BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031095
(166 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O50003|RL12_PRUAR 60S ribosomal protein L12 OS=Prunus armeniaca GN=RPL12 PE=2 SV=1
Length = 166
Score = 311 bits (797), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 156/166 (93%), Positives = 162/166 (97%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETA DWKGLRVT
Sbjct: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETANDWKGLRVT 60
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPR 120
VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKTKNIKH+G+I+LDDVIEIAKIM+ R
Sbjct: 61 VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHSGHISLDDVIEIAKIMKHR 120
Query: 121 SMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPLD 166
SMAKEL+GTVKEIL TCVSVGCTVDGKDPKDLQQEI DGDVEIPLD
Sbjct: 121 SMAKELAGTVKEILRTCVSVGCTVDGKDPKDLQQEIADGDVEIPLD 166
>sp|Q9FF52|RL123_ARATH 60S ribosomal protein L12-3 OS=Arabidopsis thaliana GN=RPL12C PE=2
SV=1
Length = 166
Score = 306 bits (785), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/164 (92%), Positives = 159/164 (96%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPK DPSQ+VDVYVRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVT
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPR 120
VKLTVQNRQAKV VVPSAAALVIKALKEPERDRKK KNIKHNGNI+ DDVIEIAKIMRPR
Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVIEIAKIMRPR 120
Query: 121 SMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
S+AKELSGTVKEILGTCVSVGCTVDGKDPKDLQ+EIN GD++IP
Sbjct: 121 SIAKELSGTVKEILGTCVSVGCTVDGKDPKDLQEEINSGDIDIP 164
>sp|P50883|RL121_ARATH 60S ribosomal protein L12-1 OS=Arabidopsis thaliana GN=RPL12A PE=1
SV=2
Length = 166
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/164 (90%), Positives = 158/164 (96%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPK DPSQ+VDVYVRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVT
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPR 120
VKLTVQNRQAKV VVPSAAALVIKALKEPERDRKK KNIKHNGNI+ DDV EIA+IMRPR
Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPR 120
Query: 121 SMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
S+AKELSGTV+EILGTCVSVGCTVDGKDPKD+QQEI DG+VEIP
Sbjct: 121 SIAKELSGTVREILGTCVSVGCTVDGKDPKDIQQEIQDGEVEIP 164
>sp|Q9LFH5|RL122_ARATH 60S ribosomal protein L12-2 OS=Arabidopsis thaliana GN=RPL12B PE=1
SV=1
Length = 166
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/164 (90%), Positives = 158/164 (96%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPK DPSQ+VDVYVRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVT
Sbjct: 1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPR 120
VKLTVQNRQAKV VVPSAAALVIKALKEPERDRKK KNIKHNGNI+ DDV EIA+IMRPR
Sbjct: 61 VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPR 120
Query: 121 SMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
S+AKELSGTV+EILGTCVSVGCTVDGKDPKDLQQEI +G++EIP
Sbjct: 121 SIAKELSGTVREILGTCVSVGCTVDGKDPKDLQQEIQEGEIEIP 164
>sp|O75000|RL12_SCHPO 60S ribosomal protein L12 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl1201 PE=1 SV=1
Length = 165
Score = 252 bits (643), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 119/164 (72%), Positives = 146/164 (89%), Gaps = 1/164 (0%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP++V +++R GGEV S+LAPKIGPLGLSPKK+GEDIAK T KDWKGLRVT
Sbjct: 1 MPPKFDPNEVKTIFMRAVGGEVAGGSTLAPKIGPLGLSPKKVGEDIAKAT-KDWKGLRVT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPR 120
VKLT+QNRQA V+VVPSA+ALVIKALKEP RDRKK KN+ H+GN++LD++IE+A+ MR +
Sbjct: 60 VKLTIQNRQAAVSVVPSASALVIKALKEPARDRKKDKNVAHSGNVSLDEIIEVARTMRFK 119
Query: 121 SMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
S+AKELSGTVKEILGT SVGCTVDGK+P D+Q+EI++G++EIP
Sbjct: 120 SLAKELSGTVKEILGTAFSVGCTVDGKNPHDVQKEIDNGEIEIP 163
>sp|P23358|RL12_RAT 60S ribosomal protein L12 OS=Rattus norvegicus GN=Rpl12 PE=2 SV=1
Length = 165
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 117/164 (71%), Positives = 140/164 (85%), Gaps = 1/164 (0%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP+++ VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPR 120
VKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKHNGNIT D+++ IA+ MR R
Sbjct: 60 VKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHNGNITFDEIVNIARQMRHR 119
Query: 121 SMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
S+A+ELSGT+KEILGT SVGC VDG+ P D+ +IN G VE P
Sbjct: 120 SLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>sp|P50884|RL12_CHLRE 60S ribosomal protein L12 (Fragment) OS=Chlamydomonas reinhardtii
GN=RPL12 PE=2 SV=1
Length = 157
Score = 244 bits (623), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/155 (78%), Positives = 138/155 (89%)
Query: 10 VVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ 69
VV+V VRVTGGEVG ASSLAPKIGPLGLSPKKIGEDIAKET KDWKGLR+TVKLTVQNRQ
Sbjct: 1 VVEVCVRVTGGEVGDASSLAPKIGPLGLSPKKIGEDIAKETLKDWKGLRITVKLTVQNRQ 60
Query: 70 AKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAKELSGT 129
AK++V+PSAAALVIKALKEP RDRKK KNIKH G++T+ D+IEIA++MRPRS AK+L+
Sbjct: 61 AKISVIPSAAALVIKALKEPARDRKKEKNIKHTGSVTMSDIIEIARVMRPRSCAKDLANG 120
Query: 130 VKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
KEILGT VSVGC VDGKDP+D+ I+DG +EIP
Sbjct: 121 CKEILGTAVSVGCKVDGKDPRDVISAIDDGAIEIP 155
>sp|P35979|RL12_MOUSE 60S ribosomal protein L12 OS=Mus musculus GN=Rpl12 PE=1 SV=2
Length = 165
Score = 243 bits (620), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 117/164 (71%), Positives = 140/164 (85%), Gaps = 1/164 (0%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP++V VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 1 MPPKFDPNEVKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPR 120
VKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNIT D+++ IA+ MR R
Sbjct: 60 VKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHR 119
Query: 121 SMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
S+A+ELSGT+KEILGT SVGC VDG+ P D+ +IN G VE P
Sbjct: 120 SLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>sp|P30050|RL12_HUMAN 60S ribosomal protein L12 OS=Homo sapiens GN=RPL12 PE=1 SV=1
Length = 165
Score = 243 bits (619), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 116/164 (70%), Positives = 140/164 (85%), Gaps = 1/164 (0%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP+++ VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPR 120
VKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNIT D+++ IA+ MR R
Sbjct: 60 VKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHR 119
Query: 121 SMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
S+A+ELSGT+KEILGT SVGC VDG+ P D+ +IN G VE P
Sbjct: 120 SLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>sp|E2RR58|RL12_CANFA 60S ribosomal protein L12 OS=Canis familiaris GN=RPL12 PE=1 SV=1
Length = 165
Score = 243 bits (619), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 116/164 (70%), Positives = 140/164 (85%), Gaps = 1/164 (0%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP+++ VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPR 120
VKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNIT D+++ IA+ MR R
Sbjct: 60 VKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHR 119
Query: 121 SMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
S+A+ELSGT+KEILGT SVGC VDG+ P D+ +IN G VE P
Sbjct: 120 SLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>sp|P61284|RL12_BOVIN 60S ribosomal protein L12 OS=Bos taurus GN=RPL12 PE=2 SV=1
Length = 165
Score = 243 bits (619), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 116/164 (70%), Positives = 140/164 (85%), Gaps = 1/164 (0%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP+++ VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPR 120
VKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNIT D+++ IA+ MR R
Sbjct: 60 VKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHR 119
Query: 121 SMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
S+A+ELSGT+KEILGT SVGC VDG+ P D+ +IN G VE P
Sbjct: 120 SLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
>sp|Q6QMZ7|RL12_CHILA 60S ribosomal protein L12 OS=Chinchilla lanigera GN=RPL12 PE=2 SV=1
Length = 165
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 115/164 (70%), Positives = 140/164 (85%), Gaps = 1/164 (0%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP+++ VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+T
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRIT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPR 120
VKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNIT D+++ IA+ MR R
Sbjct: 60 VKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHR 119
Query: 121 SMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
S+A+ELSGT+KEILGT SVGC VD + P D+ +IN+G VE P
Sbjct: 120 SLARELSGTIKEILGTAQSVGCNVDNRHPHDIIDDINNGVVECP 163
>sp|P61866|RL12_CAEEL 60S ribosomal protein L12 OS=Caenorhabditis elegans GN=rpl-12 PE=3
SV=1
Length = 165
Score = 240 bits (612), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 114/164 (69%), Positives = 142/164 (86%), Gaps = 1/164 (0%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP+++ VY+R GGEVGA S+LAPK+GPLGLSPKKIGEDIAK T +DWKGL+VT
Sbjct: 1 MPPKFDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKAT-QDWKGLKVT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPR 120
KLT+QNR AK+ VVPSAA+L++K LKEP RDRKK KN+KHNG++T+D +I+IA+IMRPR
Sbjct: 60 CKLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNGDLTVDTIIKIARIMRPR 119
Query: 121 SMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
SMAK+L GTVKEILGT SVGCT+DG+ P D+ + I +G++EIP
Sbjct: 120 SMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEIEIP 163
>sp|P61865|RL12_CAEBR 60S ribosomal protein L12 OS=Caenorhabditis briggsae GN=rpl-12 PE=3
SV=1
Length = 165
Score = 240 bits (612), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 114/164 (69%), Positives = 142/164 (86%), Gaps = 1/164 (0%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP+++ VY+R GGEVGA S+LAPK+GPLGLSPKKIGEDIAK T +DWKGL+VT
Sbjct: 1 MPPKFDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKAT-QDWKGLKVT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPR 120
KLT+QNR AK+ VVPSAA+L++K LKEP RDRKK KN+KHNG++T+D +I+IA+IMRPR
Sbjct: 60 CKLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNGDLTVDTIIKIARIMRPR 119
Query: 121 SMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
SMAK+L GTVKEILGT SVGCT+DG+ P D+ + I +G++EIP
Sbjct: 120 SMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEIEIP 163
>sp|Q9C285|RL12_NEUCR 60S ribosomal protein L12 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rpl-12
PE=3 SV=1
Length = 165
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/164 (67%), Positives = 140/164 (85%), Gaps = 1/164 (0%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP++V + +R TGGEVGA+S+LAPKIGPLGLSPKK+GEDIAK T DWKGLRVT
Sbjct: 1 MPPKFDPNEVKVITLRATGGEVGASSALAPKIGPLGLSPKKVGEDIAKATG-DWKGLRVT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPR 120
VKLT+QNRQA V+VVP+A+ALVI+ALKEP RDRKK KNIKHN +++ D+++EIA+ MR +
Sbjct: 60 VKLTIQNRQAAVSVVPTASALVIRALKEPPRDRKKEKNIKHNKSVSFDEIVEIARTMRFK 119
Query: 121 SMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
S +KEL GTV E+LGT SVGC VDGK PK +Q+ I+ G++++P
Sbjct: 120 SFSKELKGTVLEVLGTAFSVGCQVDGKSPKAVQEAIHAGEIDVP 163
>sp|P0CX54|RL12B_YEAST 60S ribosomal protein L12-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL12B PE=1 SV=1
Length = 165
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/164 (64%), Positives = 135/164 (82%), Gaps = 1/164 (0%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP++V +Y+R GGEVGA+++LAPKIGPLGLSPKK+GEDIAK T K++KG++VT
Sbjct: 1 MPPKFDPNEVKYLYLRAVGGEVGASAALAPKIGPLGLSPKKVGEDIAKAT-KEFKGIKVT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPR 120
V+L +QNRQA +VVPSA++LVI ALKEP RDRKK KN+KH+GNI LD++IEIA+ MR +
Sbjct: 60 VQLKIQNRQAAASVVPSASSLVITALKEPPRDRKKDKNVKHSGNIQLDEIIEIARQMRDK 119
Query: 121 SMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
S + L+ KEILGT SVGC VD K+P D+ + IN G++EIP
Sbjct: 120 SFGRTLASVTKEILGTAQSVGCRVDFKNPHDIIEGINAGEIEIP 163
>sp|P0CX53|RL12A_YEAST 60S ribosomal protein L12-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL12A PE=1 SV=1
Length = 165
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/164 (64%), Positives = 135/164 (82%), Gaps = 1/164 (0%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPKFDP++V +Y+R GGEVGA+++LAPKIGPLGLSPKK+GEDIAK T K++KG++VT
Sbjct: 1 MPPKFDPNEVKYLYLRAVGGEVGASAALAPKIGPLGLSPKKVGEDIAKAT-KEFKGIKVT 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPR 120
V+L +QNRQA +VVPSA++LVI ALKEP RDRKK KN+KH+GNI LD++IEIA+ MR +
Sbjct: 60 VQLKIQNRQAAASVVPSASSLVITALKEPPRDRKKDKNVKHSGNIQLDEIIEIARQMRDK 119
Query: 121 SMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
S + L+ KEILGT SVGC VD K+P D+ + IN G++EIP
Sbjct: 120 SFGRTLASVTKEILGTAQSVGCRVDFKNPHDIIEGINAGEIEIP 163
>sp|Q54J50|RL12_DICDI 60S ribosomal protein L12 OS=Dictyostelium discoideum GN=rpl12 PE=1
SV=1
Length = 166
Score = 210 bits (534), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 103/163 (63%), Positives = 133/163 (81%), Gaps = 1/163 (0%)
Query: 1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
MPPK DPS+ V+V++RV GGE GA S+LAPK+GPLG+SPKK+G+DIAK T + WKG++V+
Sbjct: 1 MPPKVDPSEKVEVFLRVCGGEAGAMSTLAPKLGPLGVSPKKVGDDIAKAT-QPWKGMKVS 59
Query: 61 VKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPR 120
VKLT+QNR A V+PSA+ALVIKALKEP RDRKK KNIKHNGNI L+++ +IAK MR +
Sbjct: 60 VKLTIQNRIAVPEVLPSASALVIKALKEPPRDRKKEKNIKHNGNIPLEEICKIAKTMRFK 119
Query: 121 SMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEI 163
S+A + G+V EILGT SVGC V+GK P+D+Q I G++E+
Sbjct: 120 SLAVDFKGSVLEILGTAHSVGCKVNGKSPRDIQAGIQSGEIEV 162
>sp|Q8SR84|RL12_ENCCU 60S ribosomal protein L12 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL12 PE=1 SV=1
Length = 166
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 118/153 (77%), Gaps = 3/153 (1%)
Query: 13 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV 72
+ ++V GGEV A+ LA ++GPLGLS K +GEDI K TA D+K L+V V+L +++R+A V
Sbjct: 14 IKLQVVGGEVPGAT-LAQRVGPLGLSSKVVGEDIKKATA-DYKSLKVHVQLAIKDRKATV 71
Query: 73 AVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMR-PRSMAKELSGTVK 131
V PS A L+IK+LKEP RDRKK KNI HNG++ + +V++IA+I R RS + LSGTVK
Sbjct: 72 EVQPSVATLIIKSLKEPPRDRKKEKNILHNGSLRMTEVVDIARIARSSRSYSNSLSGTVK 131
Query: 132 EILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
E+LGTC S+GC VDGK PK++ +EI+ G++++P
Sbjct: 132 EVLGTCKSIGCKVDGKCPKEVTREIDAGEIKLP 164
>sp|O29712|RL11_ARCFU 50S ribosomal protein L11P OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rpl11p PE=3 SV=1
Length = 157
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 98/158 (62%), Gaps = 7/158 (4%)
Query: 9 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN- 67
QVV+V V GG+ L P IGPLGL+ K++ + I E KD++GL V VK+ V++
Sbjct: 3 QVVEVLV--PGGQASPGPPLGPAIGPLGLNVKQVVDKI-NEATKDYEGLSVPVKIIVKDD 59
Query: 68 RQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAKEL 126
R ++ V +P +AL+ + L + + + GN+T++ ++ IA+I R +S++ L
Sbjct: 60 RSFEIEVGIPPVSALIKRELGIEKGASNPGREVV--GNLTMEQLLNIARIKRQQSLSYTL 117
Query: 127 SGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
VKE+LGTC S+G TV+GK PK+L + I +G VEIP
Sbjct: 118 KEVVKEVLGTCNSMGITVEGKSPKELTRMIEEGQVEIP 155
>sp|Q8TZK0|RL11_PYRFU 50S ribosomal protein L11P OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rpl11p PE=1 SV=1
Length = 164
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 98/158 (62%), Gaps = 12/158 (7%)
Query: 7 PSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ 66
P QVV+V V GG+ L P IGPLGL+ K++ + I E KD+ G++V VK+ V
Sbjct: 2 PKQVVEVLVE--GGKATPGPPLGPAIGPLGLNVKQVVDKI-NEATKDFAGMQVPVKIIVD 58
Query: 67 --NRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIAKIMRPRS 121
+Q ++ V VP + L+ K L K + KHN GN+T++ VI+IAK+ + +
Sbjct: 59 PVTKQFEIEVGVPPTSQLIKKEL----GLEKGSGEPKHNIVGNLTMEQVIKIAKMKKDQM 114
Query: 122 MAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDG 159
+A L KE++GT +S+G TV+GKDP+++Q+EI++G
Sbjct: 115 LALTLKAAAKEVIGTALSMGVTVEGKDPREVQKEIDEG 152
>sp|P54030|RL11_METJA 50S ribosomal protein L11P OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rpl11p PE=3 SV=1
Length = 161
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 96/156 (61%), Gaps = 18/156 (11%)
Query: 13 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTV--QNRQA 70
V V VTGG A L P IGPLG++ ++ ++I ++T KD++G++V VK+ V + R+
Sbjct: 6 VEVLVTGGRATAGPPLGPAIGPLGVNVMQVVKEINEKT-KDYEGMQVPVKVIVDTETRKF 64
Query: 71 KVAV-VPSAAALVIKAL------KEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMA 123
++ V +P AL+ K L EP + GN+TL+ VI+IAK+ + ++
Sbjct: 65 EIEVGIPPTTALIKKELGIETAAHEPRHEV--------VGNLTLEQVIKIAKMKKDAMLS 116
Query: 124 KELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDG 159
L VKE+LGTC S+G TV+GKDPK++Q+EI+ G
Sbjct: 117 YTLKNAVKEVLGTCGSMGVTVEGKDPKEVQKEIDAG 152
>sp|Q9V2S3|RL11_PYRAB 50S ribosomal protein L11P OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rpl11p PE=3 SV=1
Length = 164
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 97/156 (62%), Gaps = 12/156 (7%)
Query: 9 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ-- 66
QVV+V V GG+ L P IGPLGL+ K++ + I E K++ G++V VK+ V
Sbjct: 4 QVVEVLVE--GGKATPGPPLGPAIGPLGLNVKQVVDKI-NEATKEFAGMQVPVKIIVDPV 60
Query: 67 NRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIAKIMRPRSMA 123
+Q ++ V VP + L+ K L K + KHN GN+T++ VI+IAK+ R + +A
Sbjct: 61 TKQFEIEVGVPPTSQLIKKELG----LEKGSGEPKHNIVGNLTMEQVIKIAKMKRNQMLA 116
Query: 124 KELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDG 159
L KE++GT +S+G TV+GKDP+++Q+EI++G
Sbjct: 117 LTLKAAAKEVIGTALSMGVTVEGKDPREVQREIDEG 152
>sp|O57779|RL11_PYRHO 50S ribosomal protein L11P OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl11p PE=3 SV=1
Length = 164
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 96/156 (61%), Gaps = 12/156 (7%)
Query: 9 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ-- 66
QVV+V V GG+ L P IGPLGL+ K++ + I E K++ G++V VK+ V
Sbjct: 4 QVVEVLVE--GGKATPGPPLGPAIGPLGLNVKQVVDKI-NEATKEFAGMQVPVKIIVDPV 60
Query: 67 NRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIAKIMRPRSMA 123
+Q ++ V VP + L+ K L K + KHN GN+T++ VI+IAK+ R + +A
Sbjct: 61 TKQFEIEVGVPPTSQLIKKELG----LEKGSGEPKHNIVGNLTMEQVIKIAKMKRSQMLA 116
Query: 124 KELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDG 159
L KE++GT +S+G TV+GKDP+ +Q+EI++G
Sbjct: 117 LTLKAAAKEVIGTALSMGVTVEGKDPRIVQREIDEG 152
>sp|Q5JH34|RL11_PYRKO 50S ribosomal protein L11P OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rpl11p PE=3 SV=1
Length = 165
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 98/158 (62%), Gaps = 13/158 (8%)
Query: 8 SQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN 67
+QVV+V V GG+ L P IGPLGL+ K++ ++I K T K+++G++V VK+ V++
Sbjct: 2 AQVVEVLVE--GGKASPGPPLGPAIGPLGLNVKQVVDEINKAT-KEFEGMQVPVKIIVED 58
Query: 68 RQAKV----AVVPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIAKIMRPRS 121
+ K +P + L+ K L P K + H GN+T++ VI+IAK+ +
Sbjct: 59 PKKKTFRIEVGIPPTSQLIKKELGIP----KGSSEAGHTPAGNLTMEQVIKIAKMKIDQM 114
Query: 122 MAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDG 159
+A L KE++GT +S+G TV+GKDP+++Q+EI++G
Sbjct: 115 LAPNLKAAAKEVIGTALSMGVTVEGKDPREVQREIDEG 152
>sp|A6UQ78|RL11_METVS 50S ribosomal protein L11P OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=rpl11p PE=3 SV=1
Length = 159
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 99/157 (63%), Gaps = 8/157 (5%)
Query: 9 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN- 67
QVV++ V TGG+ A L P IGPLG++ ++ + I +T KD++G+ V VK+ V+
Sbjct: 4 QVVEILV--TGGKATAGPPLGPAIGPLGVNIMQVVQMINTKT-KDYEGMSVPVKVIVETT 60
Query: 68 -RQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAKE 125
R +V V +P A+AL+ K L E ++ K+ K GNIT++ +++IAK+ + +A
Sbjct: 61 KRTFEVEVGIPPASALIKKELG-LESGSQEPKH-KVAGNITMEKIVKIAKMKQDAMLAYT 118
Query: 126 LSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVE 162
L KE++GTCVSVG V+GK PK+ Q+ ++ G+ +
Sbjct: 119 LKSAAKEVIGTCVSVGVNVEGKTPKEAQKAVDAGEFD 155
>sp|C5A426|RL11_THEGJ 50S ribosomal protein L11P OS=Thermococcus gammatolerans (strain
DSM 15229 / JCM 11827 / EJ3) GN=rpl11p PE=3 SV=1
Length = 165
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 98/157 (62%), Gaps = 13/157 (8%)
Query: 9 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNR 68
QVV+V V GG+ L P IGPLGL+ K++ ++I K T K+++G++V VK+ V++
Sbjct: 3 QVVEVLVE--GGKASPGPPLGPAIGPLGLNVKQVVDEINKAT-KEFEGMQVPVKIIVEDP 59
Query: 69 QAKV----AVVPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIAKIMRPRSM 122
+ K +P + L+ K L P K + H+ GN+T++ VI+IAK+ + +
Sbjct: 60 KKKTFRIEVGIPPTSQLIKKELGIP----KGSSEPVHSPVGNLTMEQVIKIAKMKIDQML 115
Query: 123 AKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDG 159
A L KE++GT +S+G TV+GKDP+++Q+EI++G
Sbjct: 116 APTLKAASKEVIGTALSMGVTVEGKDPREVQREIDEG 152
>sp|Q9HL70|RL11_THEAC 50S ribosomal protein L11P OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=rpl11p PE=3 SV=2
Length = 156
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 95/156 (60%), Gaps = 7/156 (4%)
Query: 12 DVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTV---QNR 68
V V GG+ + P +GPLGL+ ++ ++I ++T K+++G+RV V +TV + +
Sbjct: 4 SVKTMVEGGKATTGPPIGPALGPLGLNVAQVVKEINEKT-KEFQGMRVPVTITVVDPETK 62
Query: 69 QAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAKELS 127
+ ++ V +P +AL+ K L + K+ + I GN TLD ++++AK +A +L
Sbjct: 63 KYEITVGIPPTSALLKKKLGIEKGAAKRKEAIA--GNATLDQIVDVAKTKMASMLASDLK 120
Query: 128 GTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEI 163
E+LGTCVS+G VDGKDPK++Q++I G++ I
Sbjct: 121 AATLEVLGTCVSMGINVDGKDPKEVQRQIKAGEISI 156
>sp|Q8TX52|RL11_METKA 50S ribosomal protein L11P OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl11p PE=3 SV=1
Length = 166
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 97/150 (64%), Gaps = 4/150 (2%)
Query: 12 DVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTV--QNRQ 69
+V V + GG+ L P +GPLG++ +++ E+I ++T KD+KG+ V VK+ V + R+
Sbjct: 5 EVEVLIEGGKADPGPPLGPALGPLGVNIQEVVEEINRKT-KDFKGMEVPVKIIVDTETRE 63
Query: 70 AKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAKELSGT 129
+V V + +IK+ ++ + ++ + G+++++ VI+IAK+ ++ +L
Sbjct: 64 FEVKVGSPPTSAIIKSELGIDKGAHEPRH-ETVGDLSMEQVIKIAKMKFDDLLSYDLKTA 122
Query: 130 VKEILGTCVSVGCTVDGKDPKDLQQEINDG 159
KEILGTC S+G TV+GKDPK++Q+EI++G
Sbjct: 123 AKEILGTCGSMGVTVEGKDPKEVQKEIDEG 152
>sp|Q0W049|RL11_UNCMA 50S ribosomal protein L11P OS=Uncultured methanogenic archaeon RC-I
GN=rpl11p PE=3 SV=1
Length = 158
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 85/149 (57%), Gaps = 5/149 (3%)
Query: 13 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ-NRQAK 71
V V V GG+ L P +GPLG++ KK+ ++I +T KD+ G+ V VK+ V +R
Sbjct: 5 VEVLVPGGKANPGPPLGPALGPLGINIKKVVDEINNKT-KDYNGMTVPVKVIVDASRNFT 63
Query: 72 VAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAKELSGTV 130
V V P +ALV+ LK T N G++T++ I++A++ R ++ L V
Sbjct: 64 VEVGTPPTSALVLSELKL--EKGSGTPNTNFIGSLTIEQAIKVAQMKRDAMLSYTLKNAV 121
Query: 131 KEILGTCVSVGCTVDGKDPKDLQQEINDG 159
KE+ GTCVS+G ++GK PK+ E+N G
Sbjct: 122 KEVAGTCVSLGVMIEGKKPKEFIAEVNAG 150
>sp|B6YSX7|RL11_THEON 50S ribosomal protein L11P OS=Thermococcus onnurineus (strain NA1)
GN=rpl11p PE=3 SV=1
Length = 163
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 97/157 (61%), Gaps = 13/157 (8%)
Query: 9 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNR 68
QVV+V V GG+ L P IGPLGL+ K++ ++I K T KD++G++V VK+ V++
Sbjct: 3 QVVEVLVE--GGKASPGPPLGPAIGPLGLNVKQVVDEINKAT-KDFEGMQVPVKIIVEDP 59
Query: 69 QAKV----AVVPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIAKIMRPRSM 122
+ K VP + L+ K L P K + H+ GN+T++ VI IAK + +
Sbjct: 60 KKKTFRIEVGVPPVSQLIKKELGIP----KGSSEAGHSPVGNLTMEQVIRIAKAKMDQML 115
Query: 123 AKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDG 159
A +L KE++GT +S+G TV+GKDP+++Q+EI++G
Sbjct: 116 AADLKAAAKEVIGTALSMGVTVEGKDPREVQKEIDEG 152
>sp|A6VH19|RL11_METM7 50S ribosomal protein L11P OS=Methanococcus maripaludis (strain C7
/ ATCC BAA-1331) GN=rpl11p PE=3 SV=1
Length = 159
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 91/157 (57%), Gaps = 8/157 (5%)
Query: 9 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN- 67
QVV++ V +GG+ A L P IGPLG++ ++ + I E KD+ G+ V VK+ V
Sbjct: 4 QVVEILV--SGGKATAGPPLGPAIGPLGVNIMQVVQKI-NEMTKDYDGMSVPVKVIVNTD 60
Query: 68 -RQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAKE 125
R +V V +P A+ALV K L ++ + GN+T++ V++IAK+ + +A
Sbjct: 61 KRTFEVEVGIPPASALVKKELGITTGSQEPKHQVA--GNLTMEQVVKIAKMKQDAMLAYN 118
Query: 126 LSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVE 162
L KE++GTCVSVG V+G PK+ Q+ ++ G +
Sbjct: 119 LKNASKEVIGTCVSVGVNVEGMTPKEAQKAVDAGQFD 155
>sp|A9A9N0|RL11_METM6 50S ribosomal protein L11P OS=Methanococcus maripaludis (strain C6
/ ATCC BAA-1332) GN=rpl11p PE=3 SV=1
Length = 159
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 91/157 (57%), Gaps = 8/157 (5%)
Query: 9 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN- 67
QVV++ V +GG+ A L P IGPLG++ ++ + I E KD+ G+ V VK+ V
Sbjct: 4 QVVEILV--SGGKATAGPPLGPAIGPLGVNIMQVVQKI-NEMTKDYDGMSVPVKVIVNTD 60
Query: 68 -RQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAKE 125
R +V V +P A+ALV K L ++ + GN+T++ V++IAK+ + +A
Sbjct: 61 KRTFEVEVGIPPASALVKKELGITTGSQEPKHQVA--GNLTMEQVVKIAKMKQDAMLAYN 118
Query: 126 LSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVE 162
L KE++GTCVSVG V+G PK+ Q+ ++ G +
Sbjct: 119 LKNASKEVIGTCVSVGVNVEGMTPKEAQKAVDAGQFD 155
>sp|Q6L1Y0|RL11_PICTO 50S ribosomal protein L11P OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=rpl11p
PE=3 SV=1
Length = 155
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 10 VVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ 69
+V V V GG+ L P +GPLGL+ ++ +DI ++T K++ G++V V + V +
Sbjct: 1 MVAVKTMVEGGKATTGPPLGPALGPLGLNLGQVVKDINEKT-KNFAGMQVPVTVNVIDPA 59
Query: 70 AK----VAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAKE 125
K + VP +AL+ K L + KK + I GN TL+ + ++A+ R ++
Sbjct: 60 TKKYEIIVGVPPTSALLKKELGIEKGASKKKEKIA--GNATLEQIKKVAESKRSALLSYN 117
Query: 126 LSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEI 163
+ G V E+LG+ VS+G TVDG+DPK++Q+ I +G++EI
Sbjct: 118 MKGAVLEVLGSAVSLGITVDGRDPKEVQKMIKNGEIEI 155
>sp|P62445|RL11_METMP 50S ribosomal protein L11P OS=Methanococcus maripaludis (strain S2
/ LL) GN=rpl11p PE=3 SV=1
Length = 159
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 94/159 (59%), Gaps = 12/159 (7%)
Query: 9 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN- 67
QVV++ V +GG+ A L P IGPLG++ ++ + I T KD++G+ V VK+ V
Sbjct: 4 QVVEILV--SGGKATAGPPLGPAIGPLGVNIMQVVQKINNMT-KDYEGMSVPVKVIVDTD 60
Query: 68 -RQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIAKIMRPRSMA 123
R +V V +P A+AL+ K + K ++ KH GNIT++ +++IAK+ + +A
Sbjct: 61 KRTFEVEVGIPPASALIKKEIG----IEKGSQEPKHQVAGNITMEQIVKIAKMKQDAMLA 116
Query: 124 KELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVE 162
L KE++GTCVSVG +V+G P + Q+ I+ G +
Sbjct: 117 YNLKNASKEVVGTCVSVGISVEGMTPSEAQKAIDAGQFD 155
>sp|O27715|RL11_METTH 50S ribosomal protein L11P OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl11p PE=3 SV=1
Length = 160
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 92/150 (61%), Gaps = 6/150 (4%)
Query: 13 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN--RQA 70
V + + GG+ L P IGPLG++ ++ E+I ++TA D++G++V VK+ V R
Sbjct: 6 VEILIDGGKATPGPPLGPAIGPLGINMMQVVEEINRKTA-DFEGMKVPVKIIVDTDTRDF 64
Query: 71 KVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAKELSGT 129
+V V P AL++ LK + + + +I+++ V++IA++ ++ +
Sbjct: 65 EVEVGTPPTTALIMDELKLEKG--SQDPGMDKIADISMEQVLKIARMKFDALLSNDYKRA 122
Query: 130 VKEILGTCVSVGCTVDGKDPKDLQQEINDG 159
VKEI+GTCVS+G TV+GKDP+++Q+E++ G
Sbjct: 123 VKEIMGTCVSMGITVNGKDPREVQREVDQG 152
>sp|A3CSJ5|RL11_METMJ 50S ribosomal protein L11P OS=Methanoculleus marisnigri (strain
ATCC 35101 / DSM 1498 / JR1) GN=rpl11p PE=3 SV=1
Length = 158
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 92/154 (59%), Gaps = 9/154 (5%)
Query: 13 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTV---QNRQ 69
V V V GG+ A L P +GPLG++ K + +DI K+TA ++ G++V V +TV +N
Sbjct: 5 VEVLVPGGKATAGPPLGPALGPLGINVKAVVDDINKKTA-EFNGMQVPVTVTVDDKKNFT 63
Query: 70 AKVAVVPSAAALVIKALKEPERDRKKTK-NIKHNGNITLDDVIEIAKIMRPRSMAKELSG 128
+V + P+ A + +KE + T+ G++ L+ + IA++ ++ +L
Sbjct: 64 IEVGIPPTTALV----MKEAGITKGSTEPGALVAGDLPLEAAVRIARMKFDGMLSYDLKS 119
Query: 129 TVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVE 162
VKE+LGTCVSVG TV+GK P+++ Q +N+G+ +
Sbjct: 120 AVKEVLGTCVSVGVTVEGKKPREMIQAVNNGEYD 153
>sp|Q97BN1|RL11_THEVO 50S ribosomal protein L11P OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=rpl11p PE=3 SV=1
Length = 158
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 94/156 (60%), Gaps = 7/156 (4%)
Query: 12 DVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTV---QNR 68
V V GG+ + P +GPLGL+ ++ ++I ++T K+++G++V V +TV + +
Sbjct: 4 SVKTMVEGGKATTGPPIGPALGPLGLNVAQVVKEINEKT-KEFQGMQVPVTVTVIDPETK 62
Query: 69 QAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAKELS 127
+ ++ V VP +AL+ K L + KK + + GN TL+ + +A P +AK+L
Sbjct: 63 KYEITVGVPPTSALLKKELGLEKGASKKKEAV--AGNATLEQIKNVAIKKMPSMLAKDLK 120
Query: 128 GTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEI 163
V E+LGTCV++G V+GKDPK++Q+ I G ++I
Sbjct: 121 SAVLEVLGTCVAMGINVEGKDPKEVQKLIKSGQIKI 156
>sp|A4FW91|RL11_METM5 50S ribosomal protein L11P OS=Methanococcus maripaludis (strain C5
/ ATCC BAA-1333) GN=rpl11p PE=3 SV=1
Length = 159
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 93/165 (56%), Gaps = 24/165 (14%)
Query: 9 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN- 67
QVV++ V +GG+ A L P IGPLG++ ++ + I + KD+ G+ V VK+ V
Sbjct: 4 QVVEILV--SGGKATAGPPLGPAIGPLGVNIMQVVQKI-NDMTKDYDGMSVPVKVIVDTD 60
Query: 68 -RQAKVAV-VPSAAALVIKAL------KEPERDRKKTKNIKHN--GNITLDDVIEIAKIM 117
R +V V +P A+ALV K L +EP KH GN+T++ V++IAK+
Sbjct: 61 KRTFEVEVGIPPASALVKKELGIATGAQEP----------KHQVAGNLTMEQVVKIAKMK 110
Query: 118 RPRSMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVE 162
+ +A L KE++GTCVSVG V+G PK+ Q+ I+ G +
Sbjct: 111 QDAMLAYNLKNASKEVIGTCVSVGVNVEGMTPKEAQKAIDAGQFD 155
>sp|A4YH87|RL11_METS5 50S ribosomal protein L11P OS=Metallosphaera sedula (strain ATCC
51363 / DSM 5348) GN=rpl11p PE=3 SV=1
Length = 168
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 83/154 (53%), Gaps = 14/154 (9%)
Query: 13 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQA 70
+ V V GG V LAP + LGL+ +GE + K E +KG+ V V L V
Sbjct: 6 IKVVVEGGNVKPGPPLAPTLSQLGLN---VGEVVKKINEATSQFKGMTVPVTLDVDTDTK 62
Query: 71 KVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAKE 125
K V VP+ +L++K P D + K GNI++DDVIE+A +P AKE
Sbjct: 63 KYEVSVGVPTTTSLLVKKAGASGPSGDPEH----KKIGNISMDDVIEVAISKKPSLTAKE 118
Query: 126 LSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDG 159
L G VK ILGT S+G TVD KDPK + +E+ +G
Sbjct: 119 LKGAVKSILGTAKSIGLTVDNKDPKLVVREVEEG 152
>sp|Q2FQ31|RL11_METHJ 50S ribosomal protein L11P OS=Methanospirillum hungatei (strain
JF-1 / DSM 864) GN=rpl11p PE=3 SV=1
Length = 158
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 88/150 (58%), Gaps = 7/150 (4%)
Query: 13 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTV---QNRQ 69
V V V GG+ A L P +GPLG++ K + ++I K+TA + G++V V++ V +N
Sbjct: 5 VEVLVPGGKATAGPPLGPALGPLGINVKAVVDEINKKTA-SFNGMQVPVRVEVDEKKNFT 63
Query: 70 AKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAKELSGT 129
V + P+ A ++ +A E TK + G++ L+ + IAK+ ++ +L
Sbjct: 64 ISVGIPPTTALIMKEAGVEKGSGEPNTKIV---GDVPLEAAVTIAKMKLDDMLSYDLKNA 120
Query: 130 VKEILGTCVSVGCTVDGKDPKDLQQEINDG 159
VKE++GTCVS+G TV GK PKD+ +EI+ G
Sbjct: 121 VKEVVGTCVSLGITVSGKKPKDMLKEIDSG 150
>sp|A2STU0|RL11_METLZ 50S ribosomal protein L11P OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=rpl11p PE=3 SV=1
Length = 157
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 5/150 (3%)
Query: 13 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV 72
V V V GG A L P +GPLG++ K + +DI K+TA ++ G+ V V + V +++
Sbjct: 5 VEVLVPGGRATAGPPLGPALGPLGINVKAVVDDINKKTA-EFNGMSVPVTVMVDDKKNVT 63
Query: 73 AVV--PSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAKELSGTV 130
V P ALV+K + T N + GN+ L+ VI IAK+ ++ +L
Sbjct: 64 LTVGIPPTTALVMK--EAGVEKGSGTPNTQAVGNLPLEAVIRIAKMKMESMLSYDLKTAA 121
Query: 131 KEILGTCVSVGCTVDGKDPKDLQQEINDGD 160
KE++GTCVSVG TV+GK K +N G+
Sbjct: 122 KEVMGTCVSVGVTVEGKTAKQAIAAVNAGE 151
>sp|A9A582|RL11_NITMS 50S ribosomal protein L11P OS=Nitrosopumilus maritimus (strain
SCM1) GN=rpl11p PE=3 SV=1
Length = 159
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 83/146 (56%), Gaps = 6/146 (4%)
Query: 17 VTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV-- 74
VTGG A L P +GPLG++ ++ I +T KD++G++V V + V + K +
Sbjct: 10 VTGGGASAGPPLGPALGPLGVNIMEVINAINDKT-KDFEGMKVPVTVIVDSDTKKYEIEI 68
Query: 75 -VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAKELSGTVKEI 133
+PSAAAL++K + + + G++T+D V+++A S A L K I
Sbjct: 69 GIPSAAALIMK--EAGIQKGSGASGTEWAGDVTMDAVVKVANTKLENSYASSLKSVAKTI 126
Query: 134 LGTCVSVGCTVDGKDPKDLQQEINDG 159
+GTC+++G V+GK PK++ EIN+G
Sbjct: 127 VGTCLALGVKVEGKTPKEITAEINEG 152
>sp|A6UVR5|RL11_META3 50S ribosomal protein L11P OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rpl11p PE=3 SV=1
Length = 160
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 94/158 (59%), Gaps = 8/158 (5%)
Query: 8 SQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ- 66
++VVDV V TGG+ A L P +GPLG++ + ++I ++T KD+ G+ V VK+ V
Sbjct: 3 TEVVDVLV--TGGKATAGPPLGPAVGPLGINIMNVVKEINEKT-KDYAGMSVPVKVIVNT 59
Query: 67 -NRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAK 124
+R ++ V +P +AL IK ++ + K I GN++++ ++IAK+ + ++
Sbjct: 60 DDRSFEIEVGIPPTSAL-IKTELGLDKGSTEPKAIVA-GNLSMEQAVKIAKMKKDSMLSF 117
Query: 125 ELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVE 162
L KE++GTCVS G V+G P+D Q+ I+ G+ +
Sbjct: 118 TLKNATKEVIGTCVSTGINVEGMSPRDAQKAIDAGEFD 155
>sp|B8GIY2|RL11_METPE 50S ribosomal protein L11P OS=Methanosphaerula palustris (strain
ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rpl11p PE=3 SV=1
Length = 158
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 91/149 (61%), Gaps = 5/149 (3%)
Query: 13 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ-AK 71
V V V GG A + P +GPLG++ K + +DI K+TA ++ G++V VK+ V +++
Sbjct: 5 VEVLVPGGRATAGPPIGPALGPLGINVKAVVDDINKKTA-EFNGMQVPVKIEVDDKKNVT 63
Query: 72 VAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAKELSGTV 130
++V +P ALV+K + E+ + +I G++ ++ + IA++ ++ EL V
Sbjct: 64 ISVGIPPTTALVMKEVGI-EKGSAEPNSIIV-GDLPIEAAVRIARMKLDDMLSYELKTAV 121
Query: 131 KEILGTCVSVGCTVDGKDPKDLQQEINDG 159
KE++GTCVSVG TVDGK PK++ I+ G
Sbjct: 122 KEVIGTCVSVGVTVDGKKPKEILAAISAG 150
>sp|A2BN63|RL11_HYPBU 50S ribosomal protein L11P OS=Hyperthermus butylicus (strain DSM
5456 / JCM 9403) GN=rpl11p PE=3 SV=1
Length = 168
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 83/152 (54%), Gaps = 10/152 (6%)
Query: 13 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV 72
+ V+V GGE A LAP I LGL K+ EDI K T K +KG V VKL V +
Sbjct: 6 INVKVRGGEAKPAPPLAPAIEKLGLDVNKVVEDINKATEK-YKGFEVAVKLIVDENTKEY 64
Query: 73 AVV---PSAAALVIKAL--KEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAKELS 127
+ P+ L++KA+ EP D K G++ + ++EIA + +P AK L
Sbjct: 65 EIEVKPPTTTELLLKAVGASEPSGDPMHQKI----GDLPFEKIVEIAILKKPSLNAKTLK 120
Query: 128 GTVKEILGTCVSVGCTVDGKDPKDLQQEINDG 159
VK ILG+ S+G TVDGKDPK + +E+ +G
Sbjct: 121 AAVKTILGSARSIGITVDGKDPKQVTKEVEEG 152
>sp|C3MXH2|RL11_SULIM 50S ribosomal protein L11P OS=Sulfolobus islandicus (strain M.14.25
/ Kamchatka #1) GN=rpl11p PE=3 SV=1
Length = 170
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 14/155 (9%)
Query: 12 DVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQ 69
+ + V GG V LAP + LGL+ +GE + K E +KG+ V V + V +
Sbjct: 5 SIKIMVEGGNVKPGPPLAPTLSQLGLN---VGEVVKKLNEATSSFKGMSVPVTIEVDSNT 61
Query: 70 AKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAK 124
K + +P+ AL++K + EP D K GN++L+ VI+IA + +P K
Sbjct: 62 KKYEIKVGIPTTTALLLKEAGVSEPSGDPAH----KKIGNLSLEQVIKIAIMKKPGLTTK 117
Query: 125 ELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDG 159
L VK +LGT S+G TV+ KDPK+L +E+ +G
Sbjct: 118 SLKAAVKSMLGTAKSIGVTVENKDPKELVKEVEEG 152
>sp|C3N7D9|RL11_SULIY 50S ribosomal protein L11P OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=rpl11p PE=3 SV=1
Length = 170
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 82/155 (52%), Gaps = 14/155 (9%)
Query: 12 DVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQ 69
+ + V GG V LAP + LGL+ +GE + K E +KG+ V V + V +
Sbjct: 5 SIKIMVEGGNVKPGPPLAPTLSQLGLN---VGEVVKKLNEATSSFKGMSVPVTIEVDSNT 61
Query: 70 AKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAK 124
K + +P+ AL++K EP D K GN++L+ VI+IA + +P K
Sbjct: 62 KKYEIKVGIPTTTALLLKEAGASEPSGDPAH----KKIGNLSLEQVIKIAIMKKPGLTTK 117
Query: 125 ELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDG 159
L VK +LGT S+G TV+ KDPK+L +E+ +G
Sbjct: 118 SLKAAVKSMLGTAKSIGVTVENKDPKELVKEVEEG 152
>sp|C3MR83|RL11_SULIL 50S ribosomal protein L11P OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=rpl11p PE=3 SV=1
Length = 170
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 82/155 (52%), Gaps = 14/155 (9%)
Query: 12 DVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQ 69
+ + V GG V LAP + LGL+ +GE + K E +KG+ V V + V +
Sbjct: 5 SIKIMVEGGNVKPGPPLAPTLSQLGLN---VGEVVKKLNEATSSFKGMSVPVTIEVDSNT 61
Query: 70 AKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAK 124
K + +P+ AL++K EP D K GN++L+ VI+IA + +P K
Sbjct: 62 KKYEIKVGIPTTTALLLKEAGASEPSGDPAH----KKIGNLSLEQVIKIAIMKKPGLTTK 117
Query: 125 ELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDG 159
L VK +LGT S+G TV+ KDPK+L +E+ +G
Sbjct: 118 SLKAAVKSMLGTAKSIGVTVENKDPKELVKEVEEG 152
>sp|C4KIJ7|RL11_SULIK 50S ribosomal protein L11P OS=Sulfolobus islandicus (strain M.16.4
/ Kamchatka #3) GN=rpl11p PE=3 SV=1
Length = 170
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 82/155 (52%), Gaps = 14/155 (9%)
Query: 12 DVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQ 69
+ + V GG V LAP + LGL+ +GE + K E +KG+ V V + V +
Sbjct: 5 SIKIMVEGGNVKPGPPLAPTLSQLGLN---VGEVVKKLNEATSSFKGMSVPVTIEVDSNT 61
Query: 70 AKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAK 124
K + +P+ AL++K EP D K GN++L+ VI+IA + +P K
Sbjct: 62 KKYEIKVGIPTTTALLLKEAGASEPSGDPAH----KKIGNLSLEQVIKIAIMKKPGLTTK 117
Query: 125 ELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDG 159
L VK +LGT S+G TV+ KDPK+L +E+ +G
Sbjct: 118 SLKAAVKSMLGTAKSIGVTVENKDPKELVKEVEEG 152
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.133 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,014,191
Number of Sequences: 539616
Number of extensions: 2365072
Number of successful extensions: 8129
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 504
Number of HSP's that attempted gapping in prelim test: 7708
Number of HSP's gapped (non-prelim): 763
length of query: 166
length of database: 191,569,459
effective HSP length: 109
effective length of query: 57
effective length of database: 132,751,315
effective search space: 7566824955
effective search space used: 7566824955
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)