal:P30050 SMR:P30050 IntAct:P30050
MINT:MINT-2802291 STRING:P30050 PhosphoSite:P30050 DMDM:266921
SWISS-2DPAGE:P30050 PaxDb:P30050 PRIDE:P30050 DNASU:6136
Ensembl:ENST00000361436 Ensembl:ENST00000536368 GeneID:6136
KEGG:hsa:6136 UCSC:uc004bqy.2 UCSC:uc004bqz.2 GeneCards:GC09M130209
H-InvDB:HIX0170298 HGNC:HGNC:10302 HPA:HPA003403 MIM:180475
neXtProt:NX_P30050 PharmGKB:PA34665 InParanoid:P30050 ChiTaRS:RPL12
GenomeRNAi:6136 NextBio:23835 ArrayExpress:P30050 Bgee:P30050
CleanEx:HS_RPL12 Genevestigator:P30050 GermOnline:ENSG00000197958
Uniprot:P30050
Length = 165
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 114/164 (69%), Positives = 139/164 (84%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP+++ VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNIT D+++ IA+ MR R
Sbjct: 60 VKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHR 119
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S+A++LSGT+KEILGT SVGC VDG+ P D+ +I G VE P
Sbjct: 120 SLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>UNIPROTKB|Q6QAS5 [details] [associations]
symbol:RPL12 "60S ribosomal protein L12" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0080 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 HOGENOM:HOG000082125 OMA:PRSMARE
GeneTree:ENSGT00390000006922 HOVERGEN:HBG007231 OrthoDB:EOG473PSB
EMBL:CU407118 EMBL:AY550045 UniGene:Ssc.17945 STRING:Q6QAS5
Ensembl:ENSSSCT00000006171 Uniprot:Q6QAS5
Length = 191
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 114/164 (69%), Positives = 139/164 (84%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP+++ VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 27 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 85
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNIT D+++ IA+ MR R
Sbjct: 86 VKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHR 145
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S+A++LSGT+KEILGT SVGC VDG+ P D+ +I G VE P
Sbjct: 146 SLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 189
>UNIPROTKB|F1LWC2 [details] [associations]
symbol:F1LWC2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000911
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 IPI:IPI00950092 Ensembl:ENSRNOT00000041683
Ensembl:ENSRNOT00000048189 Uniprot:F1LWC2
Length = 165
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 114/163 (69%), Positives = 137/163 (84%)
Query: 2 PPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTV 61
P KFDP+++ VY+R TGGEVGA SSLAPKIGPLGLSPKK+G+DIAK T DWKGLR+TV
Sbjct: 2 PTKFDPNEIKVVYLRCTGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITV 60
Query: 62 KLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRS 121
KLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKHNGNIT D+++ IA+ MR RS
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHNGNITFDEIVNIARQMRHRS 120
Query: 122 MAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
+A++LSGT+KEILGT SVGC VDG+ P D+ +I G VE P
Sbjct: 121 LARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>ASPGD|ASPL0000053192 [details] [associations]
symbol:AN0262 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0000027 "ribosomal large subunit
assembly" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
Pfam:PF00298 SMART:SM00649 Pfam:PF03946 EMBL:BN001308 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 OMA:PRSMARE EnsemblFungi:CADANIAT00002462
Uniprot:C8VUJ2
Length = 165
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 112/164 (68%), Positives = 140/164 (85%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP++V +++RVTGGEVGA S+LAPKIGPLGLSPKKIGEDIAK T DWKGLRVT
Sbjct: 1 MPPKFDPNEVKIIHLRVTGGEVGAQSALAPKIGPLGLSPKKIGEDIAKNTG-DWKGLRVT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
V+LT+QNRQA+V+VVPSA++LVIKALKEP RDRKK KNIKH +I D+++EIA+ MR R
Sbjct: 60 VRLTIQNRQAQVSVVPSASSLVIKALKEPPRDRKKEKNIKHTKSIPFDEIVEIARKMRSR 119
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S+AK+L GTV EILGT SVGC VDG+ P+D+ ++ G++++P
Sbjct: 120 SLAKELKGTVLEILGTAFSVGCKVDGRSPKDVSDDVKSGEIDVP 163
>ZFIN|ZDB-GENE-030131-5297 [details] [associations]
symbol:rpl12 "ribosomal protein L12" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 ZFIN:ZDB-GENE-030131-5297 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 KO:K02870 CTD:6136 HOVERGEN:HBG007231 EMBL:BC049061
IPI:IPI00509732 RefSeq:NP_963878.3 UniGene:Dr.75945
ProteinModelPortal:Q7ZUG1 SMR:Q7ZUG1 STRING:Q7ZUG1 GeneID:327089
KEGG:dre:327089 InParanoid:Q7ZUG1 NextBio:20809876
ArrayExpress:Q7ZUG1 Uniprot:Q7ZUG1
Length = 165
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 111/166 (66%), Positives = 139/166 (83%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP+++ V++R TGGEVGA SSLAPKIGPLGLSPKK+G+DIAK T DWKG R+T
Sbjct: 1 MPPKFDPNEIKVVFMRCTGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATG-DWKGPRIT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKLT+QNRQA + VVPSA+AL+IKALKEP RDRKK KNIKH+G++ D+++ IA+VMR R
Sbjct: 60 VKLTIQNRQAAIEVVPSASALIIKALKEPPRDRKKVKNIKHSGSVAFDEIVNIARVMRHR 119
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIPLD 166
S+A++LSGT+KEILGT SVGCT+DG+ P D+ +I G VE P +
Sbjct: 120 SIARELSGTIKEILGTAQSVGCTIDGRLPHDVIDDINSGAVECPTE 165
>UNIPROTKB|G3MZG7 [details] [associations]
symbol:LOC783641 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747 OMA:TEILIRT
GeneTree:ENSGT00390000006922 EMBL:DAAA02048410
RefSeq:XP_003587427.1 Ensembl:ENSBTAT00000023331 GeneID:783641
KEGG:bta:783641 Uniprot:G3MZG7
Length = 165
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 111/164 (67%), Positives = 137/164 (83%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP+++ VY+R TGGEVGA S+LAPKIG LGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGALGLSPKKVGDDIAKATG-DWKGLRIT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK +NIKH+GNIT D+++ IA+ M R
Sbjct: 60 VKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQRNIKHSGNITFDEIVNIARQMWHR 119
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S+A++LSGT+KEILGT SVGC VDG+ P D+ +I G VE P
Sbjct: 120 SLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>UNIPROTKB|E1BTG1 [details] [associations]
symbol:RPL12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
GO:GO:0006412 GO:GO:0003735 GO:GO:0022625 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 OMA:PRSMARE
GeneTree:ENSGT00390000006922 EMBL:AADN02026932 IPI:IPI00574602
Ensembl:ENSGALT00000014314 Uniprot:E1BTG1
Length = 169
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 110/166 (66%), Positives = 140/166 (84%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP++V VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 1 MPPKFDPTEVKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+G+++ D+++ IA+ MR R
Sbjct: 60 VKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGSVSFDEIVNIARQMRHR 119
Query: 121 SMAKDLS--GTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S+A++LS GT+KEILGT SVGC++DG+ P D+ +I G +E P
Sbjct: 120 SLARELSAAGTIKEILGTAQSVGCSIDGRHPHDIIDDINSGAIECP 165
>UNIPROTKB|F1MDX5 [details] [associations]
symbol:F1MDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 EMBL:DAAA02019094 IPI:IPI00704351
Ensembl:ENSBTAT00000024473 OMA:EIVNIAW NextBio:20928163
Uniprot:F1MDX5
Length = 165
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 110/164 (67%), Positives = 133/164 (81%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPK DP+++ VY+R TGGEVGA S LAPKIGPLGLSPKK+G+DIAK T WKGLR+T
Sbjct: 1 MPPKLDPNEIKVVYLRCTGGEVGAMSVLAPKIGPLGLSPKKVGDDIAKATG-GWKGLRIT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKLT+QNRQA++ VVPSA+ L+IKALKEP RDRKK KNIKH+GNIT D+++ IA M+ R
Sbjct: 60 VKLTIQNRQAQIEVVPSASTLIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIAWQMQHR 119
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S+A++LSGT+KEILGT SVGC VDG+ P D+ I G VE P
Sbjct: 120 SLARELSGTIKEILGTAQSVGCNVDGRHPYDIIDGINSGAVECP 163
>UNIPROTKB|F1PUJ6 [details] [associations]
symbol:RPL12 "60S ribosomal protein L12" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000911
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 GeneTree:ENSGT00390000006922 EMBL:AAEX03000628
Ensembl:ENSCAFT00000003405 OMA:FSIARTM Uniprot:F1PUJ6
Length = 165
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 108/164 (65%), Positives = 135/164 (82%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MP KFDP+++ VY+R TGGEVGA S+LA KI PLGLSPKK+G+DIAK T+ DWKGLR+T
Sbjct: 1 MPLKFDPNEIKVVYLRCTGGEVGATSALALKISPLGLSPKKVGDDIAKATS-DWKGLRIT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GN T D+++ IA+ M+ +
Sbjct: 60 VKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNNTFDEIVNIAQQMQHQ 119
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S+A++LSGT+KEILGT SVGC VDG P D+ +I G VE P
Sbjct: 120 SLARELSGTIKEILGTGQSVGCNVDGCHPHDIIDDINSGAVECP 163
>DICTYBASE|DDB_G0288295 [details] [associations]
symbol:rpl12 "S60 ribosomal protein L12"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000911
InterPro:IPR020783 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
dictyBase:DDB_G0288295 Pfam:PF03946 GO:GO:0006412
GenomeReviews:CM000154_GR GO:GO:0005840 GO:GO:0003735
EMBL:AAFI02000109 eggNOG:COG0080 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 KO:K02870 OMA:PRSMARE
RefSeq:XP_636797.1 HSSP:P35979 ProteinModelPortal:Q54J50 SMR:Q54J50
STRING:Q54J50 PRIDE:Q54J50 EnsemblProtists:DDB0229950
GeneID:8626554 KEGG:ddi:DDB_G0288295 ProtClustDB:PTZ00105
Uniprot:Q54J50
Length = 166
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 105/163 (64%), Positives = 133/163 (81%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPK DPS+ V+V++RV GGE GA S+LAPK+GPLG+SPKK+G+DIAK T + WKG++V+
Sbjct: 1 MPPKVDPSEKVEVFLRVCGGEAGAMSTLAPKLGPLGVSPKKVGDDIAKAT-QPWKGMKVS 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKLT+QNR A V+PSA+ALVIKALKEP RDRKK KNIKHNGNI L+++ +IAK MR +
Sbjct: 60 VKLTIQNRIAVPEVLPSASALVIKALKEPPRDRKKEKNIKHNGNIPLEEICKIAKTMRFK 119
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEI 163
S+A D G+V EILGT SVGC V+GK PRD+Q I G++E+
Sbjct: 120 SLAVDFKGSVLEILGTAHSVGCKVNGKSPRDIQAGIQSGEIEV 162
>CGD|CAL0006405 [details] [associations]
symbol:RPL12 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 CGD:CAL0006405
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0080
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
HOGENOM:HOG000082125 KO:K02870 RefSeq:XP_721592.1
RefSeq:XP_721712.1 ProteinModelPortal:Q5AJF7 SMR:Q5AJF7
STRING:Q5AJF7 GeneID:3636659 GeneID:3636787 KEGG:cal:CaO19.1635
KEGG:cal:CaO19.9203 Uniprot:Q5AJF7
Length = 165
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 103/164 (62%), Positives = 134/164 (81%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP++V +Y+R GGEVGA+S+LAPKIGPLGLSPKK+GEDIAK T K++KG++VT
Sbjct: 1 MPPKFDPNEVKFLYLRAVGGEVGASSALAPKIGPLGLSPKKVGEDIAKAT-KEYKGIKVT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
V+L +QNRQA +VVPSA++LVI ALKEP RDRKK KN+KH+GNI LD++ EIA+ M+ +
Sbjct: 60 VQLRIQNRQATASVVPSASSLVITALKEPVRDRKKEKNVKHSGNIPLDEIFEIARKMQHK 119
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S K+L+ KEILGT SVGC VDGK+P D+ I G++++P
Sbjct: 120 SFGKNLASVSKEILGTAQSVGCRVDGKNPHDIIDAINAGEIDVP 163
>SGD|S000000780 [details] [associations]
symbol:RPL12A "Ribosomal 60S subunit protein L12A"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;TAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=TAS]
[GO:0000027 "ribosomal large subunit assembly" evidence=IMP]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0002181 "cytoplasmic translation" evidence=TAS]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 SGD:S000000780
Pfam:PF03946 GO:GO:0003723 EMBL:BK006939 GO:GO:0003735
GO:GO:0002181 EMBL:U18795 GO:GO:0000027 PDB:3J16 PDBsum:3J16
GO:GO:0022625 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 PDB:1K5Y PDB:1S1I PDB:3IZS PDB:3O5H PDBsum:1K5Y
PDBsum:1S1I PDBsum:3IZS PDBsum:3O5H HOGENOM:HOG000082125 KO:K02870
EMBL:X51519 EMBL:AY693201 PIR:S13665 RefSeq:NP_010706.3
RefSeq:NP_010710.4 RefSeq:NP_010860.1 ProteinModelPortal:P0CX53
SMR:P0CX53 EnsemblFungi:YDR418W EnsemblFungi:YEL054C GeneID:852026
GeneID:852032 GeneID:856656 KEGG:sce:YDR418W KEGG:sce:YDR422C
KEGG:sce:YEL054C CYGD:YEL054c EvolutionaryTrace:P0CX53
NextBio:970252 ArrayExpress:P0CX53 GermOnline:YEL054C
Uniprot:P0CX53
Length = 165
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 104/164 (63%), Positives = 134/164 (81%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP++V +Y+R GGEVGA+++LAPKIGPLGLSPKK+GEDIAK T K++KG++VT
Sbjct: 1 MPPKFDPNEVKYLYLRAVGGEVGASAALAPKIGPLGLSPKKVGEDIAKAT-KEFKGIKVT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
V+L +QNRQA +VVPSA++LVI ALKEP RDRKK KN+KH+GNI LD++IEIA+ MR +
Sbjct: 60 VQLKIQNRQAAASVVPSASSLVITALKEPPRDRKKDKNVKHSGNIQLDEIIEIARQMRDK 119
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S + L+ KEILGT SVGC VD K+P D+ + I G++EIP
Sbjct: 120 SFGRTLASVTKEILGTAQSVGCRVDFKNPHDIIEGINAGEIEIP 163
>SGD|S000002826 [details] [associations]
symbol:RPL12B "Ribosomal 60S subunit protein L12B"
species:4932 "Saccharomyces cerevisiae" [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;TAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0002181 "cytoplasmic translation" evidence=TAS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=TAS] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0000027 "ribosomal
large subunit assembly" evidence=IMP] InterPro:IPR000911
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 SGD:S000002826 EMBL:U33007 Pfam:PF03946 EMBL:BK006938
GO:GO:0003723 GO:GO:0003735 GO:GO:0002181 GO:GO:0000027
GO:GO:0022625 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 KO:K02870 PIR:S13665 RefSeq:NP_010706.3
RefSeq:NP_010710.4 RefSeq:NP_010860.1 EnsemblFungi:YDR418W
EnsemblFungi:YEL054C GeneID:852026 GeneID:852032 GeneID:856656
KEGG:sce:YDR418W KEGG:sce:YDR422C KEGG:sce:YEL054C NextBio:970252
EMBL:X51520 ProteinModelPortal:P0CX54 SMR:P0CX54 CYGD:YDR418w
GeneTree:ENSGT00390000006922 ArrayExpress:P0CX54 GermOnline:YDR418W
Uniprot:P0CX54
Length = 165
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 104/164 (63%), Positives = 134/164 (81%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP++V +Y+R GGEVGA+++LAPKIGPLGLSPKK+GEDIAK T K++KG++VT
Sbjct: 1 MPPKFDPNEVKYLYLRAVGGEVGASAALAPKIGPLGLSPKKVGEDIAKAT-KEFKGIKVT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
V+L +QNRQA +VVPSA++LVI ALKEP RDRKK KN+KH+GNI LD++IEIA+ MR +
Sbjct: 60 VQLKIQNRQAAASVVPSASSLVITALKEPPRDRKKDKNVKHSGNIQLDEIIEIARQMRDK 119
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S + L+ KEILGT SVGC VD K+P D+ + I G++EIP
Sbjct: 120 SFGRTLASVTKEILGTAQSVGCRVDFKNPHDIIEGINAGEIEIP 163
>UNIPROTKB|I3LBH4 [details] [associations]
symbol:LOC100156825 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 EMBL:CU326405
Ensembl:ENSSSCT00000010794 Uniprot:I3LBH4
Length = 191
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 102/162 (62%), Positives = 133/162 (82%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKF+P+++ +Y+R T GE+ A S+LAPKIGPLGLSPK++G+DIAK A DWKGLR+T
Sbjct: 27 MPPKFNPNEIKAMYLRCTSGEISAKSALAPKIGPLGLSPKEVGDDIAK-AAGDWKGLRIT 85
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VK T+QNRQA++ VVPSA+AL+IKA KE RDRKK KNIKH+GNIT D+++ IA+ MR
Sbjct: 86 VKPTIQNRQAQMEVVPSASALIIKAPKELPRDRKKQKNIKHSGNITFDEIVNIARQMRRC 145
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVE 162
S+A++LSGT+KEILGT SVGC V+G+ P D+ +I+ G VE
Sbjct: 146 SLARELSGTIKEILGTAQSVGCNVNGRRPHDIIDDISSGAVE 187
>UNIPROTKB|F1N3R2 [details] [associations]
symbol:F1N3R2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
Pfam:PF00298 SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 GeneTree:ENSGT00390000006922 EMBL:DAAA02007492
IPI:IPI00691456 Ensembl:ENSBTAT00000038959 Uniprot:F1N3R2
Length = 192
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 105/162 (64%), Positives = 129/162 (79%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP+++ VY+R T GEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 33 MPPKFDPNEINVVYLRCTSGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 91
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKLT+Q RQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNIT D++I A+ M R
Sbjct: 92 VKLTIQYRQAQIQVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIINTARQMWHR 151
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVE 162
S+A++LSGT+KEILGT S+G P D+ +I G VE
Sbjct: 152 SLARELSGTIKEILGTTQSIG-----HHPHDVIDDINSGTVE 188
>UNIPROTKB|I3LBL3 [details] [associations]
symbol:LOC100523853 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 EMBL:FP090889
Ensembl:ENSSSCT00000016160 Uniprot:I3LBL3
Length = 191
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 103/164 (62%), Positives = 126/164 (76%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP ++ +Y+R TGGE GA S+LAPKIGP GLSPKK+G+DI K T DWKGLR+T
Sbjct: 27 MPPKFDPKEIKVMYLRCTGGEGGAPSALAPKIGPPGLSPKKVGDDITKATG-DWKGLRIT 85
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKLT+ NRQA++ VVPS +AL+IKALKE RDRKK KNIKH+GNIT + + IA+ MR
Sbjct: 86 VKLTIPNRQAQMEVVPSGSALIIKALKELPRDRKKQKNIKHSGNITFVETVSIARQMRHH 145
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S+A +LSGT+KEILGT SVGC V G+ P + +I G VE P
Sbjct: 146 SLAGELSGTLKEILGTAQSVGCNVGGRHPHAIIDDIHRGAVECP 189
>UNIPROTKB|I3LFQ4 [details] [associations]
symbol:I3LFQ4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 Ensembl:ENSSSCT00000029393 OMA:GCRINGK
Uniprot:I3LFQ4
Length = 167
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 102/165 (61%), Positives = 126/165 (76%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP+++ VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK A WKG
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAK--AXGWKGFATL 58
Query: 61 VK-LTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRP 119
K V + ++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNIT D+++ IA+ MR
Sbjct: 59 GKSYNVSLQVVQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRH 118
Query: 120 RSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
RS+A++LSG +KEILGT SVGC VDG+ P D+ +I G VE P
Sbjct: 119 RSLARELSGKIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>RGD|1563956 [details] [associations]
symbol:RGD1563956 "similar to 60S ribosomal protein L12"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 RGD:1563956 Pfam:PF03946
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 GeneTree:ENSGT00390000006922
OrthoDB:EOG473PSB IPI:IPI00362058 PRIDE:D4A8N3
Ensembl:ENSRNOT00000030686 NextBio:652136 Uniprot:D4A8N3
Length = 157
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 103/158 (65%), Positives = 126/158 (79%)
Query: 7 PSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ 66
P+++ VY+R T EV A S+LAPKIGPL LSPKK+G+DIAK T DWKGLR+TVKLT+Q
Sbjct: 3 PNEIKVVYLRCTRDEVRATSALAPKIGPLRLSPKKVGDDIAKTTG-DWKGLRITVKLTIQ 61
Query: 67 NRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDL 126
NRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNIT D+++ IA MR +S+A++L
Sbjct: 62 NRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIAGQMRHQSLAREL 121
Query: 127 SGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
SGT+KEILGT SVGC VDG+ P D I G VE P
Sbjct: 122 SGTIKEILGTAQSVGCNVDGRHPHD----INSGAVECP 155
>UNIPROTKB|J9NW89 [details] [associations]
symbol:J9NW89 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 Ensembl:ENSCAFT00000021487
Uniprot:J9NW89
Length = 171
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 99/164 (60%), Positives = 128/164 (78%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP+++ +++R TGGEVGA S+LA KI P GLSPKK+G DI K T WKGLR+T
Sbjct: 12 MPPKFDPNEINVMFLRCTGGEVGAMSALALKIDP-GLSPKKVGYDIVK-TGGYWKGLRIT 69
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKL +QNRQA++ V+PSA+AL+IKALKEP RDRK+ KNIKH+GNIT D+++ IA R
Sbjct: 70 VKLIIQNRQAQIEVIPSASALIIKALKEPPRDRKQQKNIKHSGNITFDELVNIAH----R 125
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S+A++LSGT+KEILGT SVGC V ++P D+ +I+ VE P
Sbjct: 126 SLARELSGTIKEILGTAQSVGCNVGCRNPHDIIDDISSYAVECP 169
>UNIPROTKB|F1PHL1 [details] [associations]
symbol:F1PHL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 Ensembl:ENSCAFT00000016097
Uniprot:F1PHL1
Length = 160
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 97/164 (59%), Positives = 125/164 (76%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP+++ +++R T GEV A S+LA KI P GLSPKK+G DI K TA WKGLR+T
Sbjct: 1 MPPKFDPNEINVMFLRCTSGEVSAMSALALKIDP-GLSPKKVGYDIVK-TAGYWKGLRIT 58
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKL +QNRQA++ V+PSA+AL+IKALKEP RDRK+ KNIKH+GNIT D+++ I R
Sbjct: 59 VKLIIQNRQAQIEVIPSASALIIKALKEPPRDRKQQKNIKHSGNITFDELVSIGH----R 114
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
S+A++LSGT+KEILGT SVGC V ++P D+ +I VE P
Sbjct: 115 SLARELSGTIKEILGTAQSVGCNVGCRNPHDIIDDINSYAVECP 158
>UNIPROTKB|F1LY34 [details] [associations]
symbol:F1LY34 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000911
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 GeneTree:ENSGT00390000006922 IPI:IPI00950870
Ensembl:ENSRNOT00000066710 Uniprot:F1LY34
Length = 171
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 95/156 (60%), Positives = 118/156 (75%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
M PKF PS++ V TGGEVG S+LA KIGP+ KK+G+D AK TA DWKGLRVT
Sbjct: 15 MLPKFKPSEIK---VMCTGGEVGVISTLALKIGPI----KKVGDDFAKATA-DWKGLRVT 66
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKL +Q RQ ++ VVPSA+AL++KALKEP RDRKK KNIK++GNIT D++I IA+ R
Sbjct: 67 VKLAIQ-RQVQIEVVPSASALIVKALKEPPRDRKKKKNIKYSGNITFDEIINIAQKTRHW 125
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEI 156
S+A++LSGT KEILGT SVGC VDG+ P D+ +I
Sbjct: 126 SLARELSGTSKEILGTAQSVGCNVDGRHPHDIIDDI 161
>UNIPROTKB|F1PJT3 [details] [associations]
symbol:F1PJT3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
GeneTree:ENSGT00390000006922 EMBL:AAEX03010427
Ensembl:ENSCAFT00000010621 OMA:NISSKRH Uniprot:F1PJT3
Length = 194
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 92/165 (55%), Positives = 119/165 (72%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
+PPKFDP ++ VY+R TGGEVGA S PKIGPLGLSPKK+G+D+AK T+ +WK LR+T
Sbjct: 34 LPPKFDP-EIKVVYLRCTGGEVGATS---PKIGPLGLSPKKVGDDMAKATS-NWKDLRIT 88
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIA-KVMRP 119
VKLT+QNRQA++ VVPSA+AL+I+ALK P RD K+ KNIKH+GNIT ++++ IA +
Sbjct: 89 VKLTIQNRQAQIEVVPSASALIIEALKGPPRDLKQ-KNIKHSGNITFEEIVNIADRCDTD 147
Query: 120 RSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
L + ILGT SVGC VDG P D++ +I G E P
Sbjct: 148 LEPENSLEPLKRSILGTGQSVGCNVDGCHPHDVRDDINSGAAECP 192
>UNIPROTKB|F1MB63 [details] [associations]
symbol:F1MB63 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
Pfam:PF00298 SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 GeneTree:ENSGT00390000006922 EMBL:DAAA02033567
IPI:IPI00906805 Ensembl:ENSBTAT00000014127 Uniprot:F1MB63
Length = 163
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 88/162 (54%), Positives = 116/162 (71%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
+PP + ++V VY+ TGGEVG S+L PKIGPLGL PK++ D K T DWKGLR+
Sbjct: 1 LPPGYHLNEVKVVYLWCTGGEVGVVSALLPKIGPLGLFPKEVDGDTTKATG-DWKGLRIK 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
+K+T QNRQAK V+PSA+AL++KALKEP R +K KNIKH+GNIT D++I IA+ + +
Sbjct: 60 MKMTTQNRQAKAEVIPSASALILKALKEPPR--QKQKNIKHSGNITFDEIINIAQQIWHQ 117
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVE 162
S+ ++LSGT+KEIL T SVGC D P D+ +I G VE
Sbjct: 118 SLPRELSGTIKEILATGQSVGCNADSCHPHDVIDDINSGVVE 159
>UNIPROTKB|F1S1A2 [details] [associations]
symbol:F1S1A2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000911 InterPro:IPR020783
InterPro:IPR020785 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 GeneTree:ENSGT00390000006922
EMBL:CU929934 Ensembl:ENSSSCT00000019265 Uniprot:F1S1A2
Length = 158
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 93/164 (56%), Positives = 118/164 (71%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
M PKFDP+++ +Y+R TGGE GA S+LAP IGPLGLSPKK+G+D+AK T D KGLR+
Sbjct: 1 MQPKFDPNKIKVIYLRCTGGEDGAPSALAPTIGPLGLSPKKVGDDVAKATG-DCKGLRII 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPR 120
VKLT+QNRQA++ VV SA+AL IKALKE R+RK+ KNIKHNG IT D+++ I R
Sbjct: 60 VKLTIQNRQAQIEVVASASALPIKALKELPRERKQQKNIKHNGYITFDEIVNI-----DR 114
Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
M +LSG +KEILGT SVGC V G + +I G ++ P
Sbjct: 115 QMG-ELSGAIKEILGTAQSVGCDVAGCH-HAIIDDINSGAMQSP 156
>UNIPROTKB|F1M4N3 [details] [associations]
symbol:LOC499782 "Protein LOC685320" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000911 SMART:SM00649
RGD:1595128 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF54747 IPI:IPI00948765 Ensembl:ENSRNOT00000064675
ArrayExpress:F1M4N3 Uniprot:F1M4N3
Length = 189
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 68/86 (79%), Positives = 78/86 (90%)
Query: 13 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV 72
VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKLT+QNRQA++
Sbjct: 104 VYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKLTIQNRQAQI 162
Query: 73 AVVPSAAALVIKALKEPERDRKKTKN 98
VVPSA+AL+IKALKEP RDRKK KN
Sbjct: 163 EVVPSASALIIKALKEPPRDRKKQKN 188
>UNIPROTKB|F1PH72 [details] [associations]
symbol:F1PH72 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000911
InterPro:IPR020783 SMART:SM00649 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 GeneTree:ENSGT00390000006922 EMBL:AAEX03003112
Ensembl:ENSCAFT00000004329 Uniprot:F1PH72
Length = 158
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 77/159 (48%), Positives = 103/159 (64%)
Query: 1 MPPKFDPSQVVDVYVR-VTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRV 59
M PKFDP V +Y+ + GGEV S L KI PL LSPKK G+DI K T K L +
Sbjct: 1 MLPKFDPKIKV-IYLWCIGGGEVCNTSVLVQKIRPLDLSPKKAGDDITKATG-GLKFLGI 58
Query: 60 TVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKK--TKNIKHNGNITLDDVIEIAKVM 117
TVKLT+QN QA++ VVPSA+AL+I+A P R+ + K+IKH+ N+T D++ M
Sbjct: 59 TVKLTIQNTQAQLEVVPSASALIIRA---PTRNHLEIEAKHIKHSANVTFDEL------M 109
Query: 118 RPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEI 156
RS+A++LS T+KEILGT +GC VDG P ++ +I
Sbjct: 110 WHRSLARELSKTIKEILGTAPYMGCNVDGCHPYEIIDDI 148
>UNIPROTKB|J9NWC5 [details] [associations]
symbol:PPHLN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000911
InterPro:IPR020783 SMART:SM00649 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 EMBL:AAEX03015128 GeneTree:ENSGT00390000016228
EMBL:AAEX03015129 Ensembl:ENSCAFT00000046129 Uniprot:J9NWC5
Length = 167
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 75/165 (45%), Positives = 99/165 (60%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
+PP+ PS+ VY+R T GEV A S L PKIG L SP ++ +D+AK T D
Sbjct: 17 IPPRSHPSETKIVYLRCTHGEVSALSVLVPKIGLLSPSPIEVADDLAKAT--D------D 68
Query: 61 VKLTVQNRQAKV-AVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRP 119
+T + Q + VV SA+AL+++ LKEP RD KK KNIKH+GNI+ D+++ IA+ M
Sbjct: 69 CVVTDHSEQTSLDEVVFSASALIVRVLKEPPRDWKKQKNIKHSGNISFDEIVSIAQQMHH 128
Query: 120 RSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 164
++AK SGT+KEILGT C VD P D I G VE P
Sbjct: 129 WALAKRFSGTIKEILGT----RCNVDDHHPHD----INSGTVECP 165
>UNIPROTKB|F1M2I2 [details] [associations]
symbol:F1M2I2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000911
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF54747 IPI:IPI00387938
Ensembl:ENSRNOT00000033403 Uniprot:F1M2I2
Length = 160
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 60/111 (54%), Positives = 74/111 (66%)
Query: 4 KFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKL 63
K DP ++ +++R TGG A+S PKIGP GLSPKK K T DWKGL VTVKL
Sbjct: 30 KADP-KIKAMHLRCTGGR---ATSALPKIGPPGLSPKK------KATG-DWKGLMVTVKL 78
Query: 64 TVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIA 114
T+QNRQA+ VVPSA AL +K L RDR+K +NIKH GNI D+++ A
Sbjct: 79 TIQNRQAQPEVVPSAPALALKEL----RDRRK-QNIKHTGNIAFDEIVNTA 124
Score = 109 (43.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 29/78 (37%), Positives = 39/78 (50%)
Query: 85 ALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTV 144
AL E ++ +NIKH GNI D+++ T +ILGT SVGCTV
Sbjct: 95 ALALKELRDRRKQNIKHTGNIAFDEIVN----------------TAPQILGTAPSVGCTV 138
Query: 145 DGKDPRDLQQEITDGDVE 162
DG P D+ + I G +E
Sbjct: 139 DGCQPHDIIEGINGGALE 156
>TIGR_CMR|CBU_0226 [details] [associations]
symbol:CBU_0226 "ribosomal protein L11" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 OMA:KQFNAKT
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 ProtClustDB:PRK00140 HAMAP:MF_00736_B
RefSeq:NP_819270.1 ProteinModelPortal:Q83ET4 SMR:Q83ET4
PRIDE:Q83ET4 GeneID:1208107 KEGG:cbu:CBU_0226 PATRIC:17929143
BioCyc:CBUR227377:GJ7S-232-MONOMER Uniprot:Q83ET4
Length = 145
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 36/136 (26%), Positives = 59/136 (43%)
Query: 14 YVR--VTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ-NRQA 70
Y+R + GE + + P +G G++ ++ E T KGL V +TV +R
Sbjct: 8 YIRLQIKAGEANPSPPVGPALGQHGVNIREFCESFNTATKNIEKGLPTPVIITVYADRTF 67
Query: 71 KVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTV 130
A++++K + N + G T + EIAK+ P A DL +
Sbjct: 68 SFITKTPPASVLLKKFVLKGKSGSARPNTEKVGKATRQQLEEIAKMKTPDLTAADLEAAI 127
Query: 131 KEILGTCVSVGCTVDG 146
+ I GT S+G V+G
Sbjct: 128 RTIAGTARSMGIDVEG 143
>UNIPROTKB|P66056 [details] [associations]
symbol:rplK "50S ribosomal protein L11" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000911
InterPro:IPR006519 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
GO:GO:0040007 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006412 GO:GO:0005840 EMBL:BX842574
GO:GO:0003735 GO:GO:0019843 eggNOG:COG0080 HOGENOM:HOG000082123
KO:K02867 OMA:KQFNAKT Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 ProtClustDB:PRK00140
HAMAP:MF_00736_B PIR:E70613 RefSeq:NP_215154.1 RefSeq:NP_335080.1
RefSeq:YP_006513981.1 ProteinModelPortal:P66056 SMR:P66056
PRIDE:P66056 EnsemblBacteria:EBMYCT00000002861
EnsemblBacteria:EBMYCT00000069820 GeneID:13318526 GeneID:888045
GeneID:925952 KEGG:mtc:MT0669 KEGG:mtu:Rv0640 KEGG:mtv:RVBD_0640
PATRIC:18123193 TubercuList:Rv0640 Uniprot:P66056
Length = 142
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 37/137 (27%), Positives = 68/137 (49%)
Query: 13 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTV-QNRQAK 71
+ +++ G+ A + P +G G++ + + T ++ +G + V++TV ++R
Sbjct: 11 IKLQIVAGQANPAPPVGPALGQHGVNIMEFCKAYNAAT-ENQRGNVIPVEITVYEDRSFT 69
Query: 72 VAV-VPSAAALVIKA--LKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSG 128
+ P AA L++KA + + + KTK K +T D V EIA+ + A D+
Sbjct: 70 FTLKTPPAAKLLLKAAGVAKGSAEPHKTKVAK----VTWDQVREIAETKKTDLNANDVDA 125
Query: 129 TVKEILGTCVSVGCTVD 145
K I GT S+G TV+
Sbjct: 126 AAKIIAGTARSMGITVE 142
>ASPGD|ASPL0000056238 [details] [associations]
symbol:AN0116 species:162425 "Emericella nidulans"
[GO:0006412 "translation" evidence=IEA] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000911
InterPro:IPR006519 InterPro:IPR020783 Pfam:PF00298 SMART:SM00649
Pfam:PF03946 EMBL:BN001308 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AACD01000004 eggNOG:COG0080 HOGENOM:HOG000082123
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 OMA:CKDFNEK OrthoDB:EOG4Q8872 RefSeq:XP_657720.1
ProteinModelPortal:Q5BH64 STRING:Q5BH64
EnsemblFungi:CADANIAT00002631 GeneID:2875895 KEGG:ani:AN0116.2
Uniprot:Q5BH64
Length = 153
Score = 101 (40.6 bits), Expect = 0.00020, P = 0.00020
Identities = 35/136 (25%), Positives = 63/136 (46%)
Query: 17 VTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ-NRQAKVAV- 74
V G+ + + P +G G+ ++ TA G+ + ++TV+ +R +
Sbjct: 16 VGAGQASPSPPVGPALGSKGVKSMDFCKEFNARTAHITTGVPIPARVTVRPDRSFHFDLR 75
Query: 75 VPSAAALVIKALK-EPERDR-KKTKNIKHN--GNITLDDVIEIAKVMRPRSMAKDLS--G 128
P+ L+++A K EP ++R + + H G I+L V EIAK+ + + LS G
Sbjct: 76 TPTTTYLLLQAAKVEPRKNRIRGAQRPGHEFIGKISLKHVYEIAKIKQSETRLSGLSLEG 135
Query: 129 TVKEILGTCVSVGCTV 144
K ++ SVG V
Sbjct: 136 LCKSVMAQAKSVGIQV 151
>TIGR_CMR|ECH_0956 [details] [associations]
symbol:ECH_0956 "ribosomal protein L11" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 eggNOG:COG0080
HOGENOM:HOG000082123 KO:K02867 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 TIGRFAMs:TIGR01632
ProtClustDB:PRK00140 RefSeq:YP_507744.1 ProteinModelPortal:Q2GFN9
STRING:Q2GFN9 GeneID:3927764 KEGG:ech:ECH_0956 PATRIC:20577294
OMA:KLEFMAM BioCyc:ECHA205920:GJNR-959-MONOMER Uniprot:Q2GFN9
Length = 147
Score = 98 (39.6 bits), Expect = 0.00042, P = 0.00042
Identities = 37/141 (26%), Positives = 61/141 (43%)
Query: 10 VVDVYVRVTGGEVGAASSLAPKIGPLGLS-PKKIGE--DIAKETAKDWK-GLRVTVKLTV 65
V + + + G+ +A +GP G+ PK E DI K +K G VT ++++
Sbjct: 6 VSKINLMIEAGKANPGPKIASVLGPRGIPMPKFCKEFNDITSGEGKQYKVGDLVTARISI 65
Query: 66 QNRQA-KVAVVPSAAALVIKALKEPERDRKKTKNIKHN-GNITLDDVIEIAKVMRPRSMA 123
N ++ + S + ++K K D+ K N G I + V EIAK A
Sbjct: 66 YNDKSYSFTISDSPVSYLLK--KAAAIDKGSVNPGKDNVGKIKMSAVYEIAKRKMSDMNA 123
Query: 124 KDLSGTVKEILGTCVSVGCTV 144
+ K ++GT S+G V
Sbjct: 124 DTVEAAAKMVIGTASSMGIVV 144
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.133 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 166 166 0.00097 107 3 11 23 0.45 32
30 0.46 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 45
No. of states in DFA: 568 (60 KB)
Total size of DFA: 128 KB (2082 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.45u 0.10s 17.55t Elapsed: 00:00:03
Total cpu time: 17.46u 0.10s 17.56t Elapsed: 00:00:03
Start: Fri May 10 10:28:01 2013 End: Fri May 10 10:28:04 2013