Query 031099
Match_columns 166
No_of_seqs 16 out of 18
Neff 2.2
Searched_HMMs 13730
Date Mon Mar 25 14:30:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031099.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031099hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1rbli_ d.73.1.1 (I:) Ribulose 68.7 1.7 0.00012 30.7 3.0 51 69-120 7-83 (109)
2 d2fnaa1 a.4.5.11 (A:284-356) H 49.3 4.4 0.00032 26.9 2.2 30 82-111 35-71 (73)
3 d1svdm1 d.73.1.1 (M:3-110) Rib 46.3 6.5 0.00047 27.5 2.8 49 71-120 9-83 (108)
4 d1o04a_ c.82.1.1 (A:) Aldehyde 42.3 5.4 0.00039 32.0 2.1 90 74-163 39-138 (494)
5 d1wdds_ d.73.1.1 (S:) Ribulose 41.0 8.4 0.00061 27.5 2.8 26 75-100 13-38 (122)
6 d2j9ua1 a.24.28.1 (A:148-241) 37.4 9.4 0.00068 26.3 2.4 20 133-152 5-24 (94)
7 d2pq6a1 c.87.1.10 (A:8-480) (I 36.1 17 0.0012 25.7 3.8 22 120-141 431-452 (473)
8 d1o6ba_ c.26.1.3 (A:) Phosphop 33.2 22 0.0016 22.5 3.7 39 80-120 123-162 (163)
9 d1bxni_ d.73.1.1 (I:) Ribulose 30.8 16 0.0012 26.1 2.9 45 76-120 7-77 (129)
10 d1rrqa1 a.96.1.2 (A:9-229) Cat 30.1 7.6 0.00056 28.3 1.0 71 84-160 42-114 (221)
11 d1keaa_ a.96.1.2 (A:) Thymine- 29.7 6.9 0.0005 28.7 0.7 73 82-157 45-120 (217)
12 d2abka_ a.96.1.1 (A:) Endonucl 29.6 5.9 0.00043 29.0 0.3 92 55-157 22-116 (211)
13 d1li5a1 a.27.1.1 (A:316-402) C 29.2 59 0.0043 20.0 5.9 13 150-162 70-82 (87)
14 d1ky8a_ c.82.1.1 (A:) Non-phos 28.0 21 0.0016 28.1 3.5 79 75-153 41-126 (499)
15 d1bwvs_ d.73.1.1 (S:) Ribulose 26.2 24 0.0017 25.6 3.1 45 76-120 7-77 (138)
16 d1gk8i_ d.73.1.1 (I:) Ribulose 25.4 22 0.0016 25.7 2.8 27 75-101 13-39 (126)
17 d1zoda1 c.67.1.4 (A:3-433) Dia 24.9 1E+02 0.0074 23.3 6.9 60 76-139 54-124 (431)
18 d1orna_ a.96.1.1 (A:) Endonucl 24.7 8.3 0.0006 28.0 0.3 72 84-158 44-118 (214)
19 d1htaa_ a.22.1.2 (A:) Archaeal 22.1 75 0.0054 18.7 5.1 41 101-147 2-42 (68)
20 d1a4sa_ c.82.1.1 (A:) Aldehyde 21.5 39 0.0028 26.9 3.9 55 75-129 47-107 (503)
21 d1szqa_ e.44.1.1 (A:) 2-methyl 21.3 34 0.0025 26.8 3.5 19 97-115 13-31 (473)
22 d1szaa_ a.118.9.4 (A:) PCF11 p 21.3 47 0.0034 22.4 3.8 36 83-119 96-139 (144)
23 d1ez0a_ c.82.1.1 (A:) Aldehyde 20.5 22 0.0016 28.5 2.1 69 79-147 19-103 (504)
24 d2a7ka1 c.14.1.3 (A:1-230) Car 20.2 35 0.0026 24.1 3.0 50 84-139 180-229 (230)
25 d1qlsa_ a.39.1.2 (A:) Calcycli 20.0 88 0.0064 20.3 4.9 54 89-142 30-89 (95)
No 1
>d1rbli_ d.73.1.1 (I:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Synechococcus sp., strain pcc 6301 [TaxId: 1131]}
Probab=68.71 E-value=1.7 Score=30.75 Aligned_cols=51 Identities=22% Similarity=0.450 Sum_probs=39.6
Q ss_pred ccccccccCCCCCCCCCHHHHHHHHHHHHccc-----------------C--CCc-------hhHHHHHHhhhcccCC
Q 031099 69 CNRSFSEDVAHMPVIRDPEIQRAFKDLMAADW-----------------G--ELP-------ASVIHDAKSALSRNND 120 (166)
Q Consensus 69 ~~R~fS~d~~hlP~i~Dpei~~afKdLmAasW-----------------~--elp-------~svv~~akkalSk~tD 120 (166)
..|.| |+.|-||+++|.+|.+-...|++-.| . .|| +.|+.+.+.|++...+
T Consensus 7 ~~~~~-eTfSyLP~Ltd~~I~~QV~yll~qGw~i~iE~ad~~~~~~~yW~mwklPmf~~~d~~~Vl~ele~c~~~~p~ 83 (109)
T d1rbli_ 7 KERRF-ETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFNEHSNPEEFYWTMWKLPLFACAAPQQVLDEVRECRSEYGD 83 (109)
T ss_dssp CCCCC-STTTTSSCCCHHHHHHHHHHHHHHTCEEEEEEESCCCTTCCCCEECSSCCTTCCCHHHHHHHHHHHHHHCTT
T ss_pred CCccc-cccccCCCCCHHHHHHHHHHHHhCCCceeEEEccCCCccceeeeecccCcccCCCHHHHHHHHHHHHHhCCc
Confidence 34667 69999999999999999999998654 4 666 4577777777776543
No 2
>d2fnaa1 a.4.5.11 (A:284-356) Hypothetical protein SSO1545, C-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=49.31 E-value=4.4 Score=26.85 Aligned_cols=30 Identities=27% Similarity=0.295 Sum_probs=25.2
Q ss_pred CCCCHHHHHHHHHHHHccc-------CCCchhHHHHH
Q 031099 82 VIRDPEIQRAFKDLMAADW-------GELPASVIHDA 111 (166)
Q Consensus 82 ~i~Dpei~~afKdLmAasW-------~elp~svv~~a 111 (166)
.|.|+.+.+.++.|+--+| +.|||.|+..|
T Consensus 35 ~I~d~~ls~lL~nL~k~~~iek~~~~Y~i~DPv~~~a 71 (73)
T d2fnaa1 35 EISDSEIYNYLTQLTKHSWIIKEGEKYCPSEPLISLA 71 (73)
T ss_dssp CCCHHHHHHHHHHHHHTTSEEESSSCEEESSHHHHHH
T ss_pred CCChHHHHHHHHHHHHcCceeecCCeeccCcHHHHHh
Confidence 5889999999999999999 45788887654
No 3
>d1svdm1 d.73.1.1 (M:3-110) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Halothiobacillus neapolitanus [TaxId: 927]}
Probab=46.35 E-value=6.5 Score=27.54 Aligned_cols=49 Identities=20% Similarity=0.419 Sum_probs=37.5
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHcccC-------------------CCc-------hhHHHHHHhhhcccCC
Q 031099 71 RSFSEDVAHMPVIRDPEIQRAFKDLMAADWG-------------------ELP-------ASVIHDAKSALSRNND 120 (166)
Q Consensus 71 R~fS~d~~hlP~i~Dpei~~afKdLmAasW~-------------------elp-------~svv~~akkalSk~tD 120 (166)
+.| |+.+-||+++|-+|.+-...|++-.|. .|| +.|+.+++.|++...+
T Consensus 9 ~~~-eTfSyLP~Ltde~I~~QV~yll~qGw~~~~E~~d~~~~r~~yW~mwklPmf~~~d~~~Vl~Ele~c~~~~p~ 83 (108)
T d1svdm1 9 LKY-ETFSYLPPMNAERIRAQIKYAIAQGWSPGIEHVEVKNSMNQYWYMWKLPFFGEQNVDNVLAEIEACRSAYPT 83 (108)
T ss_dssp CCC-STTTTSCCCCHHHHHHHHHHHHHTTCEEEEEEECGGGTTCSCCEEESCCCTTCCCHHHHHHHHHHHHHHSTT
T ss_pred ccc-cccccCCCCCHHHHHHHHHHHHHCCCEeeEeecccCCCcCceeeecCCCCcCCCcHHHHHHHHHHHHHHCCC
Confidence 444 488999999999999999999987653 454 4677777777765443
No 4
>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]}
Probab=42.31 E-value=5.4 Score=31.96 Aligned_cols=90 Identities=14% Similarity=0.133 Sum_probs=63.3
Q ss_pred cccCCCCCCCCCHHHHHHHHHHHHc-----ccCCCchh----HHHHHHhhhcccCCchhHHHHHHHHHHHHHH-HHHHHH
Q 031099 74 SEDVAHMPVIRDPEIQRAFKDLMAA-----DWGELPAS----VIHDAKSALSRNNDDKAGQEVLKNVFSAAEA-VEEFIG 143 (166)
Q Consensus 74 S~d~~hlP~i~Dpei~~afKdLmAa-----sW~elp~s----vv~~akkalSk~tDDkAGqeaLknvfRAAeA-vEeFgG 143 (166)
.+.+..+|.-+..||..|++.--++ .|..+|.. ++..+...|.++.|+.+--+.+..=---.|+ .+|...
T Consensus 39 g~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~l~~~~eela~~~~~E~GK~~~ea~~~ev~~ 118 (494)
T d1o04a_ 39 GEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDM 118 (494)
T ss_dssp TEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcchhhhhhhHHHH
Confidence 3456778889999999988765554 59999985 8888888899988888776666552222344 356667
Q ss_pred HHHHHhhhhhhhcCCCcccc
Q 031099 144 IIMNIKMEFDDEIGLSECKT 163 (166)
Q Consensus 144 iL~sLrmeiDDl~GlSGEn~ 163 (166)
.+..++.-.+..-.+.|+..
T Consensus 119 ~~~~~~~~a~~~~~~~~~~~ 138 (494)
T d1o04a_ 119 VLKCLRYYAGWADKYHGKTI 138 (494)
T ss_dssp HHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHHHHHHhcCcee
Confidence 77777776666666665543
No 5
>d1wdds_ d.73.1.1 (S:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Rice (Oryza sativa) [TaxId: 4530]}
Probab=41.02 E-value=8.4 Score=27.52 Aligned_cols=26 Identities=15% Similarity=0.512 Sum_probs=24.4
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHccc
Q 031099 75 EDVAHMPVIRDPEIQRAFKDLMAADW 100 (166)
Q Consensus 75 ~d~~hlP~i~Dpei~~afKdLmAasW 100 (166)
|+.|-||+++|-+|.+-..-|++--|
T Consensus 13 ETfSyLP~ltd~qI~~QI~yll~qGw 38 (122)
T d1wdds_ 13 ETLSYLPPLTVEDLLKQIEYLLRSKW 38 (122)
T ss_dssp STTTTSSCCCHHHHHHHHHHHHHTTC
T ss_pred eeeccCCCCCHHHHHHHHHHHHHCCC
Confidence 58899999999999999999999877
No 6
>d2j9ua1 a.24.28.1 (A:148-241) Vacuolar protein sorting-associated protein 28, VPS28 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=37.39 E-value=9.4 Score=26.25 Aligned_cols=20 Identities=30% Similarity=0.562 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHhhhh
Q 031099 133 SAAEAVEEFIGIIMNIKMEF 152 (166)
Q Consensus 133 RAAeAvEeFgGiL~sLrmei 152 (166)
-.||+++-|..++++||+.+
T Consensus 5 ~Vae~~~~FIT~mDaLkL~~ 24 (94)
T d2j9ua1 5 YVAEATGNFITVMDALKLNY 24 (94)
T ss_dssp HHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhhcC
Confidence 35899999999999999865
No 7
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}
Probab=36.13 E-value=17 Score=25.66 Aligned_cols=22 Identities=14% Similarity=0.249 Sum_probs=12.1
Q ss_pred CchhHHHHHHHHHHHHHHHHHH
Q 031099 120 DDKAGQEVLKNVFSAAEAVEEF 141 (166)
Q Consensus 120 DDkAGqeaLknvfRAAeAvEeF 141 (166)
+|..|++.-+|+=+..+.+++-
T Consensus 431 ~d~~~~~~r~~a~~l~~~~~~a 452 (473)
T d2pq6a1 431 AGDKGKKMKQKAMELKKKAEEN 452 (473)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHHHHHHHH
Confidence 3444566666666655555543
No 8
>d1o6ba_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Bacillus subtilis [TaxId: 1423]}
Probab=33.24 E-value=22 Score=22.47 Aligned_cols=39 Identities=8% Similarity=0.187 Sum_probs=30.8
Q ss_pred CCCCCCHHHHHHHHHHHHcccCC-CchhHHHHHHhhhcccCC
Q 031099 80 MPVIRDPEIQRAFKDLMAADWGE-LPASVIHDAKSALSRNND 120 (166)
Q Consensus 80 lP~i~Dpei~~afKdLmAasW~e-lp~svv~~akkalSk~tD 120 (166)
...||--+|++.++ ...+|.. +|++|.+..|+...++++
T Consensus 123 ~~~ISST~IR~~i~--~g~~i~~lVP~~V~~yI~e~~~~~~~ 162 (163)
T d1o6ba_ 123 YSFLSSSIVKEVAR--YDGSVSEFVPPEVELALQQKFRQGGS 162 (163)
T ss_dssp TTTCCHHHHHHHHH--TTCCCTTTSCHHHHHHHHHHHHSCSC
T ss_pred hhccCHHHHHHHHH--cCCChHHhCCHHHHHHHHHHHhccCC
Confidence 45688899998775 3667888 599999999988887653
No 9
>d1bxni_ d.73.1.1 (I:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Alcaligenes eutrophus [TaxId: 106590]}
Probab=30.78 E-value=16 Score=26.10 Aligned_cols=45 Identities=16% Similarity=0.393 Sum_probs=35.7
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHccc-----------------C--CC-------chhHHHHHHhhhcccCC
Q 031099 76 DVAHMPVIRDPEIQRAFKDLMAADW-----------------G--EL-------PASVIHDAKSALSRNND 120 (166)
Q Consensus 76 d~~hlP~i~Dpei~~afKdLmAasW-----------------~--el-------p~svv~~akkalSk~tD 120 (166)
..+-||+++|-+|.+-+..|++-.| . .| +..|+.+++.|++...+
T Consensus 7 tfSyLP~Ltd~~I~~QV~yll~qG~~i~iE~ad~r~~r~~yW~mw~lPmf~~~d~~~Vl~ele~c~~e~p~ 77 (129)
T d1bxni_ 7 TFSFLPELTDEQITKQLEYCLNQGWAVGLEYTDDPHPRNTYWEMFGLPMFDLRDAAGILMEINNARNTFPN 77 (129)
T ss_dssp BTTTSSCCCHHHHHHHHHHHHHHTCEEEEEEESCCCTTCCCCEESSSCBTTCCCHHHHHHHHHHHHHHCSS
T ss_pred eeccCCCCCHHHHHHHHHHHHHCCCEeeEEEecCcCcccchhhccccccccCCCHHHHHHHHHHHHHHCCc
Confidence 4568999999999999999998765 3 55 36788888888876554
No 10
>d1rrqa1 a.96.1.2 (A:9-229) Catalytic domain of MutY {Bacillus stearothermophilus [TaxId: 1422]}
Probab=30.07 E-value=7.6 Score=28.30 Aligned_cols=71 Identities=13% Similarity=0.048 Sum_probs=42.8
Q ss_pred CCHHHHHHHHHHHHc--ccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCc
Q 031099 84 RDPEIQRAFKDLMAA--DWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSE 160 (166)
Q Consensus 84 ~Dpei~~afKdLmAa--sW~elp~svv~~akkalSk~tDDkAGqeaLknvfRAAeAvEeFgGiL~sLrmeiDDl~GlSG 160 (166)
+|.-+.++++.|+.. +|..|-..-..+.++.+...+=-. .+..-.=.+.+.+++|+|.+-..+ ++|+.|-|
T Consensus 42 ~~~~v~~~~~~L~~~~~t~~~la~a~~~~l~~~i~~~G~~~---ra~~l~~~~~~~~~~~~G~vp~~~---~~Ll~LpG 114 (221)
T d1rrqa1 42 RVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYYS---RVRNLHAAVKEVKTRYGGKVPDDP---DEFSRLKG 114 (221)
T ss_dssp CHHHHHHHHHHHHHHSCSHHHHHHSCHHHHHHHHTTSSCTH---HHHHHHHHHHHHHHHHTTCCCCSH---HHHHTSTT
T ss_pred cHHHHHHHHHHHHHhcchHHHHHhhcHHHHHhhhccchhhh---hhHHHHHHHHHHhhhcCCCCchHH---HHHHHHHH
Confidence 688899999999884 343333333455666666543322 233333346788899999655444 55555544
No 11
>d1keaa_ a.96.1.2 (A:) Thymine-DNA glycosylase {Archaeon Methanobacterium thermoformicicum [TaxId: 145262]}
Probab=29.69 E-value=6.9 Score=28.72 Aligned_cols=73 Identities=5% Similarity=0.119 Sum_probs=44.0
Q ss_pred CCCCHHHHHHHHHHHHc--ccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhhhcC
Q 031099 82 VIRDPEIQRAFKDLMAA--DWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEA-VEEFIGIIMNIKMEFDDEIG 157 (166)
Q Consensus 82 ~i~Dpei~~afKdLmAa--sW~elp~svv~~akkalSk~tDDkAGqeaLknvfRAAeA-vEeFgGiL~sLrmeiDDl~G 157 (166)
--+|..+..+++.|+.. +|..|-..=..++++.+...+=- ..--++..++|+. +|+|||.+-.-+.||-.|=|
T Consensus 45 qT~~~~v~~~~~~l~~~~pt~~~la~a~~~~l~~~i~~~G~~---~~KA~~l~~~a~~i~~~~~g~~p~~~~~L~~LpG 120 (217)
T d1keaa_ 45 RTTAGHVKKIYDKFFVKYKCFEDILKTPKSEIAKDIKEIGLS---NQRAEQLKELARVVINDYGGRVPRNRKAILDLPG 120 (217)
T ss_dssp TSCHHHHHHHHHHHHHHCCSHHHHHHSCHHHHHHHTGGGSCH---HHHHHHHHHHHHHHHHHHTTSCCSCHHHHHTSTT
T ss_pred cCcHHHHHHHHHHHHHhcccHHHHHHhhHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHh
Confidence 34789999999999875 33333333345666666653311 2244667787875 56799966554444433333
No 12
>d2abka_ a.96.1.1 (A:) Endonuclease III {Escherichia coli [TaxId: 562]}
Probab=29.56 E-value=5.9 Score=28.96 Aligned_cols=92 Identities=12% Similarity=0.130 Sum_probs=55.7
Q ss_pred CCCCCCCcccccccccccccccCCCCCCCCCHHHHHHHHHHHHc--ccCCCchhHHHHHHhhhcccCCchhHHHHHHHHH
Q 031099 55 IPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAA--DWGELPASVIHDAKSALSRNNDDKAGQEVLKNVF 132 (166)
Q Consensus 55 ~~~d~~~~~s~~~g~~R~fS~d~~hlP~i~Dpei~~afKdLmAa--sW~elp~svv~~akkalSk~tDDkAGqeaLknvf 132 (166)
.+.+.++||-.=++- ..| .--+|.-+.++++.|+.. +|..|-..-..+++++++..+=- ...-++..
T Consensus 22 ~~l~~~~p~~vli~~--iLs------qqT~~~~v~~~~~~l~~~~~t~~~la~a~~~~l~~~i~~~G~y---~~Ka~~l~ 90 (211)
T d2abka_ 22 TELNFSSPFELLIAV--LLS------AQATDVSVNKATAKLYPVANTPAAMLELGVEGVKTYIKTIGLY---NSKAENII 90 (211)
T ss_dssp CSSCCSSHHHHHHHH--HHT------TTSCHHHHHHHHHHHTTTCCSHHHHHHHHHHHHHHHHTTSTTH---HHHHHHHH
T ss_pred CCCCCCCHHHHHHHH--HHh------ccchHHHHHHHHHHHHHhccChHHHHhhhHhHhHHHHHHhhhh---hhHHHHHH
Confidence 344567787643321 122 345788999999999874 44444444456677777763321 23446777
Q ss_pred HHHH-HHHHHHHHHHHHhhhhhhhcC
Q 031099 133 SAAE-AVEEFIGIIMNIKMEFDDEIG 157 (166)
Q Consensus 133 RAAe-AvEeFgGiL~sLrmeiDDl~G 157 (166)
++|+ -+++|||.+-..+.+|-.|=|
T Consensus 91 ~~a~~i~~~~~g~~p~~~~~L~~LpG 116 (211)
T d2abka_ 91 KTCRILLEQHNGEVPEDRAALEALPG 116 (211)
T ss_dssp HHHHHHHHHTTTSCCSCHHHHHHSTT
T ss_pred HHHHHHHHHhcCchhHHHHHHHHHHh
Confidence 7777 578999976555555444433
No 13
>d1li5a1 a.27.1.1 (A:316-402) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]}
Probab=29.24 E-value=59 Score=19.97 Aligned_cols=13 Identities=23% Similarity=0.348 Sum_probs=9.7
Q ss_pred hhhhhhcCCCccc
Q 031099 150 MEFDDEIGLSECK 162 (166)
Q Consensus 150 meiDDl~GlSGEn 162 (166)
.++.+++|+-+++
T Consensus 70 ~~~~~vLGll~~~ 82 (87)
T d1li5a1 70 RKLSAVLGLLEQE 82 (87)
T ss_dssp HHHHTTTTCSCSC
T ss_pred HHHHhHcCCCCCC
Confidence 4678889987764
No 14
>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]}
Probab=27.98 E-value=21 Score=28.14 Aligned_cols=79 Identities=19% Similarity=0.215 Sum_probs=50.0
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHc---ccCCCch----hHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 031099 75 EDVAHMPVIRDPEIQRAFKDLMAA---DWGELPA----SVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMN 147 (166)
Q Consensus 75 ~d~~hlP~i~Dpei~~afKdLmAa---sW~elp~----svv~~akkalSk~tDDkAGqeaLknvfRAAeAvEeFgGiL~s 147 (166)
+-+.++|.....||..|.+..-++ +|..+|. ++...+...|.++.|+.+.-..++-=--..+|..|+...+..
T Consensus 41 ~~i~~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~etGk~~~~a~~Ev~~~i~~ 120 (499)
T d1ky8a_ 41 ATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDR 120 (499)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhhhhccccc
Confidence 346678888888888877544322 6888887 467777778888777766555443222233445566666666
Q ss_pred Hhhhhh
Q 031099 148 IKMEFD 153 (166)
Q Consensus 148 LrmeiD 153 (166)
++-..+
T Consensus 121 ~~~~a~ 126 (499)
T d1ky8a_ 121 LRLAEL 126 (499)
T ss_dssp HHGGGG
T ss_pred ccchhh
Confidence 664443
No 15
>d1bwvs_ d.73.1.1 (S:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Galdieria partita [TaxId: 83374]}
Probab=26.23 E-value=24 Score=25.59 Aligned_cols=45 Identities=16% Similarity=0.412 Sum_probs=34.6
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHcccC-------------------CCc-------hhHHHHHHhhhcccCC
Q 031099 76 DVAHMPVIRDPEIQRAFKDLMAADWG-------------------ELP-------ASVIHDAKSALSRNND 120 (166)
Q Consensus 76 d~~hlP~i~Dpei~~afKdLmAasW~-------------------elp-------~svv~~akkalSk~tD 120 (166)
..+-||+++|.+|.+-...|++-.|. .|| +.|+.+++.|++...+
T Consensus 7 tfSyLP~LtdeqI~~QV~yll~qGw~~~iE~~d~~~~r~~yW~mwklPmf~~~d~~~Vl~Ele~C~k~~p~ 77 (138)
T d1bwvs_ 7 TFSFLPDLTDEQIKKQIDYMISKKLAIGIEYTNDIHPRNAYWEIWGLPLFDVTDPAAVLFEINACRKARSN 77 (138)
T ss_dssp TTTTSCCCCHHHHHHHHHHHHHTTCEEEEEEESCCCTTCCCCEECSSCBCSCCCHHHHHHHHHHHHHHCTT
T ss_pred eeccCCCCCHHHHHHHHHHHHcCCCEeeeEeccccccccchhhccccccccCCCHHHHHHHHHHHHHHCCc
Confidence 56689999999999999999987663 553 5677777777765443
No 16
>d1gk8i_ d.73.1.1 (I:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=25.44 E-value=22 Score=25.65 Aligned_cols=27 Identities=22% Similarity=0.455 Sum_probs=25.3
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHcccC
Q 031099 75 EDVAHMPVIRDPEIQRAFKDLMAADWG 101 (166)
Q Consensus 75 ~d~~hlP~i~Dpei~~afKdLmAasW~ 101 (166)
|+.|-||+++|-+|.+-..=++.-.|.
T Consensus 13 ETfSyLPpLtdeqI~kQI~Y~i~~GW~ 39 (126)
T d1gk8i_ 13 ETFSYLPPLTDEQIAAQVDYIVANGWI 39 (126)
T ss_dssp STTTTSSCCCHHHHHHHHHHHHHTTCE
T ss_pred eecccCCCCCHHHHHHHHHHHHhcCCc
Confidence 589999999999999999999999985
No 17
>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}
Probab=24.90 E-value=1e+02 Score=23.28 Aligned_cols=60 Identities=20% Similarity=0.157 Sum_probs=42.9
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHccc----CCCchhHHHHHHhhhccc--CCc-----hhHHHHHHHHHHHHHHHH
Q 031099 76 DVAHMPVIRDPEIQRAFKDLMAADW----GELPASVIHDAKSALSRN--NDD-----KAGQEVLKNVFSAAEAVE 139 (166)
Q Consensus 76 d~~hlP~i~Dpei~~afKdLmAasW----~elp~svv~~akkalSk~--tDD-----kAGqeaLknvfRAAeAvE 139 (166)
.++| .+|+|.+|+++-+..-+ .-+.+..++-|++-+... .-| ..|-||.+++.|.|++.-
T Consensus 54 ~lGh----~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~sGseA~e~Alk~Ar~~t 124 (431)
T d1zoda1 54 VLGH----CHPEIVSVIGEYAGKLDHLFSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLVT 124 (431)
T ss_dssp TTCB----TCHHHHHHHHHHHHHCCCCCTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHHHHHHHH
T ss_pred hhcC----CCHHHHHHHHHHHhhccccccccccHHHHHHHHHHHHhCCcccceeeecccccchHHHHHHHHHHhc
Confidence 5666 68999999999887544 234566667777655432 223 469999999999999874
No 18
>d1orna_ a.96.1.1 (A:) Endonuclease III {Escherichia coli [TaxId: 562]}
Probab=24.71 E-value=8.3 Score=28.03 Aligned_cols=72 Identities=11% Similarity=0.127 Sum_probs=0.0
Q ss_pred CCHHHHHHHHHHHHc--ccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhhhcCC
Q 031099 84 RDPEIQRAFKDLMAA--DWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEA-VEEFIGIIMNIKMEFDDEIGL 158 (166)
Q Consensus 84 ~Dpei~~afKdLmAa--sW~elp~svv~~akkalSk~tDDkAGqeaLknvfRAAeA-vEeFgGiL~sLrmeiDDl~Gl 158 (166)
+|.-+.++++.|+.. +|.++-..-..+.++.+...+= .....+|..++|+- +|+|||.+-.-+.+|-.|=|.
T Consensus 44 ~~~~v~~~~~~l~~~~pt~~~la~~~~~e~~~~i~~~g~---y~~ka~~l~~~a~~i~~~~~g~vp~~~~~L~~LpGV 118 (214)
T d1orna_ 44 TDALVNKVTKRLFEKYRTPHDYIAVPLEELEQDIRSIGL---YRNKARNIQKLCAMLIDKYNGEVPRDRDELMKLPGV 118 (214)
T ss_dssp CHHHHHHHHHHHHHHCCSHHHHHSSCHHHHHHHTGGGSS---HHHHHHHHHHHHHHHHHHSTTSCCSCHHHHTTSTTC
T ss_pred hHHHHHHHHhhhhcccCchhhhhhccHHHhhhhhhhhhh---hhHHHHHHHHHhhhHHHHhCCCCCCCHHHHHhCcCc
No 19
>d1htaa_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanothermus fervidus, histone A [TaxId: 2180]}
Probab=22.14 E-value=75 Score=18.70 Aligned_cols=41 Identities=22% Similarity=0.304 Sum_probs=26.8
Q ss_pred CCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 031099 101 GELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMN 147 (166)
Q Consensus 101 ~elp~svv~~akkalSk~tDDkAGqeaLknvfRAAeAvEeFgGiL~s 147 (166)
.|||-+.|...=+ ..+..+.++|++.-+ ++++|+|-.-|..
T Consensus 2 aeLP~a~I~ri~k---~~~~~ris~ea~~~l---~~~~e~fi~~l~~ 42 (68)
T d1htaa_ 2 GELPIAPIGRIIK---NAGAERVSDDARIAL---AKVLEEMGEEIAS 42 (68)
T ss_dssp CCSCHHHHHHHHH---HTTCSCCCHHHHHHH---HHHHHHHHHHHHH
T ss_pred CcCcHHHHHHHHH---HCCcchhhHHHHHHH---HHHHHHHHHHHHH
Confidence 4688877744322 235567888887654 6778888775543
No 20
>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]}
Probab=21.48 E-value=39 Score=26.86 Aligned_cols=55 Identities=20% Similarity=0.340 Sum_probs=39.7
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHH--cccCCCchh----HHHHHHhhhcccCCchhHHHHHH
Q 031099 75 EDVAHMPVIRDPEIQRAFKDLMA--ADWGELPAS----VIHDAKSALSRNNDDKAGQEVLK 129 (166)
Q Consensus 75 ~d~~hlP~i~Dpei~~afKdLmA--asW~elp~s----vv~~akkalSk~tDDkAGqeaLk 129 (166)
+-+.++|..+..||..|+..--+ ..|..+|.. ++..+...|.++.|+.+-...+.
T Consensus 47 e~i~~v~~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~~iL~~~a~~L~~~~eela~~~~~e 107 (503)
T d1a4sa_ 47 RVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVIN 107 (503)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHh
Confidence 34567899988899888765554 369999875 67777788888877766654443
No 21
>d1szqa_ e.44.1.1 (A:) 2-methylcitrate dehydratase PrpD {Escherichia coli [TaxId: 562]}
Probab=21.30 E-value=34 Score=26.84 Aligned_cols=19 Identities=11% Similarity=0.081 Sum_probs=16.9
Q ss_pred HcccCCCchhHHHHHHhhh
Q 031099 97 AADWGELPASVIHDAKSAL 115 (166)
Q Consensus 97 AasW~elp~svv~~akkal 115 (166)
+.+|+.||+.|++.+|.++
T Consensus 13 ~~~~~~~~~~v~~~ak~~i 31 (473)
T d1szqa_ 13 VMNYEISSKVAYDTAHYCL 31 (473)
T ss_dssp HHHCCCCCHHHHHHHHHHH
T ss_pred HhcCCCCCHHHHHHHHHHH
Confidence 4689999999999999876
No 22
>d1szaa_ a.118.9.4 (A:) PCF11 protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.27 E-value=47 Score=22.40 Aligned_cols=36 Identities=11% Similarity=0.300 Sum_probs=30.1
Q ss_pred CCCHHHHHHHHHHHHcccCC--------CchhHHHHHHhhhcccC
Q 031099 83 IRDPEIQRAFKDLMAADWGE--------LPASVIHDAKSALSRNN 119 (166)
Q Consensus 83 i~Dpei~~afKdLmAasW~e--------lp~svv~~akkalSk~t 119 (166)
.-|++++..+..|+.+ |.+ .|.++++..++.|.|+.
T Consensus 96 ~~~~~~r~kl~rll~i-W~~r~~~~~~vFp~~~l~~ie~~L~~a~ 139 (144)
T d1szaa_ 96 LVDNTTRTKLINMFKL-WLNPNDTGLPLFEGSALEKIEQFLIKAS 139 (144)
T ss_dssp TSCHHHHHHHHHHHHH-HSSGGGCSSCSSCHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHHH-HhccCCCCcCCCCHHHHHHHHHHHHHhH
Confidence 4589999999998875 655 99999999999998753
No 23
>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]}
Probab=20.51 E-value=22 Score=28.48 Aligned_cols=69 Identities=20% Similarity=0.303 Sum_probs=44.3
Q ss_pred CCCCCCCHHHHHHHHHHHHc--ccCCCchhH----HHHHHhhhcccCCchhHHHHH----------HHHHHHHHHHHHHH
Q 031099 79 HMPVIRDPEIQRAFKDLMAA--DWGELPASV----IHDAKSALSRNNDDKAGQEVL----------KNVFSAAEAVEEFI 142 (166)
Q Consensus 79 hlP~i~Dpei~~afKdLmAa--sW~elp~sv----v~~akkalSk~tDDkAGqeaL----------knvfRAAeAvEeFg 142 (166)
.+|.-+..||..|+..--.+ .|.++|..- +..+...|.++.|+.+.-..+ .+|-++++-++.|.
T Consensus 19 ~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~~~a~~Ev~~~~~~~~~~a 98 (504)
T d1ez0a_ 19 AFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFA 98 (504)
T ss_dssp EEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 57777778888877765544 699999754 666677777777776654443 34445555555555
Q ss_pred HHHHH
Q 031099 143 GIIMN 147 (166)
Q Consensus 143 GiL~s 147 (166)
+.+..
T Consensus 99 ~~~~~ 103 (504)
T d1ez0a_ 99 DVVNS 103 (504)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 54443
No 24
>d2a7ka1 c.14.1.3 (A:1-230) Carbapenem biosynthes protein CarB {Pectobacterium carotovorum [TaxId: 554]}
Probab=20.23 E-value=35 Score=24.08 Aligned_cols=50 Identities=22% Similarity=0.210 Sum_probs=36.0
Q ss_pred CCHHHHHHHHHHHHcccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHH
Q 031099 84 RDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVE 139 (166)
Q Consensus 84 ~Dpei~~afKdLmAasW~elp~svv~~akkalSk~tDDkAGqeaLknvfRAAeAvE 139 (166)
.+.+++....++ |..+...|+..+...|+.+.+ .-.+.|+..+.+.+|++
T Consensus 180 ~~~~l~~~a~~~-a~~ia~~~~~a~~~~K~~l~~-----~~~~~l~~~~~~~~a~~ 229 (230)
T d2a7ka1 180 ESSALLDAAITQ-AHVMASYPASAFINTKRAVNK-----PFIHLLEQTRDASKAVH 229 (230)
T ss_dssp CHHHHHHHHHHH-HHHHHTSCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHC
T ss_pred ChHHHHHHHHHH-HHHHHcCCHHHHHHHHHHHHH-----HHhccHHHHHHHHHHhC
Confidence 456666666664 677888999999999999865 44556677777777764
No 25
>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}
Probab=20.03 E-value=88 Score=20.30 Aligned_cols=54 Identities=19% Similarity=0.213 Sum_probs=39.0
Q ss_pred HHHHHHHHHccc-----CCCchhHHHHHHhhhcccCCchhH-HHHHHHHHHHHHHHHHHH
Q 031099 89 QRAFKDLMAADW-----GELPASVIHDAKSALSRNNDDKAG-QEVLKNVFSAAEAVEEFI 142 (166)
Q Consensus 89 ~~afKdLmAasW-----~elp~svv~~akkalSk~tDDkAG-qeaLknvfRAAeAvEeFg 142 (166)
++-||+||-..- ..-++..+...-+.|-+|+|++.+ +|=+.=|++.|-||-+|.
T Consensus 30 k~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~la~~ch~~~ 89 (95)
T d1qlsa_ 30 KTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGLAIACHDSF 89 (95)
T ss_dssp HHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHHHHHH
Confidence 455677775411 122445577888889999998877 778888999999998874
Done!