Query 031101
Match_columns 165
No_of_seqs 57 out of 59
Neff 4.0
Searched_HMMs 13730
Date Mon Mar 25 14:33:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031101.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031101hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1hx0a2 c.1.8.1 (A:1-403) Anim 22.4 16 0.0012 27.8 1.7 30 50-80 63-92 (403)
2 d1g94a2 c.1.8.1 (A:1-354) Bact 20.6 19 0.0014 27.0 1.7 30 50-80 51-80 (354)
3 d1gcya2 c.1.8.1 (A:1-357) G4-a 20.6 21 0.0016 26.2 2.0 29 51-80 80-108 (357)
4 d1vlpa2 c.1.17.2 (A:150-415) N 20.3 7 0.00051 30.6 -1.0 43 13-55 41-86 (266)
5 d1jaea2 c.1.8.1 (A:1-378) Anim 16.8 16 0.0012 27.6 0.5 30 50-80 61-90 (378)
6 d1ht6a2 c.1.8.1 (A:1-347) Plan 13.2 38 0.0028 24.2 1.7 22 59-80 63-84 (347)
7 d1eh9a3 c.1.8.1 (A:91-490) Gly 12.4 45 0.0033 24.7 2.0 31 50-80 63-93 (400)
8 d1wu9a1 a.245.1.1 (A:191-249) 9.9 96 0.007 19.0 2.6 21 15-35 13-33 (59)
9 d1ua7a2 c.1.8.1 (A:4-347) Bact 9.6 35 0.0026 25.8 0.4 30 51-80 61-90 (344)
10 d1mxga2 c.1.8.1 (A:1-361) Bact 9.0 55 0.004 24.5 1.3 21 60-80 82-102 (361)
No 1
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=22.43 E-value=16 Score=27.81 Aligned_cols=30 Identities=13% Similarity=0.297 Sum_probs=23.7
Q ss_pred CCceeeccCCCCCCCchHHHHHHHHhhhccC
Q 031101 50 LPKSFSARSALSSESDDYGELVRAASVRSMG 80 (165)
Q Consensus 50 lPrSfS~~s~r~~~ddd~~ELvRAAS~R~~g 80 (165)
.|..|.+++ +-++.+||++||.+|=++++.
T Consensus 63 ~~~dY~v~~-~~Gt~~dfk~Lv~~aH~~GI~ 92 (403)
T d1hx0a2 63 QPVSYKLCT-RSGNENEFRDMVTRCNNVGVR 92 (403)
T ss_dssp SBSCSCSCB-TTBCHHHHHHHHHHHHHTTCE
T ss_pred cCCCCccCC-CCCCHHHHHHHHHHHHhcCCE
Confidence 566677654 668899999999999999654
No 2
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]}
Probab=20.60 E-value=19 Score=26.96 Aligned_cols=30 Identities=17% Similarity=0.309 Sum_probs=22.6
Q ss_pred CCceeeccCCCCCCCchHHHHHHHHhhhccC
Q 031101 50 LPKSFSARSALSSESDDYGELVRAASVRSMG 80 (165)
Q Consensus 50 lPrSfS~~s~r~~~ddd~~ELvRAAS~R~~g 80 (165)
-|..|.+++ +-++.+||++||.+|-++++.
T Consensus 51 ~~~dy~vd~-~~Gt~~dfk~LV~~aH~~GI~ 80 (354)
T d1g94a2 51 QPVSYELQS-RGGNRAQFIDMVNRCSAAGVD 80 (354)
T ss_dssp SBSCSCSCB-TTBCHHHHHHHHHHHHHTTCE
T ss_pred CCCcceeCC-CCCCHHHHHHHHHHHhccCce
Confidence 455676543 457789999999999999653
No 3
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]}
Probab=20.60 E-value=21 Score=26.21 Aligned_cols=29 Identities=7% Similarity=0.001 Sum_probs=21.7
Q ss_pred CceeeccCCCCCCCchHHHHHHHHhhhccC
Q 031101 51 PKSFSARSALSSESDDYGELVRAASVRSMG 80 (165)
Q Consensus 51 PrSfS~~s~r~~~ddd~~ELvRAAS~R~~g 80 (165)
|..|.+++ +-++.+||++||++|=+|.+.
T Consensus 80 ~~dy~vd~-~~Gt~~df~~LV~~aH~~GI~ 108 (357)
T d1gcya2 80 WHDFNKNG-RYGSDAQLRQAASALGGAGVK 108 (357)
T ss_dssp CSSSCSCS-SSCCHHHHHHHHHHHHHTTCE
T ss_pred hhhcccCc-cCCCHHHHHHHHHHHHhcCCe
Confidence 33465543 457789999999999999654
No 4
>d1vlpa2 c.1.17.2 (A:150-415) Nicotinate phosphoribosyltransferase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.29 E-value=7 Score=30.65 Aligned_cols=43 Identities=14% Similarity=0.115 Sum_probs=32.5
Q ss_pred hhhhhHHHHHhhhhhHHHHhHHHhcCCCC---cCCCCCCCCCceee
Q 031101 13 RFVMLPIRALGKARDFYVRSMINCAEGRT---YGQPMGGTLPKSFS 55 (165)
Q Consensus 13 ri~~aP~R~L~kARD~YVrsmt~Ca~~~~---~G~P~~~~lPrSfS 55 (165)
+++..|...|.-||..|+-+..++|.-.. ||-|...|+|.+|-
T Consensus 41 ~v~q~~~~~~~~~raa~iggf~gTSNv~aa~~~gip~~GTmAHs~v 86 (266)
T d1vlpa2 41 LIMQGIMKAVNGNPDRNKSLLLGTSNILFAKKYGVKPIGTVAHEWV 86 (266)
T ss_dssp HHHHHHHHHHHHSHHHHTTTEEEESBHHHHHHHTCCBCCCCCHHHH
T ss_pred HHHHHHHHHHHhhhHHhcCcCccccHHHHHHHcCCCCccchHHHHH
Confidence 45677888999999999987777766543 68777777777763
No 5
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]}
Probab=16.77 E-value=16 Score=27.60 Aligned_cols=30 Identities=13% Similarity=0.299 Sum_probs=23.2
Q ss_pred CCceeeccCCCCCCCchHHHHHHHHhhhccC
Q 031101 50 LPKSFSARSALSSESDDYGELVRAASVRSMG 80 (165)
Q Consensus 50 lPrSfS~~s~r~~~ddd~~ELvRAAS~R~~g 80 (165)
.|..|.+++ +-++.+||++||.+|=+|++.
T Consensus 61 ~~~dY~id~-~~Gt~~df~~LV~~aH~~GI~ 90 (378)
T d1jaea2 61 QPVSYIINT-RSGDESAFTDMTRRCNDAGVR 90 (378)
T ss_dssp SBCCSCSEE-TTEEHHHHHHHHHHHHHTTCE
T ss_pred CCccceeCC-CCCCHHHHHHHHHHHHhcCce
Confidence 456676643 567789999999999999654
No 6
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]}
Probab=13.25 E-value=38 Score=24.21 Aligned_cols=22 Identities=9% Similarity=0.131 Sum_probs=18.0
Q ss_pred CCCCCCchHHHHHHHHhhhccC
Q 031101 59 ALSSESDDYGELVRAASVRSMG 80 (165)
Q Consensus 59 ~r~~~ddd~~ELvRAAS~R~~g 80 (165)
++-++.|||++||++|-+|++.
T Consensus 63 ~~~G~~~~f~~lv~~~H~~gi~ 84 (347)
T d1ht6a2 63 SKYGNAAELKSLIGALHGKGVQ 84 (347)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCE
T ss_pred ccCCCHHHHHHHHHHHhhcceE
Confidence 3456779999999999999654
No 7
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]}
Probab=12.36 E-value=45 Score=24.71 Aligned_cols=31 Identities=16% Similarity=0.168 Sum_probs=21.8
Q ss_pred CCceeeccCCCCCCCchHHHHHHHHhhhccC
Q 031101 50 LPKSFSARSALSSESDDYGELVRAASVRSMG 80 (165)
Q Consensus 50 lPrSfS~~s~r~~~ddd~~ELvRAAS~R~~g 80 (165)
-|..|-.=.++-++.|||++||++|=+|.+.
T Consensus 63 ~~~d~~~vd~~~Gt~~dlk~lv~~~h~~gi~ 93 (400)
T d1eh9a3 63 DGVYLYAVQNSYGGPEGFRKLVDEAHKKGLG 93 (400)
T ss_dssp TCCCTTCBCSTTCCHHHHHHHHHHHHHTTCE
T ss_pred CCCCCCCcCcccCCHHHHHHHHHHHHhcCCc
Confidence 3455433334557789999999999999543
No 8
>d1wu9a1 a.245.1.1 (A:191-249) Microtubule-associated protein EB1, C-terminal dimerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.94 E-value=96 Score=18.97 Aligned_cols=21 Identities=38% Similarity=0.662 Sum_probs=16.2
Q ss_pred hhhHHHHHhhhhhHHHHhHHH
Q 031101 15 VMLPIRALGKARDFYVRSMIN 35 (165)
Q Consensus 15 ~~aP~R~L~kARD~YVrsmt~ 35 (165)
++.-+..|-|-||||-....+
T Consensus 13 lk~~v~~lEkERdFYF~KLRd 33 (59)
T d1wu9a1 13 LKLTVEDLEKERDFYFGKLRN 33 (59)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 356778899999999876543
No 9
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]}
Probab=9.63 E-value=35 Score=25.84 Aligned_cols=30 Identities=17% Similarity=0.319 Sum_probs=21.5
Q ss_pred CceeeccCCCCCCCchHHHHHHHHhhhccC
Q 031101 51 PKSFSARSALSSESDDYGELVRAASVRSMG 80 (165)
Q Consensus 51 PrSfS~~s~r~~~ddd~~ELvRAAS~R~~g 80 (165)
|..|-.-.++-++.+||++||.+|=+|++.
T Consensus 61 ~~dy~~vd~~~Gt~~df~~LV~~aH~~Gi~ 90 (344)
T d1ua7a2 61 PTSYQIGNRYLGTEQEFKEMCAAAEEYGIK 90 (344)
T ss_dssp EEEEEEEETTTEEHHHHHHHHHHHHTTTCE
T ss_pred cccCCCCCCCCCCHHHHHHHHHHhccccee
Confidence 344444444557789999999999988543
No 10
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=8.96 E-value=55 Score=24.46 Aligned_cols=21 Identities=10% Similarity=0.156 Sum_probs=17.5
Q ss_pred CCCCCchHHHHHHHHhhhccC
Q 031101 60 LSSESDDYGELVRAASVRSMG 80 (165)
Q Consensus 60 r~~~ddd~~ELvRAAS~R~~g 80 (165)
+-++.+||++||.+|=+|++.
T Consensus 82 ~~Gt~~d~~~LV~~aH~~Gik 102 (361)
T d1mxga2 82 RFGSKEELVRLIQTAHAYGIK 102 (361)
T ss_dssp SSCCHHHHHHHHHHHHHTTCE
T ss_pred CCCCHHHHHHHHHHHHHCCCE
Confidence 346788999999999999653
Done!