BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031107
(165 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|358248215|ref|NP_001240096.1| uncharacterized protein LOC100780886 [Glycine max]
gi|255637280|gb|ACU18970.1| unknown [Glycine max]
Length = 160
Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 118/166 (71%), Positives = 133/166 (80%), Gaps = 7/166 (4%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSA-GTSVKKR 59
M RR+ SS LK LA + S P + S A+R +SR+FS S T++KK+
Sbjct: 1 MLRRLLSSHLKT----LAATASSSTPRSASAAARFAALS--RSSRYFSTQSEDATAIKKK 54
Query: 60 VEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEG 119
VEDV P+ATGHEREEL+AELEG+NILEID+P GPFGTK+APAVVKSYYDKRIVGCPGGEG
Sbjct: 55 VEDVMPIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEG 114
Query: 120 EDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
EDEHDVVWFWLEK KPHECPVC+QYFVLEVVGPGG PDGHGDDDHH
Sbjct: 115 EDEHDVVWFWLEKDKPHECPVCAQYFVLEVVGPGGSPDGHGDDDHH 160
>gi|388510728|gb|AFK43430.1| unknown [Medicago truncatula]
Length = 156
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/166 (67%), Positives = 133/166 (80%), Gaps = 12/166 (7%)
Query: 1 MWRRIC-SSQLKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVKKR 59
M RR+ SSQLK + R +P S + SL+SR F+++ S+D + T +KK+
Sbjct: 1 MLRRLLISSQLKT-------LTSRRSP--SSAVAVSLLSRHHFSTQ--SSDDSTTGIKKK 49
Query: 60 VEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEG 119
VEDV P+ATGHEREE++A+LEG++ILEID+P GPFGTK+APAVVKSYYDKRIVGCPGGEG
Sbjct: 50 VEDVVPIATGHEREEIQAQLEGRDILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEG 109
Query: 120 EDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
EDEHDVVWFWLEK KPHECPVC+QYFVLEVVGPGG P GHGD DHH
Sbjct: 110 EDEHDVVWFWLEKDKPHECPVCAQYFVLEVVGPGGSPYGHGDPDHH 155
>gi|351721897|ref|NP_001237225.1| uncharacterized protein LOC100527520 [Glycine max]
gi|255632532|gb|ACU16616.1| unknown [Glycine max]
Length = 153
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/166 (65%), Positives = 131/166 (78%), Gaps = 14/166 (8%)
Query: 1 MWRRI-CSSQLKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVKKR 59
MWRR+ SS LKA L+ P P +A+++L++R HF+A S +S+KKR
Sbjct: 1 MWRRLFSSSNLKALHTTLS-------PSRPRLAAQTLLAR------HFTAQSGASSLKKR 47
Query: 60 VEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEG 119
VEDV P+ATGHEREE++A+LEG++ILEI++P GPFGTK+APAVVKSY+D+RIVGCPG EG
Sbjct: 48 VEDVVPIATGHEREEIQADLEGRDILEINHPVGPFGTKEAPAVVKSYFDRRIVGCPGDEG 107
Query: 120 EDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
E EHDVVWFWLEKGKP ECPVCSQYF LEVVGPGG P GHGD DHH
Sbjct: 108 EGEHDVVWFWLEKGKPIECPVCSQYFKLEVVGPGGDPYGHGDHDHH 153
>gi|449467060|ref|XP_004151243.1| PREDICTED: cytochrome c oxidase subunit 5b-2, mitochondrial-like
[Cucumis sativus]
Length = 174
Score = 218 bits (555), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 115/174 (66%), Positives = 137/174 (78%), Gaps = 10/174 (5%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSAPVN-----PSIASRSLIS----RPLFASRHFSADS 51
MWRR+ SS LK+ + + SAP+ P +A+ S +S PLFA RH+++DS
Sbjct: 1 MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFA-RHYASDS 59
Query: 52 AGTSVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRI 111
A T +KK VEDV P+ATGHEREELEA LEGK+IL+I++P GPFGTK+APAV+KSYYD+RI
Sbjct: 60 ADTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTKEAPAVIKSYYDERI 119
Query: 112 VGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
VGCPGGE EDEHDV+WF L KG PHECPVCSQYFVLEVVGPGG PDG+GDDDHH
Sbjct: 120 VGCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYGDDDHH 173
>gi|363808204|ref|NP_001241975.1| uncharacterized protein LOC100801050 [Glycine max]
gi|255633872|gb|ACU17297.1| unknown [Glycine max]
Length = 152
Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 109/166 (65%), Positives = 130/166 (78%), Gaps = 15/166 (9%)
Query: 1 MWRRI-CSSQLKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVKKR 59
MWRR+ SS LK+ AL+ P P +A+ PL +RH +A S +SVK+R
Sbjct: 1 MWRRLFSSSNLKSLHTALS-------PSRPRLAA------PLL-TRHVTAHSGASSVKRR 46
Query: 60 VEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEG 119
VEDV P+ATGH+REE++A+LEG++ILEI++P GPFGTK+APAVVKSY+D+RIVGCPG EG
Sbjct: 47 VEDVVPIATGHKREEIQADLEGRDILEINHPVGPFGTKEAPAVVKSYFDRRIVGCPGDEG 106
Query: 120 EDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
EDEHDVVWFWLEKGKP ECPVCSQYF LEVVGPGG P GHGD DHH
Sbjct: 107 EDEHDVVWFWLEKGKPKECPVCSQYFKLEVVGPGGDPYGHGDHDHH 152
>gi|106879617|emb|CAJ38392.1| cytochrome c oxidase subunit 5b [Plantago major]
Length = 162
Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 108/166 (65%), Positives = 127/166 (76%), Gaps = 10/166 (6%)
Query: 1 MWRRICSS-QLKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVKKR 59
MWRR+ ++ + + LA S RS N + A+ + R FA F+ +S +V KR
Sbjct: 5 MWRRVAATANIHLRTLA----SVRSTLPNRTAAAPESL-RSSFAL--FNTESG--NVAKR 55
Query: 60 VEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEG 119
EDV P+ TGHEREEL+AEL+GK+ILEI+YP GPFGTK+ PAVVKSYYDKRIVGCPG +G
Sbjct: 56 PEDVIPIVTGHEREELQAELQGKDILEINYPEGPFGTKEEPAVVKSYYDKRIVGCPGADG 115
Query: 120 EDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
EDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGG PDGH +D HH
Sbjct: 116 EDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGSPDGHDEDSHH 161
>gi|357455121|ref|XP_003597841.1| Cytochrome c oxidase subunit 5B [Medicago truncatula]
gi|355486889|gb|AES68092.1| Cytochrome c oxidase subunit 5B [Medicago truncatula]
gi|388495938|gb|AFK36035.1| unknown [Medicago truncatula]
Length = 150
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/162 (68%), Positives = 125/162 (77%), Gaps = 16/162 (9%)
Query: 1 MWRRICSS-QLKAQALALAQYSCRSAPVNPSIASRSLISRPLFA--SRHFSADSAGTSVK 57
MWRRI SS LK A S S P RS ++ FA SRH + SAG SVK
Sbjct: 1 MWRRIVSSPHLKTLA-----SSSHSHP-------RSAVAGLRFAGLSRHVATQSAG-SVK 47
Query: 58 KRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGG 117
K VEDV P+ATGHEREE++A+LEG+NILEID+P GPFGTK+APAVVKSYY++RIVGCPGG
Sbjct: 48 KTVEDVVPIATGHEREEIQADLEGRNILEIDHPEGPFGTKEAPAVVKSYYNRRIVGCPGG 107
Query: 118 EGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGH 159
EGEDEHDVVWFWLE+GKPHECPVC+QYF LEVVGPGG P GH
Sbjct: 108 EGEDEHDVVWFWLEEGKPHECPVCAQYFQLEVVGPGGDPYGH 149
>gi|225442833|ref|XP_002285331.1| PREDICTED: cytochrome c oxidase subunit 5b-2, mitochondrial [Vitis
vinifera]
gi|297743391|emb|CBI36258.3| unnamed protein product [Vitis vinifera]
Length = 176
Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 108/168 (64%), Positives = 125/168 (74%), Gaps = 15/168 (8%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSAPVNPSIASRSLIS---------RPLFASRHFSADS 51
MWR S+QL Q LA ++ + + +RS IS LF SR FSA+S
Sbjct: 1 MWRGRLSAQL--QTLARSRSAANLTRLVTGDINRSFISPSPAPFRRTASLF-SRQFSAES 57
Query: 52 AGTSV---KKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYD 108
A +V KKRVEDV P+ATGHEREELEA L+G++IL+ D+P GPFGTK+APAVV+SYYD
Sbjct: 58 ADNAVSKEKKRVEDVMPIATGHEREELEAALDGRDILDADHPVGPFGTKEAPAVVQSYYD 117
Query: 109 KRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPP 156
KRIVGCPGGEGEDEHDVVWFWLEKGK HECPVCSQYF LEV+GPGGPP
Sbjct: 118 KRIVGCPGGEGEDEHDVVWFWLEKGKSHECPVCSQYFTLEVIGPGGPP 165
>gi|113734311|dbj|BAF30481.1| cytochrome c oxidase subunit Vb [Pisum sativum]
gi|113734317|dbj|BAF30484.1| cytochrome c oxidase subunit Vb [Pisum sativum]
Length = 150
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/159 (66%), Positives = 120/159 (75%), Gaps = 10/159 (6%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVKKRV 60
MWRR+ +S + + RSA R + SRH + SA SVKKRV
Sbjct: 1 MWRRLFTSPHLKTLSSSSLSHPRSAVAG---------IRCVDLSRHVATQSA-ASVKKRV 50
Query: 61 EDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGE 120
EDV P+ATGHEREE++AELEG+NILEID+P GPFGTKDAPAVV+S+YD+RIVGCPGGEGE
Sbjct: 51 EDVVPIATGHEREEIQAELEGRNILEIDHPEGPFGTKDAPAVVRSFYDRRIVGCPGGEGE 110
Query: 121 DEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGH 159
DEHDVVWFWLEKGKPHECPVC+QYF LEVVGPGG P GH
Sbjct: 111 DEHDVVWFWLEKGKPHECPVCTQYFELEVVGPGGDPYGH 149
>gi|388512435|gb|AFK44279.1| unknown [Lotus japonicus]
Length = 153
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/150 (69%), Positives = 117/150 (78%), Gaps = 12/150 (8%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVKKRV 60
MWRR+ SS LK A Q A +N S S SL+ RHFS TS+KK+V
Sbjct: 1 MWRRLLSSHLKTLATCSPQSVSTVAALNCS--SVSLL-------RHFSDT---TSIKKKV 48
Query: 61 EDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGE 120
EDV P+ATGHEREEL+A LEG++ILEI++P GPFGTK+APAVVKSYYDKRIVGCPGGEGE
Sbjct: 49 EDVMPIATGHEREELQANLEGRDILEINHPVGPFGTKEAPAVVKSYYDKRIVGCPGGEGE 108
Query: 121 DEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
DEHDVVWFWLEKGKPHECPVC+QYFVLEVV
Sbjct: 109 DEHDVVWFWLEKGKPHECPVCAQYFVLEVV 138
>gi|408717409|gb|AFU52881.1| cytochrome C oxidase subunit Vb [Vitis vinifera]
Length = 176
Score = 202 bits (513), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 105/168 (62%), Positives = 124/168 (73%), Gaps = 15/168 (8%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSAPVNPSIASRSLIS---------RPLFASRHFSADS 51
MWR S+QL Q LA ++ + + +RS IS LF SR FSA+S
Sbjct: 1 MWRGRLSAQL--QTLARSRSAANLTRLVTGDINRSFISPSPAPFRRTASLF-SRQFSAES 57
Query: 52 AGTSV---KKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYD 108
A +V KKR+EDV P+ATGHEREELEA L+G++IL+ D+P GPFGTK+APAVV+SYYD
Sbjct: 58 ADNAVSKEKKRIEDVMPIATGHEREELEAALDGRDILDADHPVGPFGTKEAPAVVQSYYD 117
Query: 109 KRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPP 156
KRI GCPGGEGEDEHDVVWFWLEKG+ HECPVCSQYF LEV+GPGGPP
Sbjct: 118 KRIAGCPGGEGEDEHDVVWFWLEKGESHECPVCSQYFTLEVIGPGGPP 165
>gi|113734313|dbj|BAF30482.1| cytochrome c oxidase subunit Vb [Pisum sativum]
gi|113734319|dbj|BAF30485.1| cytochrome c oxidase subunit Vb [Pisum sativum]
Length = 150
Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 96/116 (82%), Positives = 106/116 (91%), Gaps = 1/116 (0%)
Query: 44 SRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVV 103
SRH + SA SVKKRVEDV P+ATGHEREE++AELEG+NILEID+P GPFGTKDAPAVV
Sbjct: 35 SRHVATQSA-ASVKKRVEDVVPIATGHEREEIQAELEGRNILEIDHPEGPFGTKDAPAVV 93
Query: 104 KSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGH 159
+S+YD+RIVGCPGGEGEDEHDVVWFWLEKGKPHECPVC+QYF LEVVGPGG P GH
Sbjct: 94 RSFYDRRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCTQYFELEVVGPGGDPYGH 149
>gi|317106755|dbj|BAJ53249.1| JHL25H03.12 [Jatropha curcas]
Length = 165
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/150 (68%), Positives = 115/150 (76%), Gaps = 1/150 (0%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVKKRV 60
MWRR SSQLK A + + S LF R+F+AD+A SV KRV
Sbjct: 1 MWRRAVSSQLKTLASCRSAAAAARFASPNRSIISPSPSASLF-HRYFNADAASGSVGKRV 59
Query: 61 EDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGE 120
ED+ P+ATG EREELEAEL+GK+ILEI++P GPFGTK+APAVVKSYYDKRIVGCPGGEGE
Sbjct: 60 EDIMPIATGSEREELEAELQGKDILEINHPVGPFGTKEAPAVVKSYYDKRIVGCPGGEGE 119
Query: 121 DEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
DEHDVVWFWLEKGKPHECPVC+QYFVLEVV
Sbjct: 120 DEHDVVWFWLEKGKPHECPVCTQYFVLEVV 149
>gi|255553065|ref|XP_002517575.1| cytochrome C oxidase, putative [Ricinus communis]
gi|223543207|gb|EEF44739.1| cytochrome C oxidase, putative [Ricinus communis]
Length = 171
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/156 (65%), Positives = 123/156 (78%), Gaps = 8/156 (5%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSAPVNPSIAS---RSLISRPLFAS---RHFSADSAGT 54
MWRR SS LK LA + S ++ AS RS +S AS R+F+A++A
Sbjct: 1 MWRRSLSSHLKT--LAASSSSRTTSAAASRFASPKHRSFLSPSPSASIFQRYFTAEAADG 58
Query: 55 SVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGC 114
+VK+RVED P+ATGHEREELEAEL+G++ILEI++P GPFGTK+APAVVKSYYDKR+VGC
Sbjct: 59 AVKRRVEDAMPIATGHEREELEAELQGRDILEINHPVGPFGTKEAPAVVKSYYDKRLVGC 118
Query: 115 PGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
PGGEGEDEHDV+WFWL+KGKPHECPVC+QYFVLEVV
Sbjct: 119 PGGEGEDEHDVIWFWLKKGKPHECPVCTQYFVLEVV 154
>gi|113734309|dbj|BAF30480.1| cytochrome c oxidase subunit Vb [Pisum sativum]
Length = 155
Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 111/166 (66%), Positives = 126/166 (75%), Gaps = 12/166 (7%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSA-GTSVKKR 59
M RR+ SSQLK + + S V S+ S HFS S T VKK+
Sbjct: 1 MLRRLISSQLKTLTSSSSPLRSPSPAVAVSLLSC-----------HFSTQSDDSTVVKKK 49
Query: 60 VEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEG 119
VED+ P+ATGHEREEL+A++EG++ILEID+P GPFGTK+APAVVKSYYDKRIVGCPGGEG
Sbjct: 50 VEDIVPIATGHEREELQAQIEGRDILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEG 109
Query: 120 EDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
EDEHDVVWFWLEK KPHECPVC+QYFVLEVVGPGGPP GHGDD HH
Sbjct: 110 EDEHDVVWFWLEKDKPHECPVCAQYFVLEVVGPGGPPYGHGDDHHH 155
>gi|113734315|dbj|BAF30483.1| cytochrome c oxidase subunit Vb [Pisum sativum]
Length = 155
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 112/165 (67%), Positives = 130/165 (78%), Gaps = 10/165 (6%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVKKRV 60
M RR+ SSQLK + + S V S+ S LF+++ S DS T VKK+V
Sbjct: 1 MLRRLISSQLKTLTSSSSPLRSPSPAVAVSLLS------CLFSTQ--SDDS--TVVKKKV 50
Query: 61 EDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGE 120
ED+ P+ATGHEREEL+A++EG++ILEID+P GPFGTK+APAVVKSYYDKRIVGCPGGEGE
Sbjct: 51 EDIVPIATGHEREELQAQIEGRDILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGE 110
Query: 121 DEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
DEHDVVWFWLEK KPHECPVC+QYFVLEVVGPGGPP GHGDD HH
Sbjct: 111 DEHDVVWFWLEKDKPHECPVCAQYFVLEVVGPGGPPYGHGDDHHH 155
>gi|21592567|gb|AAM64516.1| cytochrome c oxidase subunit, putative [Arabidopsis thaliana]
Length = 171
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 120/157 (76%), Gaps = 7/157 (4%)
Query: 1 MWRRICSSQLKAQAL--ALAQYSCRSAPVNP---SIASR--SLISRPLFASRHFSADSAG 53
MWRRI SS LK+ + + A SCR A V S+++R S+ + SR + +A
Sbjct: 1 MWRRIVSSHLKSISAVGSCAAPSCRHAVVESTHLSLSTRASSIPAYSSIFSRQIGSAAAD 60
Query: 54 TSVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVG 113
T+VKKRVEDV P+ATGHE+EEL+AELEG+ + +ID+P GPFGTK+APAVVKSYYD RIVG
Sbjct: 61 TAVKKRVEDVMPIATGHEKEELQAELEGRKLDDIDFPEGPFGTKEAPAVVKSYYDMRIVG 120
Query: 114 CPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
CPGGEGEDEHDVVWFWLEKGK ECPVC+QYF LEVV
Sbjct: 121 CPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFKLEVV 157
>gi|297853038|ref|XP_002894400.1| hypothetical protein ARALYDRAFT_892286 [Arabidopsis lyrata subsp.
lyrata]
gi|297340242|gb|EFH70659.1| hypothetical protein ARALYDRAFT_892286 [Arabidopsis lyrata subsp.
lyrata]
Length = 176
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/159 (71%), Positives = 126/159 (79%), Gaps = 9/159 (5%)
Query: 1 MWRRICSSQLKAQA----LALAQYSCR---SAPVNPSIAS-RSLIS-RPLFASRHFSADS 51
MWRRI SS LK+ A A+A S R S PV +++ RS IS SRHFS++S
Sbjct: 1 MWRRIVSSNLKSLATASDFAVASSSRRFVVSKPVGLHLSTNRSTISASSSLLSRHFSSES 60
Query: 52 AGTSVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRI 111
AGTSVKK VEDV P+ATGHEREELEAELEG+ +L+IDYP GPFGTK++PAVVKSYYDKRI
Sbjct: 61 AGTSVKKNVEDVMPIATGHEREELEAELEGRRLLDIDYPEGPFGTKESPAVVKSYYDKRI 120
Query: 112 VGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
VGCPGGEGEDEHDVVWFWLEKGK ECPVCSQYF LEVV
Sbjct: 121 VGCPGGEGEDEHDVVWFWLEKGKSFECPVCSQYFELEVV 159
>gi|82623399|gb|ABB87114.1| cytochrome c oxidase family protein-like [Solanum tuberosum]
Length = 167
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/153 (64%), Positives = 116/153 (75%), Gaps = 5/153 (3%)
Query: 1 MWRRICSSQLKAQALALAQYSCR-SAPVNPSIASRSLISRPL--FASRHFSADSAGTSVK 57
MWRR+ S L S R SA S++S RP F SRHFS SA +V
Sbjct: 1 MWRRLSSQVRTLSPLRSTAKSNRLSAAAVTSLSSSPATFRPTVPFISRHFSTASA--NVV 58
Query: 58 KRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGG 117
K++EDV P+ATGHEREELEAE++GK++L I++P GPFGTK+APAVV+SYYDKRIVGCPG
Sbjct: 59 KKIEDVMPIATGHEREELEAEIQGKDLLAINFPEGPFGTKEAPAVVESYYDKRIVGCPGD 118
Query: 118 EGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
EGEDEHDVVWFWLEKGKPHECPVC+Q+FVL+VV
Sbjct: 119 EGEDEHDVVWFWLEKGKPHECPVCAQHFVLKVV 151
>gi|15220092|ref|NP_178140.1| cytochrome c oxidase subunit Vb [Arabidopsis thaliana]
gi|75207492|sp|Q9SSB8.1|CX5B2_ARATH RecName: Full=Cytochrome c oxidase subunit 5b-2, mitochondrial;
Short=AtCOX5b-2; Flags: Precursor
gi|5902388|gb|AAD55490.1|AC009322_30 Unknown protein [Arabidopsis thaliana]
gi|30102586|gb|AAP21211.1| At1g80230 [Arabidopsis thaliana]
gi|110743472|dbj|BAE99622.1| hypothetical protein [Arabidopsis thaliana]
gi|332198252|gb|AEE36373.1| cytochrome c oxidase subunit Vb [Arabidopsis thaliana]
Length = 171
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 120/157 (76%), Gaps = 7/157 (4%)
Query: 1 MWRRICSSQLKAQAL--ALAQYSCRSAPVNP---SIASR--SLISRPLFASRHFSADSAG 53
MWRRI SS LK+ + + A SCR A V S+++R S+ + SR + +A
Sbjct: 1 MWRRIVSSHLKSISAVGSCAAPSCRHAVVESTHLSLSTRASSIPAYSSIFSRLIGSAAAD 60
Query: 54 TSVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVG 113
T+VKKRVEDV P+ATGHE+EEL+AELEG+ + +ID+P GPFGTK+APAVVKSYYD RIVG
Sbjct: 61 TAVKKRVEDVMPIATGHEKEELQAELEGRKLDDIDFPEGPFGTKEAPAVVKSYYDMRIVG 120
Query: 114 CPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
CPGGEGEDEHDVVWFWLEKGK ECPVC+QYF LEVV
Sbjct: 121 CPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFKLEVV 157
>gi|352091163|gb|AEQ61828.1| cytochrome c oxidase subunit Vb [Dimocarpus longan]
Length = 140
Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 107/143 (74%), Positives = 120/143 (83%), Gaps = 3/143 (2%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVKKRV 60
MWRRICSS LKA LAL+ S+ + A+RSL S PLF +R S+DS GTSVKK+V
Sbjct: 1 MWRRICSSHLKA--LALSHSRSASSIAVSAAANRSLASPPLFTARLLSSDS-GTSVKKKV 57
Query: 61 EDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGE 120
EDV P+ATGHEREEL AELEG+ +L+ID+P GPFGTK+APAVVKSYYDKRIVGCPGGEGE
Sbjct: 58 EDVMPIATGHEREELAAELEGRKLLDIDFPVGPFGTKEAPAVVKSYYDKRIVGCPGGEGE 117
Query: 121 DEHDVVWFWLEKGKPHECPVCSQ 143
DEHDVVWFWLEKGKPHECPVCSQ
Sbjct: 118 DEHDVVWFWLEKGKPHECPVCSQ 140
>gi|242094638|ref|XP_002437809.1| hypothetical protein SORBIDRAFT_10g002940 [Sorghum bicolor]
gi|241916032|gb|EER89176.1| hypothetical protein SORBIDRAFT_10g002940 [Sorghum bicolor]
Length = 165
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/158 (61%), Positives = 117/158 (74%), Gaps = 5/158 (3%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVKKRV 60
MW+R S L+ AL S ++ S SR+ PLF S + D+AGT + RV
Sbjct: 1 MWKRATSLLLRHHRSALGPRSPAASAAAASGLSRTQAPAPLFFS---TLDAAGT--RTRV 55
Query: 61 EDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGE 120
EDV P+ATG EREE+EAEL+GK ++D P GPFGTK+APAV++SYY+KRIVGCPGGEGE
Sbjct: 56 EDVMPIATGLEREEIEAELQGKKRFDMDAPVGPFGTKEAPAVIQSYYNKRIVGCPGGEGE 115
Query: 121 DEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDG 158
DEHDVVWFWLEKGKPHECPVC+QYF L+V+G GG PDG
Sbjct: 116 DEHDVVWFWLEKGKPHECPVCTQYFTLDVIGQGGSPDG 153
>gi|356519389|ref|XP_003528355.1| PREDICTED: cytochrome c oxidase subunit 5b-2, mitochondrial-like
isoform 1 [Glycine max]
gi|356519391|ref|XP_003528356.1| PREDICTED: cytochrome c oxidase subunit 5b-2, mitochondrial-like
isoform 2 [Glycine max]
Length = 163
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 99/151 (65%), Positives = 118/151 (78%), Gaps = 4/151 (2%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSA-GTSVKKR 59
M RR+ SS LK A + A + + + A + +SR + +FS S T++KK+
Sbjct: 1 MLRRLLSSHLKTLASSAAAAATATPRSASASARFAALSR---SCLYFSTQSEDATAIKKK 57
Query: 60 VEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEG 119
VED+ P+ATGHEREEL+AELEG+NILEID+P GPFGTK+APAVVKSYYDKRIVGCPGGEG
Sbjct: 58 VEDIMPIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEG 117
Query: 120 EDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
EDEHDVVWFWLEK KPHECPVC+QYFVLEVV
Sbjct: 118 EDEHDVVWFWLEKDKPHECPVCAQYFVLEVV 148
>gi|255647706|gb|ACU24314.1| unknown [Glycine max]
Length = 162
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/150 (64%), Positives = 114/150 (76%), Gaps = 3/150 (2%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVKKRV 60
M RR+ SS LK A + A + + S +L L+ S + T++KK+V
Sbjct: 1 MLRRLLSSHLKTLASSAAAATATPRSASASARFAALSRSCLYFS---TQSEDATAIKKKV 57
Query: 61 EDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGE 120
ED+ P+ATGHEREEL+AELEG+NILEID+P GPFGTK+APAVVKSYYDKRIVGCPGGEGE
Sbjct: 58 EDIMPIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGE 117
Query: 121 DEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
DEHDVVWFWLEK KPHECPVC+QYFVLEVV
Sbjct: 118 DEHDVVWFWLEKDKPHECPVCAQYFVLEVV 147
>gi|224058705|ref|XP_002299612.1| predicted protein [Populus trichocarpa]
gi|118488066|gb|ABK95853.1| unknown [Populus trichocarpa]
gi|222846870|gb|EEE84417.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/154 (67%), Positives = 121/154 (78%), Gaps = 7/154 (4%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSAPVNPSIASRSLI----SRPLFASRHFSADSAGTSV 56
MWRR+ SS L+ L + + + + +RS+I S LF +R+FSADS +V
Sbjct: 1 MWRRLASSHLRT--LVTSTSTTSARSTQSLLLNRSIINPSPSTSLF-NRYFSADSVDGAV 57
Query: 57 KKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPG 116
KKRVEDV P+ATGHEREELEAELEGK +L+IDYP GPFGTK+ PAV+KSYYDKRIVGCPG
Sbjct: 58 KKRVEDVMPIATGHEREELEAELEGKKLLDIDYPDGPFGTKEKPAVIKSYYDKRIVGCPG 117
Query: 117 GEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
GEGEDEHDVVWFWLEKGKPHECPVC+Q FVLEVV
Sbjct: 118 GEGEDEHDVVWFWLEKGKPHECPVCTQNFVLEVV 151
>gi|224073766|ref|XP_002304162.1| predicted protein [Populus trichocarpa]
gi|222841594|gb|EEE79141.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/153 (67%), Positives = 117/153 (76%), Gaps = 10/153 (6%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSAPVNPSIASRSLISRPLFAS---RHFSADSAGTSVK 57
MWRR+ SS LK A A A S RS L++R AS R+ SA S +VK
Sbjct: 1 MWRRLASSHLKTLATASASASVRSTQF-------LLLNRSPSASVFNRYLSAASVDGAVK 53
Query: 58 KRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGG 117
KRVEDV P+ATGHEREELEAELEGK +L+ID+P GPFGTK+ P+V+KSYYDKRIVGCPGG
Sbjct: 54 KRVEDVMPIATGHEREELEAELEGKKLLDIDFPEGPFGTKEEPSVIKSYYDKRIVGCPGG 113
Query: 118 EGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
EGEDEHDVVWFWLEKGKPHECPVC+Q+F LEVV
Sbjct: 114 EGEDEHDVVWFWLEKGKPHECPVCTQHFALEVV 146
>gi|357110798|ref|XP_003557203.1| PREDICTED: cytochrome c oxidase subunit 5b-2, mitochondrial-like
[Brachypodium distachyon]
Length = 163
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/150 (60%), Positives = 111/150 (74%), Gaps = 5/150 (3%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVKKRV 60
MW+R S+ L A+ ALA + R+ ++ S L P F FS AG V+ RV
Sbjct: 1 MWKRAASALLLARRSALAVAAHRAPSISASADVSPLRRGPAF----FSTLDAG-QVRTRV 55
Query: 61 EDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGE 120
EDV P+ATG EREE+EAEL+GK ++D P GPFGTK+APAV++SY+DKRIVGCPGGEGE
Sbjct: 56 EDVMPIATGLEREEIEAELQGKKRFDMDAPVGPFGTKEAPAVIQSYFDKRIVGCPGGEGE 115
Query: 121 DEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
DEHDV+WFWLEKGKPHECPVC+QYF LEV+
Sbjct: 116 DEHDVLWFWLEKGKPHECPVCTQYFKLEVI 145
>gi|297830146|ref|XP_002882955.1| hypothetical protein ARALYDRAFT_479016 [Arabidopsis lyrata subsp.
lyrata]
gi|297328795|gb|EFH59214.1| hypothetical protein ARALYDRAFT_479016 [Arabidopsis lyrata subsp.
lyrata]
Length = 177
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/176 (67%), Positives = 135/176 (76%), Gaps = 11/176 (6%)
Query: 1 MWRRICSSQLKAQA----LALAQYSCRSAPVNPS----IASRSLISRPLFA-SRHFSADS 51
MWRRI SSQLK A +A + +A V P A+RS IS F RHFS++S
Sbjct: 1 MWRRIVSSQLKTLAADVVVAASPRRSLAATVRPVGFYLAANRSAISASSFVIPRHFSSES 60
Query: 52 AGTSVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRI 111
T KK+VEDV P+ATGHE+EELEAELEG+ + +ID+P GPFGTK+APA+VKSYYDKRI
Sbjct: 61 VETPAKKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIVKSYYDKRI 120
Query: 112 VGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHG--DDDHH 165
VGCPGGEGEDEHDVVWFWLEKGK ECPVC+QYF LEVVGPGGPPDGHG DD+HH
Sbjct: 121 VGCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFELEVVGPGGPPDGHGDEDDEHH 176
>gi|449469018|ref|XP_004152218.1| PREDICTED: cytochrome c oxidase subunit 5b-2, mitochondrial-like
[Cucumis sativus]
gi|449484203|ref|XP_004156815.1| PREDICTED: cytochrome c oxidase subunit 5b-2, mitochondrial-like
[Cucumis sativus]
Length = 179
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/127 (77%), Positives = 113/127 (88%), Gaps = 3/127 (2%)
Query: 41 LFASRHFSADSA-GTSVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDA 99
LFA RHFSA++A +KK VEDV P+ATGHEREELEA LEG++IL+ID P GPFGTK+A
Sbjct: 53 LFA-RHFSAEAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEA 111
Query: 100 PAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGH 159
PAV+KSYYD+RIVGCPGGEG+DEHDVVWF L+KG+PHECPVC+QYF LEVVGPGG PDG+
Sbjct: 112 PAVIKSYYDERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGY 171
Query: 160 G-DDDHH 165
G DDDHH
Sbjct: 172 GNDDDHH 178
>gi|15232644|ref|NP_188185.1| cytochrome c oxidase subunit Vb [Arabidopsis thaliana]
gi|75274420|sp|Q9LW15.1|CX5B1_ARATH RecName: Full=Cytochrome c oxidase subunit 5b-1, mitochondrial;
Short=AtCOX5b-1; Flags: Precursor
gi|14194105|gb|AAK56247.1|AF367258_1 AT3g15640/MSJ11_4 [Arabidopsis thaliana]
gi|11994336|dbj|BAB02295.1| cytochrome c oxidase subunit Vb precursor-like protein [Arabidopsis
thaliana]
gi|15777879|gb|AAL05900.1| AT3g15640/MSJ11_4 [Arabidopsis thaliana]
gi|21592929|gb|AAM64879.1| putative cytochrome c oxidase subunit Vb [Arabidopsis thaliana]
gi|332642185|gb|AEE75706.1| cytochrome c oxidase subunit Vb [Arabidopsis thaliana]
Length = 176
Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 133/175 (76%), Gaps = 10/175 (5%)
Query: 1 MWRRICSSQLKAQALALAQYSCR------SAPVNPSIAS-RSLISRPLFA-SRHFSADSA 52
MWRRI SSQLK A + S R + PV +A+ RS IS F R FS+DS
Sbjct: 1 MWRRIVSSQLKTLAADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIPRRFSSDSV 60
Query: 53 GTSVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIV 112
T K+VEDV P+ATGHE+EELEAELEG+ + +ID+P GPFGTK+APA+VKSYYDKRIV
Sbjct: 61 ETPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIVKSYYDKRIV 120
Query: 113 GCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHG--DDDHH 165
GCPGGEGEDEHDVVWFWLEKGK ECPVC+QYF LEVVGPGGPPDGHG DD+HH
Sbjct: 121 GCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFELEVVGPGGPPDGHGDEDDEHH 175
>gi|326512426|dbj|BAJ99568.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326516702|dbj|BAJ96343.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 159
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/156 (57%), Positives = 108/156 (69%), Gaps = 9/156 (5%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVKKRV 60
MW+R S L ++ AQ AP A+ L P F FS G + + RV
Sbjct: 1 MWKRAASLLLARRSAVAAQ----RAPAISGSAASGLRRAPAF----FSTLDVGQA-RTRV 51
Query: 61 EDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGE 120
EDV P+ATG EREE+EAEL+GK ++D P GPFGTK+ PA+++SY+DKRIVGCPG EGE
Sbjct: 52 EDVMPIATGLEREEIEAELQGKKRFDMDAPVGPFGTKENPAIIQSYFDKRIVGCPGDEGE 111
Query: 121 DEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPP 156
DEHDVVWFWLEKGKPHECPVC+QYF LEV+G GG P
Sbjct: 112 DEHDVVWFWLEKGKPHECPVCTQYFKLEVIGNGGNP 147
>gi|145332591|ref|NP_001078161.1| cytochrome c oxidase subunit Vb [Arabidopsis thaliana]
gi|332642186|gb|AEE75707.1| cytochrome c oxidase subunit Vb [Arabidopsis thaliana]
Length = 175
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 133/175 (76%), Gaps = 11/175 (6%)
Query: 1 MWRRICSSQLKAQALALAQYSCR------SAPVNPSIAS-RSLISRPLFA-SRHFSADSA 52
MWRRI SSQLK A + S R + PV +A+ RS IS F R FS+DS
Sbjct: 1 MWRRIVSSQLKTLAADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIPRRFSSDSE 60
Query: 53 GTSVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIV 112
T K+VEDV P+ATGHE+EELEAELEG+ + +ID+P GPFGTK+APA+VKSYYDKRIV
Sbjct: 61 -TPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIVKSYYDKRIV 119
Query: 113 GCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHG--DDDHH 165
GCPGGEGEDEHDVVWFWLEKGK ECPVC+QYF LEVVGPGGPPDGHG DD+HH
Sbjct: 120 GCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFELEVVGPGGPPDGHGDEDDEHH 174
>gi|297839915|ref|XP_002887839.1| hypothetical protein ARALYDRAFT_477231 [Arabidopsis lyrata subsp.
lyrata]
gi|297333680|gb|EFH64098.1| hypothetical protein ARALYDRAFT_477231 [Arabidopsis lyrata subsp.
lyrata]
Length = 171
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 117/157 (74%), Gaps = 7/157 (4%)
Query: 1 MWRRICSSQLKA--QALALAQYSCRSAPVNPSIASRSLISRPLFA-----SRHFSADSAG 53
MWRRI SS LK+ + A SCR A V + S S + + A SR + +A
Sbjct: 1 MWRRIVSSHLKSISAGWSCAAPSCRHAVVETTHLSLSTRASSIPAYSSVFSRQIGSTAAD 60
Query: 54 TSVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVG 113
T+VK+RVEDV P+ATGHE+EELEAELEG+ + +ID+P GPFGTK+APAVVKSYYD RIVG
Sbjct: 61 TAVKRRVEDVMPIATGHEKEELEAELEGRKLDDIDFPEGPFGTKEAPAVVKSYYDMRIVG 120
Query: 114 CPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
CPGGEGEDEHDVVWFWLEKGK ECPVC+QYF LEVV
Sbjct: 121 CPGGEGEDEHDVVWFWLEKGKHFECPVCTQYFKLEVV 157
>gi|115466344|ref|NP_001056771.1| Os06g0142700 [Oryza sativa Japonica Group]
gi|5803264|dbj|BAA83574.1| putative cytochrome c oxidase subunit Vb precursor [Oryza sativa
Japonica Group]
gi|113594811|dbj|BAF18685.1| Os06g0142700 [Oryza sativa Japonica Group]
gi|125554007|gb|EAY99612.1| hypothetical protein OsI_21590 [Oryza sativa Indica Group]
gi|125596016|gb|EAZ35796.1| hypothetical protein OsJ_20088 [Oryza sativa Japonica Group]
gi|215701067|dbj|BAG92491.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 154
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/151 (58%), Positives = 110/151 (72%), Gaps = 14/151 (9%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVKKRV 60
MW+R S L ++ AL + S P+I ++ R LF S + D+A + RV
Sbjct: 1 MWKRATSVLLHHRS-ALTRRS-------PAIGG-GVLPRALFFS---TLDAA--QARTRV 46
Query: 61 EDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGE 120
EDV P+ATG EREE+ AEL+GK ++D P GPFGTK+APAV++SYY+KRIVGCPGGEGE
Sbjct: 47 EDVMPIATGLEREEIAAELQGKKRFDMDAPVGPFGTKEAPAVIQSYYNKRIVGCPGGEGE 106
Query: 121 DEHDVVWFWLEKGKPHECPVCSQYFVLEVVG 151
DEHDVVWFWLEKGKPHECPVC+QYF LEV+G
Sbjct: 107 DEHDVVWFWLEKGKPHECPVCTQYFSLEVIG 137
>gi|296082004|emb|CBI21009.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/99 (74%), Positives = 86/99 (86%), Gaps = 4/99 (4%)
Query: 58 KRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGG 117
K+VE+V P+ATGHEREELE G+ +LE +YP GPFGTK+APA+VKS+YD+RIVGCPGG
Sbjct: 119 KKVENVIPIATGHEREELE----GRTLLEANYPIGPFGTKEAPAIVKSFYDRRIVGCPGG 174
Query: 118 EGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPP 156
EGEDEHDVVWFWL K +PH CPVCSQ+F LEVVGPGG P
Sbjct: 175 EGEDEHDVVWFWLHKDQPHVCPVCSQHFKLEVVGPGGSP 213
>gi|359475801|ref|XP_002282483.2| PREDICTED: cytochrome c oxidase subunit 5b-2, mitochondrial [Vitis
vinifera]
Length = 162
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/99 (74%), Positives = 86/99 (86%), Gaps = 4/99 (4%)
Query: 58 KRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGG 117
K+VE+V P+ATGHEREELE G+ +LE +YP GPFGTK+APA+VKS+YD+RIVGCPGG
Sbjct: 65 KKVENVIPIATGHEREELE----GRTLLEANYPIGPFGTKEAPAIVKSFYDRRIVGCPGG 120
Query: 118 EGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPP 156
EGEDEHDVVWFWL K +PH CPVCSQ+F LEVVGPGG P
Sbjct: 121 EGEDEHDVVWFWLHKDQPHVCPVCSQHFKLEVVGPGGSP 159
>gi|125571152|gb|EAZ12667.1| hypothetical protein OsJ_02582 [Oryza sativa Japonica Group]
Length = 209
Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/123 (60%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
Query: 28 NPSIASRSLISRPLFASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEGKNILEI 87
PS R + S+ L + +G VEDV P+ATG EREEL AEL+G+ ++
Sbjct: 71 QPSYGDRLMESQQLPQDYRANVPRSGDK-PATVEDVMPIATGLEREELAAELKGEKRFDM 129
Query: 88 DYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
D P GPFGTK+APAV++SYY+KRIVGCPGGEGEDEHDVVWFWL+K +PHECPVCSQYFVL
Sbjct: 130 DPPVGPFGTKEAPAVIESYYNKRIVGCPGGEGEDEHDVVWFWLKKDEPHECPVCSQYFVL 189
Query: 148 EVV 150
+V+
Sbjct: 190 KVI 192
>gi|115438502|ref|NP_001043555.1| Os01g0612200 [Oryza sativa Japonica Group]
gi|1841355|dbj|BAA12797.1| cytochrome c oxidase subunit Vb precursor [Oryza sativa Japonica
Group]
gi|21104683|dbj|BAB93273.1| putative cytochrome c oxidase-related [Oryza sativa Japonica Group]
gi|113533086|dbj|BAF05469.1| Os01g0612200 [Oryza sativa Japonica Group]
gi|215701018|dbj|BAG92442.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 169
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 82/91 (90%)
Query: 60 VEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEG 119
VEDV P+ATG EREEL AEL+G+ ++D P GPFGTK+APAV++SYY+KRIVGCPGGEG
Sbjct: 62 VEDVMPIATGLEREELAAELKGEKRFDMDPPVGPFGTKEAPAVIESYYNKRIVGCPGGEG 121
Query: 120 EDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
EDEHDVVWFWL+K +PHECPVCSQYFVL+V+
Sbjct: 122 EDEHDVVWFWLKKDEPHECPVCSQYFVLKVI 152
>gi|218188648|gb|EEC71075.1| hypothetical protein OsI_02834 [Oryza sativa Indica Group]
Length = 104
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/86 (75%), Positives = 78/86 (90%)
Query: 65 PVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHD 124
P+ATG EREEL AEL+G+ ++D P GPFGTK+APAV++SYY+KRIVGCPGGEGEDEHD
Sbjct: 2 PIATGLEREELAAELKGEKRFDMDPPVGPFGTKEAPAVIESYYNKRIVGCPGGEGEDEHD 61
Query: 125 VVWFWLEKGKPHECPVCSQYFVLEVV 150
VVWFWL+K +PHECPVCSQYFVL+V+
Sbjct: 62 VVWFWLKKDEPHECPVCSQYFVLKVI 87
>gi|357135494|ref|XP_003569344.1| PREDICTED: cytochrome c oxidase subunit 5b-2, mitochondrial-like
[Brachypodium distachyon]
Length = 165
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/154 (57%), Positives = 107/154 (69%), Gaps = 11/154 (7%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRH----FSADSAGTSV 56
MWRR+ Q A AL A + + P P+ A + +S A R FSAD T
Sbjct: 1 MWRRL---QTLAPALRRAAVAAGTGP-TPATARAAPLSTAAAAFRRTAPLFSADKPATPT 56
Query: 57 KKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPG 116
VED+ P+ATG EREELE EL+GK ++D P GPFGTK+APAV++SYY+KRIVGCPG
Sbjct: 57 ---VEDIMPIATGLEREELEGELQGKKRFDMDAPVGPFGTKEAPAVIESYYNKRIVGCPG 113
Query: 117 GEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
GEGEDEHDVVWFWL+K +PHECPVCSQYF L+V+
Sbjct: 114 GEGEDEHDVVWFWLKKDEPHECPVCSQYFTLKVI 147
>gi|326487828|dbj|BAJ89753.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326488659|dbj|BAJ97941.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326502608|dbj|BAJ98932.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 167
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 112/156 (71%), Gaps = 13/156 (8%)
Query: 1 MWRRICSSQLKAQALALAQYS------CRSAPVNPSIASRSLISRPLFASRHFSADSAGT 54
MWRR+ + + A A S R+AP++ ++A+ + PL ++ +A A T
Sbjct: 1 MWRRLQTLAPALRRAAAAAGSPPSPAIARAAPISTAVAAFRRTA-PLLSADKPAA--AAT 57
Query: 55 SVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGC 114
SV EDV P+ATG EREELEAEL+GK ++D P GPFGTK+APAV++SY+DKRIVGC
Sbjct: 58 SV----EDVMPIATGLEREELEAELQGKKRFDMDPPVGPFGTKEAPAVIESYFDKRIVGC 113
Query: 115 PGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
PG EGEDEHD+VWFWL+K +PHECPVCSQYFVL+V+
Sbjct: 114 PGDEGEDEHDLVWFWLKKDEPHECPVCSQYFVLKVI 149
>gi|168031320|ref|XP_001768169.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680607|gb|EDQ67042.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 157
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 92/140 (65%), Gaps = 6/140 (4%)
Query: 26 PVNPSIASRSLISRPLFASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEGKNIL 85
P P + + S+ F + F A G+ D +ATG EREELE + +GK
Sbjct: 24 PAGPPPTAALMSSQRWFNASGFRA---GSHAPSGALDEFGIATGVEREELEYQSQGKKRF 80
Query: 86 EIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYF 145
++D P GPFGTK+APA+++S YD+RIVGC GG GEDEHDV WF LEKG+ HECPVC+Q F
Sbjct: 81 DLDPPRGPFGTKEAPAIIESNYDERIVGCSGGLGEDEHDVTWFTLEKGQTHECPVCTQVF 140
Query: 146 VLEVVGPGGPPDGHGDDDHH 165
L+V+GPGG P G D+HH
Sbjct: 141 ELKVIGPGGKP---GSDEHH 157
>gi|242053593|ref|XP_002455942.1| hypothetical protein SORBIDRAFT_03g027710 [Sorghum bicolor]
gi|241927917|gb|EES01062.1| hypothetical protein SORBIDRAFT_03g027710 [Sorghum bicolor]
Length = 165
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 71/92 (77%), Positives = 84/92 (91%)
Query: 59 RVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGE 118
+VEDV P+ATG EREELEAEL+GK ++D P GPFGTK+APAV++SYY+KRIVGCPGGE
Sbjct: 57 KVEDVMPIATGLEREELEAELQGKKRFDMDPPVGPFGTKEAPAVIESYYNKRIVGCPGGE 116
Query: 119 GEDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
GEDEHDVVWFWL+K +PHECPVCSQYFVL+V+
Sbjct: 117 GEDEHDVVWFWLKKDEPHECPVCSQYFVLKVI 148
>gi|413950589|gb|AFW83238.1| hypothetical protein ZEAMMB73_246083 [Zea mays]
Length = 165
Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 71/92 (77%), Positives = 83/92 (90%)
Query: 59 RVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGE 118
RVEDV P+ATG EREELEAEL+GK ++D P GPFGTK+ PAV++SYY+KRIVGCPGGE
Sbjct: 57 RVEDVMPIATGLEREELEAELQGKKRFDMDSPVGPFGTKEEPAVIESYYNKRIVGCPGGE 116
Query: 119 GEDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
GEDEHDVVWFWL+K +PHECPVCSQYFVL+V+
Sbjct: 117 GEDEHDVVWFWLKKDEPHECPVCSQYFVLKVI 148
>gi|413950590|gb|AFW83239.1| hypothetical protein ZEAMMB73_246083 [Zea mays]
Length = 164
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 79/88 (89%)
Query: 59 RVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGE 118
RVEDV P+ATG EREELEAEL+GK ++D P GPFGTK+ PAV++SYY+KRIVGCPGGE
Sbjct: 57 RVEDVMPIATGLEREELEAELQGKKRFDMDSPVGPFGTKEEPAVIESYYNKRIVGCPGGE 116
Query: 119 GEDEHDVVWFWLEKGKPHECPVCSQYFV 146
GEDEHDVVWFWL+K +PHECPVCSQYF+
Sbjct: 117 GEDEHDVVWFWLKKDEPHECPVCSQYFL 144
>gi|195605746|gb|ACG24703.1| cytochrome c oxidase polypeptide Vb [Zea mays]
gi|195638444|gb|ACG38690.1| cytochrome c oxidase polypeptide Vb [Zea mays]
gi|414881816|tpg|DAA58947.1| TPA: cytochrome c oxidase polypeptide Vb [Zea mays]
Length = 165
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 81/91 (89%)
Query: 60 VEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEG 119
VEDV P+ATG EREELEAEL+GK ++D GPFGTK+ P+VV+SYY+KRIVGCPGGEG
Sbjct: 58 VEDVMPIATGLEREELEAELKGKKRFDMDPLVGPFGTKEEPSVVESYYNKRIVGCPGGEG 117
Query: 120 EDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
EDEHDVVWFWL+K +PHECPVCSQYFVL+V+
Sbjct: 118 EDEHDVVWFWLKKDEPHECPVCSQYFVLKVI 148
>gi|226491942|ref|NP_001144681.1| uncharacterized protein LOC100277708 [Zea mays]
gi|194695778|gb|ACF81973.1| unknown [Zea mays]
gi|195645610|gb|ACG42273.1| hypothetical protein [Zea mays]
Length = 104
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/86 (76%), Positives = 78/86 (90%)
Query: 65 PVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHD 124
P+ATG EREELEAEL+GK ++D P GPFGTK+ PAV++SYY+KRIVGCPGGEGEDEHD
Sbjct: 2 PIATGLEREELEAELQGKKRFDMDSPVGPFGTKEEPAVIESYYNKRIVGCPGGEGEDEHD 61
Query: 125 VVWFWLEKGKPHECPVCSQYFVLEVV 150
VVWFWL+K +PHECPVCSQYFVL+V+
Sbjct: 62 VVWFWLKKDEPHECPVCSQYFVLKVI 87
>gi|116785313|gb|ABK23674.1| unknown [Picea sitchensis]
Length = 171
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 103/160 (64%), Gaps = 10/160 (6%)
Query: 1 MWRRICSSQLKAQALALAQYSC---RSAPVNPSIASRSLI---SRPLFASRHFSADSAG- 53
MWRR + A AL Q + R S AS S + + P + SA S
Sbjct: 1 MWRRGATRLEALVASALKQRASVPHRCGGHCCSRASSSFLHSYAAPFSKTAPLSAQSGDG 60
Query: 54 ---TSVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKR 110
+K+VE + P+ATG EREELE ELEGK +++ P+GPFGTK+APA+V+SY+DKR
Sbjct: 61 EKLLKKEKQVEAIMPIATGLEREELEFELEGKLRFDLNPPSGPFGTKEAPAIVESYFDKR 120
Query: 111 IVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
IVGCPGG GE+EHDV+WFWLEK K ECPVCSQ+F L+V+
Sbjct: 121 IVGCPGGAGEEEHDVIWFWLEKDKSFECPVCSQFFQLKVI 160
>gi|42562709|ref|NP_175680.2| cytochrome c oxidase-related protein [Arabidopsis thaliana]
gi|347602498|sp|Q9SSS5.2|CX5BL_ARATH RecName: Full=Putative cytochrome c oxidase subunit 5b-like
gi|332194721|gb|AEE32842.1| cytochrome c oxidase-related protein [Arabidopsis thaliana]
Length = 90
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 72/92 (78%), Gaps = 7/92 (7%)
Query: 75 LEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGK 134
L+ E G+ +L+ID+P PFGTK++PAVV+SY+DKR +GC GGEGED HDVVWFWL+KGK
Sbjct: 4 LDKEYSGRRLLDIDHPESPFGTKESPAVVQSYFDKRNIGCRGGEGEDGHDVVWFWLDKGK 63
Query: 135 PHECPVCSQYFVLEVVGPGGPPDGHGDD-DHH 165
ECPVCSQYF GPPDGHGDD DHH
Sbjct: 64 SFECPVCSQYF------EHGPPDGHGDDEDHH 89
>gi|449531497|ref|XP_004172722.1| PREDICTED: cytochrome c oxidase subunit 5b-1, mitochondrial-like,
partial [Cucumis sativus]
Length = 69
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/68 (83%), Positives = 63/68 (92%)
Query: 98 DAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPD 157
+APAV+KSYYD+RIVGCPGGE EDEHDV+WF L KG PHECPVCSQYFVLEVVGPGG PD
Sbjct: 1 EAPAVIKSYYDERIVGCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPD 60
Query: 158 GHGDDDHH 165
G+G+DDHH
Sbjct: 61 GYGNDDHH 68
>gi|195644040|gb|ACG41488.1| cytochrome c oxidase polypeptide Vb [Zea mays]
Length = 166
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 80/91 (87%), Gaps = 1/91 (1%)
Query: 60 VEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEG 119
VEDV P+ATG EREELEAEL+GK ++D GPFGTK+ P+VV+SYY+KRIVGCPGGEG
Sbjct: 60 VEDVMPIATGLEREELEAELKGKKRFDMDPLVGPFGTKEEPSVVESYYNKRIVGCPGGEG 119
Query: 120 EDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
EDEHDVVWFWL+K +PHECPV SQYFVL+V+
Sbjct: 120 EDEHDVVWFWLKKDEPHECPV-SQYFVLKVI 149
>gi|195649575|gb|ACG44255.1| cytochrome c oxidase polypeptide Vb [Zea mays]
Length = 190
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 100/181 (55%), Gaps = 38/181 (20%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVK--- 57
MWRR+ Q LA + ++ S + L + P+ A R S + K
Sbjct: 1 MWRRL-------QTLAPSLRRAAASSSPASARAVPLSTVPVAAFRRTSTLLSSPGDKPAP 53
Query: 58 KRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDA------------------ 99
+VEDV P+ATG EREELEAEL+GK ++D GPFGTK
Sbjct: 54 SKVEDVMPIATGLEREELEAELQGKKRFDMDPAVGPFGTKVGFSRSNDCIFLWDGESSFF 113
Query: 100 ----------PAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEV 149
AV++SYY+KRIVGCPG EGEDEHDVVWFWLEK KPHEC VCS+YFVL+V
Sbjct: 114 LKLSPVRTVKLAVIESYYNKRIVGCPGAEGEDEHDVVWFWLEKDKPHECLVCSRYFVLKV 173
Query: 150 V 150
+
Sbjct: 174 I 174
>gi|147770045|emb|CAN74336.1| hypothetical protein VITISV_010832 [Vitis vinifera]
Length = 110
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/65 (78%), Positives = 57/65 (87%), Gaps = 1/65 (1%)
Query: 85 LEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQY 144
L I +P PF ++APAVV+SYYDKRIVGCPGGEGEDEHDVVWFWLEKGK HECPVCSQY
Sbjct: 6 LIIFFPL-PFLLREAPAVVQSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKSHECPVCSQY 64
Query: 145 FVLEV 149
F ++V
Sbjct: 65 FTMKV 69
>gi|5903035|gb|AAD55594.1|AC008016_4 Similar to gb|D85381 cytochrome c oxidase subunit Vb precursor from
Oryza sativa. ESTs gb|R30504 and gb|AA598195 come from
this gene, partial [Arabidopsis thaliana]
Length = 102
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 69/107 (64%), Gaps = 28/107 (26%)
Query: 81 GKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEG--------------------- 119
G+ +L+ID+P PFGTK++PAVV+SY+DKR +GC GGEG
Sbjct: 1 GRRLLDIDHPESPFGTKESPAVVQSYFDKRNIGCRGGEGAAGRCIHLPIICCVLISPETA 60
Query: 120 EDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDD-DHH 165
ED HDVVWFWL+KGK ECPVCSQYF GPPDGHGDD DHH
Sbjct: 61 EDGHDVVWFWLDKGKSFECPVCSQYF------EHGPPDGHGDDEDHH 101
>gi|414884523|tpg|DAA60537.1| TPA: hypothetical protein ZEAMMB73_502601 [Zea mays]
Length = 144
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 44/56 (78%), Positives = 53/56 (94%)
Query: 95 GTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
G ++ P+VV+SYY+KRIVGCPGGEGEDEHDVVWFWL+K +PHECPVCSQYFVL+V+
Sbjct: 72 GQREEPSVVESYYNKRIVGCPGGEGEDEHDVVWFWLKKDEPHECPVCSQYFVLKVI 127
>gi|302794065|ref|XP_002978797.1| hypothetical protein SELMODRAFT_418496 [Selaginella moellendorffii]
gi|302805919|ref|XP_002984710.1| hypothetical protein SELMODRAFT_423814 [Selaginella moellendorffii]
gi|300147692|gb|EFJ14355.1| hypothetical protein SELMODRAFT_423814 [Selaginella moellendorffii]
gi|300153606|gb|EFJ20244.1| hypothetical protein SELMODRAFT_418496 [Selaginella moellendorffii]
Length = 130
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 68/93 (73%), Gaps = 2/93 (2%)
Query: 58 KRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGG 117
K ++D+ +ATG EREELE GK + + P GPFGT + PA+++S+YD+RIVGCPGG
Sbjct: 26 KDIDDLG-IATGLEREELEFAKAGKKRWD-EPPVGPFGTAEKPAIIESWYDERIVGCPGG 83
Query: 118 EGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
G+DEHDV+WF L+K + HEC +C Q F L+ +
Sbjct: 84 PGDDEHDVIWFKLKKNERHECSICGQIFELKCI 116
>gi|168056288|ref|XP_001780153.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668465|gb|EDQ55072.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 52/65 (80%)
Query: 81 GKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPV 140
GK ++D P GPFGTK+APAV++S YD+R+VGC GG GEDEHDV WF LEKG+ ECPV
Sbjct: 1 GKKRFDLDPPRGPFGTKEAPAVIESNYDERVVGCSGGIGEDEHDVTWFTLEKGQSFECPV 60
Query: 141 CSQYF 145
C+Q F
Sbjct: 61 CTQVF 65
>gi|449524186|ref|XP_004169104.1| PREDICTED: cytochrome c oxidase subunit 5b-2, mitochondrial-like
[Cucumis sativus]
Length = 148
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 83/136 (61%), Gaps = 24/136 (17%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSAPVN-----PSIASRSLIS----RPLFASRHFSADS 51
MWRR+ SS LK+ + + SAP+ P +A+ S +S PLFA RH+++DS
Sbjct: 1 MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFA-RHYASDS 59
Query: 52 AGTSVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTK-------------- 97
A T +KK VEDV P+ATGHEREELEA LEGK+IL+I++P GPFGTK
Sbjct: 60 ADTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTKVGVVACFVIARINF 119
Query: 98 DAPAVVKSYYDKRIVG 113
DA A ++S+ R G
Sbjct: 120 DALAFIQSFIPCRFQG 135
>gi|428185747|gb|EKX54599.1| hypothetical protein GUITHDRAFT_160714 [Guillardia theta CCMP2712]
Length = 153
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 58/90 (64%), Gaps = 5/90 (5%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPG----GEGEDE 122
ATG ER E+ AE+ G+ I + ++ PFGTK+ P V++S +D+RIVGCPG G+ +
Sbjct: 60 ATGLERAEMLAEMNGEKIFD-EHMITPFGTKENPVVIESIFDERIVGCPGDCASGDTRNN 118
Query: 123 HDVVWFWLEKGKPHECPVCSQYFVLEVVGP 152
+++ WF + +P CP C+Q + L+ + P
Sbjct: 119 NEIRWFLVTSKEPFVCPTCNQVYTLKKIEP 148
>gi|147818029|emb|CAN69212.1| hypothetical protein VITISV_033819 [Vitis vinifera]
Length = 399
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 47/55 (85%)
Query: 56 VKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKR 110
++KRVE+V P+ATG EREELE LEG++IL+ D+P G FGTK+APAVV+S YDK+
Sbjct: 338 IQKRVEEVMPIATGQEREELEVALEGRDILDADHPVGLFGTKEAPAVVQSDYDKK 392
>gi|2995943|gb|AAC08397.1| cytochrome c oxidase subunit Vb precursor [Mesembryanthemum
crystallinum]
Length = 109
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 65/112 (58%), Gaps = 10/112 (8%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSAPVNPSIASRSLISRPLFA------SRHFSADSAGT 54
MWRR+ S LK LA + S S+ + AS + + P F SRHF+A S
Sbjct: 1 MWRRLVLSNLKT--LASSSSSSSSSSIVHRSASSIVRASPSFRPSSSIFSRHFAAASDNV 58
Query: 55 SVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSY 106
KR EDV P+ATGHEREELEAEL+GK+ILEI+Y K A+VKSY
Sbjct: 59 VSSKRPEDVMPIATGHEREELEAELQGKDILEINYQMLLAPRKS--AIVKSY 108
>gi|449017309|dbj|BAM80711.1| cytochrome c oxidase subunit Vb [Cyanidioschyzon merolae strain
10D]
Length = 209
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 67 ATGHEREELE-AELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER ELE +L N + GPFGT DAP +V+S Y+ RIVGC G ++HD+
Sbjct: 128 ATGLERLELEYPDLFKHN----EVIRGPFGTMDAPVMVESAYNSRIVGCTGPAAPNDHDL 183
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVV 150
W + K +P CP+C Q F L+ V
Sbjct: 184 YWLEVRKDQPAVCPLCEQVFTLKQV 208
>gi|426224085|ref|XP_004006204.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Ovis aries]
Length = 129
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 31 IASRSLISRPLFASRHFSADS-AGTSVKKRVEDVNPV------ATGHEREELEAELEGKN 83
+ASR L AS+ A G SV + V V ATG ERE + A +G++
Sbjct: 1 MASRLLRGAGALASQALRARGPNGVSVVRSVASGGGVPTDEEQATGLEREVMLAARKGQD 60
Query: 84 ILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQ 143
I P GTK+ P +V S +KRIVGC ED V+WFWL KG+ CP C
Sbjct: 61 PYNILAPKATSGTKEDPNLVPSISNKRIVGCIC--EEDNSTVIWFWLHKGEAQRCPSCGT 118
Query: 144 YFVL 147
++ L
Sbjct: 119 HYKL 122
>gi|345317645|ref|XP_001520188.2| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Ornithorhynchus anatinus]
Length = 187
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE L AE +G + + P G GT++ P +V S DKRIVGC ED V+
Sbjct: 102 ATGLEREILMAEKKGLDPYNLLAPKGAAGTREEPNLVPSITDKRIVGCIC--EEDNSAVI 159
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 160 WFWLHKGETQRCPNCGTHYKL 180
>gi|403301300|ref|XP_003941333.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Saimiri boliviensis boliviensis]
Length = 126
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + I P G GTK+ P +V S +KRIVGC E D V+
Sbjct: 41 ATGLEREIMLAARKGLDPYNILPPKGASGTKEDPNLVPSVTNKRIVGCICEE--DNSTVI 98
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C Y+ L
Sbjct: 99 WFWLHKGEAQRCPSCGAYYKL 119
>gi|387914584|gb|AFK10901.1| Cytochrome c oxidase subunit 5B, mitochondrial precursor
[Callorhinchus milii]
Length = 127
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 37 ISRPLFASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGT 96
+SR L S +AG + E ATG E+ ++A L+G++ + P GT
Sbjct: 16 LSRALGRSAPVRTMAAGGGIPTDEEQ----ATGLEKIIMQAALKGQDPYNLLKPKEYAGT 71
Query: 97 KDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
K P +V S DKRIVGC E D V+WFWL KG P CP C Y+ L
Sbjct: 72 KADPHIVPSITDKRIVGCVCEE--DNTVVIWFWLHKGNPCRCPSCGSYYKL 120
>gi|49456465|emb|CAG46553.1| COX5B [Homo sapiens]
Length = 129
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + + P G GT++ P +V S DKRIVGC ED VV
Sbjct: 44 ATGLEREIMLAAKKGLDPYNVLAPKGASGTREDPNLVPSISDKRIVGCIC--EEDNTSVV 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 102 WFWLHKGEAQRCPRCGAHYKL 122
>gi|60833885|gb|AAX37069.1| cytochrome c oxidase subunit Vb [synthetic construct]
Length = 130
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + + P G GT++ P +V S DKRIVGC ED VV
Sbjct: 44 ATGLEREIMLAAKKGLDPYNVLAPKGASGTREDPNLVPSISDKRIVGCIC--EEDNTSVV 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 102 WFWLHKGEAQRCPRCGAHYKL 122
>gi|77404292|ref|NP_001029218.1| cytochrome c oxidase subunit 5B, mitochondrial precursor [Bos
taurus]
gi|109940067|sp|P00428.2|COX5B_BOVIN RecName: Full=Cytochrome c oxidase subunit 5B, mitochondrial;
AltName: Full=Cytochrome c oxidase polypeptide VIa;
AltName: Full=Cytochrome c oxidase polypeptide Vb;
Flags: Precursor
gi|324357508|pdb|2Y69|F Chain F, Bovine Heart Cytochrome C Oxidase Re-Refined With
Molecular Oxygen
gi|324357521|pdb|2Y69|S Chain S, Bovine Heart Cytochrome C Oxidase Re-Refined With
Molecular Oxygen
gi|74268063|gb|AAI02580.1| Cytochrome c oxidase subunit Vb [Bos taurus]
gi|151556362|gb|AAI47856.1| COX5B protein [Bos taurus]
gi|296482788|tpg|DAA24903.1| TPA: cytochrome c oxidase subunit 5B, mitochondrial precursor [Bos
taurus]
Length = 129
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 31 IASRSLISRPLFASRHFSADS-AGTSVKKRVEDVNPV------ATGHEREELEAELEGKN 83
+ASR L AS+ A G SV + + V ATG ERE + A +G++
Sbjct: 1 MASRLLRGVGALASQALRARGPNGVSVVRSMASGGGVPTDEEQATGLEREVMLAARKGQD 60
Query: 84 ILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQ 143
I P GTK+ P +V S +KRIVGC ED V+WFWL KG+ CP C
Sbjct: 61 PYNILAPKATSGTKEDPNLVPSITNKRIVGCIC--EEDNSTVIWFWLHKGEAQRCPSCGT 118
Query: 144 YFVL 147
++ L
Sbjct: 119 HYKL 122
>gi|296194331|ref|XP_002744991.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Callithrix jacchus]
Length = 136
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + I P G GTK+ P +V S +KRIVGC E D V+
Sbjct: 51 ATGLEREIMLAARKGLDPYNILPPKGASGTKEDPNLVPSVTNKRIVGCICEE--DNSTVI 108
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C Y+ L
Sbjct: 109 WFWLHKGEAQRCPSCGAYYKL 129
>gi|426336507|ref|XP_004031511.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Gorilla gorilla gorilla]
Length = 182
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + I P G GT++ P +V S +KRIVGC ED VV
Sbjct: 97 ATGLEREIMLAAKKGLDPYNILAPKGASGTREDPNLVPSISNKRIVGCIC--EEDNTSVV 154
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 155 WFWLHKGEAQRCPRCGAHYKL 175
>gi|440909444|gb|ELR59354.1| Cytochrome c oxidase subunit 5B, mitochondrial [Bos grunniens
mutus]
Length = 129
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 31 IASRSLISRPLFASRHFSADS-AGTSVKKRVEDVNPV------ATGHEREELEAELEGKN 83
+ASR L AS+ A G SV + + V ATG ERE + A +G++
Sbjct: 1 MASRLLRGFGALASQALRARGPNGVSVVRSMASGGGVPTDEEQATGLEREVMLAARKGQD 60
Query: 84 ILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQ 143
I P GTK+ P +V S +KRIVGC ED V+WFWL KG+ CP C
Sbjct: 61 PYNILAPKATSGTKEDPNLVPSITNKRIVGCIC--EEDNSTVIWFWLHKGEAQRCPSCGT 118
Query: 144 YFVL 147
++ L
Sbjct: 119 HYKL 122
>gi|194220398|ref|XP_001493773.2| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Equus caballus]
Length = 129
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE L A +G + I P GTK+ P +V S +KRIVGC ED V+
Sbjct: 44 ATGLEREVLMAARKGLDPYNILAPKAASGTKEDPNLVPSITNKRIVGCIC--EEDNSAVI 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 102 WFWLHKGETQRCPSCGAHYKL 122
>gi|180937|gb|AAA52060.1| COX5B, partial [Homo sapiens]
gi|180941|gb|AAA52061.1| cytochrome c oxidase precursor (EC 1.9.3.1) [Homo sapiens]
Length = 129
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + + P G GT++ P +V S +KRIVGC ED VV
Sbjct: 44 ATGLEREIMLAAKKGLDPYNVLAPKGASGTREDPNLVPSISNKRIVGCIC--EEDNTSVV 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 102 WFWLHKGQAQRCPRCGAHYKL 122
>gi|223590|prf||0902159A oxidase IV,cytochrome
Length = 97
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G++ I P GTK+ P +V S +KRIVGC ED V+
Sbjct: 13 ATGLEREVMLAARKGQDPYNILAPKATSGTKEDPNLVPSITNKRIVGCI---QEDNSTVI 69
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 70 WFWLHKGEAQRCPSCGTHYKL 90
>gi|441676572|ref|XP_003282477.2| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
isoform 1 [Nomascus leucogenys]
Length = 182
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + I P G GT++ P +V S +KRIVGC ED VV
Sbjct: 97 ATGLEREVMLAAKKGLDPYNILAPKGASGTREDPNLVPSISNKRIVGCIC--EEDNTSVV 154
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 155 WFWLHKGEAQRCPRCGAHYKL 175
>gi|406867431|gb|EKD20469.1| subunit IV of cytochrome c oxidase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 191
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ +++G +I ++ GT D P +VKS+ D++ GC G D H+V
Sbjct: 75 ATGLERLEILGKMQGIDIFDMKPLDASRLGTLDNPIMVKSFGDEQYAGCTGFPA-DSHNV 133
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPPDGHGDDDH 164
+W + + +P E CP C +E VGP P HG D H
Sbjct: 134 IWLTMTRERPVERCPECGNVLKMEYVGPQDDPHAHGHDHH 173
>gi|332813880|ref|XP_001154903.2| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
isoform 1 [Pan troglodytes]
Length = 182
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + I P G GT++ P +V S KRIVGC ED VV
Sbjct: 97 ATGLEREIMLAAKKGLDPYNILAPKGASGTREDPNLVPSISSKRIVGCIC--EEDNTSVV 154
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 155 WFWLHKGEAQRCPRCGAHYKL 175
>gi|119622335|gb|EAX01930.1| cytochrome c oxidase subunit Vb [Homo sapiens]
Length = 182
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + + P G GT++ P +V S +KRIVGC ED VV
Sbjct: 97 ATGLEREIMLAAKKGLDPYNVLAPKGASGTREDPNLVPSISNKRIVGCIC--EEDNTSVV 154
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 155 WFWLHKGEAQRCPRCGAHYKL 175
>gi|395853680|ref|XP_003799332.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Otolemur garnettii]
Length = 130
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + + P G GTK+ P +V S DKRIVGC ED V+
Sbjct: 45 ATGLEREIMMAARKGLDPYNMLPPKGASGTKEDPNLVPSITDKRIVGCIC--EEDNSTVI 102
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 103 WFWLHKGEAQRCPNCGAHYKL 123
>gi|320165073|gb|EFW41972.1| hypothetical protein CAOG_07104 [Capsaspora owczarzaki ATCC 30864]
Length = 157
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 67 ATGHEREELEAELE----GKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDE 122
ATG ER+E++ ++ ++ TGP GTK P V+ S+YD RI C G EG
Sbjct: 58 ATGPERKEMDFLAHHPHGTQDPFGREHITGPLGTKTNPIVIPSHYDYRISACMGTEGT-P 116
Query: 123 HDVVWFWLEKGKPHECPVCSQYFVLEVVG 151
HD+ WF KG H C C+Q FVL+VV
Sbjct: 117 HDMAWFVALKGVMHRCNHCAQCFVLQVVA 145
>gi|17017988|ref|NP_001853.2| cytochrome c oxidase subunit 5B, mitochondrial precursor [Homo
sapiens]
gi|20141332|sp|P10606.2|COX5B_HUMAN RecName: Full=Cytochrome c oxidase subunit 5B, mitochondrial;
AltName: Full=Cytochrome c oxidase polypeptide Vb;
Flags: Precursor
gi|13623259|gb|AAH06229.1| Cytochrome c oxidase subunit Vb [Homo sapiens]
gi|30582323|gb|AAP35388.1| cytochrome c oxidase subunit Vb [Homo sapiens]
gi|60656153|gb|AAX32640.1| cytochrome c oxidase subunit Vb [synthetic construct]
gi|62988892|gb|AAY24279.1| unknown [Homo sapiens]
gi|124126833|gb|ABM92189.1| cytochrome c oxidase subunit Vb [synthetic construct]
gi|157927970|gb|ABW03281.1| cytochrome c oxidase subunit Vb [synthetic construct]
gi|208966106|dbj|BAG73067.1| cytochrome c oxidase subunit Vb [synthetic construct]
Length = 129
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + + P G GT++ P +V S +KRIVGC ED VV
Sbjct: 44 ATGLEREIMLAAKKGLDPYNVLAPKGASGTREDPNLVPSISNKRIVGCIC--EEDNTSVV 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 102 WFWLHKGEAQRCPRCGAHYKL 122
>gi|410329069|gb|JAA33481.1| cytochrome c oxidase subunit Vb [Pan troglodytes]
Length = 129
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + I P G GT++ P +V S KRIVGC ED VV
Sbjct: 44 ATGLEREIMLAAKKGLDPYNILAPKGASGTREDPNLVPSISSKRIVGCIC--EEDNTSVV 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 102 WFWLHKGEAQRCPRCGAHYKL 122
>gi|30584725|gb|AAP36615.1| Homo sapiens cytochrome c oxidase subunit Vb [synthetic construct]
gi|60653101|gb|AAX29245.1| cytochrome c oxidase subunit Vb [synthetic construct]
gi|60653103|gb|AAX29246.1| cytochrome c oxidase subunit Vb [synthetic construct]
Length = 130
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + + P G GT++ P +V S +KRIVGC ED VV
Sbjct: 44 ATGLEREIMLAAKKGLDPYNVLAPKGASGTREDPNLVPSISNKRIVGCIC--EEDNTSVV 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 102 WFWLHKGEAQRCPRCGAHYKL 122
>gi|75056763|sp|Q710D6.1|COX5B_VULVU RecName: Full=Cytochrome c oxidase subunit 5B, mitochondrial;
AltName: Full=Cytochrome c oxidase polypeptide Vb;
AltName: Full=Sperm protein 8; AltName: Full=fSP8;
Flags: Precursor
gi|40644927|emb|CAD19164.1| sperm protein 8 [Vulpes vulpes]
Length = 128
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + I P GTK+ P +V S +KRIVGC ED V+
Sbjct: 43 ATGLEREVMMAARKGLDPYNILAPKAAAGTKEDPNLVPSITNKRIVGCIC--EEDNSTVI 100
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 101 WFWLHKGEAQRCPSCGTHYKL 121
>gi|49456415|emb|CAG46528.1| COX5B [Homo sapiens]
gi|60824360|gb|AAX36677.1| cytochrome c oxidase subunit Vb [synthetic construct]
Length = 129
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + + P G GT++ P +V S +KRIVGC ED VV
Sbjct: 44 ATGLEREIMLAAKKGLDPYNVLAPKGASGTREDPNLVPSISNKRIVGCIC--EEDNTSVV 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 102 WFWLHKGEAQRCPRCGAHYKL 122
>gi|221136987|ref|NP_001137602.1| cytochrome c oxidase polypeptide Vb [Canis lupus familiaris]
gi|219937661|emb|CAJ97445.1| cytochrome c oxidase polypeptide Vb [Canis lupus familiaris]
Length = 128
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + I P GTK+ P +V S +KRIVGC ED V+
Sbjct: 43 ATGLEREVMMAARKGLDPYNILAPKAAAGTKEDPNLVPSITNKRIVGCIC--EEDNSTVI 100
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 101 WFWLHKGEAQRCPSCGTHYKL 121
>gi|397469068|ref|XP_003806186.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like [Pan
paniscus]
Length = 182
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + I P G GT++ P +V S KRIVGC ED V+
Sbjct: 97 ATGLEREIMLAAKKGLDPYNILAPKGASGTREDPNLVPSISSKRIVGCIC--EEDNTSVI 154
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 155 WFWLHKGEAQRCPRCGAHYKL 175
>gi|452823099|gb|EME30112.1| cytochrome c oxidase subunit Vb [Galdieria sulphuraria]
Length = 207
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 50 DSAGTSVKKRVEDVNPV----ATGHEREELEAELEGKN---ILEIDYPTGPFGTKDAPAV 102
DS G +K D P ATG ER ELE +N + PFGTK+ P +
Sbjct: 88 DSFGFQLKTGTPDRMPSSFDQATGSERAELEDPDLYRNPEKYVNSRVMIAPFGTKEKPLL 147
Query: 103 VKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPG 153
+ S YD RI+GC G E ++H+V + +++ CP+C Q F L+ V G
Sbjct: 148 IPSRYDSRIIGCTGREAPNDHEVYYMTVKENHDKVCPLCGQVFRLKKVAGG 198
>gi|402891639|ref|XP_003909050.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Papio anubis]
Length = 182
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + I P G GTK+ P +V S +KRIVGC ED V+
Sbjct: 97 ATGLEREVMLAARKGLDPYNILAPKGTSGTKEDPNLVPSVTNKRIVGCIC--EEDNTSVI 154
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G+ CP C ++ L
Sbjct: 155 WFWLHEGEAQRCPRCGAHYRL 175
>gi|109103898|ref|XP_001100566.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Macaca mulatta]
Length = 129
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + I P G GTK+ P +V S +KRIVGC ED V+
Sbjct: 44 ATGLEREVMLAARKGLDPYNILPPKGASGTKEDPNLVPSITNKRIVGCIC--EEDNTSVI 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G+ CP C ++ L
Sbjct: 102 WFWLREGEAQRCPRCGAHYKL 122
>gi|1942991|pdb|1OCC|F Chain F, Structure Of Bovine Heart Cytochrome C Oxidase At The
Fully Oxidized State
gi|1943004|pdb|1OCC|S Chain S, Structure Of Bovine Heart Cytochrome C Oxidase At The
Fully Oxidized State
gi|4389084|pdb|2OCC|F Chain F, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized
State
gi|4389097|pdb|2OCC|S Chain S, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized
State
gi|5822143|pdb|1OCO|F Chain F, Bovine Heart Cytochrome C Oxidase In Carbon Monoxide-bound
State
gi|5822156|pdb|1OCO|S Chain S, Bovine Heart Cytochrome C Oxidase In Carbon Monoxide-bound
State
gi|5822169|pdb|1OCR|F Chain F, Bovine Heart Cytochrome C Oxidase In The Fully Reduced
State
gi|5822182|pdb|1OCR|S Chain S, Bovine Heart Cytochrome C Oxidase In The Fully Reduced
State
gi|5822195|pdb|1OCZ|F Chain F, Bovine Heart Cytochrome C Oxidase In Azide-Bound State
gi|5822208|pdb|1OCZ|S Chain S, Bovine Heart Cytochrome C Oxidase In Azide-Bound State
gi|40889828|pdb|1V54|F Chain F, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized
State
gi|40889841|pdb|1V54|S Chain S, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized
State
gi|40889854|pdb|1V55|F Chain F, Bovine Heart Cytochrome C Oxidase At The Fully Reduced
State
gi|40889867|pdb|1V55|S Chain S, Bovine Heart Cytochrome C Oxidase At The Fully Reduced
State
gi|145579214|pdb|2DYR|F Chain F, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized
State
gi|145579227|pdb|2DYR|S Chain S, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized
State
gi|145579240|pdb|2DYS|F Chain F, Bovine Heart Cytochrome C Oxidase Modified By Dccd
gi|145579253|pdb|2DYS|S Chain S, Bovine Heart Cytochrome C Oxidase Modified By Dccd
gi|149241476|pdb|2EIJ|F Chain F, Bovine Heart Cytochrome C Oxidase In The Fully Reduced
State
gi|149241489|pdb|2EIJ|S Chain S, Bovine Heart Cytochrome C Oxidase In The Fully Reduced
State
gi|149241511|pdb|2EIK|F Chain F, Cadmium Ion Binding Structure Of Bovine Heart Cytochrome C
Oxidase In The Fully Reduced State
gi|149241524|pdb|2EIK|S Chain S, Cadmium Ion Binding Structure Of Bovine Heart Cytochrome C
Oxidase In The Fully Reduced State
gi|149241541|pdb|2EIL|F Chain F, Cadmium Ion Binding Structure Of Bovine Heart Cytochrome C
Oxidase In The Fully Oxidized State
gi|149241554|pdb|2EIL|S Chain S, Cadmium Ion Binding Structure Of Bovine Heart Cytochrome C
Oxidase In The Fully Oxidized State
gi|149241571|pdb|2EIM|F Chain F, Zinc Ion Binding Structure Of Bovine Heart Cytochrome C
Oxidase In The Fully Reduced State
gi|149241584|pdb|2EIM|S Chain S, Zinc Ion Binding Structure Of Bovine Heart Cytochrome C
Oxidase In The Fully Reduced State
gi|149241601|pdb|2EIN|F Chain F, Zinc Ion Binding Structure Of Bovine Heart Cytochrome C
Oxidase In The Fully Oxidized State
gi|149241614|pdb|2EIN|S Chain S, Zinc Ion Binding Structure Of Bovine Heart Cytochrome C
Oxidase In The Fully Oxidized State
gi|224036262|pdb|2ZXW|F Chain F, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized
State (1-S X-Ray Exposure Dataset)
gi|224036275|pdb|2ZXW|S Chain S, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized
State (1-S X-Ray Exposure Dataset)
gi|284055451|pdb|3ABL|F Chain F, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized
State (15-S X-Ray Exposure Dataset)
gi|284055464|pdb|3ABL|S Chain S, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized
State (15-S X-Ray Exposure Dataset)
gi|284055477|pdb|3ABM|F Chain F, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized
State (200-S X-Ray Exposure Dataset)
gi|284055490|pdb|3ABM|S Chain S, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized
State (200-S X-Ray Exposure Dataset)
gi|290789924|pdb|3ABK|F Chain F, Bovine Heart Cytochrome C Oxidase At The No-Bound Fully
Reduced State (50k)
gi|290789937|pdb|3ABK|S Chain S, Bovine Heart Cytochrome C Oxidase At The No-Bound Fully
Reduced State (50k)
gi|295321547|pdb|3AG1|F Chain F, Bovine Heart Cytochrome C Oxidase In The Carbon
Monoxide-Bou Reduced State At 280 K
gi|295321560|pdb|3AG1|S Chain S, Bovine Heart Cytochrome C Oxidase In The Carbon
Monoxide-Bou Reduced State At 280 K
gi|295321573|pdb|3AG2|F Chain F, Bovine Heart Cytochrome C Oxidase In The Carbon
Monoxide-Bou Reduced State At 100 K
gi|295321586|pdb|3AG2|S Chain S, Bovine Heart Cytochrome C Oxidase In The Carbon
Monoxide-Bou Reduced State At 100 K
gi|295321599|pdb|3AG3|F Chain F, Bovine Heart Cytochrome C Oxidase In The Nitric
Oxide-Bound Reduced State At 100 K
gi|295321612|pdb|3AG3|S Chain S, Bovine Heart Cytochrome C Oxidase In The Nitric
Oxide-Bound Reduced State At 100 K
gi|295321625|pdb|3AG4|F Chain F, Bovine Heart Cytochrome C Oxidase In The Cyanide Ion-Bound
F Reduced State At 100 K
gi|295321638|pdb|3AG4|S Chain S, Bovine Heart Cytochrome C Oxidase In The Cyanide Ion-Bound
F Reduced State At 100 K
gi|342350851|pdb|3ASN|F Chain F, Bovine Heart Cytochrome C Oxidase In The Fully Oxidized
State Measured At 1.7470 Angstrom Wavelength
gi|342350864|pdb|3ASN|S Chain S, Bovine Heart Cytochrome C Oxidase In The Fully Oxidized
State Measured At 1.7470 Angstrom Wavelength
gi|342350877|pdb|3ASO|F Chain F, Bovine Heart Cytochrome C Oxidase In The Fully Oxidized
State Measured At 0.9 Angstrom Wavelength
gi|342350890|pdb|3ASO|S Chain S, Bovine Heart Cytochrome C Oxidase In The Fully Oxidized
State Measured At 0.9 Angstrom Wavelength
gi|353251569|pdb|2YBB|Q Chain Q, Fitted Model For Bovine Mitochondrial Supercomplex
I1iii2iv1 By Single Particle Cryo-Em (Emd-1876)
Length = 98
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G++ I P GTK+ P +V S +KRIVGC ED V+
Sbjct: 13 ATGLEREVMLAARKGQDPYNILAPKATSGTKEDPNLVPSITNKRIVGCIC--EEDNSTVI 70
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 71 WFWLHKGEAQRCPSCGTHYKL 91
>gi|197632307|gb|ACH70877.1| cytochrome c oxidase subunit vb [Salmo salar]
gi|209736030|gb|ACI68884.1| Cytochrome c oxidase subunit 5B, mitochondrial precursor [Salmo
salar]
Length = 127
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ER L+A +GK+ I P GTK+ P +V DKR+VGC E D +V
Sbjct: 42 ATGLERRALQALKKGKDPWSILKPKEYAGTKEDPHIVPGISDKRLVGCLCEE--DNTAIV 99
Query: 127 WFWLEKGKPHECPVCSQYF 145
WFWL +GKP CP C ++
Sbjct: 100 WFWLHEGKPQRCPECGSHY 118
>gi|301753180|ref|XP_002912439.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 129
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE L A +G + + P GTK+ P +V S +KRIVGC ED V+
Sbjct: 44 ATGLEREVLMAARKGLDPYNMLAPKAAAGTKEDPNLVPSITNKRIVGCIC--EEDNSTVI 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 102 WFWLHKGEAQRCPSCGTHYKL 122
>gi|197100745|ref|NP_001124857.1| cytochrome c oxidase subunit 5B, mitochondrial precursor [Pongo
abelii]
gi|75042504|sp|Q5REG2.1|COX5B_PONAB RecName: Full=Cytochrome c oxidase subunit 5B, mitochondrial;
AltName: Full=Cytochrome c oxidase polypeptide Vb;
Flags: Precursor
gi|55726143|emb|CAH89845.1| hypothetical protein [Pongo abelii]
Length = 129
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + + P G GT++ P +V S +KRIVGC ED VV
Sbjct: 44 ATGLEREIMLAAKKGLDPYNVLAPKGASGTREDPNLVPSISNKRIVGCIC--EEDNTSVV 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 102 WFWLHKGEAQRCPRCGAHYKL 122
>gi|348571915|ref|XP_003471740.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Cavia porcellus]
Length = 129
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + I P GTK+ P +V S +KRIVGC ED V+
Sbjct: 44 ATGLEREVMLAAQKGLDPYNILAPKAASGTKEDPNLVPSISNKRIVGCIC--EEDNSTVI 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 102 WFWLHKGEAQRCPSCGTHYKL 122
>gi|55926217|ref|NP_001007518.1| cytochrome c oxidase subunit 5B, mitochondrial precursor [Sus
scrofa]
gi|75042739|sp|Q5S3G4.1|COX5B_PIG RecName: Full=Cytochrome c oxidase subunit 5B, mitochondrial;
AltName: Full=Cytochrome c oxidase polypeptide Vb;
Flags: Precursor
gi|55583747|gb|AAV53387.1| mitochondrial cytochrome c oxidase subunit Vb [Sus scrofa]
Length = 129
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + I P GTK+ P +V S +KRIVGC ED V+
Sbjct: 44 ATGLEREVMMAARKGLDPYNILAPKAASGTKEDPNLVPSITNKRIVGCIC--EEDNSTVI 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFW+ KG+ CP C ++ L
Sbjct: 102 WFWVHKGETQRCPSCGTHYKL 122
>gi|225704094|gb|ACO07893.1| Cytochrome c oxidase subunit 5B, mitochondrial precursor
[Oncorhynchus mykiss]
Length = 127
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ER L+A +GK+ I P GTK+ P +V DKR+VGC E D +V
Sbjct: 42 ATGLERHALQALKKGKDPWSILKPKEYAGTKEDPHIVPGISDKRLVGCLCEE--DNTAIV 99
Query: 127 WFWLEKGKPHECPVCSQYF 145
WFWL +GKP CP C ++
Sbjct: 100 WFWLHEGKPQRCPECGSHY 118
>gi|410954640|ref|XP_003983971.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Felis catus]
Length = 129
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + + P GTK+ P +V S +KRIVGC E D V+
Sbjct: 44 ATGLEREVMMAARKGLDPYNMLAPKAASGTKEDPNLVPSITNKRIVGCICEE--DNSAVI 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 102 WFWLHKGEAQRCPSCGTHYKL 122
>gi|355750325|gb|EHH54663.1| hypothetical protein EGM_15546 [Macaca fascicularis]
Length = 136
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + I P G GTK+ P +V S +KRIVGC ED VV
Sbjct: 51 ATGLEREVMLAARKGLDPYNILPPKGASGTKEDPNLVPSITNKRIVGCIC--EEDNTSVV 108
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G+ CP C ++ L
Sbjct: 109 WFWLHEGEAQRCPRCGAHYKL 129
>gi|148227910|ref|NP_001085056.1| cytochrome c oxidase subunit Vb, gene 2 [Xenopus laevis]
gi|47940292|gb|AAH72244.1| MGC82295 protein [Xenopus laevis]
Length = 131
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ER+ L+A +G + I P GTK+ P +V S KRIVGC ED ++
Sbjct: 46 ATGLERKTLQAMKKGLDPYSILKPKSYLGTKEDPHIVPSINKKRIVGCIC--EEDNSAII 103
Query: 127 WFWLEKGKPHECPVCSQYFVLE 148
WFW+ +G H CP C ++ LE
Sbjct: 104 WFWVHEGPAHRCPSCGAHYKLE 125
>gi|109079278|ref|XP_001098868.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Macaca mulatta]
Length = 136
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + I P G GTK+ P +V S +KRIVGC ED VV
Sbjct: 51 ATGLEREVMLAARKGLDPYNILPPKGASGTKEDPNLVPSITNKRIVGCIC--EEDNTSVV 108
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G+ CP C ++ L
Sbjct: 109 WFWLHEGEAQRCPRCGAHYKL 129
>gi|109108888|ref|XP_001099921.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
isoform 2 [Macaca mulatta]
Length = 129
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + I P G GTK+ P +V S +KRIVGC ED VV
Sbjct: 44 ATGLEREVMLAARKGLDPYNILPPKGASGTKEDPNLVPSITNKRIVGCIC--EEDNTSVV 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G+ CP C ++ L
Sbjct: 102 WFWLHEGEAQRCPRCGAHYKL 122
>gi|355751511|gb|EHH55766.1| hypothetical protein EGM_05033 [Macaca fascicularis]
Length = 129
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + I P G GTK+ P +V S +KRIVGC ED V+
Sbjct: 44 ATGLEREVMLAARKGLDPYNILPPKGASGTKEDPNLVPSITNKRIVGCIC--EEDNTSVI 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G+ CP C ++ L
Sbjct: 102 WFWLREGEAQRCPRCGAHYKL 122
>gi|225715742|gb|ACO13717.1| Cytochrome c oxidase subunit 5B, mitochondrial precursor [Esox
lucius]
Length = 127
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ER L+A +G++ I P GTKD P +V +KR+VGC E D +V
Sbjct: 42 ATGLERRALQALKKGRDPYSILKPKQYAGTKDDPHIVPGINNKRLVGCLCEE--DNTAIV 99
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G+P CP C +++
Sbjct: 100 WFWLHEGEPQRCPECGSHYLF 120
>gi|117104|sp|P19536.1|COX5B_MOUSE RecName: Full=Cytochrome c oxidase subunit 5B, mitochondrial;
AltName: Full=Cytochrome c oxidase polypeptide Vb;
Flags: Precursor
gi|50531|emb|CAA37313.1| unnamed protein product [Mus musculus]
gi|192924|gb|AAA37515.1| cytochrome c oxidase subunit Vb [Mus musculus]
Length = 128
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Query: 31 IASRSLISRPLFASRHFSADSAGTSVKKRVEDVNPV------ATGHEREELEAELEGKNI 84
+ASR L A++ + G +V + + V ATG ERE + A +G +
Sbjct: 1 MASRLLRGVGALAAQALRRTARGAAVTRSMASGGGVPTDEEQATGLEREIMIAAQKGLDP 60
Query: 85 LEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQY 144
+ P GTK+ P +V S +KRIVGC E D V+WFWL KG+ CP C +
Sbjct: 61 YNMLPPKAASGTKEDPNLVPSISNKRIVGCICEE--DNCTVIWFWLHKGESQRCPNCGTH 118
Query: 145 FVL 147
+ L
Sbjct: 119 YKL 121
>gi|281352605|gb|EFB28189.1| hypothetical protein PANDA_000173 [Ailuropoda melanoleuca]
Length = 95
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE L A +G + + P GTK+ P +V S +KRIVGC ED V+
Sbjct: 10 ATGLEREVLMAARKGLDPYNMLAPKAAAGTKEDPNLVPSITNKRIVGCIC--EEDNSTVI 67
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 68 WFWLHKGEAQRCPSCGTHYKL 88
>gi|355567111|gb|EHH23490.1| hypothetical protein EGK_06965, partial [Macaca mulatta]
Length = 128
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + I P G GTK+ P +V S +KR+VGC ED VV
Sbjct: 43 ATGLEREVMLAARKGLDPYNILPPKGASGTKEDPNLVPSITNKRVVGCIC--EEDNTSVV 100
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G+ CP C ++ L
Sbjct: 101 WFWLHEGEAQRCPRCGAHYKL 121
>gi|380794635|gb|AFE69193.1| cytochrome c oxidase subunit 5B, mitochondrial precursor, partial
[Macaca mulatta]
Length = 101
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + I P G GTK+ P +V S +KRIVGC ED V+
Sbjct: 16 ATGLEREVMLAARKGLDPYNILPPKGASGTKEDPNLVPSITNKRIVGCIC--EEDNTSVI 73
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G+ CP C ++ L
Sbjct: 74 WFWLREGEAQRCPRCGAHYKL 94
>gi|110645542|gb|AAI18884.1| LOC733498 protein [Xenopus (Silurana) tropicalis]
Length = 136
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 17 LAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVKKRVEDVNPVATGHEREELE 76
L Q R+ P N + ++R +F R S T ++ ATG ER+ L+
Sbjct: 11 LCQLFYRALPRNAAAPRTVYLNRSVF--RAMSVGGIPTDEEQ--------ATGLERKTLQ 60
Query: 77 AELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPH 136
A +G + I P GTK+ P +V S KRIVGC ED ++WFW+ +G
Sbjct: 61 AMKKGLDPYSILKPKSYLGTKEDPHIVPSINKKRIVGCIC--EEDNSAIIWFWVHEGPAQ 118
Query: 137 ECPVCSQYFVLE 148
CP C ++ LE
Sbjct: 119 RCPSCGAHYKLE 130
>gi|432906476|ref|XP_004077550.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Oryzias latipes]
Length = 128
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ER +EA +GK+ I P GTK+ P +V S +KR+VGC ED +V
Sbjct: 43 ATGLERATMEALKQGKDPYSILKPKHYTGTKEDPHIVPSIGNKRLVGCLC--EEDNTAIV 100
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G+ CP C ++ L
Sbjct: 101 WFWLHEGEAQRCPSCGSHYKL 121
>gi|432089126|gb|ELK23206.1| Cytochrome c oxidase subunit 5B, mitochondrial [Myotis davidii]
Length = 129
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G++ + P GTK+ P +V S +KRIVGC ED V+
Sbjct: 44 ATGLEREVMLAARKGQDPYNMLAPKPASGTKEDPNLVPSITNKRIVGCIC--EEDNSAVI 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFW+ KG+ CP C ++ L
Sbjct: 102 WFWVHKGETQRCPSCGTHYKL 122
>gi|301614863|ref|XP_002936901.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial [Xenopus
(Silurana) tropicalis]
gi|89269929|emb|CAJ81708.1| Novel protein similar to cytochrome c oxidase subunit Vb [Xenopus
(Silurana) tropicalis]
gi|165970833|gb|AAI58297.1| LOC733498 protein [Xenopus (Silurana) tropicalis]
Length = 131
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 17 LAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVKKRVEDVNPVATGHEREELE 76
L Q R+ P N + ++R +F R S T ++ ATG ER+ L+
Sbjct: 6 LCQLFYRALPRNAAAPRTVYLNRSVF--RAMSVGGIPTDEEQ--------ATGLERKTLQ 55
Query: 77 AELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPH 136
A +G + I P GTK+ P +V S KRIVGC ED ++WFW+ +G
Sbjct: 56 AMKKGLDPYSILKPKSYLGTKEDPHIVPSINKKRIVGCIC--EEDNSAIIWFWVHEGPAQ 113
Query: 137 ECPVCSQYFVLE 148
CP C ++ LE
Sbjct: 114 RCPSCGAHYKLE 125
>gi|170099123|ref|XP_001880780.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644305|gb|EDR08555.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 155
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 67 ATGHEREELEAELEGKNILEIDYP--TGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHD 124
ATG ER +L ELEG ++ + D P + GTK P +V SY +R+VGC G D HD
Sbjct: 62 ATGLERLQLLGELEGIDVFD-DSPLDSSRIGTKADPILVPSYDVERMVGCSGSPA-DSHD 119
Query: 125 VVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
V+WF L K K C C + L+ G + H D HH
Sbjct: 120 VLWFMLRKEKIARCTECGSVYKLDFHG-----EEHADAHHH 155
>gi|431913042|gb|ELK14792.1| Cytochrome c oxidase subunit 5B, mitochondrial [Pteropus alecto]
Length = 129
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + + P GTK+ P +V S +KRIVGC E D V+
Sbjct: 44 ATGLEREVMMAARKGLDPYNMLAPKPASGTKEDPNLVPSITNKRIVGCICEE--DNSAVI 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 102 WFWLHKGETQRCPNCGTHYKL 122
>gi|291386253|ref|XP_002710052.1| PREDICTED: mCG18900-like [Oryctolagus cuniculus]
Length = 129
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + + P GTK+ P +V S +KRIVGC E D V+
Sbjct: 44 ATGLEREVMMAARKGLDPYNMLPPKAASGTKEDPNLVPSITNKRIVGCICEE--DNSAVI 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 102 WFWLHKGETQRCPNCGTHYKL 122
>gi|393231487|gb|EJD39079.1| COX5B-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 152
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 12/147 (8%)
Query: 17 LAQYSCRSAPVNPSIASR--SLISRPLFASRHFSADSAGTSV-------KKRVEDVNPVA 67
+ + + R+APV +ASR ++R L + ++D A + V A
Sbjct: 1 MLRLATRAAPVRALLASRPRMQVARALSVTARAASDHAAEPIVVGKGAPAGEVPTSQQQA 60
Query: 68 TGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSY-YDKRIVGCPGGEGEDEHDV 125
TG ER +L E+EG+ ++D GT P +VKSY Y +R+VGC G E H+
Sbjct: 61 TGLERLQLVGEMEGQEFFDMDPLYIDRIGTLKDPILVKSYGYRERLVGCTGFPVES-HET 119
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVGP 152
+W + + H CP C F L+V P
Sbjct: 120 IWLNCDDKRTHRCPECGCAFKLDVGTP 146
>gi|118490698|ref|XP_001238658.1| cytochrome c oxidase subunit, putative [Eimeria tenella strain
Houghton]
gi|109238441|emb|CAK51405.1| cytochrome c oxidase subunit, putative [Eimeria tenella]
Length = 220
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%)
Query: 55 SVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGC 114
S K+ D+ E + + LE L+ GPFGT P +V S + +RIVGC
Sbjct: 28 SYKQLARDMGLQIVTEENQHMVGLLELYEYLKTAPFVGPFGTTQNPVLVPSVHTERIVGC 87
Query: 115 PGGEGEDEHDVVWFWLEKGKPHECPVCSQYFV 146
GG GEDEH +WF +G + C C Q F+
Sbjct: 88 TGGTGEDEHYPLWFRCREGFLYRCGECDQIFM 119
>gi|33339189|gb|AAQ14275.1|AF255351_1 cytochrome c oxidase subunit Vb precursor [Oncorhynchus mykiss]
Length = 127
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ER L+A +GK+ I P GTK+ P +V DKR+VGC ED +V
Sbjct: 42 ATGLERRALQALKKGKDPWSILKPKEYAGTKEDPHIVPGISDKRLVGCLC--EEDNTAIV 99
Query: 127 WFWLEKGKPHECPVCSQYF 145
WFWL +GK CP C ++
Sbjct: 100 WFWLHEGKTQRCPECGSHY 118
>gi|440895880|gb|ELR47955.1| hypothetical protein M91_12035, partial [Bos grunniens mutus]
Length = 120
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
Query: 31 IASRSLISRPLFASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEGKNILEIDYP 90
+AS++L +R + ++G SV E ATG ERE + A +G++ I P
Sbjct: 2 LASQALRARGPNGVSVVRSMASGGSVPTDEEQ----ATGLEREVMLAARKGQDPYNILAP 57
Query: 91 TGPFGTKDAPAV-VKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
GTK+ P V V S +KR VGC E D V+WFWL KG+ +CP C ++ L
Sbjct: 58 KATSGTKEDPNVPVPSITNKRTVGCICEE--DNSTVIWFWLHKGEAQQCPSCGTHYKL 113
>gi|327285498|ref|XP_003227470.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Anolis carolinensis]
Length = 120
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ER+ ++A +G + + P GTK+ P +V S DKRIVGC E D V+
Sbjct: 36 ATGLERKVMKALQQGLDPYSMFPPKPRAGTKEDPNIVPSITDKRIVGCICEE--DNSAVI 93
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFW+ KG+ H CP C ++ L
Sbjct: 94 WFWVHKGELHRCPSCGTHYKL 114
>gi|112807195|ref|NP_034072.2| cytochrome c oxidase subunit 5B, mitochondrial [Mus musculus]
gi|149263037|ref|XP_001475467.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like [Mus
musculus]
gi|12842467|dbj|BAB25614.1| unnamed protein product [Mus musculus]
gi|66365720|gb|AAH96048.1| Cytochrome c oxidase, subunit Vb [Mus musculus]
gi|71051226|gb|AAH99474.1| Cytochrome c oxidase, subunit Vb [Mus musculus]
gi|74152883|dbj|BAE22451.1| unnamed protein product [Mus musculus]
gi|74199859|dbj|BAE20757.1| unnamed protein product [Mus musculus]
gi|148682556|gb|EDL14503.1| mCG17741, isoform CRA_d [Mus musculus]
gi|148700700|gb|EDL32647.1| mCG23026 [Mus musculus]
Length = 129
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + + P GTK+ P +V S +KRIVGC E D V+
Sbjct: 44 ATGLEREIMIAAQKGLDPYNMLPPKAASGTKEDPNLVPSISNKRIVGCICEE--DNCTVI 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 102 WFWLHKGESQRCPNCGTHYKL 122
>gi|148705042|gb|EDL36989.1| mCG18900 [Mus musculus]
Length = 145
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + + P GTK+ P +V S +KRIVGC E D V+
Sbjct: 60 ATGLEREIMIAAQKGLDPYNMLPPKAASGTKEDPNLVPSISNKRIVGCICEE--DNCTVI 117
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 118 WFWLHKGESQRCPNCGTHYKL 138
>gi|384488064|gb|EIE80244.1| hypothetical protein RO3G_04949 [Rhizopus delemar RA 99-880]
Length = 148
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER EL A LEGK + +++ GT P VVKS+ R VGC G E HD
Sbjct: 56 STGLERMELLATLEGKQLFDMEPLNMTHLGTVKNPIVVKSHDPIRFVGCTGFPAES-HDT 114
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
+W L+K H+ CP C + ++ VG ++DHH
Sbjct: 115 IWINLDKSHEHDRCPECGSVYTMDFVG--------SEEDHH 147
>gi|126303451|ref|XP_001379873.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Monodelphis domestica]
Length = 128
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A + + P GTK+ P +V S DKRIVGC E D V+
Sbjct: 43 ATGLEREIMLAARNDLDPYNMLAPKAAPGTKEEPNLVPSITDKRIVGCICEE--DNSAVI 100
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 101 WFWLHKGETQRCPNCGTHYKL 121
>gi|260827379|ref|XP_002608642.1| hypothetical protein BRAFLDRAFT_172198 [Branchiostoma floridae]
gi|229293994|gb|EEN64652.1| hypothetical protein BRAFLDRAFT_172198 [Branchiostoma floridae]
Length = 119
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 10/121 (8%)
Query: 31 IASRSLISRPLFAS-RHFSADSAGTSVKKRVEDVNPV----ATGHEREELEAELEG-KNI 84
+ASR L+ R +F+S R A T V+ P ATG E+ EL+A+ G +
Sbjct: 1 MASR-LLCRQIFSSVRRAVVPPAATGVRNMAVGGVPTDEEQATGLEKRELDAKKAGIADP 59
Query: 85 LEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQY 144
++ T P GT+D+P +V S Y++R+VGC ED + W WLEKG+ C C +
Sbjct: 60 FSMEINTTPPGTRDSPCMVPSIYERRLVGCVC--EEDATYIQWMWLEKGEAQRCE-CGHW 116
Query: 145 F 145
F
Sbjct: 117 F 117
>gi|330803497|ref|XP_003289742.1| hypothetical protein DICPUDRAFT_56297 [Dictyostelium purpureum]
gi|325080176|gb|EGC33743.1| hypothetical protein DICPUDRAFT_56297 [Dictyostelium purpureum]
Length = 120
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 91 TGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
TGPFGT P +V+S Y+ RI+ C GG+GE EHDV++ L + KP C C Q F L+ +
Sbjct: 53 TGPFGTLKTPVIVESIYNSRIIACEGGDGE-EHDVLFHNLGQKKPTICLECGQVFKLKHI 111
Query: 151 GPGG 154
G
Sbjct: 112 SSEG 115
>gi|125825023|ref|XP_001342184.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Danio rerio]
Length = 127
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ER +EA +G + I P G+K P +V S KRIVGC E D VV
Sbjct: 42 ATGLERIVMEASKKGLDPYNILKPKEYAGSKQDPHIVPSISTKRIVGCVCEE--DNTAVV 99
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G+ CP C Y+ L
Sbjct: 100 WFWLHQGEAQRCPSCGAYYKL 120
>gi|473729|dbj|BAA01743.1| cytochrome c oxidase subunit Vb [Rattus norvegicus]
Length = 129
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A G + + P GTK+ P +V S +KRIVGC ED V+
Sbjct: 44 ATGLEREIMIAAQRGLDPYNMLPPKAASGTKEDPNLVPSVSNKRIVGCIC--EEDNCTVI 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G+ CP C ++ L
Sbjct: 102 WFWLHQGQSQRCPNCGTHYKL 122
>gi|308322119|gb|ADO28197.1| mitochondrial cytochrome c oxidase subunit 5b [Ictalurus furcatus]
gi|308323261|gb|ADO28767.1| mitochondrial cytochrome c oxidase subunit 5b [Ictalurus punctatus]
Length = 125
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG E++ L++ G + + P G+KD P +V S +KRIVGC E D +V
Sbjct: 40 ATGLEKKILKSFKAGADPYSVLKPKQYAGSKDDPHIVPSINNKRIVGCVCEE--DNTAIV 97
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G+P CP C ++ L
Sbjct: 98 WFWLHEGEPQRCPSCGSHYKL 118
>gi|62858943|ref|NP_001016250.1| cytochrome c oxidase subunit Vb, gene 1 [Xenopus (Silurana)
tropicalis]
gi|89267432|emb|CAJ83989.1| Novel protein similar to cytochrome c oxidase subunit Vb [Xenopus
(Silurana) tropicalis]
gi|195539862|gb|AAI68140.1| hypothetical protein LOC549004 [Xenopus (Silurana) tropicalis]
gi|213625452|gb|AAI70641.1| hypothetical protein LOC549004 [Xenopus (Silurana) tropicalis]
gi|213625454|gb|AAI70645.1| hypothetical protein LOC549004 [Xenopus (Silurana) tropicalis]
Length = 126
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG E++ + A +G + I+ P GTK+ P +V S +KRIVGC ED V+
Sbjct: 41 ATGLEKKVMAAIKKGTDPYSIEKPQQYAGTKEDPHIVPSITNKRIVGCIC--EEDNTAVI 98
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G+ CP C ++ L
Sbjct: 99 WFWLHEGEAQRCPSCGSHYKL 119
>gi|395507010|ref|XP_003757821.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Sarcophilus harrisii]
Length = 212
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A + + P GT++ P +V S DKRIVGC E D V+
Sbjct: 127 ATGLEREIMMAARNDLDPYNMYAPKAAPGTQEEPNLVPSITDKRIVGCICEE--DNSAVI 184
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 185 WFWLHKGETQRCPNCGTHYKL 205
>gi|354472222|ref|XP_003498339.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Cricetulus griseus]
gi|344250345|gb|EGW06449.1| Cytochrome c oxidase subunit 5B, mitochondrial [Cricetulus griseus]
Length = 129
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + + P GTK+ P +V S +KRIVGC E D V+
Sbjct: 44 ATGLEREIMIAAEKGLDPYNMLPPKAASGTKEDPNLVPSITNKRIVGCICEE--DNCTVI 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 102 WFWLHKGEVQRCPSCGTHYKL 122
>gi|16758362|ref|NP_446038.1| cytochrome c oxidase subunit 5B, mitochondrial precursor [Rattus
norvegicus]
gi|1352167|sp|P12075.2|COX5B_RAT RecName: Full=Cytochrome c oxidase subunit 5B, mitochondrial;
AltName: Full=Cytochrome c oxidase polypeptide Vb;
AltName: Full=Cytochrome c oxidase subunit VIA*; Flags:
Precursor
gi|493695|dbj|BAA01744.1| cytochrome c oxidase subunit Vb [Rattus norvegicus]
gi|53237117|gb|AAH83179.1| Cytochrome c oxidase subunit Vb [Rattus norvegicus]
gi|149046369|gb|EDL99262.1| cytochrome c oxidase subunit Vb, isoform CRA_c [Rattus norvegicus]
Length = 129
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A G + + P GTK+ P +V S +KRIVGC ED V+
Sbjct: 44 ATGLEREIMIAAQRGLDPYNMLPPKAASGTKEDPNLVPSVSNKRIVGCIC--EEDNCTVI 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G+ CP C ++ L
Sbjct: 102 WFWLHQGESQRCPNCGTHYKL 122
>gi|410900472|ref|XP_003963720.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Takifugu rubripes]
Length = 127
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 34 RSLISRPLFASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGP 93
R+L +RPL + + K + ATG ER L+A GK+ + P
Sbjct: 18 RNLTARPLHRA---------MATLKGIPTDEEQATGLERRALQALKLGKDPYSMLKPKEY 68
Query: 94 FGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
GTK+ P +V S +KR+VGC ED +VWFWL +G CP C ++ L
Sbjct: 69 AGTKEDPHIVPSTVNKRLVGCLC--EEDNTAIVWFWLHEGPSQRCPSCGSHYKL 120
>gi|384495835|gb|EIE86326.1| hypothetical protein RO3G_11037 [Rhizopus delemar RA 99-880]
Length = 148
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER EL A LEGK + +++ GT P VVKS+ R VGC G E HD
Sbjct: 56 STGLERMELLATLEGKQLFDMEPLNMTHLGTVKNPIVVKSHDPIRFVGCTGFPAES-HDT 114
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVG 151
+W L+K H+ CP C + ++ VG
Sbjct: 115 IWINLDKSHEHDRCPECGSVYTMDFVG 141
>gi|169859476|ref|XP_001836377.1| cytochrome c oxidase polypeptide IV [Coprinopsis cinerea
okayama7#130]
gi|116502550|gb|EAU85445.1| cytochrome c oxidase polypeptide IV [Coprinopsis cinerea
okayama7#130]
Length = 154
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 67 ATGHEREELEAELEGKNILEIDYP--TGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHD 124
ATG ER +L ELEG N+ + D P + GTK P V SY +R++GC G D HD
Sbjct: 62 ATGIERLQLLGELEGVNVFD-DSPLDSSRIGTKADPIKVLSYDVERMIGCTGSPA-DSHD 119
Query: 125 VVWFWLEKGKPHECPVCSQYFVLEVVG 151
V WF + K K C C + L+ G
Sbjct: 120 VTWFMVNKDKISRCVECGSVYALDFRG 146
>gi|55992|emb|CAA32425.1| cytochrome c oxidase subunit VIa (AA 1 - 118) [Rattus norvegicus]
Length = 117
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A G + + P GTK+ P +V S +KRIVGC ED V+
Sbjct: 32 ATGLEREIMIAAQRGLDPYNMLPPKAASGTKEDPNLVPSVSNKRIVGCIC--EEDNCTVI 89
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G+ CP C ++ L
Sbjct: 90 WFWLHQGESQRCPNCGTHYKL 110
>gi|288856322|ref|NP_001165813.1| cytochrome c oxidase subunit 5B, mitochondrial [Nasonia
vitripennis]
Length = 122
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Query: 35 SLISRPLF-ASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEGKN--ILEIDYPT 91
SL R +F +R SA S+++++ D ATG E+ E+ AEL G +
Sbjct: 3 SLCRRAIFQVARRPLHMSACRSMEEKMADPLDHATGIEKAEMLAELAGNDDPFDTKVMKR 62
Query: 92 GPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
GP GTK+ P +V S++ R+VGC ED+ V W WL KGKP C C +F L
Sbjct: 63 GP-GTKECPNLVGSFFKSRLVGCIC--EEDQLHVNWMWLHKGKPRRCE-CGHWFKL 114
>gi|237840775|ref|XP_002369685.1| cytochrome c oxidase, putative [Toxoplasma gondii ME49]
gi|211967349|gb|EEB02545.1| cytochrome c oxidase, putative [Toxoplasma gondii ME49]
gi|221503306|gb|EEE29004.1| cytochrome C oxidase, putative [Toxoplasma gondii VEG]
Length = 310
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 43/93 (46%)
Query: 55 SVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGC 114
S K+ D+ E E + LE L GPFGT + P + S RIVGC
Sbjct: 140 SYKQLARDMGMQIVTEETEHMVGLLELYEHLRAAAFVGPFGTVEKPVLCPSVTTDRIVGC 199
Query: 115 PGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
GG GE EH +WF +G + C C Q F+L
Sbjct: 200 TGGTGEKEHVPLWFRCREGFLYRCGECDQIFML 232
>gi|384250024|gb|EIE23504.1| hypothetical protein COCSUDRAFT_53359 [Coccomyxa subellipsoidea
C-169]
Length = 161
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ER E+E +L K+I D+ PFGT+D P V S + +RIVG P + D+ +
Sbjct: 72 ATGLERAEMEGQLHNKDIFHEDWLDAPFGTEDKPVEVTSSFSERIVGVP--DPYDDSIIW 129
Query: 127 WFWLEKGKPHECPV-CSQYFVLEVVGPGGPPDGH 159
W +E+G+P + V ++FVL+ V GG GH
Sbjct: 130 WGHIEEGQPPKQLVEGGEFFVLKRV--GGDSHGH 161
>gi|95007405|emb|CAJ20625.1| cytochrome c oxidase subunit, putative [Toxoplasma gondii RH]
gi|221482902|gb|EEE21233.1| hypothetical protein TGGT1_022310 [Toxoplasma gondii GT1]
Length = 310
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 43/93 (46%)
Query: 55 SVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGC 114
S K+ D+ E E + LE L GPFGT + P + S RIVGC
Sbjct: 140 SYKQLARDMGMQIVTEETEHMVGLLELYEHLRAAAFVGPFGTVEKPVLCPSVTTDRIVGC 199
Query: 115 PGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
GG GE EH +WF +G + C C Q F+L
Sbjct: 200 TGGTGEKEHVPLWFRCREGFLYRCGECDQIFML 232
>gi|449303710|gb|EMC99717.1| hypothetical protein BAUCODRAFT_83035 [Baudoinia compniacensis UAMH
10762]
Length = 207
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ +++G +I ++ GT P VVKS+ D++ +GC G D H+V
Sbjct: 79 ATGLERLEILGKMQGVDIFDMRPLDASRRGTLQDPIVVKSFGDEQYLGCTGSPA-DSHNV 137
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPPDGHG 160
+W + + +P E CP C + +E VGP D HG
Sbjct: 138 LWLTVSRDRPVERCPECGSAYKMEYVGPPESHDAHG 173
>gi|113679439|ref|NP_001038822.1| cytochrome c oxidase subunit Vb 2 [Danio rerio]
gi|112418752|gb|AAI22443.1| Zgc:153978 [Danio rerio]
gi|182890820|gb|AAI65491.1| Zgc:153978 protein [Danio rerio]
Length = 126
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
A G ER L+A +G++ I P GT++ P +V S +KR+VGC E D +V
Sbjct: 41 AAGLERRVLQAMKKGQDPYSILRPKQYTGTREDPHIVPSINNKRLVGCLCEE--DNTAIV 98
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G CP C ++ L
Sbjct: 99 WFWLHEGNSQRCPSCGSHYKL 119
>gi|348507115|ref|XP_003441102.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Oreochromis niloticus]
Length = 127
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ER L+A +GK+ I P GTK+ P +V KR+VGC ED +V
Sbjct: 42 ATGLERRTLQALKQGKDPYSILKPKHYAGTKEDPHIVPGIGTKRLVGCLC--EEDNTAIV 99
Query: 127 WFWLEKGKPHECPVCSQYF 145
WFWL +G+ CP C ++
Sbjct: 100 WFWLHEGEAQRCPSCGSHY 118
>gi|33339199|gb|AAQ14280.1|AF255356_1 cytochrome c oxidase subunit Vb precursor [Scombridae gen. sp.]
Length = 126
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ER L+A +GK+ I P GTK+ P +V KR+VGC ED +V
Sbjct: 41 ATGLERRTLQAFKQGKDPYSILKPKQHAGTKEDPHIVPCIGTKRLVGCLC--EEDNTAIV 98
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G CP C ++ L
Sbjct: 99 WFWLHEGAGERCPSCGSHYKL 119
>gi|401396825|ref|XP_003879915.1| hypothetical protein NCLIV_003650 [Neospora caninum Liverpool]
gi|325114323|emb|CBZ49880.1| hypothetical protein NCLIV_003650 [Neospora caninum Liverpool]
Length = 336
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 43/93 (46%)
Query: 55 SVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGC 114
S K+ D+ E E + LE L GPFGT + P + S RIVGC
Sbjct: 166 SYKQLARDMGMQIVTEETEHMVGLLELYEHLRAAAFVGPFGTIEKPVLCPSVTTDRIVGC 225
Query: 115 PGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
GG GE EH +WF +G + C C Q F+L
Sbjct: 226 TGGTGEKEHVPLWFRCREGFLYRCGECDQIFML 258
>gi|242091922|ref|XP_002436451.1| hypothetical protein SORBIDRAFT_10g002915 [Sorghum bicolor]
gi|241914674|gb|EER87818.1| hypothetical protein SORBIDRAFT_10g002915 [Sorghum bicolor]
Length = 39
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 30/33 (90%)
Query: 98 DAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWL 130
+APAV++SYY+KRIVGCPGGEGEDEHDVV +
Sbjct: 1 EAPAVIQSYYNKRIVGCPGGEGEDEHDVVMVLV 33
>gi|440466376|gb|ELQ35648.1| cytochrome c oxidase polypeptide IV [Magnaporthe oryzae Y34]
gi|440489160|gb|ELQ68836.1| cytochrome c oxidase polypeptide IV [Magnaporthe oryzae P131]
Length = 216
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPF-GTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER E+ ++EG +I + P+ GT + P +V+S +++ VGC G +D H+V
Sbjct: 102 STGLERLEILGKMEGIDIFNMKPLDAPYKGTIEKPVMVRSAGEEQFVGCTGFP-KDSHEV 160
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVG 151
+W ++K +P E CP C F +E VG
Sbjct: 161 LWLGMDKKRPVERCPECGSVFKMEFVG 187
>gi|378729856|gb|EHY56315.1| cytochrome c oxidase subunit Vb [Exophiala dermatitidis NIH/UT8656]
Length = 190
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ +++G ++ ++ P+ GT + P VVKS ++ VGC G D H V
Sbjct: 76 ATGLERLEILGKMQGIDVFDMSPLPSDRIGTFENPIVVKSAGEEMQVGCTGSPA-DSHIV 134
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
W + + +P E CP C + +E +GP D HG DHH
Sbjct: 135 KWLVMSRDRPFERCPECGSVYRMEYIGPAD--DHHG--DHH 171
>gi|344306761|ref|XP_003422053.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Loxodonta africana]
Length = 129
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + + P GT + P +V S +KR+VGC E D V+
Sbjct: 44 ATGLEREVMLAARKGLDPYNLLPPKAAAGTLEDPNLVPSITNKRLVGCICEE--DNSVVI 101
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL KG+ CP C ++ L
Sbjct: 102 WFWLHKGEAQRCPGCGTHYKL 122
>gi|389640317|ref|XP_003717791.1| cytochrome c oxidase polypeptide IV [Magnaporthe oryzae 70-15]
gi|351640344|gb|EHA48207.1| cytochrome c oxidase polypeptide IV [Magnaporthe oryzae 70-15]
Length = 186
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPF-GTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER E+ ++EG +I + P+ GT + P +V+S +++ VGC G +D H+V
Sbjct: 72 STGLERLEILGKMEGIDIFNMKPLDAPYKGTIEKPVMVRSAGEEQFVGCTGFP-KDSHEV 130
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVG 151
+W ++K +P E CP C F +E VG
Sbjct: 131 LWLGMDKKRPVERCPECGSVFKMEFVG 157
>gi|47228591|emb|CAG05411.1| unnamed protein product [Tetraodon nigroviridis]
Length = 98
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG E+ L A EG + + P G+K P +V S +KRIVGC E D VV
Sbjct: 13 ATGLEKIILTAMKEGADPYSMMKPKEYAGSKTDPHLVPSITNKRIVGCVCEE--DNTAVV 70
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G+P CP C ++ L
Sbjct: 71 WFWLHEGEPQRCPSCGAHYKL 91
>gi|297493728|gb|ADI40586.1| cytochrome c oxidase subunit Vb [Cynopterus sphinx]
Length = 113
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + + P GTK+ P +V S +KRIVGC ED V+
Sbjct: 43 ATGLEREVMMAARKGLDPYNMLAPKPASGTKEDPNLVPSISNKRIVGCIC--EEDNSAVI 100
Query: 127 WFWLEKGKPHECP 139
WFWL KG+ CP
Sbjct: 101 WFWLHKGETQRCP 113
>gi|328868732|gb|EGG17110.1| cytochrome c oxidase subunit V [Dictyostelium fasciculatum]
Length = 289
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 94 FGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
FGT +P +V+S +D RIVGC GG+GE EHD+V+ L KP C C Q F L+ +
Sbjct: 225 FGTIKSPVIVESIFDNRIVGCEGGDGE-EHDLVFHKLTAKKPIICVDCGQAFKLKKI 280
>gi|426199398|gb|EKV49323.1| COX5B subunit VB of cytochrome c oxidase [Agaricus bisporus var.
bisporus H97]
Length = 153
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPF-----GTKDAPAVVKSYYDKRIVGCPGGEGED 121
+TG ER +L E+EG N+ E GP GT+ P V SY +RI+GC G D
Sbjct: 61 STGLERLQLLGEIEGINVFE----EGPLDSSRIGTRADPVRVPSYDVERIIGCTGSPA-D 115
Query: 122 EHDVVWFWLEKGKPHECPVCSQYFVLEVVG 151
HD+ WF L + + C C ++ L+ +G
Sbjct: 116 SHDITWFTLRQHQLGRCKECGSFYNLDYLG 145
>gi|409078406|gb|EKM78769.1| COX5B subunit VB of cytochrome c oxidase [Agaricus bisporus var.
burnettii JB137-S8]
Length = 153
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPF-----GTKDAPAVVKSYYDKRIVGCPGGEGED 121
+TG ER +L E+EG N+ E GP GT+ P V SY +RI+GC G D
Sbjct: 61 STGLERLQLLGEIEGINVFE----EGPLDSSRIGTRADPVRVPSYDVERIIGCTGSPA-D 115
Query: 122 EHDVVWFWLEKGKPHECPVCSQYFVLEVVG 151
HD+ WF L + + C C ++ L+ +G
Sbjct: 116 SHDITWFTLRQHQLGRCKECGSFYNLDYLG 145
>gi|50344982|ref|NP_001002163.1| uncharacterized protein LOC415253 [Danio rerio]
gi|48734673|gb|AAH71304.1| Zgc:86599 [Danio rerio]
Length = 126
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 32 ASRSLISRP-LFASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEGKNILEIDYP 90
A+ + SRP L SR +A T ++ ATG E++ + A G + + P
Sbjct: 13 AATTCKSRPVLVVSRGMAAGGIPTDEEQ--------ATGLEKKIMTALKTGSDPYSMLKP 64
Query: 91 TGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
G+K P +V S +KRIVGC E D VVWFWL +G+ CP C ++ L
Sbjct: 65 KSYAGSKSDPHIVPSITNKRIVGCVCEE--DNTAVVWFWLHEGEAQRCPSCGSHYKL 119
>gi|297493726|gb|ADI40585.1| cytochrome c oxidase subunit Vb [Scotophilus kuhlii]
Length = 108
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + + P GTK+ P +V S +KRIVGC ED V+
Sbjct: 38 ATGLEREVMLAARKGLDPYNMLAPKAASGTKEDPNLVPSITNKRIVGCVC--EEDNSAVI 95
Query: 127 WFWLEKGKPHECP 139
WFW+ KG+ CP
Sbjct: 96 WFWVHKGEXQRCP 108
>gi|330928555|ref|XP_003302315.1| hypothetical protein PTT_14072 [Pyrenophora teres f. teres 0-1]
gi|311322435|gb|EFQ89601.1| hypothetical protein PTT_14072 [Pyrenophora teres f. teres 0-1]
Length = 215
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ +++G +I ++ GT + P V + D++ VGC G D H+V
Sbjct: 92 ATGLERLEILGKMQGVDIFDMRPLDASRLGTMEDPITVNAAGDEQYVGCTGFPA-DSHNV 150
Query: 126 VWFWLEKGKPH-ECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
+W L + +P C C + + VGP GHG DHH
Sbjct: 151 LWITLTRDEPKSRCMECGSVYEMHYVGPQEDAHGHGHSDHH 191
>gi|353227584|emb|CCA78087.1| probable COX4-cytochrome-c oxidase chain IV [Piriformospora indica
DSM 11827]
Length = 154
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPF-----GTKDAPAVVKSYYDKRIVGCPGGEGED 121
ATG ER +L ++EG ++ + TGP GT + P +V SY ++RIVGC G E
Sbjct: 61 ATGLERLQLLGQMEGVDV----FNTGPLIMSKAGTLEDPTLVPSYSEERIVGCNGWPSET 116
Query: 122 EHDVVWFWLEKGKPH-ECPVCSQYFVLEVVGPGG 154
HD+VW + + CP C F L+ +G G
Sbjct: 117 -HDMVWLTASNHRENSRCPECGNVFKLQFLGEAG 149
>gi|66826157|ref|XP_646433.1| cytochrome c oxidase subunit V [Dictyostelium discoideum AX4]
gi|231883|sp|P29505.3|COX5_DICDI RecName: Full=Cytochrome c oxidase subunit 5; AltName:
Full=Cytochrome c oxidase polypeptide V
gi|10926|emb|CAA39206.1| cytochrome c oxidase subunit V [Dictyostelium discoideum]
gi|60473972|gb|EAL71909.1| cytochrome c oxidase subunit V [Dictyostelium discoideum AX4]
Length = 120
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 91 TGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
TG FGT +P +V+S + RIV C GG+GE EHD+++ + + KP C C Q F L+ +
Sbjct: 53 TGAFGTLKSPVIVESIFHSRIVACEGGDGE-EHDILFHTVAEKKPTICLDCGQVFKLKHI 111
Query: 151 GPGG 154
G
Sbjct: 112 SSEG 115
>gi|410903878|ref|XP_003965420.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Takifugu rubripes]
Length = 126
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 31 IASRSLISRPLFASRHFSADSAGTSVKKRVEDVNPV----ATGHEREELEAELEGKNILE 86
+A+R L+ A+R A A + P ATG E+ + A EG +
Sbjct: 1 MAARLLLRSAFRAARTCRAAPAPALSRGMAAGGIPTDEEQATGLEKIIMTAMKEGSDPYN 60
Query: 87 IDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFV 146
+ P G+K P +V S +KRIVGC E D VVWFWL +G+ CP C ++
Sbjct: 61 MLKPKEYAGSKTDPHLVPSITNKRIVGCVCEE--DNTAVVWFWLHEGEAQRCPSCGSHYK 118
Query: 147 L 147
L
Sbjct: 119 L 119
>gi|225707510|gb|ACO09601.1| Cytochrome c oxidase subunit 5B, mitochondrial precursor [Osmerus
mordax]
Length = 126
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG E++ + A EG + + P G+K P +V S KRIVGC E D VV
Sbjct: 41 ATGMEKKIMIALKEGADPYSMLKPKEYAGSKSDPHLVPSITTKRIVGCVCEE--DNTAVV 98
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G+ CP C ++ L
Sbjct: 99 WFWLHQGEAQRCPSCGSHYKL 119
>gi|301756414|ref|XP_002914056.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Ailuropoda melanoleuca]
gi|281354626|gb|EFB30210.1| hypothetical protein PANDA_001895 [Ailuropoda melanoleuca]
Length = 129
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 68 TGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVW 127
TG ERE ++A +G++ I P GTK+ P +V S K+IVGC D+ V+
Sbjct: 45 TGLEREVMKAAQKGRDPYNILAPKAAAGTKEDPNLVPSITKKQIVGCIC--KGDDGIVIL 102
Query: 128 FWLEKGKPHECPVCSQYFVL 147
FWL +G+ CP C ++ L
Sbjct: 103 FWLHRGEAQRCPSCGTHYKL 122
>gi|405958424|gb|EKC24554.1| Cytochrome c oxidase subunit 5B, mitochondrial [Crassostrea gigas]
Length = 171
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 59 RVEDVNPVATGHEREELEAELEGKNILEID---YPTGP-FGTKDAPAVVKSYYDKRIVGC 114
+V D A G ER E+ +EGK+ E YP FGTK+ P V S +D+R+VGC
Sbjct: 58 KVPDKGGHAVGLERYEILCRMEGKDPWEDSVSYYPRAKGFGTKENPVPVPSVFDRRLVGC 117
Query: 115 PGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPP 156
ED + +FWL KG+P C C +F L+ + P
Sbjct: 118 IC--DEDTAQMQYFWLYKGEPKRC-FCGHFFQLKEISAADFP 156
>gi|390595456|gb|EIN04861.1| COX5B-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 167
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 67 ATGHEREELEAELEGKNILEID--YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHD 124
ATG ER +L ELEG ++ ++D + GT P V S R++GC G D HD
Sbjct: 70 ATGLERLQLLGELEGVDVFDMDEVLDSSRLGTLADPVKVPSLAPARLIGCTGVPA-DSHD 128
Query: 125 VVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
V+W LE K C C + L+ G P HG+ HH
Sbjct: 129 VIWMNLEHDKVRRCGECGSVYALDY--KGDPEALHGEHAHH 167
>gi|49659864|gb|AAT68231.1| GekBS029P [Gekko japonicus]
gi|50881972|gb|AAT85561.1| BS010P [Gekko japonicus]
Length = 135
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ER+ L+A +G + + GTK+ P +V S +KRIVGC E D V+
Sbjct: 51 ATGLERKVLKALEQGLDPYNMFPIKSRAGTKEDPNLVPSINEKRIVGCICEE--DNSTVI 108
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
FWL KG+ CP C Y+ L
Sbjct: 109 HFWLHKGEAQRCPSCGTYYKL 129
>gi|197725770|gb|ACH73079.1| mitochondrial cytochrome C oxidase subunit Vb precursor
[Epinephelus coioides]
Length = 137
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG E+ ++A EG + + P G+K P +V S +KRIVGC E D VV
Sbjct: 52 ATGLEKVIMKAMKEGSDPYSMMKPKEYAGSKADPHLVPSITNKRIVGCVCEE--DNTAVV 109
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G+ CP C ++ L
Sbjct: 110 WFWLHEGEAQRCPSCGSHYKL 130
>gi|162897|gb|AAA30465.1| cytochrome c oxidase precursor (EC 1.9.3.1), partial [Bos taurus]
Length = 79
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 75 LEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGK 134
+ A +G++ I P GTK+ P +V S +KRIVGC E D V+WFWL KG+
Sbjct: 2 MLAARKGQDPYNILAPKATSGTKEDPNLVPSITNKRIVGCICEE--DNSTVIWFWLHKGE 59
Query: 135 PHECPVCSQYFVL 147
CP C ++ L
Sbjct: 60 AQRCPSCGTHYKL 72
>gi|156089621|ref|XP_001612217.1| cytochrome c oxidase subunit Vb [Babesia bovis T2Bo]
gi|154799471|gb|EDO08649.1| cytochrome c oxidase subunit Vb, putative [Babesia bovis]
Length = 275
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%)
Query: 91 TGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
GPFGT P +V S +RIVGC GG GE EH +WF +G + C C Q F+L
Sbjct: 128 VGPFGTIKNPVLVPSILTERIVGCTGGAGEHEHLPLWFRCREGFLYRCGECDQIFML 184
>gi|116191289|ref|XP_001221457.1| hypothetical protein CHGG_05362 [Chaetomium globosum CBS 148.51]
gi|88181275|gb|EAQ88743.1| hypothetical protein CHGG_05362 [Chaetomium globosum CBS 148.51]
Length = 184
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ ++EG +I ++ GT P +V+S +++ GC G D H+V
Sbjct: 70 ATGLERLEILGKMEGVDIFDMRPLDASRLGTLQNPVMVRSAGEEQYAGCTGVPA-DSHNV 128
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
+W + + +P E CP C + +E VGP +DDHH
Sbjct: 129 IWLTMTRERPVERCPECGSVYKMEYVGP--------EDDHH 161
>gi|452983843|gb|EME83601.1| hypothetical protein MYCFIDRAFT_89362 [Pseudocercospora fijiensis
CIRAD86]
Length = 194
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ +++G +I ++ GT + P VVKSY D++ VGC G D H V
Sbjct: 73 ATGIERLEILGKMQGIDIFDMRPLDASRKGTLEDPIVVKSYGDEQYVGCTGCPA-DSHVV 131
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGP 152
+W + + + E CP C + +E VGP
Sbjct: 132 IWLTISRARDIERCPECGSVYKMEYVGP 159
>gi|67083995|gb|AAY66932.1| cytochrome c oxidase polypeptide Vb [Ixodes scapularis]
Length = 122
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 18/123 (14%)
Query: 30 SIASRSLIS--RP--LFASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEGKNI- 84
S+ RS+ RP L +R F ++ +KR+ D ATG E++EL A G +
Sbjct: 3 SVLGRSIAKNVRPALLLTARRFKSE------EKRIYDAMEYATGIEKKELLARAAGNDDP 56
Query: 85 --LEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCS 142
+ + + GP GTKD P ++ S+ +KR++GC ED + W WL +G P C C
Sbjct: 57 FDMRV-FKRGP-GTKDNPNLIPSHLEKRMIGCIC--EEDATTINWMWLHRGDPKRCE-CG 111
Query: 143 QYF 145
+F
Sbjct: 112 HWF 114
>gi|241632447|ref|XP_002408597.1| cytochrome C oxidase polypeptide Vb [Ixodes scapularis]
gi|215501199|gb|EEC10693.1| cytochrome C oxidase polypeptide Vb [Ixodes scapularis]
Length = 124
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 18/123 (14%)
Query: 30 SIASRSLIS--RP--LFASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEGKNI- 84
S+ RS+ RP L +R F ++ +KR+ D ATG E++EL A G +
Sbjct: 5 SVLGRSIAKNVRPALLLTARRFKSE------EKRIYDAMEYATGIEKKELLARAAGNDDP 58
Query: 85 --LEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCS 142
+ + + GP GTKD P ++ S+ +KR++GC ED + W WL +G P C C
Sbjct: 59 FDMRV-FKRGP-GTKDNPNLIPSHLEKRMIGCIC--EEDATTINWMWLHRGDPKRCE-CG 113
Query: 143 QYF 145
+F
Sbjct: 114 HWF 116
>gi|84995874|ref|XP_952659.1| cytochrome c oxidase subunit [Theileria annulata strain Ankara]
gi|65302820|emb|CAI74927.1| cytochrome c oxidase subunit, putative [Theileria annulata]
Length = 270
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%)
Query: 91 TGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
GPFGT P +V S +R+VGC GG GE EH +WF +G + C C Q F+L
Sbjct: 124 VGPFGTIQNPVLVPSVMTERVVGCTGGSGEHEHVPLWFRCREGFLYRCGECDQIFML 180
>gi|66534766|ref|XP_624987.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial [Apis
mellifera]
Length = 122
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 15/125 (12%)
Query: 36 LISRPLF--ASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEGK------NILEI 87
L SR +F R FS ++ S K+ D +ATG E+ EL A G +EI
Sbjct: 4 LCSRIVFHKCRRTFSCNAVKFSKKETFPDPLELATGLEKRELLAAAAGNFDPYHMKAIEI 63
Query: 88 DYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
+ TKD P +V S + RIVGC D V W WL G+P C C +F L
Sbjct: 64 SRDS----TKDCPNLVPSAFKSRIVGCIC--EPDTSHVNWMWLHDGQPRRCE-CGHWFKL 116
Query: 148 EVVGP 152
V P
Sbjct: 117 TQVAP 121
>gi|209731054|gb|ACI66396.1| Cytochrome c oxidase subunit 5B, mitochondrial precursor [Salmo
salar]
gi|223646170|gb|ACN09843.1| Cytochrome c oxidase subunit 5B, mitochondrial precursor [Salmo
salar]
gi|223672017|gb|ACN12190.1| Cytochrome c oxidase subunit 5B, mitochondrial precursor [Salmo
salar]
Length = 126
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG E+ ++A +G + + P G+K P +V S KRIVGC E D VV
Sbjct: 41 ATGLEKIVMKAAQQGADPYSMLKPKEYAGSKADPHLVPSITTKRIVGCVCEE--DNTAVV 98
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G+ CP C ++ L
Sbjct: 99 WFWLHQGEAQRCPSCGSHYKL 119
>gi|443900103|dbj|GAC77430.1| cytochrome c oxidase, subunit Vb/COX4, partial [Pseudozyma
antarctica T-34]
Length = 136
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL +L+G+ + +++ GT + P +KSY+ RIVGC G D HD
Sbjct: 44 ATGLERFELLGKLQGQEVFDMEPLQMTHLGTTENPIQIKSYWPTRIVGCTGYPA-DSHDT 102
Query: 126 VWFWLEKG-KPHECPVCSQYFVLEVVG 151
++ L + K H CP C + ++ G
Sbjct: 103 IYLHLNRDLKHHRCPECGSVYQMDFEG 129
>gi|322700565|gb|EFY92319.1| hypothetical protein MAC_01590 [Metarhizium acridum CQMa 102]
Length = 202
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ ++EG +I ++ GT + P +V+S D++ GC G D H V
Sbjct: 87 ATGLERLEILGKMEGVDIFDMRPLDASRKGTMENPIMVRSAGDEQYAGCTGSPA-DSHVV 145
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
W L K +P E CP C + ++ VGP +DDHH
Sbjct: 146 TWLGLSKERPIERCPECGSVYKMDYVGP--------EDDHH 178
>gi|321463349|gb|EFX74365.1| hypothetical protein DAPPUDRAFT_231281 [Daphnia pulex]
Length = 120
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 35 SLISRPLFASRHFSADSAGTSVKKRVEDVNPV--ATGHEREELEAELEGK-NILEIDYPT 91
SL+ R +FA+ + R + +PV ATG E+ E+ A+ G+ + E+
Sbjct: 3 SLVCRSVFAATRRGVSTTAVRAADRAMN-DPVEHATGLEKREILAKQAGREDPYEMQVYK 61
Query: 92 GPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
GTK+ P VV S D R+VGC ED + W WL KG+P C C +F L
Sbjct: 62 RVAGTKEKPNVVPSVADYRVVGCVC--EEDATAINWMWLYKGEPKRCE-CGYWFKL 114
>gi|71029944|ref|XP_764614.1| cytochrome c oxidase subunit [Theileria parva strain Muguga]
gi|68351570|gb|EAN32331.1| cytochrome c oxidase subunit, putative [Theileria parva]
Length = 270
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%)
Query: 91 TGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
GPFGT P +V S +R+VGC GG GE EH +WF +G + C C Q F+L
Sbjct: 124 VGPFGTIQNPVLVPSVMTERVVGCTGGSGEHEHVPLWFRCREGFLYRCGECDQIFML 180
>gi|225716308|gb|ACO14000.1| Cytochrome c oxidase subunit 5B, mitochondrial precursor [Esox
lucius]
Length = 126
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG E+ L A +G + + P G+K P +V S KRIVGC E D VV
Sbjct: 41 ATGLEKIVLNAAKKGADPYSMLKPKEYAGSKADPHLVPSITTKRIVGCVCEE--DNTAVV 98
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G+ CP C ++ L
Sbjct: 99 WFWLHQGEAQRCPSCGSHYKL 119
>gi|432953437|ref|XP_004085394.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Oryzias latipes]
Length = 120
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG E+ ++A +G + + P G+K P +V S +KRIVGC E D VV
Sbjct: 35 ATGLEKIIMKAMKDGTDPYNMLKPKSFAGSKADPHLVPSITNKRIVGCVCEE--DNTAVV 92
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G+ CP C ++ L
Sbjct: 93 WFWLHEGEAQRCPSCGSHYKL 113
>gi|429327174|gb|AFZ78934.1| cytochrome C oxidase, putative [Babesia equi]
Length = 311
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%)
Query: 91 TGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
GPFGT P +V S +RIVGC GG G+ EH +WF +G + C C Q F+L
Sbjct: 165 VGPFGTVKNPVLVPSVLTERIVGCTGGAGDHEHVPLWFRCREGFLYRCGECDQIFML 221
>gi|315044333|ref|XP_003171542.1| cytochrome c oxidase polypeptide IV [Arthroderma gypseum CBS
118893]
gi|311343885|gb|EFR03088.1| cytochrome c oxidase polypeptide IV [Arthroderma gypseum CBS
118893]
Length = 194
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER EL +++G +I + GT + P VV+S ++ VGC G D H V
Sbjct: 77 STGLERLELLGKMQGIDIFDQKPLDASRLGTINDPIVVQSAGEEHYVGCTGYPA-DSHTV 135
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPPDGHGDDDH 164
+W + K +P E C C ++ VGP P HG D H
Sbjct: 136 IWLTVSKDRPIERCSECGNTIKMDYVGPKEDPHAHGHDHH 175
>gi|326476184|gb|EGE00194.1| cytochrome c subunit Vb [Trichophyton tonsurans CBS 112818]
Length = 194
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER EL +++G +I + GT P +VKS ++ VGC G D H V
Sbjct: 77 STGLERLELLGKMQGIDIFDQKPLDASRLGTIQDPIIVKSAGEEHYVGCTGYPA-DSHTV 135
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPPDGHGDDDH 164
+W + K +P E C C ++ VGP P HG D H
Sbjct: 136 IWLTVSKDRPIERCSECGNTIKMDYVGPKEDPHAHGHDHH 175
>gi|209736904|gb|ACI69321.1| Cytochrome c oxidase subunit 5B, mitochondrial precursor [Salmo
salar]
gi|223646124|gb|ACN09820.1| Cytochrome c oxidase subunit 5B, mitochondrial precursor [Salmo
salar]
gi|223671971|gb|ACN12167.1| Cytochrome c oxidase subunit 5B, mitochondrial precursor [Salmo
salar]
Length = 126
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG E+ ++A +G + + P G+K P +V S KRIVGC E D VV
Sbjct: 41 ATGLEKIVMKAAQQGADPYSMLKPKEYAGSKADPHLVPSITTKRIVGCVCEE--DNTAVV 98
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G CP C ++ L
Sbjct: 99 WFWLHQGDAQRCPSCGSHYKL 119
>gi|430814468|emb|CCJ28297.1| unnamed protein product [Pneumocystis jirovecii]
Length = 162
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
Query: 42 FASRHFSADSAGTS--VKKRVEDVNPVATGHEREELEAELEGKNILEID-YPTGPFGTKD 98
F S+ ++ S V+ R+ + ATG E+ EL ++ G+ +++ GT
Sbjct: 42 FISKSYTKKDTLPSKPVEGRIPTILEQATGIEKFELLKKIAGEEAFDLEPLDASRMGTLK 101
Query: 99 APAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPH-ECPVCSQYFVLEVVGPGGPPD 157
P +VKS R++GC G D H+V+WF L K + + CP C + L+ +G +
Sbjct: 102 DPIIVKSLEKTRLIGCTGFPA-DSHNVLWFELSKDRQNSRCPECGNVYKLDFIGVENTSN 160
Query: 158 GH 159
H
Sbjct: 161 HH 162
>gi|239609607|gb|EEQ86594.1| cytochrome c subunit Vb [Ajellomyces dermatitidis ER-3]
gi|327350154|gb|EGE79011.1| cytochrome c subunit Vb [Ajellomyces dermatitidis ATCC 18188]
Length = 198
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL ++ G ++ ++ GT + P +VKS D++ GC G D HDV
Sbjct: 81 ATGLERIELLGKMHGIDVFDMRPLDASRMGTFENPIIVKSGGDEQYAGCTGYPA-DSHDV 139
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
VW + + +P E C C ++ VGP P H D+HH
Sbjct: 140 VWLTVSRERPIERCSECGNVVKMDYVGPEDDP--HAHDEHH 178
>gi|261196756|ref|XP_002624781.1| cytochrome c subunit Vb [Ajellomyces dermatitidis SLH14081]
gi|239596026|gb|EEQ78607.1| cytochrome c subunit Vb [Ajellomyces dermatitidis SLH14081]
Length = 198
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL ++ G ++ ++ GT + P +VKS D++ GC G D HDV
Sbjct: 81 ATGLERIELLGKMHGIDVFDMRPLDASRMGTFENPIIVKSGGDEQYAGCTGYPA-DSHDV 139
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
VW + + +P E C C ++ VGP P H D+HH
Sbjct: 140 VWLTVSRERPIERCSECGNVVKMDYVGPEDDP--HAHDEHH 178
>gi|223647016|gb|ACN10266.1| Cytochrome c oxidase subunit 5B, mitochondrial precursor [Salmo
salar]
gi|223672881|gb|ACN12622.1| Cytochrome c oxidase subunit 5B, mitochondrial precursor [Salmo
salar]
Length = 159
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG E+ ++A +G + + P G+K P +V S KRIVGC E D VV
Sbjct: 74 ATGLEKIVMKAAQQGADPYSMLKPKEYAGSKADPHLVPSITTKRIVGCVCEE--DNTAVV 131
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFWL +G CP C ++ L
Sbjct: 132 WFWLHQGDAQRCPSCGSHYKL 152
>gi|343426226|emb|CBQ69757.1| probable COX4-cytochrome-c oxidase chain IV [Sporisorium reilianum
SRZ2]
Length = 153
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
Query: 15 LALAQYSCRSAPVNPSIASRSLISRPL-FASRHFSADSAGTSVKKRVEDVNPVATGHERE 73
+A A + R AP + ASR S L FA+ G + D ATG ER
Sbjct: 9 VARAPAALRVAPTPVNSASRLFTSSALRFAAGPPVIQGEGAKDGEMPTDEQQ-ATGLERF 67
Query: 74 ELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEK 132
EL +L+G + +++ GT + P VKSY+ RIVGC G D HD ++ L
Sbjct: 68 ELLGKLQGVEVFDMEPLQMTHLGTTEKPIKVKSYWPTRIVGCTGYPA-DSHDTIYLHLNN 126
Query: 133 G-KPHECPVCSQYFVLEVVG 151
K H CP C + ++ G
Sbjct: 127 QLKHHRCPECGSVYEMDFEG 146
>gi|149287028|gb|ABR23413.1| cytochrome c oxidase polyprotein Vb [Ornithodoros parkeri]
Length = 122
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 60/122 (49%), Gaps = 12/122 (9%)
Query: 30 SIASRSLISRPLFASRHFSADSAG-TSVKKRVEDVNPVATGHEREELEAELEGKNILEID 88
S+ RSL+ A R ++ S +KR+ D A G E+ EL+A G N D
Sbjct: 3 SLVGRSLVKN---ARRALIINARRYKSEEKRIFDAREYACGKEKLELDAIAAG-NEDPFD 58
Query: 89 ---YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYF 145
+ GP GTKD P ++ SY +KR++GC ED + W WL +G P C C +F
Sbjct: 59 MRVFKRGP-GTKDNPNLIPSYLEKRMIGCIC--EEDATVINWMWLHRGDPRRCE-CGHWF 114
Query: 146 VL 147
L
Sbjct: 115 KL 116
>gi|340520094|gb|EGR50331.1| predicted protein [Trichoderma reesei QM6a]
Length = 149
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ ++EG ++ ++ + GT D P +V+S D+++ GC G D H V
Sbjct: 34 ATGLERLEILGKMEGVDVFDMRPLDSSRKGTLDDPILVRSAGDEQLAGCTGYPA-DSHGV 92
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGP 152
+W L K +P E CP C + ++ VGP
Sbjct: 93 IWLGLSKERPVERCPECGSVYKMDYVGP 120
>gi|403221627|dbj|BAM39759.1| cytochrome Coxidase subunit [Theileria orientalis strain Shintoku]
Length = 225
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%)
Query: 91 TGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
GPFGT P +V S +R+VGC GG GE EH +WF +G + C C Q F+L
Sbjct: 79 VGPFGTIKNPVLVPSVMTERVVGCTGGSGEHEHVPLWFRCREGFLYRCGECDQIFML 135
>gi|449665816|ref|XP_002163171.2| PREDICTED: uncharacterized protein LOC100211146 [Hydra
magnipapillata]
Length = 320
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 66 VATGHEREELEAELEGK----NILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGED 121
+ATG ER+E+EA L G N+ I+ GP GT++AP +V S D+RI+GC E+
Sbjct: 230 IATGTERKEIEAILAGNPDPFNMHTIN--KGPPGTREAPTLVPSMCDERIIGCIC--DEE 285
Query: 122 EHDVVWFWLEKGKPHECPVCSQYFVL 147
V W L+KG C C ++F L
Sbjct: 286 STSVSWMVLKKGPVQRCH-CGKFFQL 310
>gi|149689144|gb|ABR27922.1| putative mitochondrial cytochrome oxidase polypeptide Vb [Triatoma
infestans]
Length = 118
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 46 HFSADSAGTSVKKRVEDVNPV--ATGHEREELEAELEG-KNILEIDYPTGPFGTKDAPAV 102
S + +S K +PV ATG E+ EL A + G +N ++ GTKD P
Sbjct: 11 QVSKRNVFSSATKLANMPDPVEHATGLEKRELLAIVSGIENPFDMKVLKRGPGTKDCPNQ 70
Query: 103 VKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGP 152
V S +D R++GC ED ++ W WL +GKP C C +F L P
Sbjct: 71 VPSCFDARLLGCVC--NEDATNIQWMWLHQGKPKRCH-CGHWFQLVYKAP 117
>gi|156097564|ref|XP_001614815.1| cytochrome c oxidase subunit [Plasmodium vivax Sal-1]
gi|148803689|gb|EDL45088.1| cytochrome c oxidase subunit, putative [Plasmodium vivax]
Length = 280
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%)
Query: 55 SVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGC 114
S K+ D+ + E + A LE L+ GPFGT + P +V S + +R+V C
Sbjct: 113 SYKQLAVDMGMQIANPDNEHMLALLEFYEYLKSSPFVGPFGTIENPVIVPSVHTERVVCC 172
Query: 115 PGGEGEDEHDVVWFWLEKGKPHECPVCSQYFV 146
GG GE+EH ++F +G + C C Q F+
Sbjct: 173 TGGTGENEHVPLFFRCREGFLYRCGECDQMFM 204
>gi|302685301|ref|XP_003032331.1| hypothetical protein SCHCODRAFT_68145 [Schizophyllum commune H4-8]
gi|300106024|gb|EFI97428.1| hypothetical protein SCHCODRAFT_68145 [Schizophyllum commune H4-8]
Length = 161
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 67 ATGHEREELEAELEGKNILEIDYP--TGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHD 124
ATG ER EL +L+G + + D P + GTK P V S+ R++GC G D H
Sbjct: 55 ATGLERLELLGDLQGIKVFD-DSPLDSSRIGTKKDPIRVPSFDHDRVIGCTGSPA-DSHH 112
Query: 125 VVWFWLEKGKPHECPVCSQYFVLEVV 150
V+WF + +GK C C + L+++
Sbjct: 113 VLWFHVREGKQTRCTECGSVYELDLI 138
>gi|221054830|ref|XP_002258554.1| PK9_2640w Cytochrome c oxidase subunit [Plasmodium knowlesi strain
H]
gi|193808623|emb|CAQ39326.1| PK9_2640w Cytochrome c oxidase subunit,putative [Plasmodium
knowlesi strain H]
Length = 278
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%)
Query: 55 SVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGC 114
S K+ D+ + E + A LE L+ GPFGT + P +V S + +R+V C
Sbjct: 111 SYKQLAVDMGMQIANPDNEHMLALLEFYEYLKSSPFVGPFGTIENPVIVPSVHTERVVCC 170
Query: 115 PGGEGEDEHDVVWFWLEKGKPHECPVCSQYFV 146
GG GE+EH ++F +G + C C Q F+
Sbjct: 171 TGGTGENEHVPLFFRCREGFLYRCGECDQIFM 202
>gi|444730659|gb|ELW71033.1| Cytochrome c oxidase subunit 5B, mitochondrial [Tupaia chinensis]
Length = 99
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + +G + + GTK+ P +V S +KR+VGC E D V+
Sbjct: 14 ATGLEREVMMTARKGLDPYNLLPARAASGTKEDPNLVPSITNKRLVGCICEE--DNSAVI 71
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
W WL KG+ CP C ++ L
Sbjct: 72 WSWLHKGETQRCPNCGTHYKL 92
>gi|332373650|gb|AEE61966.1| unknown [Dendroctonus ponderosae]
Length = 121
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 43 ASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEGK-NILEIDYPTGPFGTKDAPA 101
A RH + S S K + D ATG E+ E+ A+L G N ++ G+K P
Sbjct: 13 ARRHIFSSSIRCSSKVTLGDPVEHATGLEKREILAKLAGNDNPFDMRVIKRGVGSKAQPT 72
Query: 102 VVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
+ S +D R+VGC E+ + W WL KG+P C C +F L
Sbjct: 73 PIPSAFDSRLVGCVC--EEEATTINWMWLHKGEPRRCE-CGHWFNL 115
>gi|332233341|ref|XP_003265860.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Nomascus leucogenys]
Length = 130
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 68 TGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVW 127
TG E E + +G ++ I P GTK+ P +V S +K IVGC ED V+W
Sbjct: 45 TGLEMEVMMVAGKGLDLYSILPPKAVSGTKEDPNLVSSIANKSIVGCIC--EEDSSAVIW 102
Query: 128 FWLEKGKP-HECPVCSQYFVL 147
FWL KG+ +CP C ++ L
Sbjct: 103 FWLHKGETQQQCPSCGTHYKL 123
>gi|58261242|ref|XP_568031.1| cytochrome c oxidase polypeptide IV mitochondrial precursor
[Cryptococcus neoformans var. neoformans JEC21]
gi|57230113|gb|AAW46514.1| cytochrome c oxidase polypeptide iv, mitochondrial precursor,
putative [Cryptococcus neoformans var. neoformans JEC21]
Length = 212
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 67/159 (42%), Gaps = 19/159 (11%)
Query: 7 SSQLKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVKKRVEDVNPV 66
S +A +A A S R+A A R + P F +R FS +A ++ + + P
Sbjct: 47 SPLFQAPKMASAIRSLRTA----LPALRRTVPAPAFTARAFSISAARSAGHGPPQLLGPG 102
Query: 67 A------------TGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVG 113
A TG ER EL LEG ++ ++ GT D P + S + +R +G
Sbjct: 103 AKAGEVPNDENQSTGLERFELLGNLEGVDVFDMKPLEITRLGTVDEPIPIYSLFPERQIG 162
Query: 114 CPGGEGEDEHDVVWFWLEKG-KPHECPVCSQYFVLEVVG 151
C G D HD +W + K H CP C + L G
Sbjct: 163 CTGFP-VDSHDTIWLNVNHTLKNHRCPECGSVYTLNFQG 200
>gi|154310538|ref|XP_001554600.1| subunit IV of cytochrome c oxidase [Botryotinia fuckeliana B05.10]
gi|347839500|emb|CCD54072.1| similar to cytochrome c oxidase polypeptide IV [Botryotinia
fuckeliana]
Length = 193
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ +++G +I ++ GT D P +VKS+ D++ GC G D H
Sbjct: 73 ATGLERLEILGKMQGVDIFDMKPLDASRKGTLDNPIIVKSFGDEQYAGC-TGYPVDSHVT 131
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGP 152
+W + + +P E CP C +E VGP
Sbjct: 132 IWLTMSRDRPVERCPECGNVLKMEYVGP 159
>gi|389583116|dbj|GAB65852.1| cytochrome c oxidase subunit [Plasmodium cynomolgi strain B]
Length = 278
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%)
Query: 55 SVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGC 114
S K+ D+ + E + A LE L+ GPFGT + P +V S + +R+V C
Sbjct: 112 SYKQLAVDMGMQIANPDNEHMLALLEFYEYLKSSPFVGPFGTIENPVIVPSVHTERVVCC 171
Query: 115 PGGEGEDEHDVVWFWLEKGKPHECPVCSQYFV 146
GG GE+EH ++F +G + C C Q F+
Sbjct: 172 TGGTGENEHVPLFFRCREGFLYRCGECDQIFM 203
>gi|58386537|ref|XP_314835.2| AGAP008724-PA [Anopheles gambiae str. PEST]
gi|55239920|gb|EAA10211.2| AGAP008724-PA [Anopheles gambiae str. PEST]
Length = 119
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 35 SLISRPLFASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEGKNILEID---YPT 91
SL R + A+ + K + D ATG E+ EL A+ G N D +
Sbjct: 3 SLCGRIVLAAAKRNVTYTPVRFCKMMNDPIEHATGIEKRELLAKQAG-NPDPFDMRVFKR 61
Query: 92 GPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
GP GTKD+P ++ S +D R+VGC ED+ V W WL +G+P C C +F L
Sbjct: 62 GP-GTKDSPNLIPSAFDARLVGCVC--EEDQTYVQWMWLHQGQPKRCE-CGHWFKL 113
>gi|134115733|ref|XP_773580.1| hypothetical protein CNBI1940 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256206|gb|EAL18933.1| hypothetical protein CNBI1940 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 212
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 67/159 (42%), Gaps = 19/159 (11%)
Query: 7 SSQLKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVKKRVEDVNPV 66
S +A +A A S R+A A R + P F +R FS +A ++ + + P
Sbjct: 47 SPLFQAPKMASAIRSLRTA----LPALRRTVPAPAFTARAFSISAARSAGHGPPQLLGPG 102
Query: 67 A------------TGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVG 113
A TG ER EL LEG ++ ++ GT D P + S + +R +G
Sbjct: 103 AKAGEVPNDENQSTGLERFELLGNLEGVDVFDMKPLEITRLGTVDEPIPIYSLFPERQIG 162
Query: 114 CPGGEGEDEHDVVWFWLEKG-KPHECPVCSQYFVLEVVG 151
C G D HD +W + K H CP C + L G
Sbjct: 163 CTGFP-VDSHDTIWLNVNHTLKNHRCPECGSVYTLNFQG 200
>gi|71021437|ref|XP_760949.1| hypothetical protein UM04802.1 [Ustilago maydis 521]
gi|46101024|gb|EAK86257.1| hypothetical protein UM04802.1 [Ustilago maydis 521]
Length = 153
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 15 LALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVKKRVEDVNPV----ATGH 70
+A A + R AP + ASR S L F+A + E P ATG
Sbjct: 9 VARAPAALRVAPTPVTSASRLFTSSAL----RFAAGPPVIQGEGAKEGEIPTDEQQATGL 64
Query: 71 EREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFW 129
ER EL +L+G ++ +++ GT + P VKS++ RIVGC G D HD ++
Sbjct: 65 ERFELLGKLQGVDVFDMEPLQMTHLGTTEKPIKVKSFWPSRIVGCTGYPA-DSHDTIYLH 123
Query: 130 LEKG-KPHECPVCSQYFVLEVVG 151
L K H CP C + ++ G
Sbjct: 124 LNNQLKHHRCPECGSVYEMDFEG 146
>gi|294874382|ref|XP_002766928.1| cytochrome Coxidase subunit, putative [Perkinsus marinus ATCC
50983]
gi|239868303|gb|EEQ99645.1| cytochrome Coxidase subunit, putative [Perkinsus marinus ATCC
50983]
Length = 258
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 91 TGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
GPFGT + P +V + +R+V C GG G++EH +WF +G + C C Q F+L
Sbjct: 129 VGPFGTIENPVLVPAVGQERVVACTGGVGDEEHFTLWFRCREGFMYRCGECDQIFML 185
>gi|294933171|ref|XP_002780633.1| cytochrome Coxidase subunit, putative [Perkinsus marinus ATCC
50983]
gi|239890567|gb|EER12428.1| cytochrome Coxidase subunit, putative [Perkinsus marinus ATCC
50983]
Length = 258
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 91 TGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
GPFGT + P +V + +R+V C GG G++EH +WF +G + C C Q F+L
Sbjct: 129 VGPFGTIENPVLVPAVGQERVVACTGGVGDEEHFTLWFRCREGFMYRCGECDQIFML 185
>gi|297493730|gb|ADI40587.1| cytochrome c oxidase subunit Vb [Miniopterus schreibersii]
Length = 106
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + + P GTK+ P +V S +KRIVGC ED V+
Sbjct: 38 ATGLEREVMMAARKGLDPYNMLAPKAASGTKEDPNLVPSITNKRIVGCIC--EEDNSAVI 95
Query: 127 WFWLEKGKPH 136
WFWL KG+
Sbjct: 96 WFWLHKGETQ 105
>gi|294881763|ref|XP_002769485.1| cytochrome Coxidase subunit, putative [Perkinsus marinus ATCC
50983]
gi|239872944|gb|EER02203.1| cytochrome Coxidase subunit, putative [Perkinsus marinus ATCC
50983]
Length = 258
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 91 TGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
GPFGT + P +V + +R+V C GG G++EH +WF +G + C C Q F+L
Sbjct: 129 VGPFGTIENPVLVPAVGQERVVACTGGVGDEEHFTLWFRCREGFMYRCGECDQIFML 185
>gi|367051376|ref|XP_003656067.1| hypothetical protein THITE_2120446 [Thielavia terrestris NRRL 8126]
gi|347003331|gb|AEO69731.1| hypothetical protein THITE_2120446 [Thielavia terrestris NRRL 8126]
Length = 152
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ ++EG ++ ++ GT D P +V+S +++ GC G D H+V
Sbjct: 38 ATGLERLEILGKMEGIDVFDMRPLDASRKGTLDNPVMVRSAGEEQYAGCTGVPA-DSHNV 96
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGP 152
VW +++ +P E CP C + +E VGP
Sbjct: 97 VWLRMDRQRPVERCPECGSVYKMEYVGP 124
>gi|70943284|ref|XP_741707.1| cytochrome c oxidase subunit [Plasmodium chabaudi chabaudi]
gi|56520256|emb|CAH84072.1| cytochrome c oxidase subunit, putative [Plasmodium chabaudi
chabaudi]
Length = 269
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%)
Query: 55 SVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGC 114
S K+ D+ + E + A LE L+ GPFGT + P +V S + +R+V C
Sbjct: 107 SYKQLAIDLGMQIANPDNEHMLALLEFYEYLKSSPFVGPFGTIENPVIVPSVHTERVVCC 166
Query: 115 PGGEGEDEHDVVWFWLEKGKPHECPVCSQYFV 146
GG GE+EH ++F +G + C C Q F+
Sbjct: 167 TGGTGENEHVPLFFRCREGFLYRCGECDQIFM 198
>gi|50412797|ref|XP_457165.1| DEHA2B04664p [Debaryomyces hansenii CBS767]
gi|49652830|emb|CAG85159.1| DEHA2B04664p [Debaryomyces hansenii CBS767]
Length = 155
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 67 ATGHEREELEAELEGKNILEIDYPT--GPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHD 124
ATG ER EL ++EG ++ +++ P G KD P +V +Y R VGC G +G D+H
Sbjct: 64 ATGLERFELLGKMEGIDVFDMENPIFEGSGSMKD-PYLVPTYMGYRYVGCMG-KGGDDHK 121
Query: 125 VVWFWLEKGKPHECPVCSQYFVLEVVG 151
W +E+GKP C C + + +G
Sbjct: 122 PYWMKVEEGKPGRCWQCGNVYSAKYLG 148
>gi|68075443|ref|XP_679640.1| cytochrome c oxidase subunit [Plasmodium berghei strain ANKA]
gi|56500434|emb|CAI04795.1| cytochrome c oxidase subunit, putative [Plasmodium berghei]
Length = 274
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%)
Query: 55 SVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGC 114
S K+ D+ + E + A LE L+ GPFGT + P +V S + +R+V C
Sbjct: 104 SYKQLAIDLGMQIANPDNEHMLALLEFYEYLKSSPFVGPFGTIENPVIVPSVHTERVVCC 163
Query: 115 PGGEGEDEHDVVWFWLEKGKPHECPVCSQYFV 146
GG GE+EH ++F +G + C C Q F+
Sbjct: 164 TGGTGENEHVPLFFRCREGFLYRCGECDQIFM 195
>gi|427798723|gb|JAA64813.1| Putative cytochrome c oxidase polypeptide vb, partial
[Rhipicephalus pulchellus]
Length = 155
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 39/155 (25%)
Query: 16 ALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVKKRV------EDVNPV--- 66
A+A+ SC S PV SI P++ R FS+D T++ + V D+
Sbjct: 10 AIARSSCLSRPVAYSI--------PVY-KRGFSSDLNRTALMQTVCRALRRSDLPTTTAA 60
Query: 67 -------------ATGHEREELEAELEGKNI---LEIDYPTGPFGTKDAPAVVKSYYDKR 110
ATG ER+EL A G + +++ + GP GTKD P ++ S+ +KR
Sbjct: 61 AILAFVKFTGMEYATGRERQELLAMAAGNDDPFDMKV-FKRGP-GTKDNPNLIPSHLEKR 118
Query: 111 IVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYF 145
++GC ED+ + W WL +G P C C +F
Sbjct: 119 MIGCIC--EEDQTHINWMWLHRGDPKRCE-CGYWF 150
>gi|358397286|gb|EHK46661.1| hypothetical protein TRIATDRAFT_299210 [Trichoderma atroviride IMI
206040]
Length = 204
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ ++EG ++ ++ GT + P +V+S D+++ GC G D H V
Sbjct: 85 ATGLERLEILGKMEGVDVFDMRPLDASRKGTMENPILVRSAGDEQLAGCTGYP-VDSHTV 143
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGP 152
+W L K +P E CP C + +E +GP
Sbjct: 144 IWLGLSKERPVERCPECGGVYKMEYIGP 171
>gi|399218718|emb|CCF75605.1| unnamed protein product [Babesia microti strain RI]
Length = 282
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%)
Query: 91 TGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
GPFGT P +V S +R+VGC GG G+ EH +WF +G + C C Q F+L
Sbjct: 133 VGPFGTIKNPVLVPSMNVERVVGCTGGSGDREHVPLWFRCREGFLYRCGECDQIFML 189
>gi|327297074|ref|XP_003233231.1| cytochrome c subunit Vb [Trichophyton rubrum CBS 118892]
gi|326464537|gb|EGD89990.1| cytochrome c subunit Vb [Trichophyton rubrum CBS 118892]
Length = 194
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER EL +++G +I + GT P VVKS ++ VGC G D H V
Sbjct: 77 STGLERLELLGKMQGIDIFDQKPLDASRLGTIQDPIVVKSAGEEHYVGCTGYPA-DSHTV 135
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPPDGHGDDDH 164
+W + K +P E C C ++ VGP P H D H
Sbjct: 136 IWLTVSKDRPVERCSECGNTIKMDYVGPKEDPHAHSHDHH 175
>gi|340727883|ref|XP_003402264.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Bombus terrestris]
Length = 125
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 60/129 (46%), Gaps = 17/129 (13%)
Query: 36 LISRPLFAS--RHFSADSAGTSVKKRVEDVNPV--ATGHEREELEAELEG------KNIL 85
L SR +F + R F D+ + +K +P+ ATG E+ E+ A G +
Sbjct: 4 LCSRTIFQTCRRQFYRDAVRYTKEKEKTFPDPLELATGLEKREMLAAAAGDFDPYHMKAI 63
Query: 86 EIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYF 145
EI + TKD P +V S + R+VGC E D V W WL +G+P C C +F
Sbjct: 64 EISRDS----TKDNPNLVPSAFKSRVVGCLCEE--DTAHVNWMWLHEGQPRRCE-CGHWF 116
Query: 146 VLEVVGPGG 154
L V P G
Sbjct: 117 KLTEVAPLG 125
>gi|440635331|gb|ELR05250.1| hypothetical protein GMDG_01688 [Geomyces destructans 20631-21]
Length = 195
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ ++EG +I ++ + GT P +VKS+ +++ VGC G D H
Sbjct: 70 ATGLERVEILGKMEGIDIFDMRPLDSSRTGTIADPIMVKSFGEEQYVGCTGSPA-DSHVT 128
Query: 126 VWFWLEKGKP-HECPVCSQYFVLEVVGP 152
+W + + +P CP C + +E VGP
Sbjct: 129 IWLTMSRERPVGRCPECGSVYKMEYVGP 156
>gi|387015412|gb|AFJ49825.1| Cytochrome c oxidase subunit Vb, gene 1 [Crotalus adamanteus]
Length = 125
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFG-TKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER+ ++ +G++ + YP+ P+G TKD P +V S + R+VGC E D +
Sbjct: 41 ATGMERKIMDTIKKGEDPYGV-YPSKPYGGTKDDPHLVPSLTNVRLVGCICEE--DATET 97
Query: 126 VWFWLEKGKPHECPVCSQYFVL 147
+FWL K K CP C +F L
Sbjct: 98 YYFWLHKDKMERCPSCGAHFKL 119
>gi|156373694|ref|XP_001629446.1| predicted protein [Nematostella vectensis]
gi|156216446|gb|EDO37383.1| predicted protein [Nematostella vectensis]
Length = 91
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 67 ATGHEREELEAELEG-KNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG E+ E +A + G ++ + GP GTKD P +V S Y++RIVGC ED +
Sbjct: 3 ATGLEKAEYDALVAGYEDPFRLKMANGPPGTKDNPTIVPSGYEERIVGCVC--EEDATMI 60
Query: 126 VWFWLEKGKPHECPVCSQYFVLE 148
W L+ G P C C YF L+
Sbjct: 61 RWMLLKAGPPQRCD-CGNYFQLK 82
>gi|440791657|gb|ELR12895.1| Cytochrome c oxidase [Acanthamoeba castellanii str. Neff]
Length = 161
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 61 EDVNPVATGHEREE---LEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGG 117
+D + TG ER E EG IL TG FGT + P +V S++ RIVGC G
Sbjct: 51 DDTDARHTGMERLEKVPWTKLYEGDAIL-----TGKFGTLEEPTIVHSWFPSRIVGCQGS 105
Query: 118 EGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
+ HD++W + +G+ C C Q F L
Sbjct: 106 -ADHPHDILWHEVRRGRDTVCLECGQVFRL 134
>gi|295661390|ref|XP_002791250.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|50428890|gb|AAT77150.1| putative cytochrome c oxidase subunit IV [Paracoccidioides
brasiliensis]
gi|226280812|gb|EEH36378.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 197
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL ++ G +I ++ + GT D P +VKS D++ GC G D H V
Sbjct: 79 ATGLERLELLGKMNGVDIFDMRPLDSSRLGTLDNPIIVKSGGDEQYAGCTGFPA-DSHTV 137
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPP 156
+W + + +P E C C +E +GP P
Sbjct: 138 IWLTVSRKRPIERCSECGNVVKMEYIGPESDP 169
>gi|226292893|gb|EEH48313.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 313
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL ++ G ++ ++ + GT D P +VKS D++ GC G D H V
Sbjct: 195 ATGLERLELLGKMHGVDVFDMRPLDSSRLGTLDNPIIVKSGGDEQYAGCTGFPA-DSHTV 253
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPP 156
+W + + +P E C C +E +GP P
Sbjct: 254 IWLTVSRKRPIERCSECGNVVKMEYIGPESDP 285
>gi|326483368|gb|EGE07378.1| hypothetical protein TEQG_06363 [Trichophyton equinum CBS 127.97]
Length = 169
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER EL +++G +I + GT P +VKS ++ VGC G D H V
Sbjct: 12 STGLERLELLGKMQGIDIFDQKPLDASRLGTIQDPIIVKSAGEEHYVGCTGYPA-DSHTV 70
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPPDGHG 160
+W + K +P E C C ++ VGP P HG
Sbjct: 71 IWLTVSKDRPIERCSECGNTIKMDYVGPKEDPHAHG 106
>gi|124507103|ref|XP_001352148.1| cytochrome c oxidase subunit, putative [Plasmodium falciparum 3D7]
gi|23505178|emb|CAD51959.1| cytochrome c oxidase subunit, putative [Plasmodium falciparum 3D7]
Length = 273
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%)
Query: 55 SVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGC 114
S K+ D+ + E + A LE L+ GPFGT + P +V S + +R+V C
Sbjct: 114 SYKQLAIDMGMQIANSDNEHMLALLEYYEYLKSSPFVGPFGTIENPVLVPSVHVERVVCC 173
Query: 115 PGGEGEDEHDVVWFWLEKGKPHECPVCSQYFV 146
GG GE+EH ++F +G + C C Q F+
Sbjct: 174 TGGTGENEHVPLFFRCREGFLYRCGECDQIFM 205
>gi|388857050|emb|CCF49265.1| probable COX4-cytochrome-c oxidase chain IV [Ustilago hordei]
Length = 153
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL +L+G ++ +++ GT P V+S++ RIVGC G D HD
Sbjct: 61 ATGLERFELLGKLKGVDVFDMEPLQMTHLGTTKNPIKVQSFWPSRIVGCTGYPA-DSHDT 119
Query: 126 VWFWLEKG-KPHECPVCSQYFVLEVVG 151
++ L K K H CP C + + G
Sbjct: 120 IYLHLNKDLKHHRCPECGSVYEMNFEG 146
>gi|453086595|gb|EMF14637.1| cytochrome c oxidase polypeptide IV mitochondrial precursor
[Mycosphaerella populorum SO2202]
Length = 194
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER E+ +++G +I ++ GT + P +VKS+ D++ +GC G D H V
Sbjct: 74 STGLERLEILGKMQGVDIFDMRPLDASRKGTLEDPIIVKSFGDEQYIGCTGCPA-DSHVV 132
Query: 126 VWFWLEKGKP-HECPVCSQYFVLEVVGP 152
+W + +P CP C + +E VGP
Sbjct: 133 IWLVTSRERPAQRCPECGSNYQMEYVGP 160
>gi|296811362|ref|XP_002846019.1| cytochrome c oxidase polypeptide IV [Arthroderma otae CBS 113480]
gi|238843407|gb|EEQ33069.1| cytochrome c oxidase polypeptide IV [Arthroderma otae CBS 113480]
Length = 191
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER EL +++G +I + GT P VV+S ++ VGC G D H V
Sbjct: 77 STGLERLELLGKMQGIDIFDQKPLDASRLGTIQDPIVVQSAGEEHYVGCTGYPA-DSHTV 135
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPPDGHG 160
+W + K +P E C C +E VGP P HG
Sbjct: 136 IWLTVSKDRPIERCSECGNTIKMEYVGPKEDPHAHG 171
>gi|148682553|gb|EDL14500.1| mCG17741, isoform CRA_b [Mus musculus]
gi|148682555|gb|EDL14502.1| mCG17741, isoform CRA_b [Mus musculus]
Length = 78
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 90 PTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
P GTK+ P +V S +KRIVGC E D V+WFWL KG+ CP C ++ L
Sbjct: 16 PKAASGTKEDPNLVPSISNKRIVGCICEE--DNCTVIWFWLHKGESQRCPNCGTHYKL 71
>gi|209732912|gb|ACI67325.1| Cytochrome c oxidase subunit 5B, mitochondrial precursor [Salmo
salar]
Length = 126
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG E+ ++A +G + + P G+K P +V S KRIVGC E D VV
Sbjct: 41 ATGLEKIVMKAAQQGADPYSMLKPKEYAGSKADPHLVPSITTKRIVGCVCEE--DNTAVV 98
Query: 127 WFWLEKGKPHECPVCSQYFVL 147
WFW +G+ CP C ++ L
Sbjct: 99 WFWPHQGEAQRCPSCGSHYKL 119
>gi|119498215|ref|XP_001265865.1| cytochrome c subunit Vb, putative [Neosartorya fischeri NRRL 181]
gi|119414029|gb|EAW23968.1| cytochrome c subunit Vb, putative [Neosartorya fischeri NRRL 181]
Length = 191
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 71/162 (43%), Gaps = 25/162 (15%)
Query: 10 LKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVK----KRVEDVNP 65
L+ A ALA R APV +IA+R S + + + G + K ED+ P
Sbjct: 3 LQRTAFALA----RRAPVR-AIAARPFSSSIVRCQKKYEVKKEGKILPFEDIKSEEDLIP 57
Query: 66 -------------VATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRI 111
ATG ER EL +++G +I ++ GT D P +VKS D++
Sbjct: 58 PGAKPGTVPTDVEQATGLERLELIGKMQGIDIFDMRPLDASRKGTLDNPIIVKSAGDEQY 117
Query: 112 VGCPGGEGEDEHDVVWFWLEKGKPHE-CPVCSQYFVLEVVGP 152
GC G D H VW + + +P E C C LE VGP
Sbjct: 118 AGCTGYPA-DSHHTVWLTVSRDRPIERCGECGNVVKLEYVGP 158
>gi|193620134|ref|XP_001950954.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
isoform 1 [Acyrthosiphon pisum]
Length = 128
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
Query: 30 SIASRSLISRPLFASRHFSADSAG-TSVKKR-VEDVNPVATGHEREELEAELEGKNI-LE 86
+++S+ + P SR FSA +A T V D +ATG E++E+ L G +
Sbjct: 7 ALSSKIIFRNP---SRMFSASNAKFTKVNDEGFPDPLDLATGIEKKEMLLRLAGNDDPYN 63
Query: 87 IDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFV 146
+ GT D P +V S ++ RI+GC ED V W WL G+P C C +F
Sbjct: 64 LKAIKRGVGTSDKPTLVPSAFEARIIGCVC--EEDASHVKWMWLHSGEPKRC-YCGHWFK 120
Query: 147 LE 148
LE
Sbjct: 121 LE 122
>gi|410446425|gb|AFV69126.1| mitochondrial cytochrome c oxidase subunit Vb [Litopenaeus
vannamei]
Length = 121
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
Query: 35 SLISRPL-FASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEG-KNILEIDYPTG 92
SLI+R L SR ++ K + D ATG E++EL ++ G +N ++
Sbjct: 3 SLIARSLVLNSRRGVQLTSVRFANKMMADPMEHATGLEKQELLSKAAGNENPFDMRVYKR 62
Query: 93 PFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGP 152
G + P V S+Y++R+VGC ED + W WLEKG+ C C +F L P
Sbjct: 63 VSGDQTNPTSVPSFYERRLVGCIC--EEDATSINWMWLEKGESKRCE-CGYWFQLADAKP 119
>gi|321257069|ref|XP_003193458.1| cytochrome c oxidase polypeptide iv, mitochondrial precursor
[Cryptococcus gattii WM276]
gi|317459928|gb|ADV21671.1| Cytochrome c oxidase polypeptide iv, mitochondrial precursor,
putative [Cryptococcus gattii WM276]
Length = 158
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 15/134 (11%)
Query: 32 ASRSLISRPLFASRHFSADSAGTSVKKRVEDVNPVA------------TGHEREELEAEL 79
A R + P+F +R FS +A ++ + + P A TG ER EL L
Sbjct: 14 ALRRTLPAPVFTARAFSISAARSAGHGPPQLLGPGAKAGEVPNDENQSTGLERFELLGNL 73
Query: 80 EGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKG-KPHE 137
EG ++ ++ GT + P V S + +R +GC G D HD +W + K H
Sbjct: 74 EGVDVFDMKPLEVTRLGTVEDPIPVYSLFPERQIGCTGFP-VDSHDTIWLSVNHTLKNHR 132
Query: 138 CPVCSQYFVLEVVG 151
CP C + L G
Sbjct: 133 CPECGSVYTLNFQG 146
>gi|91086119|ref|XP_968221.1| PREDICTED: similar to AGAP008724-PA [Tribolium castaneum]
gi|270011057|gb|EFA07505.1| hypothetical protein TcasGA2_TC009596 [Tribolium castaneum]
Length = 121
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Query: 35 SLISRPLFASRHFSADSAGTSVKKRVEDVNPV--ATGHEREELEAELEG-KNILEIDYPT 91
SL SR + + +V +PV ATG E+ EL A++ G +N ++
Sbjct: 3 SLCSRIAVNTARKNVLCTSYRFATKVTMGDPVEHATGLEKRELMAKVAGNENPFDLKVIK 62
Query: 92 GPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
GTKD P + S +D R+VGC E+ V W WL KG+P C C +F L
Sbjct: 63 RGPGTKDKPNEIPSAFDARLVGCIC--EEESTSVNWMWLYKGQPRRCE-CGHWFNL 115
>gi|255714967|ref|XP_002553765.1| KLTH0E06578p [Lachancea thermotolerans]
gi|238935147|emb|CAR23328.1| KLTH0E06578p [Lachancea thermotolerans CBS 6340]
Length = 155
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG R EL +LEG ++ + + GT + P +V +Y D R VGC G D H +
Sbjct: 62 ATGLARLELLGKLEGIDVFDTKPLDSSRIGTMENPIIVDTYDDYRYVGCTGSPA-DSHSI 120
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
+W K C C + V P G P DDDHH
Sbjct: 121 MWLKPSVNKVARCWECGSVY---KVNPVGVPT---DDDHH 154
>gi|156058382|ref|XP_001595114.1| cytochrome c oxidase polypeptide IV, mitochondrial precursor
[Sclerotinia sclerotiorum 1980]
gi|154700990|gb|EDO00729.1| cytochrome c oxidase polypeptide IV, mitochondrial precursor
[Sclerotinia sclerotiorum 1980 UF-70]
Length = 193
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ +++G +I ++ GT + P +VKS+ D++ GC G D H
Sbjct: 73 ATGLERLEILGKMQGVDIFDMKPLDASRKGTLEDPIIVKSFGDEQYAGC-TGYPVDSHVT 131
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGP 152
+W + + +P E CP C +E VGP
Sbjct: 132 IWLTMSRDRPIERCPECGNVLKMEYVGP 159
>gi|297493724|gb|ADI40584.1| cytochrome c oxidase subunit Vb [Rousettus leschenaultii]
Length = 105
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
ATG ERE + A +G + + P GTK+ P +V S +KRIVGC ED ++
Sbjct: 37 ATGLEREVMMAARKGLDPYNMLAPKPASGTKEDPNLVPSISNKRIVGCIC--EEDNSAII 94
Query: 127 WFWLEKGKPH 136
WFWL KG+
Sbjct: 95 WFWLHKGETQ 104
>gi|358382948|gb|EHK20618.1| hypothetical protein TRIVIDRAFT_77631 [Trichoderma virens Gv29-8]
Length = 196
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ ++EG +I ++ GT + P +V+S ++++ GC G D H V
Sbjct: 81 ATGLERLEILGKMEGVDIFDMRPLDASRKGTLENPILVRSAGEEQLAGCTGSPA-DSHVV 139
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVG 151
+W L K +P E CP C + +E VG
Sbjct: 140 IWLGLSKERPIERCPECGSVYKMEYVG 166
>gi|350405789|ref|XP_003487551.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Bombus impatiens]
Length = 125
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 17/129 (13%)
Query: 36 LISRPLFAS--RHFSADSAGTSVKKRVEDVNPV--ATGHEREELEAELEG------KNIL 85
L SR +F + R F D+ + +K+ +P+ ATG E+ EL A G +
Sbjct: 4 LCSRTIFQTCRRQFYRDAVRYTKEKKDTFPDPLELATGLEKRELLAAAAGDFDPYHMKAI 63
Query: 86 EIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYF 145
EI + TK+ P +V S + R+VGC E D V W WL +G+P C C +F
Sbjct: 64 EILRDS----TKENPNLVPSAFKSRVVGCLCEE--DTAHVNWMWLHEGQPRRCE-CGHWF 116
Query: 146 VLEVVGPGG 154
L V P G
Sbjct: 117 KLTEVAPLG 125
>gi|119189057|ref|XP_001245135.1| hypothetical protein CIMG_04576 [Coccidioides immitis RS]
gi|303323373|ref|XP_003071678.1| Cytochrome c oxidase polypeptide IV, mitochondrial precursor,
putative [Coccidioides posadasii C735 delta SOWgp]
gi|240111380|gb|EER29533.1| Cytochrome c oxidase polypeptide IV, mitochondrial precursor,
putative [Coccidioides posadasii C735 delta SOWgp]
gi|320035215|gb|EFW17157.1| cytochrome c oxidase polypeptide IV [Coccidioides posadasii str.
Silveira]
gi|392868040|gb|EAS33769.2| cytochrome c oxidase polypeptide IV [Coccidioides immitis RS]
Length = 187
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER EL ++EG +I + GT D P +VKS ++ VGC G D H+V
Sbjct: 74 STGLERLELLGKMEGVDIFNMKPLDASRLGTLDNPILVKSGGPEQYVGCTGYPA-DSHNV 132
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
+W + + +P E C C ++ +GP +DDHH
Sbjct: 133 IWLTVSRDRPLERCSECGNCIKMDYIGP-------KEDDHH 166
>gi|346976013|gb|EGY19465.1| cytochrome c oxidase polypeptide IV [Verticillium dahliae VdLs.17]
Length = 194
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER E+ ++EG +I ++ GT + P V+S D++ +GC G D H V
Sbjct: 78 STGLERLEILGKMEGVDIFDMRPLDASRTGTMENPISVRSAGDEQYLGCTGSPA-DSHVV 136
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGP 152
W + + +P E CP C + +E VGP
Sbjct: 137 KWLTISRERPIERCPECGSVYNMEYVGP 164
>gi|260908469|gb|ACX53954.1| cytochrome c oxidase polypeptide Vb [Rhipicephalus sanguineus]
Length = 125
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Query: 67 ATGHEREELEAELEGKNI---LEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEH 123
ATG ER+EL A G + +++ + GP GTKD P ++ S+ +KR++GC ED+
Sbjct: 41 ATGRERQELLAMAAGNDDPFDMKV-FKRGP-GTKDNPNLIPSHLEKRMIGCIC--EEDQT 96
Query: 124 DVVWFWLEKGKPHECPVCSQYF 145
+ W WL +G P C C +F
Sbjct: 97 HINWMWLHRGDPKRCE-CGYWF 117
>gi|90820020|gb|ABD98768.1| putative mitochondrial cytochrome c oxidase polypeptide Vb
[Graphocephala atropunctata]
Length = 119
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 38 SRPLFASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEG-KNILEIDYPTGPFGT 96
+R + + + + ++ + + K +++ +ATG E+ EL A+ G ++ ++ GT
Sbjct: 6 ARVVVQNSYRNLYTSSSRLAKLLDEPINIATGIEKRELLAKAAGNEDPFDLRVLKRGKGT 65
Query: 97 KDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
KD P V S D RI+GC ED V W WL +G+P C C +F L
Sbjct: 66 KDCPNEVPSATDARIIGCIC--EEDATTVSWMWLHQGQPRRCN-CGHWFKL 113
>gi|121710590|ref|XP_001272911.1| cytochrome c subunit Vb, putative [Aspergillus clavatus NRRL 1]
gi|119401061|gb|EAW11485.1| cytochrome c subunit Vb, putative [Aspergillus clavatus NRRL 1]
Length = 191
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL +++G +I ++ GT + P +VKS D++ GC G D H V
Sbjct: 73 ATGLERLELVGKMQGIDIFDMRPLDASRKGTLEDPIIVKSAGDEQYAGCTGFPA-DSHQV 131
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
W + + +P E C C LE VGP P H D HH
Sbjct: 132 NWLTVSRERPLERCGECGNVVKLEYVGPDEDPHAH-DHGHH 171
>gi|125987063|ref|XP_001357294.1| GA10709 [Drosophila pseudoobscura pseudoobscura]
gi|195156141|ref|XP_002018959.1| GL25676 [Drosophila persimilis]
gi|198477059|ref|XP_002136780.1| GA28177 [Drosophila pseudoobscura pseudoobscura]
gi|54645625|gb|EAL34363.1| GA10709 [Drosophila pseudoobscura pseudoobscura]
gi|194115112|gb|EDW37155.1| GL25676 [Drosophila persimilis]
gi|198145099|gb|EDY71803.1| GA28177 [Drosophila pseudoobscura pseudoobscura]
Length = 120
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 67 ATGHEREELEAELEG-KNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG E+ EL A+ G +N ++ GTK+ P ++ S +D RIVGC ED+ V
Sbjct: 36 ATGIEKRELLAKAAGNENPFDMKVFKRGAGTKENPNLIPSAFDARIVGCIC--EEDQTYV 93
Query: 126 VWFWLEKGKPHECPVCSQYFVL 147
W WL+KG C C +F L
Sbjct: 94 QWMWLQKGNQKRCE-CGHWFKL 114
>gi|194761486|ref|XP_001962960.1| GF14170 [Drosophila ananassae]
gi|190616657|gb|EDV32181.1| GF14170 [Drosophila ananassae]
Length = 120
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 67 ATGHEREELEAELEGK-NILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG E+ EL A+ G N ++ GTK+ P ++ S +D RIVGC ED+ V
Sbjct: 36 ATGIEKRELLAKAAGNDNPFDMKVFKRGAGTKENPNLIPSAFDARIVGCIC--EEDQTYV 93
Query: 126 VWFWLEKGKPHECPVCSQYFVL 147
W WL+KG C C +F L
Sbjct: 94 QWMWLQKGNQKRCE-CGHWFKL 114
>gi|322711269|gb|EFZ02843.1| hypothetical protein MAA_02425 [Metarhizium anisopliae ARSEF 23]
Length = 224
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ ++EG +I ++ GT + P +V+S D++ GC G D H V
Sbjct: 108 ATGLERLEILGKMEGVDIFDMRPLDASRKGTMENPIMVRSAGDEQYAGCTGSPA-DSHVV 166
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVG 151
W L K +P E CP C + +E VG
Sbjct: 167 TWLGLSKERPIERCPECGSVYKMEYVG 193
>gi|85109713|ref|XP_963051.1| cytochrome c oxidase polypeptide IV, mitochondrial precursor
[Neurospora crassa OR74A]
gi|62297096|sp|P06809.2|COX4_NEUCR RecName: Full=Cytochrome c oxidase subunit 4, mitochondrial;
AltName: Full=Cytochrome c oxidase polypeptide IV;
Flags: Precursor
gi|28924701|gb|EAA33815.1| cytochrome c oxidase polypeptide IV, mitochondrial precursor
[Neurospora crassa OR74A]
gi|336469151|gb|EGO57313.1| cytochrome c oxidase polypeptide 4, mitochondrial [Neurospora
tetrasperma FGSC 2508]
gi|350291221|gb|EGZ72435.1| cytochrome c oxidase polypeptide IV mitochondrial precursor
[Neurospora tetrasperma FGSC 2509]
Length = 186
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ ++EG ++ ++ GT + P V+S D++ GC G D H+V
Sbjct: 70 ATGLERLEILGKMEGVDVFDMKPLDASRRGTMENPISVRSAGDEQYAGCTGFPA-DSHNV 128
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGP 152
+W + + +P E CP C + ++ VGP
Sbjct: 129 IWLTMTRERPVERCPECGNVYKMDYVGP 156
>gi|398412880|ref|XP_003857758.1| hypothetical protein MYCGRDRAFT_102012 [Zymoseptoria tritici
IPO323]
gi|339477643|gb|EGP92734.1| hypothetical protein MYCGRDRAFT_102012 [Zymoseptoria tritici
IPO323]
Length = 193
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ +++G ++ ++ GT + P VKS+ D++ +GC G D H V
Sbjct: 74 ATGLERLEILGKMQGVDVFDMKPLDASRKGTLEDPITVKSFGDEQYLGC-TGYPVDTHVV 132
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGP 152
+W + +P E CP C + +E VGP
Sbjct: 133 IWLTTSRERPVERCPECGSVYKMEYVGP 160
>gi|452845007|gb|EME46941.1| hypothetical protein DOTSEDRAFT_70770 [Dothistroma septosporum
NZE10]
Length = 198
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ +++G ++ ++ GT + P VKS+ D++ +GC G D H V
Sbjct: 75 ATGLERLEILGKMQGVDVFDMRPLDASRKGTLEDPITVKSFGDEQYLGC-TGYPVDSHVV 133
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGP 152
+W + +P E CP C + +E VGP
Sbjct: 134 IWLTTSRDRPIERCPECGSVYKMEYVGP 161
>gi|302409017|ref|XP_003002343.1| cytochrome c oxidase polypeptide IV [Verticillium albo-atrum
VaMs.102]
gi|261359264|gb|EEY21692.1| cytochrome c oxidase polypeptide IV [Verticillium albo-atrum
VaMs.102]
Length = 194
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER E+ ++EG +I ++ GT + P V+S D++ +GC G D H V
Sbjct: 78 STGLERLEILGKMEGVDIFDMRPLDASRTGTMENPINVRSAGDEQYLGCTGSPA-DSHVV 136
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGP 152
W + + +P E CP C + +E VGP
Sbjct: 137 KWLTISRERPIERCPECGSVYNMEYVGP 164
>gi|336271149|ref|XP_003350333.1| hypothetical protein SMAC_02046 [Sordaria macrospora k-hell]
gi|380090855|emb|CCC11388.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 186
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ ++EG ++ ++ GT + P V+S D++ GC G D H+V
Sbjct: 70 ATGLERLEILGKMEGVDVFDMKPLDASRRGTMENPISVRSAGDEQYAGCTGFPA-DSHNV 128
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGP 152
+W + + +P E CP C + + VGP
Sbjct: 129 IWLTMTRERPIERCPECGNVYKMNYVGP 156
>gi|149046368|gb|EDL99261.1| cytochrome c oxidase subunit Vb, isoform CRA_b [Rattus norvegicus]
gi|149046370|gb|EDL99263.1| cytochrome c oxidase subunit Vb, isoform CRA_b [Rattus norvegicus]
Length = 78
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 90 PTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
P GTK+ P +V S +KRIVGC E D V+WFWL +G+ CP C ++ L
Sbjct: 16 PKAASGTKEDPNLVPSVSNKRIVGCICEE--DNCTVIWFWLHQGESQRCPNCGTHYKL 71
>gi|258576175|ref|XP_002542269.1| cytochrome c oxidase polypeptide IV [Uncinocarpus reesii 1704]
gi|237902535|gb|EEP76936.1| cytochrome c oxidase polypeptide IV [Uncinocarpus reesii 1704]
Length = 188
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL +++G +I + GT D P +VKS ++ VGC G D H V
Sbjct: 74 ATGLERLELLGKMKGIDIFNMQPLDASRLGTLDNPIMVKSGGPEQYVGCTGYPA-DSHTV 132
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
+W + + +P E C C ++ +GP +DDHH
Sbjct: 133 IWLTVSRDRPVERCSECGNCVKMDYIGP-------KEDDHH 166
>gi|336370273|gb|EGN98613.1| COX5B, subunit VB of cytochrome c oxidase [Serpula lacrymans var.
lacrymans S7.3]
gi|336383031|gb|EGO24180.1| subunit VB of cytochrome c oxidase,COX5B [Serpula lacrymans var.
lacrymans S7.9]
Length = 156
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER +L E+EG + +++ GT + P V S +RIVGC G D H++
Sbjct: 63 ATGLERFQLLGEIEGVDSFDLEPLDASRVGTLENPIKVFSLDTERIVGCTGSPA-DSHEL 121
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGH 159
WF ++ K C C + L+ G D H
Sbjct: 122 HWFTVKHDKTRRCAECGSAYALDFQGSLDAHDAH 155
>gi|405119625|gb|AFR94397.1| cytochrome c oxidase polypeptide IV [Cryptococcus neoformans var.
grubii H99]
Length = 158
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Query: 32 ASRSLISRPLFASRHFSADSAGTSVKKRVEDVNPVA------------TGHEREELEAEL 79
A R + P F +R FS +A ++ + + P A TG ER EL L
Sbjct: 14 ALRRTLPAPAFTARAFSISAARSAGHGPPQLLGPGAKAGEVPNDENQSTGLERFELLGNL 73
Query: 80 EGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKG-KPHE 137
EG ++ ++ GT + P + S + +R +GC G D HD +W + K H
Sbjct: 74 EGVDVFDMKPLEVTRLGTVEDPIPIYSLFPERQIGCTGFP-VDSHDTIWLNVNHTLKNHR 132
Query: 138 CPVCSQYFVLEVVG 151
CP C + L G
Sbjct: 133 CPECGSVYTLNFQG 146
>gi|402081659|gb|EJT76804.1| cytochrome c oxidase polypeptide IV [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 188
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ ++EG ++ ++ + GT P +V+S D++ GC G D H+V
Sbjct: 74 ATGLERLEILGKMEGVDVFDMRPLDSSRRGTLQDPILVRSAGDEQYAGC-TGYPRDSHEV 132
Query: 126 VWFWLEKGKP-HECPVCSQYFVLEVVGP 152
W + + +P CP C Q + + VGP
Sbjct: 133 NWLTMSRERPVGRCPECGQVYKMNYVGP 160
>gi|190347349|gb|EDK39603.2| hypothetical protein PGUG_03701 [Meyerozyma guilliermondii ATCC
6260]
Length = 154
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGP-FGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ + EG ++ +D P GT P +V +Y R VGC G GE EH
Sbjct: 63 ATGLERYEILGKREGIDVFNLDKPIFEGSGTMKDPYLVPTYIGHRYVGCRGKGGE-EHKA 121
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVG 151
W +++G P C C + + +G
Sbjct: 122 YWLDVKEGTPARCWQCGTVYAAKYLG 147
>gi|255083286|ref|XP_002504629.1| predicted protein [Micromonas sp. RCC299]
gi|226519897|gb|ACO65887.1| predicted protein [Micromonas sp. RCC299]
Length = 124
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 29 PSIASRSLISRPLFASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEGKNILE-I 87
P + ++ P++A+R D A S ATG E +EL+A EGK+ +
Sbjct: 8 PMDSMHRTVAAPIYAARRAMGDKAPVSTDWEH------ATGLELKELQAAAEGKDFFDHY 61
Query: 88 DYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFV 146
D+ P GTK++P VV S R+VG + +D+ V W +E GKP + S++FV
Sbjct: 62 DFLKQPNGTKESPVVVTSSMPYRVVGA--TDPDDDTIVHWGRVEAGKP-PVKIGSEWFV 117
>gi|146416701|ref|XP_001484320.1| hypothetical protein PGUG_03701 [Meyerozyma guilliermondii ATCC
6260]
Length = 154
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGP-FGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ + EG ++ +D P GT P +V +Y R VGC G GE EH
Sbjct: 63 ATGLERYEILGKREGIDVFNLDKPIFEGSGTMKDPYLVPTYIGHRYVGCRGKGGE-EHKA 121
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVG 151
W +++G P C C + + +G
Sbjct: 122 YWLDVKEGTPARCWQCGTVYAAKYLG 147
>gi|269146716|gb|ACZ28304.1| cytochrome c oxidase subunit Vb/COX4 [Simulium nigrimanum]
Length = 119
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 67 ATGHEREELEAELEGK-NILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG E+ EL A+ G N ++ GTK++P ++ S +D R+VGC ED+ V
Sbjct: 35 ATGIEKRELLAKQAGNDNPFDMKVFKRGAGTKESPNLIPSAFDARLVGCIC--EEDQTFV 92
Query: 126 VWFWLEKGKPHECPVCSQYFVL 147
W WL +G P C C +F L
Sbjct: 93 QWMWLYQGTPKRCE-CGHWFKL 113
>gi|354546398|emb|CCE43128.1| hypothetical protein CPAR2_207710 [Candida parapsilosis]
Length = 154
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYP-TGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG +R EL + EG ++ +++ P T GT D P +V +Y R VGC G E +H
Sbjct: 64 STGLQRLELLGKREGVDVFDMEMPITEGKGTMDDPFLVPTYIGYRYVGCKG-TAELDHKP 122
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVGPGG 154
W +E+GKP C C + +G G
Sbjct: 123 YWMKVEEGKPSRCWHCGTVLKTKYLGEPG 151
>gi|171681110|ref|XP_001905499.1| hypothetical protein [Podospora anserina S mat+]
gi|170940513|emb|CAP65741.1| unnamed protein product [Podospora anserina S mat+]
Length = 183
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER E+ ++E ++ ++ GT P +V+S +++ GC G D H+V
Sbjct: 68 STGLERLEILGKMESVDVFDMRPLDASRLGTLSNPVLVRSAGEEQFAGCTGVPA-DSHNV 126
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGP 152
+W + + +P E CP C + +E VGP
Sbjct: 127 IWLGMTRERPVERCPECGSVYKMEYVGP 154
>gi|392564274|gb|EIW57452.1| COX5B-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 155
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER +L +EG + ++ + GT P V S +RI+GC G E H++
Sbjct: 62 ATGLERLQLLGAIEGVEVFDLAPLDSSRIGTLADPIKVYSLEPERIIGCTGSPAES-HEL 120
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVG 151
+W L K K CP C + L+ G
Sbjct: 121 LWMNLNKEKNRRCPECGSVYALDYQG 146
>gi|291234554|ref|XP_002737212.1| PREDICTED: cytochrome c oxidase polyprotein Vb-like [Saccoglossus
kowalevskii]
Length = 129
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 67 ATGHEREELEAELEG-KNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG E+ E++ + G ++ ++ GT+++P +V S ++KR+VGC E+E V
Sbjct: 39 ATGMEKLEMDMKEAGLEDPFDLKVKNVVPGTRESPTLVPSIFEKRMVGCV---CEEEATV 95
Query: 126 V-WFWLEKGKPHECPVCSQYFVLEVVGPGGP 155
V W WLEKG C C +F L P P
Sbjct: 96 VNWMWLEKGGVQRCE-CGHFFQLTEAAPLQP 125
>gi|307196207|gb|EFN77864.1| Cytochrome c oxidase subunit 5B, mitochondrial [Harpegnathos
saltator]
Length = 119
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 36 LISRPLFASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEGKNI-LEIDYPTGPF 94
L +R + + + +K+ D ATG E++E+ A L G + + P
Sbjct: 4 LCARTVLQTCRRPISYSLVCYEKQFADPLDHATGLEKKEMLARLAGNDDPYNMSIKRRPH 63
Query: 95 GTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGP 152
TK+ P +V S ++ RI+GC ED V W WL +G P C C +F L P
Sbjct: 64 STKENPNIVYSSFESRIMGCIC--DEDALHVNWMWLHQGPPRRCE-CGHWFKLVEKAP 118
>gi|150864820|ref|XP_001383799.2| Cytochrome c oxidase polypeptide IV, mitochondrial precursor
[Scheffersomyces stipitis CBS 6054]
gi|149386076|gb|ABN65770.2| Cytochrome c oxidase polypeptide IV, mitochondrial precursor
[Scheffersomyces stipitis CBS 6054]
Length = 154
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGP-FGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ + EG ++ +++ P GT + P +V +Y R VGC G +GED H
Sbjct: 63 ATGLERLEILGKREGIDVFDLENPIYEGKGTFEDPLLVPTYIGYRYVGCRGKDGED-HKP 121
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVG 151
W +E+GK C C + +G
Sbjct: 122 YWMKVEEGKKSRCWQCGTVLAAKYLG 147
>gi|260908508|gb|ACX53973.1| cytochrome c oxidase polypeptide Vb [Rhipicephalus sanguineus]
Length = 125
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
Query: 67 ATGHEREELEAELEGKNI---LEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEH 123
ATG E++EL A G + +++ + GP GTKD P ++ S+ +KR++GC ED+
Sbjct: 41 ATGREKQELLAHAAGNDDPFDMKV-FKRGP-GTKDNPNLIPSHLEKRMIGCIC--EEDQT 96
Query: 124 DVVWFWLEKGKPHECPVCSQYFVL 147
+ W WL +G P C C +F +
Sbjct: 97 HINWMWLHRGDPKRCE-CGYWFKI 119
>gi|348672244|gb|EGZ12064.1| hypothetical protein PHYSODRAFT_286921 [Phytophthora sojae]
Length = 133
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 67 ATGHEREELEAELEG-----KNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGED 121
A G ER+ELEA G ++ LE + G +KD P +V S+ D R VG D
Sbjct: 35 AVGRERQELEAAEIGVTQFNRDPLETEETQG--NSKDDPILVPSFNDVRTVGVAHN---D 89
Query: 122 EHDVVWFWLEKGKPHECPVCSQYFVL 147
V WF +EKGK H P +YF+L
Sbjct: 90 ASYVYWFNMEKGKVHYLPQIEKYFML 115
>gi|346469885|gb|AEO34787.1| hypothetical protein [Amblyomma maculatum]
Length = 167
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Query: 67 ATGHEREELEAELEGKNI---LEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEH 123
ATG E++EL A G + +++ + GP GTKD P ++ S+ +KR++GC ED+
Sbjct: 83 ATGREKQELLAHAAGNDDPFDMKV-FKRGP-GTKDNPNLIPSHLEKRMIGCIC--EEDQT 138
Query: 124 DVVWFWLEKGKPHECPVCSQYF 145
+ W WL +G P C C +F
Sbjct: 139 HINWMWLHRGDPKRCE-CGYWF 159
>gi|195118826|ref|XP_002003937.1| GI20346 [Drosophila mojavensis]
gi|193914512|gb|EDW13379.1| GI20346 [Drosophila mojavensis]
Length = 120
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 67 ATGHEREELEAELEGK-NILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG E+ EL + G N ++ GTK+ P ++ S +D RIVGC ED+ V
Sbjct: 36 ATGIEKRELLLKAAGNDNPFDMKVFKRGAGTKENPNLIPSAFDARIVGCIC--EEDQTYV 93
Query: 126 VWFWLEKGKPHECPVCSQYFVL 147
W WL+KG C C +F L
Sbjct: 94 QWMWLQKGNQKRCE-CGHWFKL 114
>gi|242017904|ref|XP_002429424.1| cytochrome c oxidase polypeptide Vb isoform 1, putative [Pediculus
humanus corporis]
gi|212514350|gb|EEB16686.1| cytochrome c oxidase polypeptide Vb isoform 1, putative [Pediculus
humanus corporis]
Length = 118
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 14/119 (11%)
Query: 36 LISRPLFASRHFSADSAGTSVKKRVEDVNP---VATGHE---REELEAELEGKNILEIDY 89
L SR L R + ++ T+ + +DV P + TG E R+E A + +L+
Sbjct: 4 LFSRVL---RRCAKNNLYTATRFSSKDVPPPDELVTGLEEFQRKEFYAGNDDPFLLKAVK 60
Query: 90 PTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLE 148
TK+ P +V SYYD R++GC ED + + W WL KG+P C C +F LE
Sbjct: 61 RHA--STKNNPNLVPSYYDCRVIGCVC--EEDSYAITWMWLFKGEPKRCQ-CGHWFKLE 114
>gi|159128847|gb|EDP53961.1| cytochrome c subunit Vb, putative [Aspergillus fumigatus A1163]
Length = 191
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 25/162 (15%)
Query: 10 LKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGT-----SVKKRVEDVN 64
L+ A ALA R APV ++A+R S + + + G +K + +
Sbjct: 3 LQRTAFALA----RRAPVR-AVAARPFSSSVVRCQKKYEVKKEGKILPFEEIKTEEDLIA 57
Query: 65 P------------VATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRI 111
P ATG ER EL +++G +I ++ GT D P +VKS D++
Sbjct: 58 PGAKPGTVPTDVEQATGLERLELIGKMQGIDIFDMRPLDASRKGTLDNPIIVKSAGDEQY 117
Query: 112 VGCPGGEGEDEHDVVWFWLEKGKPHE-CPVCSQYFVLEVVGP 152
GC G D H VW + + +P E C C LE +GP
Sbjct: 118 AGCTGYPA-DSHHTVWLTVSRDRPIERCGECGNVVKLEYIGP 158
>gi|402224940|gb|EJU05002.1| COX5B-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 169
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPF-----GTKDAPAVVKSYYDKRIVGCPGGEGED 121
ATG ER +L E+EG ++ + GP GT P +V+ D+RIVGC G D
Sbjct: 67 ATGLERLQLLGEIEGIDV----FDQGPLEVNRLGTLADPIMVECLADERIVGCTGFPA-D 121
Query: 122 EHDVVWF--WLEKGKPHECPVCSQYFVLEVVGP 152
HD +W + H CP C + L+ + P
Sbjct: 122 SHDTIWLSCTIHGQNRHRCPECGCVYALDDLRP 154
>gi|448511448|ref|XP_003866530.1| Cox4 cytochrome c oxidase subunit IV [Candida orthopsilosis Co
90-125]
gi|380350868|emb|CCG21091.1| Cox4 cytochrome c oxidase subunit IV [Candida orthopsilosis Co
90-125]
Length = 154
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYP-TGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG +R EL + EG ++ +++ P T GT + P +V +Y R VGC G E +H
Sbjct: 64 STGLQRLELLGKREGVDVFDMEMPITEGKGTMEDPFLVPTYIGYRYVGCKG-TAEQDHKP 122
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVGPGG 154
W +E+GKP C C + +G G
Sbjct: 123 YWMKVEEGKPSRCWHCGTVLKTKYLGEPG 151
>gi|195384942|ref|XP_002051171.1| GJ13698 [Drosophila virilis]
gi|194147628|gb|EDW63326.1| GJ13698 [Drosophila virilis]
Length = 120
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 67 ATGHEREELEAELEGK-NILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG E+ EL + G N ++ GTK+ P ++ S +D RIVGC ED+ V
Sbjct: 36 ATGIEKRELLLKAAGNDNPFDMKVFKRGAGTKENPNLIPSAFDARIVGCIC--EEDQTYV 93
Query: 126 VWFWLEKGKPHECPVCSQYFVL 147
W WL+KG C C +F L
Sbjct: 94 QWMWLQKGNQKRCE-CGHWFKL 114
>gi|72009818|ref|XP_786378.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 128
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 31 IASRSLISRPLFASRH--FSADSAGTSVKKRVEDVNPVATGHEREELEAELEG-KNILEI 87
+A+ +L L A+R +S S + + D ATG E++EL+ G + ++
Sbjct: 1 MATITLRKCALTAARRCLYSQSSRAMAAGGGIPDNFEHATGLEKKELDRIKAGDSDPFQL 60
Query: 88 DYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
+ GTK P V S + KRIVGC E++ + W WL G+P C C +F L
Sbjct: 61 NVRRVAAGTKTKPVEVTSAFQKRIVGCIC--EEEQTHINWMWLYTGEPQRCE-CGHWFKL 117
Query: 148 EVV 150
+ V
Sbjct: 118 QEV 120
>gi|20129279|ref|NP_609046.1| cytochrome c oxidase subunit Vb [Drosophila melanogaster]
gi|195338668|ref|XP_002035946.1| GM16172 [Drosophila sechellia]
gi|195577056|ref|XP_002078389.1| GD23418 [Drosophila simulans]
gi|7297135|gb|AAF52402.1| cytochrome c oxidase subunit Vb [Drosophila melanogaster]
gi|17945051|gb|AAL48587.1| RE06394p [Drosophila melanogaster]
gi|124014110|gb|ABM88305.1| mitochondrial cytochrome c oxidase subunit 5B isoform 1 [Drosophila
simulans]
gi|194129826|gb|EDW51869.1| GM16172 [Drosophila sechellia]
gi|194190398|gb|EDX03974.1| GD23418 [Drosophila simulans]
gi|220949344|gb|ACL87215.1| CG11015-PA [synthetic construct]
gi|220958566|gb|ACL91826.1| CG11015-PA [synthetic construct]
Length = 120
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 67 ATGHEREELEAELEGK-NILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG E+ EL + G N ++ GTK+ P ++ S +D RIVGC ED+ V
Sbjct: 36 ATGIEKRELLLKAAGNDNPFDMKVFKRGAGTKENPNLIPSAFDARIVGCIC--EEDQTYV 93
Query: 126 VWFWLEKGKPHECPVCSQYFVL 147
W WL+KG C C +F L
Sbjct: 94 QWMWLQKGNQKRCE-CGHWFKL 114
>gi|146322777|ref|XP_749436.2| cytochrome c subunit Vb [Aspergillus fumigatus Af293]
gi|129556797|gb|EAL87398.2| cytochrome c subunit Vb, putative [Aspergillus fumigatus Af293]
Length = 191
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 25/162 (15%)
Query: 10 LKAQALALAQYSCRSAPVNPSIASRSLISRPLFASRHFSADSAGT-----SVKKRVEDVN 64
L+ A ALA R APV ++A+R S + + + G +K + +
Sbjct: 3 LQRTAFALA----RRAPVR-AVAARPFSSSVVRCQKKYEVKKEGKILPFEEIKTEDDLIA 57
Query: 65 P------------VATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRI 111
P ATG ER EL +++G +I ++ GT D P +VKS D++
Sbjct: 58 PGAKPGTVPTDVEQATGLERLELIGKMQGIDIFDMRPLDASRKGTLDNPIIVKSAGDEQY 117
Query: 112 VGCPGGEGEDEHDVVWFWLEKGKPHE-CPVCSQYFVLEVVGP 152
GC G D H VW + + +P E C C LE +GP
Sbjct: 118 AGCTGYPA-DSHHTVWLTVSRDRPIERCGECGNVVKLEYIGP 158
>gi|157119566|ref|XP_001659427.1| cytochrome c oxidase, subunit VB, putative [Aedes aegypti]
gi|157134235|ref|XP_001663201.1| cytochrome c oxidase, subunit VB, putative [Aedes aegypti]
gi|108870556|gb|EAT34781.1| AAEL013007-PA [Aedes aegypti]
gi|108875295|gb|EAT39520.1| AAEL008697-PA [Aedes aegypti]
Length = 119
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 35 SLISRPLFASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEGKN--ILEIDYPTG 92
SL R + + + K + D ATG E+ EL A G N + G
Sbjct: 3 SLCGRLVLNAARRNVTYTPVRFCKMMNDPIEHATGLEKRELLARQAGDNDPFDMRVFKRG 62
Query: 93 PFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
P GTK++P ++ S ++ R+VGC ED+ + W WL +G P C C +F L
Sbjct: 63 P-GTKESPNMIPSAFESRLVGCVC--EEDQTYIQWMWLHQGHPKRCE-CGHWFKL 113
>gi|392595059|gb|EIW84383.1| COX5B-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 153
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 67 ATGHEREELEAELEGKNILEIDYP---TGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEH 123
ATG ER +L E++G + DY + GT + P V S +R+VGC G D H
Sbjct: 60 ATGLERLQLLGEMQG--VPAFDYEPLDSSRVGTLEDPIKVFSLDVERVVGCTGSPA-DSH 116
Query: 124 DVVWFWLEKGKPHECPVCSQYFVLEVVG 151
+V WF ++K K CP C + L+ G
Sbjct: 117 EVHWFKVKKDKTRRCPECGSAYALDFQG 144
>gi|157423509|gb|AAI53400.1| Zgc:153978 protein [Danio rerio]
Length = 143
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
A G ER L+A +G++ I P GT++ P +V S +KR+VGC ED +V
Sbjct: 41 AAGLERRVLQAMKKGQDPYSILRPKQYTGTREDPHIVPSINNKRLVGCLC--EEDNTAIV 98
Query: 127 WFWLEKG 133
WFWL +G
Sbjct: 99 WFWLHEG 105
>gi|124014098|gb|ABM88299.1| mitochondrial cytochrome c oxidase subunit 5B isoform 1 [Drosophila
simulans]
gi|124014100|gb|ABM88300.1| mitochondrial cytochrome c oxidase subunit 5B isoform 1 [Drosophila
simulans]
gi|124014102|gb|ABM88301.1| mitochondrial cytochrome c oxidase subunit 5B isoform 1 [Drosophila
simulans]
gi|124014104|gb|ABM88302.1| mitochondrial cytochrome c oxidase subunit 5B isoform 1 [Drosophila
simulans]
gi|124014106|gb|ABM88303.1| mitochondrial cytochrome c oxidase subunit 5B isoform 1 [Drosophila
simulans]
gi|124014108|gb|ABM88304.1| mitochondrial cytochrome c oxidase subunit 5B isoform 1 [Drosophila
simulans]
gi|124014112|gb|ABM88306.1| mitochondrial cytochrome c oxidase subunit 5B isoform 1 [Drosophila
simulans]
gi|124014114|gb|ABM88307.1| mitochondrial cytochrome c oxidase subunit 5B isoform 1 [Drosophila
simulans]
Length = 120
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 67 ATGHEREELEAELEGK-NILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG E+ EL + G N ++ GTK+ P ++ S +D RIVGC ED+ V
Sbjct: 36 ATGIEKRELLLKAAGNDNPFDMKVFKRGAGTKENPNLIPSAFDARIVGCIC--EEDQTYV 93
Query: 126 VWFWLEKGKPHECPVCSQYFVL 147
W WL+KG C C +F L
Sbjct: 94 QWMWLQKGNQKRCE-CGHWFKL 114
>gi|195471752|ref|XP_002088166.1| GE13966 [Drosophila yakuba]
gi|38048165|gb|AAR09985.1| similar to Drosophila melanogaster CG11015, partial [Drosophila
yakuba]
gi|38048331|gb|AAR10068.1| similar to Drosophila melanogaster CG11015, partial [Drosophila
yakuba]
gi|194174267|gb|EDW87878.1| GE13966 [Drosophila yakuba]
Length = 120
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 67 ATGHEREELEAELEGK-NILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG E+ EL + G N ++ GTK+ P ++ S +D RIVGC ED+ V
Sbjct: 36 ATGIEKRELLLKAAGNDNPFDMKVFKRGAGTKENPNLIPSAFDARIVGCIC--EEDQTYV 93
Query: 126 VWFWLEKGKPHECPVCSQYFVL 147
W WL+KG C C +F L
Sbjct: 94 QWMWLQKGNQKRCE-CGHWFKL 114
>gi|194862566|ref|XP_001970032.1| GG10419 [Drosophila erecta]
gi|190661899|gb|EDV59091.1| GG10419 [Drosophila erecta]
Length = 120
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 67 ATGHEREELEAELEGK-NILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG E+ EL + G N ++ GTK+ P ++ S +D RIVGC ED+ V
Sbjct: 36 ATGIEKRELLLKAAGNDNPFDMKVFKRGAGTKENPNLIPSAFDARIVGCIC--EEDQTYV 93
Query: 126 VWFWLEKGKPHECPVCSQYFVL 147
W WL+KG C C +F L
Sbjct: 94 QWMWLQKGNQKRCE-CGHWFKL 114
>gi|412988223|emb|CCO17559.1| predicted protein [Bathycoccus prasinos]
Length = 173
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 67 ATGHEREELEAELEGKNILE-IDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG R ELE GK+I + D+ P GTK++P VV S + R+VG + +D+ V
Sbjct: 86 STGLYRAELEGLASGKDIFDHYDFTRAPKGTKESPCVVTSEMEYRVVGVT--DPDDDSIV 143
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVGPGGP 155
+W LE+GK + ++FV + VG GG
Sbjct: 144 IWGRLEEGKG-PMLIGDEWFVHKRVGGGGA 172
>gi|320592394|gb|EFX04828.1| cytochrome c subunit [Grosmannia clavigera kw1407]
Length = 186
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ ++EG +I E+ GT + P +V+S D++ GC G D H+V
Sbjct: 72 ATGQERLEILGKIEGVDIFEMRPLDASRKGTVENPILVRSAGDEQYAGCT-GYPVDSHNV 130
Query: 126 VWFWLEKGKP-HECPVCSQYFVLEVVGP 152
+W + + +P C C + ++ VGP
Sbjct: 131 IWVGMSRKRPVDRCSECGSVYKMDYVGP 158
>gi|195434423|ref|XP_002065202.1| GK15323 [Drosophila willistoni]
gi|194161287|gb|EDW76188.1| GK15323 [Drosophila willistoni]
Length = 120
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 67 ATGHEREELEAELEGK-NILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG E+ EL + G N ++ GTK+ P ++ S +D RIVGC ED+ V
Sbjct: 36 ATGIEKRELLLKAAGNDNPFDMKVFKRGAGTKENPNLIPSAFDARIVGCIC--EEDQTYV 93
Query: 126 VWFWLEKGKPHECPVCSQYFVL 147
W WL+KG C C +F L
Sbjct: 94 QWMWLQKGNQKRCE-CGHWFKL 114
>gi|403415520|emb|CCM02220.1| predicted protein [Fibroporia radiculosa]
Length = 152
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER ++ E EG + ++ + GT P V S+ RI+GC G E H++
Sbjct: 59 ATGLERVQVLGEKEGVEVFDLKPLDSSRIGTLADPVKVPSFEHTRIIGCTGSPAES-HEL 117
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVG 151
+W L K CP C + L+ G
Sbjct: 118 LWMNLTNQKNRRCPECGSVYALDYQG 143
>gi|325092702|gb|EGC46012.1| cytochrome c oxidase polypeptide IV [Ajellomyces capsulatus H88]
Length = 199
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL ++ G ++ ++ + GT + P +VKS +++ GC G D H V
Sbjct: 81 ATGLERLELLGKMHGIDVFDMRPLDSSRMGTLNDPIIVKSGGNEQYAGCTGYPA-DSHSV 139
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPP 156
VW + + +P E C C +E VGP P
Sbjct: 140 VWLTVSRDRPIERCSECGNVVKMEYVGPENDP 171
>gi|28416333|gb|AAO42639.1| RH49324p, partial [Drosophila melanogaster]
Length = 154
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 67 ATGHEREELEAELEGK-NILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG E+ EL + G N ++ GTK+ P ++ S +D RIVGC ED+ V
Sbjct: 70 ATGIEKRELLLKAAGNDNPFDMKVFKRGAGTKENPNLIPSAFDARIVGCIC--EEDQTYV 127
Query: 126 VWFWLEKGKPHECPVCSQYFVL 147
W WL+KG C C +F L
Sbjct: 128 QWMWLQKGNQKRCE-CGHWFKL 148
>gi|385305223|gb|EIF49212.1| cytochrome c oxidase subunit iv [Dekkera bruxellensis AWRI1499]
Length = 149
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 59/145 (40%), Gaps = 7/145 (4%)
Query: 13 QALALAQ----YSCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVKK-RVEDVNPVA 67
Q L LA+ +S N + + + + H D GT +K V A
Sbjct: 4 QTLKLAKPTRLFSTSVIARNSAKTPKKFKTAKNLSEVHSEYDLIGTGAQKGEVPTDLEQA 63
Query: 68 TGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
TG ER EL +LEG +I E T GT P ++ SY R +GC G H V+
Sbjct: 64 TGLERLELLGKLEGVDIFEQKPLDTSRKGTMQNPILIDSYEKYRYIGCTGSPA-GSHIVM 122
Query: 127 WFWLEKGKPHECPVCSQYFVLEVVG 151
W GKP C C + + +G
Sbjct: 123 WLKPTVGKPARCWECGSVYKINYLG 147
>gi|225562763|gb|EEH11042.1| cytochrome c oxidase polypeptide IV [Ajellomyces capsulatus G186AR]
gi|240279575|gb|EER43080.1| cytochrome c oxidase polypeptide IV [Ajellomyces capsulatus H143]
Length = 199
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL ++ G ++ ++ + GT + P +VKS +++ GC G D H V
Sbjct: 81 ATGLERLELLGKMHGIDVFDMRPLDSSRMGTLNDPIIVKSGGNEQYAGCTGYPA-DSHSV 139
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPP 156
VW + + +P E C C +E VGP P
Sbjct: 140 VWLTVSRDRPIERCSECGNVVKMEYVGPENDP 171
>gi|154279822|ref|XP_001540724.1| cytochrome c oxidase polypeptide IV, mitochondrial precursor
[Ajellomyces capsulatus NAm1]
gi|150412667|gb|EDN08054.1| cytochrome c oxidase polypeptide IV, mitochondrial precursor
[Ajellomyces capsulatus NAm1]
Length = 199
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL ++ G ++ ++ + GT + P +VKS +++ GC G D H V
Sbjct: 81 ATGLERLELLGKMHGIDVFDMRPLDSSRMGTLNDPIIVKSGGNEQYAGCTGYPA-DSHSV 139
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPP 156
VW + + +P E C C +E VGP P
Sbjct: 140 VWLTVSRDRPIERCSECGNVVKMEYVGPENDP 171
>gi|213402941|ref|XP_002172243.1| cytochrome c oxidase polypeptide IV [Schizosaccharomyces japonicus
yFS275]
gi|212000290|gb|EEB05950.1| cytochrome c oxidase polypeptide IV [Schizosaccharomyces japonicus
yFS275]
Length = 165
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER E+ A++ G+++ ++ + GT P +V S R +GC G D H +
Sbjct: 56 STGLERAEMIADILGEDLFDMAPLDSSRTGTVQDPIIVPSLDPYRYIGCTGSPA-DSHPI 114
Query: 126 VWFWLEKGKPHECPVCSQYFVLE 148
VW +++GK CP C + L+
Sbjct: 115 VWMTVKEGKLRRCPTCGSVYRLQ 137
>gi|367010604|ref|XP_003679803.1| hypothetical protein TDEL_0B04630 [Torulaspora delbrueckii]
gi|359747461|emb|CCE90592.1| hypothetical protein TDEL_0B04630 [Torulaspora delbrueckii]
Length = 162
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL +LEG I + + GT + P VV+SY D R VGC G D H V
Sbjct: 70 ATGLERLELLGKLEGIEIFDQKPLDSSRKGTMENPIVVESYDDYRYVGCTGSPA-DSHSV 128
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVG 151
+W K C C + ++ VG
Sbjct: 129 MWLKPSVNKVARCWECGSVYKVKAVG 154
>gi|195053175|ref|XP_001993502.1| GH13841 [Drosophila grimshawi]
gi|193900561|gb|EDV99427.1| GH13841 [Drosophila grimshawi]
Length = 120
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 67 ATGHEREELEAELEGK-NILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG E+ EL + G N ++ GTK+ P ++ S +D RIVGC ED+ V
Sbjct: 36 ATGIEKRELLLKAAGDDNPFDMKVFKRGAGTKENPNLIPSAFDARIVGCIC--EEDQTYV 93
Query: 126 VWFWLEKGKPHECPVCSQYFVL 147
W WL+KG C C +F L
Sbjct: 94 QWMWLQKGNQKRCE-CGHWFKL 114
>gi|395332148|gb|EJF64527.1| cytochrome c oxidase polypeptide IV [Dichomitus squalens LYAD-421
SS1]
Length = 152
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER ++ +EG + ++ + GT P V S +R+VGC G E H++
Sbjct: 60 STGLERLQILGAIEGVEVFDLKPLDSSRIGTLVDPIKVFSLEPERLVGCTGSPAES-HEL 118
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVG 151
+WF L + K CP C + L+ G
Sbjct: 119 LWFNLTREKNRRCPECGSVYALDFQG 144
>gi|307168272|gb|EFN61486.1| Cytochrome c oxidase subunit 5B, mitochondrial [Camponotus
floridanus]
Length = 470
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 67 ATGHEREELEAELEG-KNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG E+ E+ A L G ++ + P TK+ P +V S ++ RI+GC ED V
Sbjct: 386 ATGLEKREMLARLAGNEDPYNLTIKRRPDSTKENPNIVYSAFESRIMGCIC--DEDALHV 443
Query: 126 VWFWLEKGKPHECPVCSQYFVL 147
W WL +G P C C +F L
Sbjct: 444 NWMWLHQGPPRRCE-CGHWFKL 464
>gi|240848562|ref|NP_001155834.1| cytochrome c oxidase subunit 5B, mitochondrial [Acyrthosiphon
pisum]
gi|239788733|dbj|BAH71033.1| ACYPI010196 [Acyrthosiphon pisum]
Length = 128
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 45 RHFSADSAGTSVKKRVEDVNPV--ATGHEREELEAELEGK----NILEIDYPTGPFGTKD 98
R F+ +A S K +P+ ATG E++E+ L G N+ I G TK+
Sbjct: 19 RMFTTSAARLSTSKDEGFPDPLDLATGIEKKEMLLRLAGNDDPYNLKSIKRGVG---TKE 75
Query: 99 APAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
P + S ++ RIVGC ED V W WL G+P C C +F L
Sbjct: 76 TPNEIPSAFEARIVGCVC--EEDSSHVKWMWLHSGEPKRC-FCGHWFKL 121
>gi|302891783|ref|XP_003044773.1| hypothetical protein NECHADRAFT_70219 [Nectria haematococca mpVI
77-13-4]
gi|256725698|gb|EEU39060.1| hypothetical protein NECHADRAFT_70219 [Nectria haematococca mpVI
77-13-4]
Length = 201
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ ++EG +I ++ GT P VV+S +++ GC G D H+V
Sbjct: 86 ATGLERLEILGKMEGVDIFDMRPLDATRLGTMAEPIVVRSAGEEQFAGCTGFPA-DSHNV 144
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVG 151
W L + +P E CP C + ++ VG
Sbjct: 145 HWLGLTRERPIERCPECGSVYKMDYVG 171
>gi|145341548|ref|XP_001415868.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576091|gb|ABO94160.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 124
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG + ELE L+G++I + + P GTK++P VV+S + R+VG P + +D+ +
Sbjct: 37 ATGLYKAELEGRLKGEDIFDHHAFLRAPTGTKESPCVVESTMEYRVVGSP--DPDDDSII 94
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVGPGG 154
W LE+G P + S++FV + V PGG
Sbjct: 95 HWGRLEEGAP-PMLIGSEWFVHKRV-PGG 121
>gi|289740249|gb|ADD18872.1| cytochrome c oxidase subunit Vb COX4 [Glossina morsitans morsitans]
Length = 120
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 67 ATGHEREELEAELEGK-NILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG E+ EL A+ G N ++ GTK+ P ++ S ++ RIVGC ED+ V
Sbjct: 36 ATGIEKRELLAKAAGNDNPFDMKVFKRGAGTKENPNLIPSAFEARIVGCIC--EEDQTYV 93
Query: 126 VWFWLEKGKPHECPVCSQYFVL 147
W WL+K P C C +F L
Sbjct: 94 QWMWLQKDSPKRCE-CGHWFKL 114
>gi|346324283|gb|EGX93880.1| subunit IV of cytochrome c oxidase [Cordyceps militaris CM01]
Length = 700
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER E+ ++EG +I ++ GT + P V+S D++ +GC G D H V
Sbjct: 584 STGLERLEILGKMEGVDIFDMRPLDASRLGTMEDPIKVRSAGDEQYLGCTGYPA-DSHVV 642
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVG 151
W + K +P E CP C + ++ VG
Sbjct: 643 TWLGISKERPIERCPECGSVYKMDYVG 669
>gi|169613320|ref|XP_001800077.1| hypothetical protein SNOG_09790 [Phaeosphaeria nodorum SN15]
gi|111061935|gb|EAT83055.1| hypothetical protein SNOG_09790 [Phaeosphaeria nodorum SN15]
Length = 239
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ +++G +I ++ GT + P VV S +++ VGC G D H+V
Sbjct: 120 ATGLERLEILGKMQGIDIFDMRPLDASRLGTPEDPIVVNSAGNEQYVGCTGFPA-DSHNV 178
Query: 126 VWFWLEKGKPH-ECPVCSQYFVLEVVGP 152
+W L + +P C C + + VGP
Sbjct: 179 LWITLTREEPQSRCMECGSTYKMHYVGP 206
>gi|301102462|ref|XP_002900318.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262102059|gb|EEY60111.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 133
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 67 ATGHEREELEAELEG-----KNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGED 121
A G ER+EL+A G ++ LE D G +KD P +V S+ D R VG D
Sbjct: 35 AVGRERQELDAAEIGVTQFNRDPLESDENQG--NSKDDPILVPSFNDVRTVGVSHN---D 89
Query: 122 EHDVVWFWLEKGKPHECPVCSQYFVL 147
+ WF +EKGK H P +YF+L
Sbjct: 90 ASYLYWFNMEKGKVHYLPEIEKYFML 115
>gi|19113954|ref|NP_593042.1| cytochrome c oxidase subunit IV (predicted) [Schizosaccharomyces
pombe 972h-]
gi|2493846|sp|P79010.1|COX4_SCHPO RecName: Full=Cytochrome c oxidase subunit 4, mitochondrial;
AltName: Full=Cytochrome c oxidase polypeptide IV;
Flags: Precursor
gi|1783179|dbj|BAA19097.1| cytochrome c oxidase subunit IV [Schizosaccharomyces pombe]
gi|4455759|emb|CAB36508.1| cytochrome c oxidase subunit IV (predicted) [Schizosaccharomyces
pombe]
Length = 164
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL +EL G++ ++ GT P +V S R +GC G H++
Sbjct: 72 ATGLERYELLSELSGRDAFDMKPLDASRKGTLTDPIMVTSLDPYRHIGCTGSP-SGSHNL 130
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVG 151
+W + K K CP C + L+ +G
Sbjct: 131 IWMTVYKDKLRRCPECGSVYKLKFMG 156
>gi|46111661|ref|XP_382888.1| hypothetical protein FG02712.1 [Gibberella zeae PH-1]
Length = 635
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER E+ ++EG +I ++ GT P +V+S +++ GC G D H V
Sbjct: 520 STGLERLEILGKMEGVDIFDMRPLDATRLGTMKDPIMVRSAGEEQFAGCTGFPA-DSHSV 578
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVG 151
W + + +P E CP C + ++ VG
Sbjct: 579 TWLGITRERPIERCPECGSVYKMDYVG 605
>gi|308799181|ref|XP_003074371.1| Cytochrome c oxidase, subunit Vb/COX4 (ISS) [Ostreococcus tauri]
gi|116000542|emb|CAL50222.1| Cytochrome c oxidase, subunit Vb/COX4 (ISS) [Ostreococcus tauri]
Length = 202
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 8/99 (8%)
Query: 49 ADSAGTSVKKRVEDVNPVATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYY 107
A ++ T V +E+ ATG +EELE +L G++I + + P GT+++P VV+S
Sbjct: 22 ARASSTGVITNLEN----ATGLYKEELEGKLRGEDIFDHHAFLRAPQGTEESPCVVESTM 77
Query: 108 DKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFV 146
+ R+VG P + +D+ + W LE+G P + S++FV
Sbjct: 78 EYRVVGSP--DPDDDSIIHWGRLEEGAPPRN-IGSEWFV 113
>gi|405962009|gb|EKC27726.1| Cytochrome c oxidase subunit 5B, mitochondrial [Crassostrea gigas]
Length = 156
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 94 FGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPG 153
FGTK+ P V S +D+R+VGC ED + +FWL KG+P C C +F L+ +
Sbjct: 82 FGTKENPVPVPSVFDRRLVGCIC--DEDTAQMQYFWLYKGEPKRC-FCGHFFQLKEISAA 138
Query: 154 GPP 156
P
Sbjct: 139 DFP 141
>gi|328352221|emb|CCA38620.1| cytochrome c oxidase subunit Vb [Komagataella pastoris CBS 7435]
Length = 311
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 67 ATGHEREELEAELEGKNIL-EIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL +LEG + E GT P ++ SY D R VGC G D H++
Sbjct: 220 ATGLERYELLGKLEGIEVFDETPLEAVRKGTMKDPILIDSYDDYRYVGCTGVPA-DSHNI 278
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVGPGGP 155
W K C C + L +G G P
Sbjct: 279 EWLKPTTEKNARCWECGSVYKLNFLGSGKP 308
>gi|409048824|gb|EKM58302.1| hypothetical protein PHACADRAFT_252515 [Phanerochaete carnosa
HHB-10118-sp]
Length = 154
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 32 ASRSLISRPLFASRHFSADSA-----GTSVKKRVEDVNPVATGHEREELEAELEGKNILE 86
A+R+ L AS H D+A + +D++ +TG ER ++ E+ G + +
Sbjct: 19 AARTFAVSTLRASEHKEIDAALFPPGAPAGTVPTDDLH--STGLERLQVLGEMHGVKVFD 76
Query: 87 ID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYF 145
D + GTK P V S+ R++GC G E H++ W L+ G+ CP C +
Sbjct: 77 YDPLDSSRIGTKKDPIKVLSWDSDRLIGCTGSPAE-SHELHWMNLKIGEHPRCPECGSVY 135
Query: 146 VLEVVG 151
L+ G
Sbjct: 136 ELDFHG 141
>gi|408394090|gb|EKJ73339.1| hypothetical protein FPSE_06496 [Fusarium pseudograminearum CS3096]
Length = 267
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER E+ ++EG +I ++ GT P +V+S +++ GC G D H V
Sbjct: 152 STGLERLEILGKMEGVDIFDMRPLDATRLGTMKDPIMVRSAGEEQFAGCTGFPA-DSHSV 210
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVG 151
W + + +P E CP C + ++ VG
Sbjct: 211 TWLGITRERPIERCPECGSVYKMDYVG 237
>gi|47216551|emb|CAG04729.1| unnamed protein product [Tetraodon nigroviridis]
Length = 70
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 95 GTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
GTK+ P +V S +KR+VGC E D +VWFWL +G CP C ++ L
Sbjct: 13 GTKEDPHIVPSIGNKRLVGCLCEE--DNTAIVWFWLHEGPSQRCPSCGSHYKL 63
>gi|164448660|ref|NP_001106742.1| cytochrome c oxidase polypeptide Vb [Bombyx mori]
gi|95102860|gb|ABF51371.1| cytochrome c oxidase polypeptide Vb [Bombyx mori]
Length = 122
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 67 ATGHEREELEAELEGKNI-LEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER+EL A G + + GT++ P +V S +D RIVGC E +
Sbjct: 38 ATGLERKELLALQAGNDDPFNMKVVKKSAGTRENPTLVPSCFDARIVGCICEEHATA--I 95
Query: 126 VWFWLEKGKPHECPVCSQYFVLE 148
W WL K +P C Y ++E
Sbjct: 96 TWLWLHKDQPRRCECGHWYKLIE 118
>gi|254568302|ref|XP_002491261.1| Subunit IV of cytochrome c oxidase [Komagataella pastoris GS115]
gi|238031058|emb|CAY68981.1| Subunit IV of cytochrome c oxidase [Komagataella pastoris GS115]
Length = 161
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 67 ATGHEREELEAELEGKNIL-EIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL +LEG + E GT P ++ SY D R VGC G D H++
Sbjct: 70 ATGLERYELLGKLEGIEVFDETPLEAVRKGTMKDPILIDSYDDYRYVGCTGVPA-DSHNI 128
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVGPGGP 155
W K C C + L +G G P
Sbjct: 129 EWLKPTTEKNARCWECGSVYKLNFLGSGKP 158
>gi|452003091|gb|EMD95548.1| hypothetical protein COCHEDRAFT_1088387 [Cochliobolus
heterostrophus C5]
Length = 211
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER E+ +++G +I ++ GT + P V S D++ VGC G D H+V
Sbjct: 90 STGLERLEILGKMQGIDIFDMRPLDASRLGTMENPITVNSAGDEQYVGCTGCPA-DSHNV 148
Query: 126 VWFWLEKGKPH-ECPVCSQYFVLEVVGPG 153
+W L + +P C C + + VGP
Sbjct: 149 LWITLTREEPKSRCMECGSVYEMHYVGPA 177
>gi|196008853|ref|XP_002114292.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190583311|gb|EDV23382.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 148
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 42 FASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEGK-NILEIDYPTGPFGTKDAP 100
+A F ++ V R+ + ATG E+ E +A + G + ++ + GP+GT P
Sbjct: 41 WAFSFFPIVASDVGVTGRIPSASEQATGKEKFEHDAMMTGNTDPFDMSFHEGPWGTAVNP 100
Query: 101 AVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
V S++D+RI+GC + +++ L+KG P +C C ++ L
Sbjct: 101 RGVPSHFDERILGCVC--EPEATQIIYMTLKKGNPQQCD-CGHWWKL 144
>gi|380028383|ref|XP_003697883.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Apis florea]
Length = 103
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 44/93 (47%), Gaps = 13/93 (13%)
Query: 66 VATGHEREELEAELEGK------NILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEG 119
+ATG E+ EL A G +EI + TKD P +V S + RIVGC E
Sbjct: 17 LATGLEKRELLAAAAGNFDPYHMKAIEISRDS----TKDCPNLVPSAFKSRIVGC-ICEP 71
Query: 120 EDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGP 152
+ H V W WL G+P C C +F L V P
Sbjct: 72 DTSH-VNWMWLHDGQPRRCE-CGHWFKLTQVAP 102
>gi|320582432|gb|EFW96649.1| Subunit IV of cytochrome c oxidase [Ogataea parapolymorpha DL-1]
Length = 154
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL +LEG + E + + GT P VV SY D R VGC G H++
Sbjct: 63 ATGLERLELLGKLEGVEVFENEPLDSSRKGTLADPIVVNSYDDYRYVGCTGSPA-GSHEI 121
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
+W K C C + L+ +G G +GH HH
Sbjct: 122 MWLKPTVEKVARCWECGSVYKLKYLGTG---EGH----HH 154
>gi|400594384|gb|EJP62228.1| cytochrome c oxidase polypeptide IV [Beauveria bassiana ARSEF 2860]
Length = 203
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER E+ ++EG ++ ++ GT + P V+S +++ +GC G D H V
Sbjct: 87 STGLERLEILGKMEGVDVFDMRPLDASRKGTMEDPIRVRSAGEEQYLGCTGYPA-DSHVV 145
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
W + K +P E CP C + ++ VG +DDHH
Sbjct: 146 TWLGISKDRPIERCPECGSVYKMDYVG--------AEDDHH 178
>gi|254586497|ref|XP_002498816.1| ZYRO0G19206p [Zygosaccharomyces rouxii]
gi|238941710|emb|CAR29883.1| ZYRO0G19206p [Zygosaccharomyces rouxii]
Length = 155
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 44/100 (44%), Gaps = 8/100 (8%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL +LEG + + GT P V++SY D R VGC G D H +
Sbjct: 63 ATGLERLELLGKLEGVEFFDTKPLDSSRKGTMADPIVLESYEDYRYVGCTGSPA-DSHTI 121
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
+W + C C + V P G P GH HH
Sbjct: 122 MWLKPTVNQVARCWECGSVY---KVNPVGVPHGH---SHH 155
>gi|342888181|gb|EGU87547.1| hypothetical protein FOXB_01929 [Fusarium oxysporum Fo5176]
Length = 201
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ ++EG +I ++ GT P +V+S +++ GC G D H+V
Sbjct: 86 ATGIERLEILGKMEGVDIFDMRPLDASRLGTMKDPIMVRSAGEEQFAGCTGFPA-DSHNV 144
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVG 151
W + + +P E CP C + ++ VG
Sbjct: 145 HWLGITRERPIERCPECGSVYKMDYVG 171
>gi|403216693|emb|CCK71189.1| hypothetical protein KNAG_0G01310 [Kazachstania naganishii CBS
8797]
Length = 161
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPF-----GTKDAPAVVKSYYDKRIVGCPGGEGED 121
ATG ER EL +LEG ++ + T P GT P +V+SY D R VGC G
Sbjct: 69 ATGLERLELLGKLEGIDVFD----TKPLDASRTGTLADPILVESYDDYRYVGCTGSPA-G 123
Query: 122 EHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGH 159
H V+W G+ C C + L VG P H
Sbjct: 124 SHTVMWLKPTVGQVARCWECGSVYKLNPVGVPDPSHSH 161
>gi|115442816|ref|XP_001218215.1| cytochrome c oxidase polypeptide IV, mitochondrial precursor
[Aspergillus terreus NIH2624]
gi|114188084|gb|EAU29784.1| cytochrome c oxidase polypeptide IV, mitochondrial precursor
[Aspergillus terreus NIH2624]
Length = 193
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL +++G +I ++ GT D P +V D++ GC G D H V
Sbjct: 73 ATGLERLELVGKMQGIDIFDMRPLDASRKGTLDNPIIVNGAGDEQYAGCTGYPA-DSHQV 131
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGP 152
VW + + +P E C C L +GP
Sbjct: 132 VWLTVSRDRPLERCGECGNVVKLNYIGP 159
>gi|410077685|ref|XP_003956424.1| hypothetical protein KAFR_0C02960 [Kazachstania africana CBS 2517]
gi|372463008|emb|CCF57289.1| hypothetical protein KAFR_0C02960 [Kazachstania africana CBS 2517]
Length = 164
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 46/104 (44%), Gaps = 15/104 (14%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPF-----GTKDAPAVVKSYYDKRIVGCPGGEGED 121
ATG ER EL +LEG +I + T P GT P +V SY D R VGC G
Sbjct: 70 ATGLERLELLGKLEGIDI----FDTKPLDSSRKGTMKDPILVDSYDDYRYVGCTGSPA-G 124
Query: 122 EHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
H V+W + C C + L VG G+D+HH
Sbjct: 125 SHTVMWLKPTVNQVARCWECGSVYKLNPVGV-----DLGEDEHH 163
>gi|310801217|gb|EFQ36110.1| cytochrome c oxidase subunit Vb [Glomerella graminicola M1.001]
Length = 188
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER E+ ++EG +I ++ GT + P V+S +++ +GC G D H
Sbjct: 71 STGLERLEILGKMEGVDIFDMRPLDASRKGTMENPIPVRSAGEEQYLGC-TGVPVDSHVT 129
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGP 152
+W + + +P E CP C + +E VGP
Sbjct: 130 IWLTISRDRPIERCPECGSVYKMEYVGP 157
>gi|170037183|ref|XP_001846439.1| cytochrome c oxidase, subunit VB [Culex quinquefasciatus]
gi|167880193|gb|EDS43576.1| cytochrome c oxidase, subunit VB [Culex quinquefasciatus]
Length = 119
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 35 SLISRPLFASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEG-KNILEID-YPTG 92
SL R + + + K + D ATG E+ EL A G + ++ + G
Sbjct: 3 SLCGRLMLNAAKRNITYTPVRFCKMMNDPIEHATGLEKRELLAHRAGDTDPFDMRVFKRG 62
Query: 93 PFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
P GTK+ P ++ S ++ R+VGC ED+ + W WL +G P C C +F L
Sbjct: 63 P-GTKENPNMIPSAFESRLVGCVC--EEDQTYIQWMWLHQGHPKRCE-CGHWFKL 113
>gi|344228896|gb|EGV60782.1| cytochrome c oxidase polypeptide IV mitochondrial precursor
[Candida tenuis ATCC 10573]
gi|344228897|gb|EGV60783.1| hypothetical protein CANTEDRAFT_116847 [Candida tenuis ATCC 10573]
Length = 158
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGP-FGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER EL ++EG ++ +++ P GT P +V +Y R VGC G +GE EH
Sbjct: 67 STGAERFELLGKMEGVDVFDMENPIFEGSGTMQDPYLVPTYVGYRYVGCMGKKGE-EHKP 125
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVG 151
W + +P C F+ + VG
Sbjct: 126 YWLKVTADEPARCWHSGVVFLAKYVG 151
>gi|195384940|ref|XP_002051170.1| GJ13709 [Drosophila virilis]
gi|194147627|gb|EDW63325.1| GJ13709 [Drosophila virilis]
Length = 158
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 49 ADSAGTSVKKRVEDVNPVATGHEREELEAELEGKN---ILEIDYPTGPFGTKDAPAVVKS 105
A S +KK + D +ATG + EL G N ++ G G ++ P V+ S
Sbjct: 56 AISTTPVLKKELTDDMELATGIFKRELMLRQAGCNDPWAMKRPMKRGA-GRENDPTVIPS 114
Query: 106 YYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
+D R+VGC + W WLEKG P C C Y+VL+ V
Sbjct: 115 AFDGRLVGC---LCLGDRAPKWMWLEKGNPKRCE-CGHYYVLKNV 155
>gi|367026444|ref|XP_003662506.1| hypothetical protein MYCTH_2303180 [Myceliophthora thermophila ATCC
42464]
gi|347009775|gb|AEO57261.1| hypothetical protein MYCTH_2303180 [Myceliophthora thermophila ATCC
42464]
Length = 184
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ ++EG ++ ++ GT + P +V+S +++ GC G D H+V
Sbjct: 70 ATGLERLEILGKMEGVDVFDMRPLDASRRGTLENPILVRSAGEEQYAGCTGFPA-DSHNV 128
Query: 126 VWFWLEKGKP-HECPVCSQYFVLEVVGP 152
+W + + +P C C + +E VGP
Sbjct: 129 LWLTMTRERPVTRCTECGNVYKMEYVGP 156
>gi|389749741|gb|EIM90912.1| COX5B-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 167
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG +R E L+G + + + + GTK P V SY+ +R +GC G D HD+
Sbjct: 61 STGLDRVESLGLLQGVEVWDQNPLDSSRIGTKKDPIKVISYFPERTIGCTGSPA-DSHDI 119
Query: 126 VWFWLEKGKPHECPVCSQYFVLE 148
W L K K C C + L+
Sbjct: 120 QWMVLNKDKIRRCHECGSVYELD 142
>gi|293332171|ref|NP_001168863.1| uncharacterized protein LOC100382668 [Zea mays]
gi|223973403|gb|ACN30889.1| unknown [Zea mays]
Length = 201
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER E+ ++EG +I ++ GT P +V+S +++ GC G D H+V
Sbjct: 86 STGIERLEILGKMEGVDIFDMRPLDASRLGTMKDPIMVRSAGEEQFAGCTGFPA-DSHNV 144
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVG 151
W + + +P E CP C + ++ VG
Sbjct: 145 HWLGITRERPIERCPECGSVYKMDYVG 171
>gi|393221420|gb|EJD06905.1| COX5B-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 195
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER +L +EG ++ ++ + GT P V + + +R++GC G D H+V
Sbjct: 69 ATGIERFQLLGRMEGVDVFDMHPLDSSRLGTMKDPIKVATMFPERLIGCTGSPA-DSHEV 127
Query: 126 VWFWLEKGKP-HECPVC 141
VW + H CP C
Sbjct: 128 VWLDANITRDRHRCPEC 144
>gi|392577384|gb|EIW70513.1| hypothetical protein TREMEDRAFT_19210, partial [Tremella
mesenterica DSM 1558]
Length = 115
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER +L +LEG ++ ++ GT ++P + S + +R VGC G D HD
Sbjct: 18 STGLERFQLLGKLEGVDVFDMKPLEMTRLGTVESPIPIYSLFPERHVGCTGYPA-DSHDT 76
Query: 126 VWFWL-EKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
+W + K K CP C + L+ G P G DHH
Sbjct: 77 LWLTVNNKRKNARCPECGCVYTLDF--KGDPALLEGGHDHH 115
>gi|367003896|ref|XP_003686681.1| hypothetical protein TPHA_0H00370 [Tetrapisispora phaffii CBS 4417]
gi|357524983|emb|CCE64247.1| hypothetical protein TPHA_0H00370 [Tetrapisispora phaffii CBS 4417]
Length = 158
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG R EL +LEG ++ + + GT P +V SY D R VGC G H
Sbjct: 65 ATGLARLELLGKLEGVDVFDSKPLESSRTGTMADPIIVNSYDDYRYVGCTGSPA-GSHTT 123
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDH 164
+W GK C C + L +G H DD H
Sbjct: 124 MWLKPSVGKVARCWECGSVYKLNPLGV------HTDDGH 156
>gi|380487776|emb|CCF37821.1| cytochrome c oxidase subunit Vb [Colletotrichum higginsianum]
Length = 180
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER E+ ++EG ++ ++ GT + P V+S +++ +GC G D H
Sbjct: 63 STGLERLEILGKMEGVDVFDMRPLDASRKGTVENPIPVRSAGEEQYLGC-TGVPVDSHVT 121
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGP 152
+W + + +P E CP C + +E VGP
Sbjct: 122 IWLTISRDRPIERCPECGSVYKMEYVGP 149
>gi|340371602|ref|XP_003384334.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Amphimedon queenslandica]
Length = 139
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 34 RSLISRP-------LFASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEG-KNIL 85
RSL+S P L R S+DS + + + + G E++E++A ++G ++
Sbjct: 11 RSLLSSPYWRRSISLAYCRKSSSDSPPGHREGNIVTDSEHSYGIEKKEIDALMDGVEDPF 70
Query: 86 EIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYF 145
++ GP GTK+ P +V S +RIVGC +D + W L KG C C +F
Sbjct: 71 NLNINRGPRGTKERPTLVPSLLGERIVGCVC--EKDATHIKWMTLPKGDAKRCH-CGHWF 127
Query: 146 VLEVVGPG 153
L P
Sbjct: 128 KLIEANPN 135
>gi|168056234|ref|XP_001780126.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668438|gb|EDQ55045.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 288
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 66 VATGHEREELEAELEGKNILEIDYPTGPFGTK-----DAPAVVKS----YYDKRIVGCPG 116
+ATG EREELE + +GK+ + P GPFGTK AV+ S +Y ++ G G
Sbjct: 221 IATGVEREELEWKRQGKSRFYLSPPRGPFGTKVRMLFTNYAVILSGECLWYQSKVTGVGG 280
Query: 117 GEGEDEH 123
G DEH
Sbjct: 281 QPGSDEH 287
>gi|195434425|ref|XP_002065203.1| GK15324 [Drosophila willistoni]
gi|194161288|gb|EDW76189.1| GK15324 [Drosophila willistoni]
Length = 151
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 54 TSVKKRVEDVNPV--ATGHEREELEAELEG-KNILEIDYPTGP-FGTKDAPAVVKSYYDK 109
T+ ++ E +P+ ATG E+ EL + G + + P G ++ P V+ S +D
Sbjct: 52 TTPVRKAEMADPLEHATGIEKRELLLKAAGCADPWAMRKPLRRGSGRENDPTVIPSAFDG 111
Query: 110 RIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGP 152
R+VGC + W WLEKG P C C +FVL+ V P
Sbjct: 112 RLVGC---ICLGDRFAKWMWLEKGAPKRCE-CGHFFVLKNVPP 150
>gi|396460270|ref|XP_003834747.1| similar to cytochrome c oxidase polypeptide IV [Leptosphaeria
maculans JN3]
gi|312211297|emb|CBX91382.1| similar to cytochrome c oxidase polypeptide IV [Leptosphaeria
maculans JN3]
Length = 201
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ +++G +I ++ GT P +V S +++ VGC G D H+V
Sbjct: 82 ATGLERLEILGKMQGVDIFDMRPLDASRVGTMADPIIVNSAGNEQYVGCTGCPA-DSHNV 140
Query: 126 VWFWLEKGKPH-ECPVCSQYFVLEVVGP 152
+W L + +P C C + + VGP
Sbjct: 141 LWITLTRDEPKSRCMECGSVYEMHYVGP 168
>gi|383850220|ref|XP_003700694.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Megachile rotundata]
Length = 126
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 36 LISRPLFAS--RHFSADSAGTSVK--KRVEDVNPV--ATGHEREELEAELEGK------N 83
L R +F + R FS ++ + K + E +PV ATG E+ EL A G
Sbjct: 4 LCGRAVFQTCRRSFSRNAVIYAQKSGEEAELPDPVDHATGLEKRELLAAAAGNYDPYHMK 63
Query: 84 ILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQ 143
+EI + TKD+P ++ S + RIVGC D V W WL +G+P C C
Sbjct: 64 AIEISRDS----TKDSPNLIPSAFTSRIVGCIC--EPDSSHVNWMWLHEGQPRRCE-CGH 116
Query: 144 YFVL 147
+F L
Sbjct: 117 WFKL 120
>gi|307108887|gb|EFN57126.1| hypothetical protein CHLNCDRAFT_57351 [Chlorella variabilis]
Length = 139
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 22 CRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEG 81
CR P + + L ++P A A T K+ V + T EREELEA+ G
Sbjct: 5 CRLFPAL-TRGTSLLGAQPQAAWNVAKAFGYATHSKEEVAEFLEQTTVPEREELEAKAHG 63
Query: 82 -KNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPV 140
+N + PFGT++ P VV S + +RIVG + +D+ V W +E G+P + +
Sbjct: 64 IENPWHEAWLDAPFGTEENPVVVPSEFAERIVGV--SDPDDDSLVWWGIIEDGQPPKQII 121
Query: 141 -CSQYFVLE 148
++FVL+
Sbjct: 122 EGGEFFVLK 130
>gi|50293263|ref|XP_449043.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528356|emb|CAG62013.1| unnamed protein product [Candida glabrata]
Length = 154
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 45/104 (43%), Gaps = 16/104 (15%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPF-----GTKDAPAVVKSYYDKRIVGCPGGEGED 121
ATG R EL +LEG ++ + T P GT P VV SY D R VGC G
Sbjct: 62 ATGLARLELLGKLEGIDVFD----TKPLDASRKGTMQDPIVVDSYDDYRYVGCTGSPA-G 116
Query: 122 EHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
H ++W + C C + L P G P+ H DHH
Sbjct: 117 SHTIMWLKPTVNQVARCWECGSVYKLN---PVGVPNEH---DHH 154
>gi|344302957|gb|EGW33231.1| hypothetical protein SPAPADRAFT_60565 [Spathaspora passalidarum
NRRL Y-27907]
Length = 161
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGP-FGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG +R EL + EG ++ +++ P GT + P +V +Y+ R VGC G D H
Sbjct: 70 STGIQRFELLGKREGVDVFDMENPIYEGKGTFEEPFLVPTYFGYRYVGCKGTHQHD-HKP 128
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVG 151
W +E GK C C + +G
Sbjct: 129 YWMKVEDGKKSRCWQCGTVLTAKYLG 154
>gi|32815857|gb|AAP88307.1| cytochrome c oxidase polypeptide Vb [Drosophila simulans]
Length = 87
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 67 ATGHEREELEAELEGK-NILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG E+ EL + G N ++ GTK+ P ++ S +D RIVGC ED+ V
Sbjct: 19 ATGIEKRELLLKAAGNDNPFDMKVFKRGAGTKENPNLIPSAFDARIVGCIC--EEDQXXV 76
Query: 126 VWFWLEKG 133
W WL+KG
Sbjct: 77 QWMWLQKG 84
>gi|451856418|gb|EMD69709.1| hypothetical protein COCSADRAFT_75843, partial [Cochliobolus
sativus ND90Pr]
Length = 226
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER E+ +++G +I ++ GT + P V S D++ VGC G D H+V
Sbjct: 105 STGLERLEILGKMQGIDIFDMRPLDASRVGTMENPITVNSAGDEQYVGCTGCPA-DSHNV 163
Query: 126 VWFWLEKGKPH-ECPVCSQYFVLEVVGPGGPP 156
+W L + +P C C + + VGP
Sbjct: 164 LWITLTREEPKSRCMECGSVYEMHYVGPAEDA 195
>gi|331239919|ref|XP_003332611.1| cytochrome c oxidase subunit Vb [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309311601|gb|EFP88192.1| cytochrome c oxidase subunit Vb [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 191
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER E+ + +EG + + GT D P V S RIVGC G D HD
Sbjct: 66 STGIERYEILSRMEGHDPFDRKPLAVNHMGTLDNPVKVFSLERTRIVGCTGFP-VDSHDT 124
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDD 163
++ + +P C C +V++ G P HG+++
Sbjct: 125 LYMKVSSSRPRRCSECGCAYVVDFQ---GDPHEHGNEE 159
>gi|365983424|ref|XP_003668545.1| hypothetical protein NDAI_0B02670 [Naumovozyma dairenensis CBS 421]
gi|343767312|emb|CCD23302.1| hypothetical protein NDAI_0B02670 [Naumovozyma dairenensis CBS 421]
Length = 169
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 40/98 (40%), Gaps = 10/98 (10%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGPF-----GTKDAPAVVKSYYDKRIVGCPGGEGED 121
ATG ER EL +LEG + T P GT P ++ SY D R VGC G
Sbjct: 77 ATGLERLELLGKLEGIEFFD----TKPLDASRKGTMKDPIIINSYDDYRYVGCTGSPA-G 131
Query: 122 EHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGH 159
H ++W K C C + L VG P H
Sbjct: 132 SHTIMWLKPTVEKVARCWECGSVYKLNPVGVPDPDHSH 169
>gi|32815893|gb|AAP88320.1| cytochrome c oxidase polypeptide Vb [Drosophila mauritiana]
Length = 87
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 58 KRVEDVNPVATGHEREELEAELEGK-NILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPG 116
K + D ATG E+ EL + G N ++ GTK+ P ++ S +D RIVGC
Sbjct: 10 KMMNDXLEHATGIEKRELLLKAAGNDNPFDMKVFKRGAGTKENPNLIPSAFDARIVGCIC 69
Query: 117 GEGEDEHDVVWFWLEKG 133
ED+ V W WL+KG
Sbjct: 70 --EEDQTYVQWMWLQKG 84
>gi|195118824|ref|XP_002003936.1| GI20357 [Drosophila mojavensis]
gi|193914511|gb|EDW13378.1| GI20357 [Drosophila mojavensis]
Length = 160
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 95 GTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
G ++ P V S +D RIVGC + W WLEKG P C C YFVL+ V
Sbjct: 106 GRENDPTEVPSAFDGRIVGCIC---LGDRSAKWMWLEKGAPKRCE-CGHYFVLKNV 157
>gi|357605467|gb|EHJ64642.1| cytochrome c oxidase, subunit VB [Danaus plexippus]
Length = 123
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 52 AGTSVKKRVEDVNPVATGHEREELEAELEGK----NILEIDYPTGPFGTKDAPAVVKSYY 107
AG+ + R D TG E+ EL A + G+ I+ I GP GT + P ++ S +
Sbjct: 24 AGSRICSRFHDTLDQLTGIEKRELLAHMAGECDPFRIMAIK--KGP-GTWERPNLIPSAF 80
Query: 108 DKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGP 152
KR+VGC D + + + W+ G+P C C +F L + P
Sbjct: 81 RKRLVGCVC--YPDTNHIEYMWIHLGEPKRCG-CGYWFELCPIAP 122
>gi|225713554|gb|ACO12623.1| Cytochrome c oxidase subunit 5B, mitochondrial precursor
[Lepeophtheirus salmonis]
gi|225714346|gb|ACO13019.1| Cytochrome c oxidase subunit 5B, mitochondrial precursor
[Lepeophtheirus salmonis]
gi|290462457|gb|ADD24276.1| Cytochrome c oxidase subunit 5B, mitochondrial [Lepeophtheirus
salmonis]
gi|290561144|gb|ADD37974.1| Cytochrome c oxidase subunit 5B, mitochondrial [Lepeophtheirus
salmonis]
Length = 129
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Query: 35 SLISR---PLFASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEGKN---ILEID 88
SLI++ L R FS TS + D ATG E+ E+ A G + L
Sbjct: 3 SLIAKNALSLAGKRSFSVSCVATSKGSNMSDPKFHATGLEKYEILAAEAGNDDPFFLRAK 62
Query: 89 YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLE 148
+ TK+ P +V + + R+VGC E + ++ W WL + KP C C +F L+
Sbjct: 63 HIVK--ATKEEPHIVDALDEYRMVGCLCNEHDT--NIKWMWLFENKPKRCR-CGHWFKLK 117
>gi|452821407|gb|EME28438.1| cytochrome c oxidase (Complex IV) subunit Vb [Galdieria
sulphuraria]
Length = 158
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%)
Query: 94 FGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
FGT + P V + D R VGC G +H + W + K +CP+C Q F L
Sbjct: 98 FGTSERPRKVPTMGDSRFVGCTGHSAPKDHSIWWLHVTKETNVKCPLCGQVFQL 151
>gi|195053177|ref|XP_001993503.1| GH13842 [Drosophila grimshawi]
gi|193900562|gb|EDV99428.1| GH13842 [Drosophila grimshawi]
Length = 157
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 54 TSVKKRVEDVNPVATGHEREELEAELEGKN---ILEIDYPTGPFGTKDAPAVVKSYYDKR 110
TSV + D +ATG + EL G ++ G G + P V+ S +D R
Sbjct: 60 TSVSSELTDDMELATGIFKRELMLRQGGCTDPWAMKRPLKRGA-GLEKDPTVIPSAFDGR 118
Query: 111 IVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
+VGC + W WLEKG+P C C YFVL+ V
Sbjct: 119 LVGCLC---LGDRVPKWMWLEKGEPKRCE-CGHYFVLKNV 154
>gi|345565594|gb|EGX48543.1| hypothetical protein AOL_s00080g172 [Arthrobotrys oligospora ATCC
24927]
Length = 192
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ ++EG ++ + GT + P + S ++ VGC G D H
Sbjct: 81 ATGLERLEILGKMEGIDVFNMKPLDASRLGTMEDPIIALSAGEEHYVGCTGFPA-DSHVT 139
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPPDGHGD 161
+W L + +P E C C +E + G D H D
Sbjct: 140 MWLTLSRSRPIERCTECGNVIKMEYI---GAEDAHSD 173
>gi|406607156|emb|CCH41417.1| Cytochrome c oxidase polypeptide 4,mitochondrial [Wickerhamomyces
ciferrii]
Length = 157
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL +LEG + + + GT P +V+SY D R VGC G D H +
Sbjct: 66 ATGLERLELLGKLEGIEVFDTKPLDSSRRGTMADPILVESYDDYRYVGCTGSPA-DSHVI 124
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
W C C + L+ P G DDHH
Sbjct: 125 EWLKPTVESVARCWECGSVYKLK-------PVGVPHDDHH 157
>gi|406696587|gb|EKC99869.1| cytochrome c oxidase polypeptide iv [Trichosporon asahii var.
asahii CBS 8904]
Length = 154
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL +++G ++ ++ GT P V SYY R VGC G D HD
Sbjct: 60 ATGIERFELMGKVQGVDVFDMKPLEADRIGTLADPIEVLSYYPVRQVGCTGFPA-DSHDT 118
Query: 126 VWFWLEKGKPH-ECPVCSQYFVLE 148
+W + K H C C + L+
Sbjct: 119 LWIDVTAEKKHARCTECGSVYTLK 142
>gi|401881571|gb|EJT45869.1| cytochrome c oxidase polypeptide iv, precursor [Trichosporon asahii
var. asahii CBS 2479]
Length = 185
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL +++G ++ ++ GT P V SYY R VGC G D HD
Sbjct: 91 ATGIERFELMGKVQGVDVFDMKPLEADRIGTLADPIEVLSYYPVRQVGCTGFPA-DSHDT 149
Query: 126 VWFWLEKGKPH-ECPVCSQYFVLE 148
+W + K H C C + L+
Sbjct: 150 LWIDVTAEKKHARCTECGSVYTLK 173
>gi|444319170|ref|XP_004180242.1| hypothetical protein TBLA_0D02180 [Tetrapisispora blattae CBS 6284]
gi|387513284|emb|CCH60723.1| hypothetical protein TBLA_0D02180 [Tetrapisispora blattae CBS 6284]
Length = 177
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 2/94 (2%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL ++EG + GT P +V SY + R VGC G H+
Sbjct: 85 ATGMERLELMGKMEGVEFFDTKPLQANRIGTMADPIIVDSYDEYRYVGCSGCPA-GTHET 143
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGH 159
+W + C C F L +G D H
Sbjct: 144 MWLKPTINQVARCWECGSVFKLNYIGVKTEEDHH 177
>gi|389609089|dbj|BAM18156.1| cytochrome c oxidase, subunit VB [Papilio xuthus]
Length = 122
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 13/118 (11%)
Query: 32 ASRSLISRPLFASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEGKNI-LEIDYP 90
A R+LI L +R AD K + D ATG E++EL A G + +
Sbjct: 13 ACRNLI---LSTARRGYAD-------KMMADPMEHATGLEKKELLALQAGNDDPFNMKML 62
Query: 91 TGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLE 148
GT++ P +V S +D RIVGC E + W W+ K P C Y ++E
Sbjct: 63 KKAAGTREDPTLVPSCFDARIVGCICEEHSTA--INWLWVHKDHPRRCECGHWYKLIE 118
>gi|225708992|gb|ACO10342.1| Cytochrome c oxidase subunit 5B, mitochondrial precursor [Caligus
rogercresseyi]
Length = 135
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 30 SIASRSLISRPLFASRHFSADSAGTSVKK----RVEDVNPVATGHEREELEAELEGKN-- 83
++ +RS +S L R FS +S K ++ D ATG E+ EL A G +
Sbjct: 3 NLIARSALS--LAGRRSFSVSCVASSKDKGKGTKMSDPTFHATGLEKYELLAAEAGNDNP 60
Query: 84 --ILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVC 141
I +G + P ++ S RIVGC D +VVWF L +G+P +C C
Sbjct: 61 FDTYLIRPESGMGDSSKMPILIPSLESSRIVGCSCES--DYKEVVWFNLPEGEPQQCD-C 117
Query: 142 SQYFVL 147
YF L
Sbjct: 118 GVYFKL 123
>gi|50306625|ref|XP_453286.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642420|emb|CAH00382.1| KLLA0D05082p [Kluyveromyces lactis]
Length = 154
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG R EL +LEG + + + GT + P +V+SY D R VG G H+V
Sbjct: 63 ATGLARLELLGKLEGIEVFDTKPLDSSRIGTMENPIIVESYDDYRYVGATGSPA-GSHNV 121
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGH 159
+W G+ C + L++VG P +GH
Sbjct: 122 MWLKPTDGQVARCWETGCVYKLKMVGV--PQEGH 153
>gi|32815855|gb|AAP88306.1| cytochrome c oxidase polypeptide Vb [Drosophila simulans]
Length = 87
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 67 ATGHEREELEAELEGK-NILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG E+ EL + G N ++ GTK+ P ++ S +D RIVGC ED+ V
Sbjct: 19 ATGIEKRELLFKAAGNDNPFDMKVFKRGAGTKENPNLIPSAFDARIVGCIC--EEDQTYV 76
Query: 126 VWFWLEKG 133
W WL+KG
Sbjct: 77 QWMWLQKG 84
>gi|389611261|dbj|BAM19242.1| cytochrome c oxidase, subunit VB [Papilio polytes]
Length = 122
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 58 KRVEDVNPVATGHEREELEAELEGKNI-LEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPG 116
K + D ATG E++EL A G + + GT+ P +V S +D RIVGC
Sbjct: 29 KMMSDPMEHATGLEKKELLALQAGNDDPFNMKMLKKAAGTRQDPTLVPSCFDARIVGCIC 88
Query: 117 GEGEDEHDVVWFWLEKGKPHECPVCSQYFVLE 148
E + W W+ K P C Y ++E
Sbjct: 89 EEHSTA--INWLWVHKDHPRRCECGHWYKLIE 118
>gi|145522920|ref|XP_001447302.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124414806|emb|CAK79905.1| unnamed protein product [Paramecium tetraurelia]
Length = 180
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 91 TGPFGTKDAPAVVKSYYDK--RIVGCPGGEGED---EHDVVWFWLEKGKPHECPVCSQYF 145
T FGT D P V+ + D R VGC G + ED +H++ F L +G CP+C Q F
Sbjct: 85 TVNFGTVDNPCVIFTA-DTPFRYVGCTGLQNEDDYEQHEIHLFMLREGPLQRCPMCGQVF 143
Query: 146 VL 147
L
Sbjct: 144 KL 145
>gi|325190058|emb|CCA24540.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325191185|emb|CCA25971.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 134
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 60 VEDVNPVATGHEREELEAELEG-----KNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGC 114
+ D+ A G +REEL+ E G ++ +E D G +K+ P +V S+ + R +G
Sbjct: 27 IPDIYDHAVGRQREELDDEKAGIVTFNRDPIETDETQG--NSKEDPILVPSFNEVRPIGV 84
Query: 115 PGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
D V WF L+KGK P +YF L
Sbjct: 85 SHN---DSSYVFWFNLQKGKTFYVPAIEKYFKL 114
>gi|125987065|ref|XP_001357295.1| GA10724 [Drosophila pseudoobscura pseudoobscura]
gi|195156139|ref|XP_002018958.1| GL25677 [Drosophila persimilis]
gi|198477061|ref|XP_002136781.1| GA28178 [Drosophila pseudoobscura pseudoobscura]
gi|54645626|gb|EAL34364.1| GA10724 [Drosophila pseudoobscura pseudoobscura]
gi|194115111|gb|EDW37154.1| GL25677 [Drosophila persimilis]
gi|198145100|gb|EDY71804.1| GA28178 [Drosophila pseudoobscura pseudoobscura]
Length = 151
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 16/111 (14%)
Query: 49 ADSAGTSVKKRVEDVNPVATGHEREELEAELEG-------KNILEIDYPTGPFGTKDAPA 101
A S +K + D +ATG + E++ + +G IL+ G + P
Sbjct: 49 AISTTPVLKAEMADDMELATGIAKREMQLKEQGCGDPWGLGKILKRGS-----GRLNDPT 103
Query: 102 VVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGP 152
+ S +D R+VGC D+ W WLE+G P C C YFVL+ V P
Sbjct: 104 EIPSAFDGRLVGCLC---LDDRFAKWMWLEEGPPKRCE-CGHYFVLKKVPP 150
>gi|189209369|ref|XP_001941017.1| cytochrome c oxidase polypeptide IV, mitochondrial precursor
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977110|gb|EDU43736.1| cytochrome c oxidase polypeptide IV, mitochondrial precursor
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 229
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 17/115 (14%)
Query: 67 ATGHEREELEAELEGKNILEI---------------DYPTGPFGTKDAPAVVKSYYDKRI 111
ATG ER E+ +++G +I ++ D P + D++
Sbjct: 92 ATGLERLEILGKMQGIDIFDMRPLDASRLGTWSRIADGGDNQLAHHGRPNYRHAAGDEQY 151
Query: 112 VGCPGGEGEDEHDVVWFWLEKGKPH-ECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
VGC G D H+V+W L + +P C C + + VGP GH DHH
Sbjct: 152 VGCTGFPA-DSHNVLWITLTRDEPKSRCMECGSVYEMHYVGPQEDAHGHSHSDHH 205
>gi|256269378|gb|EEU04676.1| Cox4p [Saccharomyces cerevisiae JAY291]
Length = 155
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 44/103 (42%), Gaps = 17/103 (16%)
Query: 68 TGHEREELEAELEGKNILEIDYPTGPF-----GTKDAPAVVKSYYDKRIVGCPGGEGEDE 122
TG R EL +LEG ++ + T P GT P +++SY D R VGC G
Sbjct: 64 TGLARLELLGKLEGIDVFD----TKPLDSSRKGTMKDPIIIESYDDYRYVGCTGSPA-GS 118
Query: 123 HDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
H ++W + C C + L P G +DDHH
Sbjct: 119 HTIMWLKPTVNEVARCWECGSVYKLN-------PVGVPNDDHH 154
>gi|6321251|ref|NP_011328.1| cytochrome c oxidase subunit IV [Saccharomyces cerevisiae S288c]
gi|117090|sp|P04037.1|COX4_YEAST RecName: Full=Cytochrome c oxidase subunit 4, mitochondrial;
AltName: Full=Cytochrome c oxidase polypeptide IV;
Flags: Precursor
gi|3582|emb|CAA25665.1| cytochrome c oxidase subunit IV precursor [Saccharomyces
cerevisiae]
gi|1143560|emb|CAA62787.1| cytochrome C oxidase chain IV precursor [Saccharomyces cerevisiae]
gi|1322805|emb|CAA96899.1| COX4 [Saccharomyces cerevisiae]
gi|151943629|gb|EDN61939.1| cytochrome c oxidase subunit IV [Saccharomyces cerevisiae YJM789]
gi|190407127|gb|EDV10394.1| cytochrome c oxidase subunit IV [Saccharomyces cerevisiae RM11-1a]
gi|259146324|emb|CAY79581.1| Cox4p [Saccharomyces cerevisiae EC1118]
gi|285812028|tpg|DAA07928.1| TPA: cytochrome c oxidase subunit IV [Saccharomyces cerevisiae
S288c]
gi|323304962|gb|EGA58716.1| Cox4p [Saccharomyces cerevisiae FostersB]
gi|323333622|gb|EGA75015.1| Cox4p [Saccharomyces cerevisiae AWRI796]
gi|323337533|gb|EGA78778.1| Cox4p [Saccharomyces cerevisiae Vin13]
gi|323348678|gb|EGA82920.1| Cox4p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355048|gb|EGA86878.1| Cox4p [Saccharomyces cerevisiae VL3]
gi|349578046|dbj|GAA23212.1| K7_Cox4p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765765|gb|EHN07271.1| Cox4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299563|gb|EIW10657.1| Cox4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 155
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 44/103 (42%), Gaps = 17/103 (16%)
Query: 68 TGHEREELEAELEGKNILEIDYPTGPF-----GTKDAPAVVKSYYDKRIVGCPGGEGEDE 122
TG R EL +LEG ++ + T P GT P +++SY D R VGC G
Sbjct: 64 TGLARLELLGKLEGIDVFD----TKPLDSSRKGTMKDPIIIESYDDYRYVGCTGSPA-GS 118
Query: 123 HDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
H ++W + C C + L P G +DDHH
Sbjct: 119 HTIMWLKPTVNEVARCWECGSVYKLN-------PVGVPNDDHH 154
>gi|391343708|ref|XP_003746148.1| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like
[Metaseiulus occidentalis]
Length = 117
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 57 KKRVEDVNPVATGHEREELEAELEGKNILEIDYP--TGPFGTKDAPAVVKSYYDKRIVGC 114
++++ D ATG E+ ELEA G N+ D GTKD P +V S +KR+VGC
Sbjct: 25 ERKIHDHFEHATGKEKYELEAIRSG-NLDPFDEAPRKRGVGTKDQPNLVPSIKEKRLVGC 83
Query: 115 PGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVL 147
ED + + W+ KG+ C +C +F L
Sbjct: 84 IC--EEDAVVINYMWVHKGELRRC-MCGHWFKL 113
>gi|67536710|ref|XP_662129.1| hypothetical protein AN4525.2 [Aspergillus nidulans FGSC A4]
gi|40741678|gb|EAA60868.1| hypothetical protein AN4525.2 [Aspergillus nidulans FGSC A4]
gi|259482647|tpe|CBF77328.1| TPA: cytochrome c subunit Vb, putative (AFU_orthologue;
AFUA_2G03010) [Aspergillus nidulans FGSC A4]
Length = 194
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL +++G +I ++ GT D P +V D++ GC G D H V
Sbjct: 73 ATGLERLELIGKMQGIDIFDMRPLDASRKGTLDNPIIVNGAGDEQYAGCTGYPA-DSHHV 131
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGP 152
W + + +P E C C L +GP
Sbjct: 132 NWLTVSRERPIERCLECGNVVKLNYIGP 159
>gi|145475489|ref|XP_001423767.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124390828|emb|CAK56369.1| unnamed protein product [Paramecium tetraurelia]
Length = 710
Score = 42.7 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 94 FGTKDAPAVVKSYYDK-RIVGCPGGEGED---EHDVVWFWLEKGKPHECPVCSQYFVL 147
FGT D P V+ + R VGC G + ED +H++ F L +G CP+C Q F L
Sbjct: 88 FGTVDNPCVIFTADTPFRYVGCTGLQNEDDYEQHEIHLFMLREGPLQRCPMCGQVFKL 145
>gi|225709030|gb|ACO10361.1| Cytochrome c oxidase subunit 5B, mitochondrial precursor [Caligus
rogercresseyi]
Length = 131
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 30 SIASRSLISRPLFASRHFSADSAGTSVKKRVEDVNPV--ATGHEREELEAELEGKN---I 84
++ +RS +S L R FS + K + +P ATG E+ EL A G +
Sbjct: 3 NLIARSALS--LAGRRSFSVSCVASCKGKGTKMSDPTFHATGLEKYELLAAEAGNDDPFF 60
Query: 85 LEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQY 144
L T G+K+ P VV + + R+VGC E + ++ W WL + KP C C +
Sbjct: 61 LRAKKITK--GSKEEPHVVDALDEFRMVGCVC--NEHDTNIKWMWLFENKPKRCR-CGYW 115
Query: 145 FVLE 148
F L+
Sbjct: 116 FKLK 119
>gi|145527342|ref|XP_001449471.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417059|emb|CAK82074.1| unnamed protein product [Paramecium tetraurelia]
Length = 2436
Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 94 FGTKDAPAVVKSYYDK-RIVGCPGGEGED---EHDVVWFWLEKGKPHECPVCSQYFVL 147
FGT D P V+ + R VGC G + ED +H++ F L +G CP+C Q F L
Sbjct: 1882 FGTVDNPCVIFTADTPFRYVGCTGLQNEDDYEQHEIHLFMLREGPLQRCPMCGQVFKL 1939
>gi|145533266|ref|XP_001452383.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420071|emb|CAK84986.1| unnamed protein product [Paramecium tetraurelia]
Length = 626
Score = 42.4 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 94 FGTKDAPAVVKSYYDK-RIVGCPGGEGED---EHDVVWFWLEKGKPHECPVCSQYFVL 147
FGT D P V+ + R VGC G + ED +H++ F L +G CP+C Q F L
Sbjct: 88 FGTVDNPCVIFTADTPFRYVGCTGLQNEDDYEQHEIHLFMLREGPLQRCPMCGQVFKL 145
>gi|145497539|ref|XP_001434758.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401886|emb|CAK67361.1| unnamed protein product [Paramecium tetraurelia]
Length = 663
Score = 42.4 bits (98), Expect = 0.073, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 94 FGTKDAPAVVKSYYDK-RIVGCPGGEGED---EHDVVWFWLEKGKPHECPVCSQYFVL 147
FGT D P V+ + R VGC G + ED +H++ F L +G CP+C Q F L
Sbjct: 102 FGTVDNPCVIFTADTPFRYVGCTGLQNEDDYEQHEIHLFMLREGPLQRCPMCGQVFKL 159
>gi|225680479|gb|EEH18763.1| cytochrome c oxidase polypeptide IV [Paracoccidioides brasiliensis
Pb03]
Length = 170
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 95 GTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHE-CPVCSQYFVLEVVGPG 153
GT D P +VKS D++ GC G D H V+W + + +P E C C +E +GP
Sbjct: 81 GTLDNPIIVKSGGDEQYAGCTGFPA-DSHTVIWLTVSRKRPIERCSECGNVVKMEYIGPE 139
Query: 154 GPP 156
P
Sbjct: 140 SDP 142
>gi|194761484|ref|XP_001962959.1| GF14171 [Drosophila ananassae]
gi|190616656|gb|EDV32180.1| GF14171 [Drosophila ananassae]
Length = 155
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 24/111 (21%)
Query: 54 TSVKKRVE-DVNPVATGHEREELEAELEGKNILEIDYPTGPFGT----------KDAPAV 102
T V+K V D + + TG ++ EL+ +G T P+G ++ P V
Sbjct: 56 TQVQKSVLIDDDELVTGIQKRELQLAKQG--------CTDPWGVGKIIRRGSGRENDPTV 107
Query: 103 VKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGK-PHECPVCSQYFVLEVVGP 152
+ S +D R+VGC D+ W W+EK + P C C YFVL+ V P
Sbjct: 108 LPSAFDYRLVGC---LCLDDRFAKWMWIEKDEGPKRCE-CGHYFVLKNVSP 154
>gi|296419446|ref|XP_002839319.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635447|emb|CAZ83510.1| unnamed protein product [Tuber melanosporum]
Length = 95
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 95 GTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHE-CPVCSQYFVLEVVG 151
GT D P VV+S +R +GC G D H+ +W + K +P E CP C + +E G
Sbjct: 10 GTLDNPIVVRSLGKERYLGCTGYPA-DSHNTIWLTVSKDRPVERCPECGGVYKMEYAG 66
>gi|361130793|gb|EHL02530.1| putative Cytochrome c oxidase subunit 4, mitochondrial [Glarea
lozoyensis 74030]
Length = 138
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ +++G +I ++ GT D P +VKS+ D++ GC G D H
Sbjct: 34 ATGLERLEILGKMQGVDIFDMKPLDASRKGTLDNPIIVKSFGDEQYAGCTGYPA-DSHVT 92
Query: 126 VWFWLEKGKPHECP 139
+W ++ P + P
Sbjct: 93 IWLTMDYVGPQDDP 106
>gi|401839296|gb|EJT42579.1| COX4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 155
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 17/103 (16%)
Query: 68 TGHEREELEAELEGKNILEIDYPTGPF-----GTKDAPAVVKSYYDKRIVGCPGGEGEDE 122
TG R EL +LEG ++ + T P GT P +++SY D R VGC G
Sbjct: 64 TGLARLELLGKLEGIDVFD----TKPLDSSRKGTMKDPIIIESYDDYRYVGCTGSPA-GS 118
Query: 123 HDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
H ++W + C C + L P G DDHH
Sbjct: 119 HTIMWLKPTVNEVARCWECGSVYKLN-------PVGVPSDDHH 154
>gi|303288608|ref|XP_003063592.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454660|gb|EEH51965.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 146
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 67 ATGHEREELEAELEGKNILE-IDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG E EL+A EGK+ + D+ P GT++ P VKS RIVG + +D+ V
Sbjct: 61 ATGLELRELQAAAEGKDFFDHYDFLQAPNGTEEKPVEVKSSMPYRIVGAT--DPDDDCIV 118
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVV 150
W +E+G P + ++FV + V
Sbjct: 119 HWGRVERGGP-PVKIGYEWFVHKSV 142
>gi|401625816|gb|EJS43806.1| cox4p [Saccharomyces arboricola H-6]
Length = 155
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 42/103 (40%), Gaps = 17/103 (16%)
Query: 68 TGHEREELEAELEGKNILEIDYPTGPF-----GTKDAPAVVKSYYDKRIVGCPGGEGEDE 122
TG R EL +LEG ++ + T P GT P +++SY D R VGC G
Sbjct: 64 TGLARLELLGKLEGIDVFD----TKPLDSSRKGTMKDPIIIESYDDYRYVGCTGSPA-GS 118
Query: 123 HDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
H ++W C C + L P G DDHH
Sbjct: 119 HTIMWLKPTVNDVARCWECGSVYKLN-------PVGVPSDDHH 154
>gi|328859130|gb|EGG08240.1| hypothetical protein MELLADRAFT_74577 [Melampsora larici-populina
98AG31]
Length = 196
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 67 ATGHEREELEAELEGKNILEIDYPTGP-FGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER E+ A +EG + P GT P V S RIVGC G D HD
Sbjct: 74 ATGIERYEILARMEGLEPFDNKPLAVPHMGTLADPVKVFSLERTRIVGCTGFP-VDSHDT 132
Query: 126 VWFWLEKGKPHECPVCSQYFVLEVVG 151
++ + +P C C +V++ G
Sbjct: 133 IYMKVSDSRPRRCGECGCAYVIDYHG 158
>gi|308494136|ref|XP_003109257.1| CRE-CCO-1 protein [Caenorhabditis remanei]
gi|308246670|gb|EFO90622.1| CRE-CCO-1 protein [Caenorhabditis remanei]
gi|341886835|gb|EGT42770.1| hypothetical protein CAEBREN_12755 [Caenorhabditis brenneri]
gi|341898165|gb|EGT54100.1| CBN-CCO-1 protein [Caenorhabditis brenneri]
Length = 132
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG E++ L A L G + E Y TK P +V S+YD RI+GC +D V
Sbjct: 46 ATGREKKMLLARLAGDDRYEPKVYYRAEASTKQKPNLVPSHYDFRIIGCMC--EQDSGHV 103
Query: 126 VWFWLEKGKPHECPVCSQYF 145
+ + KG+P C C +F
Sbjct: 104 NFMTIAKGEPKRCE-CGHWF 122
>gi|328794521|ref|XP_001121646.2| PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like,
partial [Apis mellifera]
Length = 80
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
Query: 66 VATGHEREELEAELEGK------NILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEG 119
+ATG E+ EL A G +EI + TKD P +V S + RIVGC E
Sbjct: 7 LATGLEKRELLAAAAGNFDPYHMKAIEISRDS----TKDCPNLVPSAFKSRIVGC-ICEP 61
Query: 120 EDEHDVVWFWLEKGKPHEC 138
+ H V W WL G+P C
Sbjct: 62 DTSH-VNWMWLHDGQPRRC 79
>gi|268564819|ref|XP_002639238.1| C. briggsae CBR-CCO-1 protein [Caenorhabditis briggsae]
Length = 132
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG E++ L A L G + E Y TK P +V S+YD RI+GC +D V
Sbjct: 46 ATGREKKMLLARLAGDDRYEPKVYYRAEASTKQKPNLVPSHYDFRIIGCMC--EQDSGHV 103
Query: 126 VWFWLEKGKPHECPVCSQYF 145
+ + KG+P C C +F
Sbjct: 104 NFMTIAKGEPKRCE-CGHWF 122
>gi|17506881|ref|NP_492601.1| Protein CCO-1 [Caenorhabditis elegans]
gi|3876417|emb|CAB03002.1| Protein CCO-1 [Caenorhabditis elegans]
Length = 132
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG E++ L A L G + E Y TK P +V S+YD RI+GC +D V
Sbjct: 46 ATGREKKMLLARLAGDDRYEPKVYYRAEASTKQKPNLVPSHYDFRIIGCMC--EQDSGHV 103
Query: 126 VWFWLEKGKPHECPVCSQYF 145
+ + KG P C C +F
Sbjct: 104 NFMTIRKGDPKRCE-CGHWF 122
>gi|281204169|gb|EFA78365.1| cytochrome c oxidase subunit V [Polysphondylium pallidum PN500]
Length = 120
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 91 TGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVV 150
TGPFGT +P VV+S ++ R VG G +EHD+++ + KP C C Q F L+ +
Sbjct: 53 TGPFGTLKSPVVVESIFEHRSVG-CEGGEGEEHDLIFHKVTAKKPTICLDCGQVFKLKKI 111
Query: 151 GPGG 154
G G
Sbjct: 112 GTEG 115
>gi|365760848|gb|EHN02536.1| Cox4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 155
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 68 TGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 126
TG R EL +LEG ++ + + GT P +++SY D R VGC G H ++
Sbjct: 64 TGLARLELLGKLEGIDVFDSKPLDSSRKGTMKDPIIIESYDDYRYVGCTGSPA-GSHTIM 122
Query: 127 WFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHH 165
W + C C + L P G DDHH
Sbjct: 123 WLKPTVNEVARCWECGSVYKLN-------PVGVPSDDHH 154
>gi|225710842|gb|ACO11267.1| Cytochrome c oxidase subunit 5B, mitochondrial precursor [Caligus
rogercresseyi]
Length = 133
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 30 SIASRSLISRPLFASRHFSADSAGTSVKK----RVEDVNPVATGHEREELEAELEGKN-- 83
++ +RS +S L R FS +S K ++ D ATG E+ EL A G +
Sbjct: 3 NLIARSALS--LAGRRSFSVSCVTSSKDKGKGTKMSDPTFHATGLEKYELLAAEAGNDDP 60
Query: 84 -ILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCS 142
L T G+K+ P VV + + R+VGC E + ++ W WL + KP C C
Sbjct: 61 FFLRAKKITK--GSKEEPHVVDALDEFRMVGCVC--NEHDTNIKWMWLFENKPKGCR-CG 115
Query: 143 QYFVLE 148
+F L+
Sbjct: 116 YWFKLK 121
>gi|449542532|gb|EMD33511.1| hypothetical protein CERSUDRAFT_26055, partial [Ceriporiopsis
subvermispora B]
Length = 94
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER ++ E EG + ++ + GT P V S +RI+GC G E H++
Sbjct: 18 ATGLERLQILGEKEGVEVFDLKPLDSSRIGTLADPIKVYSLAPERIIGCTGSPAES-HEL 76
Query: 126 VWFWLEKGKPHECPVC 141
W L K CP C
Sbjct: 77 HWMNLTTEKVRRCPEC 92
>gi|326434068|gb|EGD79638.1| hypothetical protein PTSG_10486 [Salpingoeca sp. ATCC 50818]
Length = 153
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 10/100 (10%)
Query: 53 GTSVKKRVEDVNPVATGHEREELEAELEGKN----ILEIDYPTGPFGTKDAPAVVKSYYD 108
G V RV D + ATG ER EL +G + I + GP GTK P + S++D
Sbjct: 50 GYGVTGRVPDNHEQATGLERLELLELAKGNTDPFGLEGIKW--GPAGTKAEPREIPSHFD 107
Query: 109 KRIVGCPGGEGEDEHDVV-WFWLEKGKPHECPVCSQYFVL 147
R+VGC + E ++V +F+++ G CP QYF L
Sbjct: 108 SRLVGCC---CDPESELVKYFYVKGGDAQACPCGQQYFKL 144
>gi|324528387|gb|ADY48907.1| Cytochrome c oxidase subunit 5B [Ascaris suum]
Length = 137
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 41 LFASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEGKNILEID-YPTGPFGTKDA 99
LF+ R F A A D ATG E++ L A L G + E Y +++
Sbjct: 26 LFSRRTF-ATEANPEDYGYYPDPLEAATGREKKMLLARLAGDDRYEPKVYYRAEVSSREK 84
Query: 100 PAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYF 145
P +V S++D+RI+GC E + H V + + KG P C C +F
Sbjct: 85 PNLVPSHFDERIIGC-MCEPDSGH-VNFMMIRKGSPKRCE-CGHWF 127
>gi|167525136|ref|XP_001746903.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774683|gb|EDQ88310.1| predicted protein [Monosiga brevicollis MX1]
Length = 155
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 56 VKKRVEDVNPVATGHEREELEAELEGKNI---LEIDYPTGPFGTKDAPAVVKSYYDKRIV 112
V+ R+ D ATG ER+E+ +G + LE GP GTK++P ++ S+ D+RIV
Sbjct: 56 VEGRIPDNWEQATGMERKEMIEMAKGNSDPFGLE-GLKWGPVGTKESPRMIPSHVDERIV 114
Query: 113 GCPGGEGEDEHDVV-WFWLEKGKPHECPVCSQYFVLE 148
GC + E +V+ +F L+ G P P Q+F L+
Sbjct: 115 GC---VVDPESEVITYFNLKAGPPVMGP-DGQWFQLQ 147
>gi|146165583|ref|XP_001015443.2| hypothetical protein TTHERM_00378620 [Tetrahymena thermophila]
gi|146145413|gb|EAR95198.2| hypothetical protein TTHERM_00378620 [Tetrahymena thermophila
SB210]
Length = 586
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 83 NILEIDYPTGPFGTKDAPAVV-KSYYDKRIVGCPGGEGEDE---HDVVWFWLEKGKPHEC 138
N LE + T FGT D P VV S R VGC G ED+ H++++F L +G C
Sbjct: 79 NYLE-NTQTSNFGTVDNPLVVFTSETPFRYVGCTGQMNEDDYEGHELLFFLLREGSLQRC 137
Query: 139 PVCSQYFVL 147
C Q F L
Sbjct: 138 MGCGQVFKL 146
>gi|340505803|gb|EGR32106.1| hypothetical protein IMG5_096630 [Ichthyophthirius multifiliis]
Length = 571
Score = 40.0 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 94 FGTKDAPAVV-KSYYDKRIVGCPGGEGEDE---HDVVWFWLEKGKPHECPVCSQYFVL 147
FGT D P VV S R VGC G ED+ H++++F L +G C C Q F L
Sbjct: 84 FGTVDNPLVVFTSETPFRYVGCTGQMNEDDYEGHELMYFMLREGPMQRCMGCGQVFKL 141
>gi|124014090|gb|ABM88295.1| mitochondrial cytochrome c oxidase subunit 5B isoform 2 [Drosophila
simulans]
Length = 155
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 95 GTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGK-PHECPVCSQYFVLEVVGP 152
G ++ P VV S +D R+VGC D+ W W+EK + P C C YF+L+ V P
Sbjct: 100 GRENDPTVVPSAFDARLVGC---LCLDDRLPKWMWIEKDEGPKRCE-CGHYFILKNVPP 154
>gi|195471750|ref|XP_002088165.1| GE13977 [Drosophila yakuba]
gi|194174266|gb|EDW87877.1| GE13977 [Drosophila yakuba]
Length = 155
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 95 GTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGK-PHECPVCSQYFVLEVVGP 152
G ++ P VV S +D RIVGC D+ W W+EK + P C C +FVL+ V P
Sbjct: 100 GRENDPTVVPSAFDARIVGC---LCLDDRLPKWMWIEKDEGPKRCE-CGHFFVLKNVPP 154
>gi|20129281|ref|NP_609047.1| CG11043 [Drosophila melanogaster]
gi|7297136|gb|AAF52403.1| CG11043 [Drosophila melanogaster]
gi|66771519|gb|AAY55071.1| IP07710p [Drosophila melanogaster]
Length = 154
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 95 GTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGK-PHECPVCSQYFVLEVVGP 152
G ++ P VV S +D R+VGC D+ W W+EK + P C C YF+L+ V P
Sbjct: 99 GRENDPTVVPSAFDARLVGC---LCLDDRLPKWMWIEKDEGPKRCE-CGHYFILKNVPP 153
>gi|124014092|gb|ABM88296.1| mitochondrial cytochrome c oxidase subunit 5B isoform 2 [Drosophila
simulans]
Length = 155
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 95 GTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGK-PHECPVCSQYFVLEVVGP 152
G ++ P VV S +D R+VGC D+ W W+EK + P C C YF+L+ V P
Sbjct: 100 GRENDPTVVPSAFDARLVGC---LCLDDRLPKWMWIEKDEGPKRCE-CGHYFILKNVPP 154
>gi|195338670|ref|XP_002035947.1| GM16174 [Drosophila sechellia]
gi|195577058|ref|XP_002078390.1| cytochrome c oxidase subunit Vb [Drosophila simulans]
gi|124014082|gb|ABM88291.1| mitochondrial cytochrome c oxidase subunit 5B isoform 2 [Drosophila
simulans]
gi|124014084|gb|ABM88292.1| mitochondrial cytochrome c oxidase subunit 5B isoform 2 [Drosophila
simulans]
gi|124014086|gb|ABM88293.1| mitochondrial cytochrome c oxidase subunit 5B isoform 2 [Drosophila
simulans]
gi|124014088|gb|ABM88294.1| mitochondrial cytochrome c oxidase subunit 5B isoform 2 [Drosophila
simulans]
gi|124014096|gb|ABM88298.1| mitochondrial cytochrome c oxidase subunit 5B isoform 2 [Drosophila
simulans]
gi|194129827|gb|EDW51870.1| GM16174 [Drosophila sechellia]
gi|194190399|gb|EDX03975.1| cytochrome c oxidase subunit Vb [Drosophila simulans]
Length = 155
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 95 GTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGK-PHECPVCSQYFVLEVVGP 152
G ++ P VV S +D R+VGC D+ W W+EK + P C C YF+L+ V P
Sbjct: 100 GRENDPTVVPSAFDARLVGC---LCLDDRLPKWMWIEKDEGPKRCE-CGHYFILKNVPP 154
>gi|124014094|gb|ABM88297.1| mitochondrial cytochrome c oxidase subunit 5B isoform 2 [Drosophila
simulans]
Length = 154
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 95 GTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGK-PHECPVCSQYFVLEVVGP 152
G ++ P VV S +D R+VGC D+ W W+EK + P C C YF+L+ V P
Sbjct: 99 GRENDPTVVPSAFDARLVGC---LCLDDRLPKWMWIEKDEGPKRCE-CGHYFILKNVPP 153
>gi|358054187|dbj|GAA99723.1| hypothetical protein E5Q_06426 [Mixia osmundae IAM 14324]
Length = 147
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
+TG ER EL +L+G +I ++ GT P +V S R VGC G D HD
Sbjct: 54 STGLERIELLGKLQGVDIFDMSPLKVEHMGTLKNPIMVASLDKSRTVGCTGFP-VDSHDT 112
Query: 126 VWFWL-EKGKPHECPVCSQYFVLEVVG 151
++ + + + CP C + ++ G
Sbjct: 113 IYMVVPHQEQATRCPECGCAYAIDFQG 139
>gi|194862572|ref|XP_001970033.1| GG10420 [Drosophila erecta]
gi|190661900|gb|EDV59092.1| GG10420 [Drosophila erecta]
Length = 155
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 95 GTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGK-PHECPVCSQYFVLEVVGP 152
G ++ P VV S +D R+VGC D+ W W+EK + P C C +FVL+ V P
Sbjct: 100 GRENDPTVVPSAFDARLVGC---LCLDDRMPKWMWIEKDEGPKRCE-CGHFFVLKNVPP 154
>gi|242024217|ref|XP_002432525.1| cytochrome c oxidase polypeptide Vb isoform 2, putative [Pediculus
humanus corporis]
gi|212517977|gb|EEB19787.1| cytochrome c oxidase polypeptide Vb isoform 2, putative [Pediculus
humanus corporis]
Length = 124
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 44 SRHFSADSAGTSVKKRVEDVNPVATGHEREELEAELEGK--NILEIDYPTGPFGTKDAPA 101
S+ F S G +R +ATG +R + +G L+ P GP GTK+ P
Sbjct: 13 SKKFIHTSKGCG--RRCPHWWELATGEDRWQAVQCAKGNLDPYLQKPVPRGP-GTKECPN 69
Query: 102 VVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLE 148
+V SY R+V C +G + F +E+G P C C+ +FVLE
Sbjct: 70 IVPSYASFRVVYCICDDGVAHNT---FIVEEGVPRRCD-CNYWFVLE 112
>gi|50553496|ref|XP_504159.1| YALI0E19723p [Yarrowia lipolytica]
gi|49650028|emb|CAG79754.1| YALI0E19723p [Yarrowia lipolytica CLIB122]
Length = 162
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 68 TGHEREELEAELEGKNILEIDYPTGP----FGTKDAPAVVKSYYDKRIVGCPGGEGEDEH 123
TG R EL +++G +I ++ P GT D P V +Y + RIVGC G H
Sbjct: 68 TGLARLELLGKMDGIDIFDLGPVIRPQHSVKGTPDDPIWVPTYDNSRIVGC-SGTPHGSH 126
Query: 124 DVVWFWLEKGKPHECPVCSQYF 145
+V WF K C C +
Sbjct: 127 EVQWFHAGVDKVGRCDECGAVY 148
>gi|242801739|ref|XP_002483829.1| cytochrome c subunit Vb, putative [Talaromyces stipitatus ATCC
10500]
gi|218717174|gb|EED16595.1| cytochrome c subunit Vb, putative [Talaromyces stipitatus ATCC
10500]
Length = 193
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL +++G ++ ++ GT + P +V D++ GC G D H V
Sbjct: 72 ATGLERLELLGKMQGIDVFDMKPLDASRKGTLENPIIVNGAGDEQYAGCTGYPA-DSHIV 130
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGPGGPP 156
W + + +P E C C L VGP
Sbjct: 131 NWLTVSRERPIERCLECGNVVKLNYVGPDTDA 162
>gi|212540444|ref|XP_002150377.1| cytochrome c subunit Vb, putative [Talaromyces marneffei ATCC
18224]
gi|210067676|gb|EEA21768.1| cytochrome c subunit Vb, putative [Talaromyces marneffei ATCC
18224]
Length = 192
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 67 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 125
ATG ER EL ++ G ++ ++ GT + P +V D++ GC G D H V
Sbjct: 71 ATGLERLELLGKMRGIDVFDMRPLDASRKGTLEDPIIVNGAGDEQYAGC-TGYPVDSHIV 129
Query: 126 VWFWLEKGKPHE-CPVCSQYFVLEVVGP 152
W + + +P E C C L VGP
Sbjct: 130 NWLTVSRERPIERCLECGNVVKLNYVGP 157
>gi|356525693|ref|XP_003531458.1| PREDICTED: uncharacterized protein LOC100783042 [Glycine max]
Length = 27
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/19 (89%), Positives = 17/19 (89%)
Query: 147 LEVVGPGGPPDGHGDDDHH 165
LEVVGPGG PDGH DDDHH
Sbjct: 9 LEVVGPGGSPDGHADDDHH 27
>gi|114328628|ref|YP_745785.1| putative cytoplasmic protein [Granulibacter bethesdensis CGDNIH1]
gi|114316802|gb|ABI62862.1| hypothetical cytosolic protein [Granulibacter bethesdensis CGDNIH1]
Length = 85
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 90 PTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEV 149
P P G +APA D +V C GG H VW + G+ CP CS+ +VL
Sbjct: 20 PVAPAGL-NAPASETILVDSHVVSCDGGNAPLGHPRVWLRI-AGQRVMCPYCSRLYVLTA 77
Query: 150 VGPG 153
P
Sbjct: 78 DAPA 81
>gi|224030087|gb|ACN34119.1| unknown [Zea mays]
gi|413948649|gb|AFW81298.1| hypothetical protein ZEAMMB73_948004 [Zea mays]
gi|413948650|gb|AFW81299.1| hypothetical protein ZEAMMB73_948004 [Zea mays]
Length = 245
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 31/39 (79%)
Query: 59 RVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTK 97
+VEDV P+ATG EREELEAEL+GK ++D GPFGTK
Sbjct: 55 KVEDVMPIATGLEREELEAELQGKKRFDMDPAVGPFGTK 93
>gi|413948648|gb|AFW81297.1| hypothetical protein ZEAMMB73_948004 [Zea mays]
Length = 166
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 31/39 (79%)
Query: 59 RVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTK 97
+VEDV P+ATG EREELEAEL+GK ++D GPFGTK
Sbjct: 55 KVEDVMPIATGLEREELEAELQGKKRFDMDPAVGPFGTK 93
>gi|413948651|gb|AFW81300.1| hypothetical protein ZEAMMB73_948004 [Zea mays]
Length = 94
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 31/39 (79%)
Query: 59 RVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTK 97
+VEDV P+ATG EREELEAEL+GK ++D GPFGTK
Sbjct: 55 KVEDVMPIATGLEREELEAELQGKKRFDMDPAVGPFGTK 93
>gi|1352168|sp|P80499.1|COX5B_SOLTU RecName: Full=Cytochrome c oxidase subunit 5B, mitochondrial;
AltName: Full=Cytochrome c oxidase polypeptide Vb
Length = 28
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 51 SAGTSVKKRVEDVNPVATGHEREELEAE 78
+ +V K+VEDV P+ATGHERE L A+
Sbjct: 1 TVSENVVKKVEDVMPIATGHEREXLXAQ 28
>gi|299115483|emb|CBN75647.1| Cytochrome c oxidase subunit Vb [Ectocarpus siliculosus]
Length = 132
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 72 REELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLE 131
R++ E E G N I P G GTK P V S + +R+VG E + H + WF L
Sbjct: 58 RQKTEREGVGFNRDPIHPPKGS-GTKAMPFEVPSEHQERVVGF---EHPESHAMYWFPLA 113
Query: 132 KGKPHECPVCSQYFVL 147
GK H +YF L
Sbjct: 114 AGKLHYVEEIDRYFKL 129
>gi|71023385|ref|XP_761922.1| hypothetical protein UM05775.1 [Ustilago maydis 521]
gi|46100781|gb|EAK86014.1| hypothetical protein UM05775.1 [Ustilago maydis 521]
Length = 211
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 62/165 (37%), Gaps = 26/165 (15%)
Query: 1 MWRRICSSQLKAQALALAQYSCRSA-----PVNP---SIASRSLISRPL------FASRH 46
M R+ + L +AL C SA PVN S AS + RP+ H
Sbjct: 51 MANRLVTVTLARRALHTTPAICSSAGFFVRPVNAPTSSNASSAPQPRPIRPVAQVHTPEH 110
Query: 47 FSADSAGTSVKKRVEDVNP---VATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVV 103
A+ A E NP G E+L+ + + + I+ + P +
Sbjct: 111 IPAEQAPNFPTTWSESQNPRQNAMKGPRFEQLDMRFQPQPLAAIEM------IQREPIRL 164
Query: 104 KSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLE 148
S KRI C GG G H V+ L+K P CP C F L+
Sbjct: 165 SS---KRIAACDGGGGPLGHPKVFINLDKPGPKPCPYCGIRFELD 206
>gi|386381011|ref|ZP_10066817.1| LuxR family transcriptional regulator [Streptomyces tsukubaensis
NRRL18488]
gi|385671526|gb|EIF94463.1| LuxR family transcriptional regulator [Streptomyces tsukubaensis
NRRL18488]
Length = 213
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 21 SCRSAPVNPSIASRSLISRPLFASRHFSADSAGTSVKKRVEDVNPVATGHEREELEAEL- 79
+ R+A ++ S ++ SR L A R + + GT + E ++ VA G E+ A+L
Sbjct: 116 AVRAAADGRAVLSPAVASRLLSAVRGPAVPADGTLSGREREVLSLVARGTSNREIAAKLF 175
Query: 80 --EGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCP 115
E + + G G KD A V + YD+ I+G P
Sbjct: 176 ISEATVKTHLTHIYGKLGVKDRAAAVAAGYDRGILGSP 213
>gi|343426106|emb|CBQ69638.1| related to NADH2 dehydrogenase (ubiquinone) complex I 13K-A chain
precursor [Sporisorium reilianum SRZ2]
Length = 159
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 109 KRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLE 148
KRI C GG G +H V+ L+K P CP C F L+
Sbjct: 115 KRIAACDGGGGPLDHPKVFINLDKPGPKPCPYCGIRFELD 154
>gi|403362015|gb|EJY80723.1| hypothetical protein OXYTRI_21887 [Oxytricha trifallax]
Length = 641
Score = 35.8 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 94 FGTKDAPAVV-KSYYDKRIVGCPGGEGEDE---HDVVWFWLEKGKPHECPVCSQYF 145
FGT D P ++ S RIV C G ED+ H+ +++++ +G H C VC Q F
Sbjct: 109 FGTIDNPVLIFTSDSSWRIVICMGPGIEDDSHSHEKMFYFVREGPIHRCQVCGQCF 164
>gi|339021433|ref|ZP_08645511.1| hypothetical protein ATPR_1819 [Acetobacter tropicalis NBRC 101654]
gi|338751497|dbj|GAA08815.1| hypothetical protein ATPR_1819 [Acetobacter tropicalis NBRC 101654]
Length = 71
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 8/75 (10%)
Query: 90 PTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEV 149
PT P V D+R + C GG G H VW + G CP CS+ FVL+
Sbjct: 5 PTNPVPHPRLGHVETIVVDRRKIACDGGLGALGHPRVWLKI-GGHQTVCPYCSRLFVLQ- 62
Query: 150 VGPGGPPDGHGDDDH 164
P H D H
Sbjct: 63 ------PGAHDDHGH 71
>gi|195657347|gb|ACG48141.1| cytochrome c oxidase polypeptide Vb [Zea mays]
Length = 106
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 59 RVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTK 97
+VEDV P+ATG EREELEAEL+GK ++D PFGTK
Sbjct: 55 KVEDVMPIATGLEREELEAELQGKKRFDMDPAVSPFGTK 93
>gi|407919875|gb|EKG13096.1| Cytochrome c oxidase subunit Vb [Macrophomina phaseolina MS6]
Length = 117
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 20/77 (25%)
Query: 95 GTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVW------------------FWLEKGKPH 136
GT D P +V+S+ D++ GC G D H V W + + + +P
Sbjct: 5 GTLDNPIIVRSFGDEQYAGCTGVPA-DSHVVKWLTVCGSNIAYRRSDRTNTYQMSRDRPI 63
Query: 137 E-CPVCSQYFVLEVVGP 152
E CP C +E VGP
Sbjct: 64 ERCPECGNVLKMEYVGP 80
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.135 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,164,095,474
Number of Sequences: 23463169
Number of extensions: 144662793
Number of successful extensions: 314720
Number of sequences better than 100.0: 446
Number of HSP's better than 100.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 241
Number of HSP's that attempted gapping in prelim test: 314128
Number of HSP's gapped (non-prelim): 454
length of query: 165
length of database: 8,064,228,071
effective HSP length: 126
effective length of query: 39
effective length of database: 9,402,836,073
effective search space: 366710606847
effective search space used: 366710606847
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)