Query 031109
Match_columns 165
No_of_seqs 213 out of 832
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 14:45:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031109.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031109hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3es4_A Uncharacterized protein 99.9 1.8E-27 6E-32 180.2 11.9 88 74-164 23-112 (116)
2 3myx_A Uncharacterized protein 99.9 5.2E-27 1.8E-31 196.1 13.6 110 50-165 127-238 (238)
3 3bcw_A Uncharacterized protein 99.9 2.3E-23 7.8E-28 157.3 9.8 91 73-164 27-119 (123)
4 3myx_A Uncharacterized protein 99.7 2.8E-17 9.5E-22 137.3 12.7 89 73-164 25-115 (238)
5 2pyt_A Ethanolamine utilizatio 99.7 4.4E-17 1.5E-21 123.8 11.2 88 75-164 35-125 (133)
6 1o5u_A Novel thermotoga mariti 99.7 2.2E-16 7.5E-21 115.0 11.8 85 53-164 16-100 (101)
7 4axo_A EUTQ, ethanolamine util 99.6 1.4E-15 4.9E-20 119.1 11.9 89 74-164 42-134 (151)
8 3lwc_A Uncharacterized protein 99.4 4.4E-12 1.5E-16 94.2 11.7 69 94-164 40-110 (119)
9 3h8u_A Uncharacterized conserv 98.6 3.2E-07 1.1E-11 66.1 9.2 65 91-156 36-103 (125)
10 2i45_A Hypothetical protein; n 98.6 1.3E-07 4.6E-12 66.6 6.9 57 102-159 36-94 (107)
11 1yhf_A Hypothetical protein SP 98.6 7.8E-07 2.7E-11 62.8 10.9 70 91-162 37-108 (115)
12 3fjs_A Uncharacterized protein 98.6 6.1E-07 2.1E-11 64.9 10.4 69 91-161 33-103 (114)
13 2pfw_A Cupin 2, conserved barr 98.5 9.3E-07 3.2E-11 62.5 10.5 68 93-162 33-102 (116)
14 1v70_A Probable antibiotics sy 98.5 1E-06 3.4E-11 60.0 10.0 63 92-156 26-91 (105)
15 2ozj_A Cupin 2, conserved barr 98.5 1.6E-06 5.6E-11 61.5 10.6 64 94-159 38-103 (114)
16 2q30_A Uncharacterized protein 98.5 1.4E-06 4.7E-11 60.6 9.8 67 92-159 31-101 (110)
17 2fqp_A Hypothetical protein BP 98.4 4.2E-07 1.4E-11 63.5 6.7 65 92-156 16-83 (97)
18 3d82_A Cupin 2, conserved barr 98.4 1.8E-06 6.2E-11 59.2 9.7 54 104-159 40-95 (102)
19 4e2g_A Cupin 2 conserved barre 98.4 1.4E-06 4.9E-11 62.5 9.3 63 93-157 40-104 (126)
20 3rns_A Cupin 2 conserved barre 98.4 2.4E-06 8.2E-11 68.7 11.3 75 85-161 28-104 (227)
21 2opk_A Hypothetical protein; p 98.4 1.9E-06 6.3E-11 62.4 9.0 49 108-156 49-97 (112)
22 3l2h_A Putative sugar phosphat 98.4 1.1E-06 3.9E-11 66.4 8.1 60 94-155 46-110 (162)
23 2b8m_A Hypothetical protein MJ 98.4 2.5E-06 8.6E-11 60.7 9.4 63 93-157 26-91 (117)
24 2oyz_A UPF0345 protein VPA0057 98.4 2E-06 6.8E-11 62.8 8.4 63 94-158 25-87 (94)
25 3i7d_A Sugar phosphate isomera 98.3 2.3E-06 7.8E-11 65.8 9.0 60 94-155 43-108 (163)
26 2gu9_A Tetracenomycin polyketi 98.3 3.3E-06 1.1E-10 58.6 8.9 62 93-156 20-86 (113)
27 3rns_A Cupin 2 conserved barre 98.3 4.1E-06 1.4E-10 67.3 10.8 76 86-163 145-223 (227)
28 3ht1_A REMF protein; cupin fol 98.3 2.3E-06 8E-11 62.4 7.8 61 94-156 39-103 (145)
29 1vj2_A Novel manganese-contain 98.3 7.2E-06 2.5E-10 59.7 10.3 61 94-156 48-110 (126)
30 4b29_A Dimethylsulfoniopropion 98.3 4E-06 1.4E-10 69.2 9.8 69 94-163 132-203 (217)
31 1juh_A Quercetin 2,3-dioxygena 98.3 1.9E-06 6.5E-11 74.0 8.0 56 108-164 268-323 (350)
32 2vpv_A Protein MIF2, MIF2P; nu 98.3 7.4E-06 2.5E-10 64.8 10.8 77 85-163 78-161 (166)
33 1vr3_A Acireductone dioxygenas 98.3 9.1E-07 3.1E-11 71.5 5.6 97 58-157 39-152 (191)
34 3ibm_A Cupin 2, conserved barr 98.3 7.9E-06 2.7E-10 63.2 10.5 61 94-156 56-118 (167)
35 2o8q_A Hypothetical protein; c 98.2 4.4E-06 1.5E-10 60.8 8.2 50 106-156 56-107 (134)
36 3es1_A Cupin 2, conserved barr 98.2 2.8E-06 9.6E-11 67.4 7.4 73 89-163 74-150 (172)
37 2bnm_A Epoxidase; oxidoreducta 98.2 1E-05 3.5E-10 62.5 9.7 69 94-162 117-195 (198)
38 1o4t_A Putative oxalate decarb 98.2 1.6E-05 5.3E-10 58.6 10.0 60 95-156 58-120 (133)
39 2oa2_A BH2720 protein; 1017534 98.2 1.1E-05 3.8E-10 60.3 9.1 61 94-156 43-112 (148)
40 3kgz_A Cupin 2 conserved barre 98.1 1.3E-05 4.6E-10 61.6 9.5 68 94-163 44-115 (156)
41 1yfu_A 3-hydroxyanthranilate-3 98.1 6.2E-06 2.1E-10 66.1 7.1 58 94-152 36-97 (174)
42 3cew_A Uncharacterized cupin p 98.1 4.2E-05 1.4E-09 55.0 10.9 61 93-155 25-89 (125)
43 3jzv_A Uncharacterized protein 98.1 1.7E-05 5.9E-10 61.7 9.4 60 94-155 53-114 (166)
44 1dgw_A Canavalin; duplicated s 98.1 1.3E-05 4.5E-10 62.5 8.2 62 94-155 41-106 (178)
45 1sfn_A Conserved hypothetical 98.1 2.8E-05 9.6E-10 63.4 10.3 65 94-161 50-115 (246)
46 4i4a_A Similar to unknown prot 98.0 4.1E-05 1.4E-09 54.9 9.9 56 98-155 38-95 (128)
47 1lr5_A Auxin binding protein 1 98.0 2.4E-05 8.3E-10 59.1 9.1 63 94-156 41-112 (163)
48 2f4p_A Hypothetical protein TM 98.0 3.8E-05 1.3E-09 57.8 10.0 62 94-156 48-111 (147)
49 1y9q_A Transcriptional regulat 98.0 2.5E-05 8.4E-10 60.3 9.1 61 94-156 104-168 (192)
50 2arc_A ARAC, arabinose operon 98.0 2.1E-05 7.3E-10 57.7 8.2 60 94-155 13-79 (164)
51 1rc6_A Hypothetical protein YL 98.0 4.8E-05 1.6E-09 62.1 11.1 61 94-156 179-242 (261)
52 1fi2_A Oxalate oxidase, germin 98.0 4.9E-05 1.7E-09 60.1 10.6 70 94-163 72-152 (201)
53 4h7l_A Uncharacterized protein 98.0 1.3E-05 4.3E-10 63.1 7.0 57 95-153 48-107 (157)
54 2vqa_A SLL1358 protein, MNCA; 98.0 8.2E-05 2.8E-09 62.7 11.7 62 95-156 53-120 (361)
55 1sq4_A GLXB, glyoxylate-induce 97.9 3.1E-05 1.1E-09 64.5 8.6 66 94-161 68-139 (278)
56 4e2q_A Ureidoglycine aminohydr 97.9 4.6E-05 1.6E-09 64.2 9.7 68 94-162 70-139 (266)
57 1zvf_A 3-hydroxyanthranilate 3 97.9 1.5E-05 5.2E-10 63.9 6.3 53 98-150 38-98 (176)
58 3d0j_A Uncharacterized protein 97.9 3.9E-05 1.3E-09 59.5 8.3 70 89-158 20-102 (140)
59 1x82_A Glucose-6-phosphate iso 97.9 6.5E-05 2.2E-09 59.1 9.6 62 94-156 67-143 (190)
60 1y3t_A Hypothetical protein YX 97.9 6.9E-05 2.4E-09 61.9 9.8 62 94-157 46-110 (337)
61 3h7j_A Bacilysin biosynthesis 97.9 4.7E-05 1.6E-09 61.6 8.4 62 94-157 34-98 (243)
62 1sef_A Conserved hypothetical 97.9 6.8E-05 2.3E-09 61.8 9.3 62 94-157 182-246 (274)
63 2ea7_A 7S globulin-1; beta bar 97.8 0.0001 3.4E-09 65.6 10.8 63 94-156 61-127 (434)
64 2cav_A Protein (canavalin); vi 97.8 9.5E-05 3.3E-09 66.0 10.1 63 94-156 86-152 (445)
65 1rc6_A Hypothetical protein YL 97.8 4.4E-05 1.5E-09 62.3 7.2 60 95-156 60-123 (261)
66 3h7j_A Bacilysin biosynthesis 97.8 5.8E-05 2E-09 61.0 7.5 63 99-163 150-217 (243)
67 2xlg_A SLL1785 protein, CUCA; 97.8 3.6E-05 1.2E-09 63.5 6.3 63 94-157 43-127 (239)
68 1uij_A Beta subunit of beta co 97.8 0.00012 4.1E-09 64.7 10.0 62 94-155 49-114 (416)
69 1y3t_A Hypothetical protein YX 97.8 7.4E-05 2.5E-09 61.8 7.9 44 112-157 239-282 (337)
70 1sef_A Conserved hypothetical 97.8 6.7E-05 2.3E-09 61.8 7.5 60 95-156 63-126 (274)
71 3eo6_A Protein of unknown func 97.7 0.00015 5E-09 54.0 8.5 63 94-158 38-100 (106)
72 2vqa_A SLL1358 protein, MNCA; 97.7 0.00017 5.9E-09 60.7 9.7 61 94-155 234-301 (361)
73 1j58_A YVRK protein; cupin, de 97.7 0.00032 1.1E-08 59.7 11.4 63 93-156 78-146 (385)
74 2ozi_A Hypothetical protein RP 97.7 7.8E-05 2.7E-09 53.3 6.3 65 90-154 13-81 (98)
75 1juh_A Quercetin 2,3-dioxygena 97.7 8.6E-05 2.9E-09 63.7 7.1 49 108-156 67-118 (350)
76 2qnk_A 3-hydroxyanthranilate 3 97.6 9.1E-05 3.1E-09 63.3 6.6 59 92-150 30-91 (286)
77 1fxz_A Glycinin G1; proglycini 97.6 0.00033 1.1E-08 63.1 10.4 61 94-154 338-405 (476)
78 3lag_A Uncharacterized protein 97.6 6.7E-05 2.3E-09 53.3 4.4 64 90-153 13-80 (98)
79 2d5f_A Glycinin A3B4 subunit; 97.6 0.00061 2.1E-08 61.7 11.4 60 94-153 367-433 (493)
80 3fz3_A Prunin; TREE NUT allerg 97.5 0.00058 2E-08 62.7 11.2 57 94-150 394-457 (531)
81 1j58_A YVRK protein; cupin, de 97.5 0.00048 1.6E-08 58.7 9.6 62 94-155 257-324 (385)
82 3c3v_A Arachin ARAH3 isoform; 97.5 0.00046 1.6E-08 62.9 10.0 61 94-154 372-439 (510)
83 1sfn_A Conserved hypothetical 97.5 0.0012 4E-08 53.6 11.1 62 94-157 165-229 (246)
84 2d40_A Z3393, putative gentisa 97.4 0.0002 6.7E-09 61.7 6.1 61 94-155 100-162 (354)
85 3hqx_A UPF0345 protein aciad03 97.4 0.00082 2.8E-08 50.3 8.2 63 94-158 39-103 (111)
86 1zrr_A E-2/E-2' protein; nicke 97.3 8.3E-05 2.8E-09 59.1 2.6 50 106-156 93-146 (179)
87 3s7i_A Allergen ARA H 1, clone 97.3 0.00076 2.6E-08 59.9 9.1 58 98-155 48-109 (418)
88 2e9q_A 11S globulin subunit be 97.3 0.00051 1.7E-08 61.7 7.1 58 95-152 323-387 (459)
89 3bu7_A Gentisate 1,2-dioxygena 97.2 0.0011 3.8E-08 58.5 9.0 60 94-154 123-184 (394)
90 3nw4_A Gentisate 1,2-dioxygena 97.2 0.0006 2.1E-08 59.8 6.8 62 94-156 103-166 (368)
91 1eyb_A Homogentisate 1,2-dioxy 97.2 0.002 7E-08 58.3 10.0 69 92-163 155-226 (471)
92 3kgl_A Cruciferin; 11S SEED gl 97.2 0.00067 2.3E-08 61.3 6.9 57 96-152 325-388 (466)
93 3ksc_A LEGA class, prolegumin; 97.2 0.00058 2E-08 62.1 6.4 55 96-150 360-421 (496)
94 3qac_A 11S globulin SEED stora 97.1 0.0009 3.1E-08 60.4 6.9 56 95-150 324-386 (465)
95 2d40_A Z3393, putative gentisa 97.0 0.0028 9.7E-08 54.5 8.8 59 97-158 271-332 (354)
96 2phl_A Phaseolin; plant SEED s 97.0 0.0018 6E-08 57.2 7.6 62 95-156 53-124 (397)
97 1fxz_A Glycinin G1; proglycini 97.0 0.0049 1.7E-07 55.5 10.6 66 99-164 53-147 (476)
98 2e9q_A 11S globulin subunit be 97.0 0.0049 1.7E-07 55.3 10.6 59 98-156 67-151 (459)
99 2phl_A Phaseolin; plant SEED s 97.0 0.0013 4.5E-08 58.0 6.6 64 94-157 239-315 (397)
100 2o1q_A Putative acetyl/propion 96.9 0.0076 2.6E-07 45.4 9.7 60 95-156 45-109 (145)
101 1sq4_A GLXB, glyoxylate-induce 96.9 0.0028 9.6E-08 52.6 7.5 69 94-164 191-264 (278)
102 1uij_A Beta subunit of beta co 96.8 0.0031 1.1E-07 55.6 7.7 64 95-158 250-333 (416)
103 2qnk_A 3-hydroxyanthranilate 3 96.8 0.005 1.7E-07 52.6 8.6 72 87-162 202-274 (286)
104 3qac_A 11S globulin SEED stora 96.7 0.014 4.6E-07 52.7 11.5 56 99-155 55-153 (465)
105 2ea7_A 7S globulin-1; beta bar 96.7 0.0014 4.7E-08 58.3 4.9 62 96-157 268-348 (434)
106 3bu7_A Gentisate 1,2-dioxygena 96.7 0.0078 2.7E-07 53.1 9.3 59 95-155 295-355 (394)
107 2d5f_A Glycinin A3B4 subunit; 96.7 0.016 5.4E-07 52.5 11.4 60 97-156 48-137 (493)
108 2cav_A Protein (canavalin); vi 96.6 0.0021 7.2E-08 57.3 5.3 60 94-153 281-357 (445)
109 3ksc_A LEGA class, prolegumin; 96.5 0.017 5.7E-07 52.6 10.8 58 99-156 51-134 (496)
110 3c3v_A Arachin ARAH3 isoform; 96.5 0.034 1.2E-06 50.7 12.4 68 97-164 51-160 (510)
111 4e2q_A Ureidoglycine aminohydr 96.4 0.015 5.2E-07 48.8 9.2 61 94-156 186-249 (266)
112 3nw4_A Gentisate 1,2-dioxygena 96.2 0.026 8.9E-07 49.5 9.5 62 95-158 280-343 (368)
113 3cjx_A Protein of unknown func 96.2 0.019 6.5E-07 44.8 7.8 60 94-156 43-104 (165)
114 3gbg_A TCP pilus virulence reg 96.0 0.014 4.8E-07 46.6 6.7 56 99-155 15-72 (276)
115 3s7i_A Allergen ARA H 1, clone 96.0 0.01 3.6E-07 52.6 6.4 64 94-157 263-357 (418)
116 3kgl_A Cruciferin; 11S SEED gl 96.0 0.05 1.7E-06 49.1 10.7 31 96-126 45-77 (466)
117 2y0o_A Probable D-lyxose ketol 95.9 0.063 2.1E-06 42.6 9.8 61 94-154 53-141 (175)
118 3ebr_A Uncharacterized RMLC-li 95.9 0.025 8.7E-07 43.6 7.3 59 93-155 41-101 (159)
119 2q1z_B Anti-sigma factor CHRR, 95.7 0.031 1.1E-06 44.1 7.3 68 80-154 112-181 (195)
120 3o14_A Anti-ecfsigma factor, C 95.5 0.093 3.2E-06 42.5 9.5 58 94-157 43-102 (223)
121 3bal_A Acetylacetone-cleaving 94.9 0.17 5.9E-06 39.2 8.9 60 93-152 45-106 (153)
122 2wfp_A Mannose-6-phosphate iso 94.9 0.17 6E-06 44.3 10.0 67 94-162 324-391 (394)
123 3st7_A Capsular polysaccharide 94.6 0.094 3.2E-06 43.3 7.3 58 98-156 276-343 (369)
124 1pmi_A PMI, phosphomannose iso 93.5 0.54 1.8E-05 41.8 10.4 69 86-154 348-422 (440)
125 2gm6_A Cysteine dioxygenase ty 93.4 0.4 1.4E-05 38.4 8.6 79 68-146 51-142 (208)
126 1zx5_A Mannosephosphate isomer 93.4 0.7 2.4E-05 38.9 10.5 56 94-153 230-287 (300)
127 1qwr_A Mannose-6-phosphate iso 93.4 0.63 2.1E-05 39.4 10.2 52 94-148 251-303 (319)
128 3eqe_A Putative cystein deoxyg 91.7 0.79 2.7E-05 35.7 8.0 76 77-152 52-137 (171)
129 3fz3_A Prunin; TREE NUT allerg 90.7 2.2 7.5E-05 39.1 11.1 24 133-156 173-196 (531)
130 3bpz_A Potassium/sodium hyperp 89.9 0.4 1.4E-05 36.1 4.7 43 99-142 98-142 (202)
131 2vec_A YHAK, pirin-like protei 89.4 0.9 3.1E-05 37.6 6.8 44 104-148 75-120 (256)
132 2qjv_A Uncharacterized IOLB-li 88.9 2.9 9.9E-05 35.1 9.7 65 96-163 31-107 (270)
133 2vec_A YHAK, pirin-like protei 88.5 1.1 3.7E-05 37.1 6.7 57 101-158 189-247 (256)
134 2d93_A RAP guanine nucleotide 87.0 0.43 1.5E-05 33.2 3.0 39 103-142 47-87 (134)
135 3ocp_A PRKG1 protein; serine/t 86.8 0.9 3.1E-05 31.7 4.6 43 100-143 50-94 (139)
136 1tq5_A Protein YHHW; bicupin, 85.9 2.5 8.5E-05 34.5 7.4 47 104-151 52-100 (242)
137 2ptm_A Hyperpolarization-activ 85.2 1.2 4.3E-05 33.1 4.9 44 99-142 97-142 (198)
138 3pna_A CAMP-dependent protein 85.1 1.2 4.1E-05 31.8 4.6 44 98-142 63-108 (154)
139 3of1_A CAMP-dependent protein 83.3 1.4 4.9E-05 33.2 4.6 42 101-143 35-78 (246)
140 4f8a_A Potassium voltage-gated 82.9 1.8 6E-05 30.5 4.6 44 100-144 54-99 (160)
141 2pa7_A DTDP-6-deoxy-3,4-keto-h 82.8 4 0.00014 30.8 6.9 53 103-155 44-102 (141)
142 1tq5_A Protein YHHW; bicupin, 82.4 2.8 9.7E-05 34.1 6.3 40 113-158 182-221 (242)
143 2qdr_A Uncharacterized protein 81.3 8.6 0.00029 32.8 8.9 50 99-158 102-154 (303)
144 4gjz_A Lysine-specific demethy 81.3 0.86 2.9E-05 34.9 2.6 57 95-152 125-221 (235)
145 3uss_A Putative uncharacterize 80.9 8.9 0.00031 30.7 8.7 81 68-148 45-138 (211)
146 3o14_A Anti-ecfsigma factor, C 80.6 15 0.00051 29.4 9.9 66 80-154 133-201 (223)
147 3ukn_A Novel protein similar t 80.1 2.2 7.5E-05 32.1 4.6 43 100-143 102-146 (212)
148 1yud_A Hypothetical protein SO 77.7 4.3 0.00015 31.9 5.6 56 95-151 50-118 (170)
149 3eln_A Cysteine dioxygenase ty 75.9 13 0.00045 29.3 8.1 77 69-147 46-137 (200)
150 2qcs_B CAMP-dependent protein 75.7 3 0.0001 32.6 4.3 42 100-142 66-109 (291)
151 1yll_A PA5104, conserved hypot 75.2 2 6.9E-05 34.4 3.2 37 111-148 139-175 (200)
152 3mdp_A Cyclic nucleotide-bindi 75.0 3.9 0.00013 28.0 4.3 44 100-143 33-85 (142)
153 3of1_A CAMP-dependent protein 74.4 5 0.00017 30.1 5.1 41 102-142 154-196 (246)
154 3shr_A CGMP-dependent protein 74.4 3.2 0.00011 32.7 4.2 41 102-143 68-110 (299)
155 3ejk_A DTDP sugar isomerase; Y 74.4 24 0.00081 27.4 9.2 56 102-157 61-131 (174)
156 2p17_A Pirin-like protein; GK1 74.3 11 0.00037 31.2 7.5 43 111-157 187-234 (277)
157 2xdv_A MYC-induced nuclear ant 74.2 10 0.00035 33.5 7.8 59 96-154 141-221 (442)
158 1vp6_A CNBD, cyclic-nucleotide 72.5 4.2 0.00014 27.8 3.9 41 99-142 37-79 (138)
159 2yu1_A JMJC domain-containing 71.1 11 0.00036 33.7 7.1 54 98-152 200-286 (451)
160 1dgw_Y Canavalin; duplicated s 70.7 2.6 8.9E-05 30.0 2.5 22 134-155 8-29 (93)
161 1dgw_X Canavalin; duplicated s 70.5 3.8 0.00013 28.0 3.2 21 107-127 52-72 (79)
162 3bb6_A Uncharacterized protein 70.3 23 0.00079 26.5 7.8 43 112-154 39-87 (127)
163 2oz6_A Virulence factor regula 69.5 7.5 0.00026 28.5 5.0 42 102-143 19-66 (207)
164 1wgp_A Probable cyclic nucleot 68.6 2.5 8.6E-05 29.0 2.1 42 101-142 34-82 (137)
165 2fmy_A COOA, carbon monoxide o 68.3 9.3 0.00032 28.5 5.4 47 101-147 32-83 (220)
166 3dn7_A Cyclic nucleotide bindi 67.5 9.4 0.00032 27.8 5.2 44 100-143 34-83 (194)
167 3b02_A Transcriptional regulat 67.1 7 0.00024 28.7 4.4 33 111-143 16-52 (195)
168 2p17_A Pirin-like protein; GK1 66.5 9.8 0.00034 31.4 5.6 46 104-150 50-97 (277)
169 2z69_A DNR protein; beta barre 66.1 6.7 0.00023 27.1 4.0 44 99-142 38-87 (154)
170 1pcq_O Groes protein; chaperon 66.0 1.2 4.1E-05 32.1 -0.1 19 133-151 56-74 (97)
171 1ywk_A 4-deoxy-L-threo-5-hexos 65.7 6.6 0.00023 33.4 4.4 43 110-154 76-120 (289)
172 1o7f_A CAMP-dependent RAP1 gua 65.0 9.7 0.00033 32.0 5.4 43 100-142 365-409 (469)
173 1zyb_A Transcription regulator 64.3 6.7 0.00023 29.7 3.9 43 100-142 47-95 (232)
174 1qwr_A Mannose-6-phosphate iso 64.2 9 0.00031 32.2 5.0 40 110-150 115-176 (319)
175 1xru_A 4-deoxy-L-threo-5-hexos 64.0 7.5 0.00026 32.9 4.4 44 111-156 77-122 (282)
176 3ryp_A Catabolite gene activat 63.9 11 0.00037 27.6 4.9 42 102-143 25-72 (210)
177 3esg_A HUTD, putative uncharac 63.8 26 0.00088 27.9 7.4 49 111-160 65-115 (193)
178 1ft9_A Carbon monoxide oxidati 63.7 10 0.00035 28.4 4.8 44 100-143 27-75 (222)
179 3dl3_A Tellurite resistance pr 63.2 40 0.0014 24.9 7.9 46 114-159 40-91 (119)
180 3idb_B CAMP-dependent protein 62.9 10 0.00035 26.8 4.5 44 99-142 64-112 (161)
181 3fx3_A Cyclic nucleotide-bindi 61.9 14 0.00049 27.7 5.4 43 101-143 39-87 (237)
182 3dv8_A Transcriptional regulat 60.4 13 0.00046 27.3 4.9 43 101-143 31-79 (220)
183 3d0s_A Transcriptional regulat 60.3 13 0.00046 27.6 4.9 43 100-142 33-81 (227)
184 3iwz_A CAP-like, catabolite ac 60.3 12 0.00041 27.8 4.7 44 100-143 38-87 (230)
185 2pqq_A Putative transcriptiona 60.0 10 0.00035 25.9 3.9 43 100-142 32-80 (149)
186 4diq_A Lysine-specific demethy 59.6 42 0.0014 30.3 8.8 60 96-155 166-251 (489)
187 3al5_A HTYW5, JMJC domain-cont 59.4 5.2 0.00018 33.7 2.6 59 94-152 167-260 (338)
188 3kcc_A Catabolite gene activat 59.3 14 0.00048 28.6 5.1 45 99-143 72-122 (260)
189 3d8c_A Hypoxia-inducible facto 58.7 5.3 0.00018 33.8 2.6 57 98-154 187-283 (349)
190 1vrb_A Putative asparaginyl hy 58.4 15 0.0005 31.1 5.3 22 133-154 219-240 (342)
191 2zcw_A TTHA1359, transcription 57.9 12 0.00041 27.5 4.2 31 113-143 26-60 (202)
192 4f7z_A RAP guanine nucleotide 57.8 12 0.00041 35.4 5.1 31 112-142 379-409 (999)
193 2gau_A Transcriptional regulat 56.3 17 0.00057 27.2 4.9 43 100-142 37-85 (232)
194 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 56.2 51 0.0018 25.6 7.8 52 106-157 63-127 (185)
195 2qcs_B CAMP-dependent protein 55.1 20 0.00068 27.7 5.3 43 101-143 185-234 (291)
196 1j1l_A Pirin; beta sandwich, c 54.8 16 0.00053 30.6 4.8 47 104-151 51-100 (290)
197 2akl_A PHNA-like protein PA012 54.8 2.4 8.1E-05 32.5 -0.2 61 79-149 30-90 (138)
198 4ev0_A Transcription regulator 54.3 19 0.00064 26.4 4.8 43 101-143 27-75 (216)
199 3kv5_D JMJC domain-containing 53.9 14 0.00049 33.1 4.7 52 98-150 270-354 (488)
200 1o5l_A Transcriptional regulat 53.0 13 0.00045 27.7 3.8 43 100-142 26-74 (213)
201 3la7_A Global nitrogen regulat 52.7 19 0.00064 27.5 4.7 44 100-143 47-96 (243)
202 3e6c_C CPRK, cyclic nucleotide 51.3 22 0.00077 27.0 4.9 44 100-143 36-85 (250)
203 3gyd_A CNMP-BD protein, cyclic 50.4 16 0.00056 26.8 3.9 43 100-142 66-114 (187)
204 2ixk_A DTDP-4-dehydrorhamnose 49.8 68 0.0023 24.9 7.6 48 110-157 70-128 (184)
205 3e97_A Transcriptional regulat 49.8 17 0.00057 27.2 3.9 43 101-143 34-82 (231)
206 2qjv_A Uncharacterized IOLB-li 48.9 29 0.001 28.9 5.6 35 114-148 186-228 (270)
207 2bgc_A PRFA; bacterial infecti 47.2 29 0.001 26.2 5.0 34 111-144 35-71 (238)
208 4din_B CAMP-dependent protein 46.9 7.4 0.00025 32.6 1.6 41 101-142 158-200 (381)
209 3k3o_A PHF8, PHD finger protei 46.7 10 0.00035 33.1 2.6 52 98-150 151-235 (371)
210 3shr_A CGMP-dependent protein 45.7 33 0.0011 26.7 5.2 41 102-142 186-233 (299)
211 3k2o_A Bifunctional arginine d 45.3 12 0.0004 31.9 2.6 59 96-154 174-278 (336)
212 3pua_A GRC5, PHD finger protei 44.4 25 0.00087 30.8 4.7 18 133-150 245-262 (392)
213 1j1l_A Pirin; beta sandwich, c 44.4 46 0.0016 27.7 6.1 40 112-153 190-229 (290)
214 3kv4_A PHD finger protein 8; e 44.0 12 0.00041 33.4 2.6 51 99-150 236-319 (447)
215 3kmh_A D-lyxose isomerase; cup 42.9 68 0.0023 26.6 6.8 23 133-155 173-195 (246)
216 3ryk_A DTDP-4-dehydrorhamnose 42.8 95 0.0033 24.7 7.5 56 102-157 78-150 (205)
217 3kv9_A JMJC domain-containing 42.7 28 0.00096 30.6 4.7 18 133-150 246-263 (397)
218 4ava_A Lysine acetyltransferas 41.8 28 0.00096 27.7 4.3 41 102-142 42-87 (333)
219 3kmh_A D-lyxose isomerase; cup 41.4 65 0.0022 26.8 6.4 45 107-153 122-185 (246)
220 3pur_A Lysine-specific demethy 40.6 30 0.001 31.6 4.7 18 133-150 367-384 (528)
221 1wlt_A 176AA long hypothetical 39.0 1.1E+02 0.0038 24.0 7.4 46 112-157 89-145 (196)
222 1o7f_A CAMP-dependent RAP1 gua 36.4 34 0.0012 28.6 4.1 44 100-143 69-120 (469)
223 1yll_A PA5104, conserved hypot 35.7 73 0.0025 25.2 5.8 47 111-159 60-109 (200)
224 3cf6_E RAP guanine nucleotide 35.2 46 0.0016 30.7 5.1 43 100-142 60-104 (694)
225 3tnp_B CAMP-dependent protein 34.4 54 0.0018 27.7 5.1 43 100-142 294-348 (416)
226 1g31_A GP31; chaperone, CO-cha 33.9 13 0.00046 27.2 1.1 28 120-148 48-75 (111)
227 3dkw_A DNR protein; CRP-FNR, H 33.9 25 0.00086 25.9 2.6 44 100-143 36-85 (227)
228 4din_B CAMP-dependent protein 33.8 49 0.0017 27.4 4.7 31 112-142 289-324 (381)
229 1zx5_A Mannosephosphate isomer 33.7 19 0.00064 30.0 2.1 18 133-150 159-176 (300)
230 3anw_A GINS51, putative unchar 33.4 14 0.00048 28.9 1.2 32 114-146 137-169 (188)
231 1zx8_A Hypothetical protein TM 33.1 11 0.00037 28.5 0.4 37 109-149 50-86 (136)
232 1dzr_A DTDP-4-dehydrorhamnose 31.2 1.8E+02 0.0062 22.4 7.8 47 111-157 70-127 (183)
233 1oi6_A PCZA361.16; epimerase, 29.9 2E+02 0.007 22.6 8.2 46 112-157 71-127 (205)
234 3tnp_B CAMP-dependent protein 28.5 72 0.0025 26.9 4.9 41 102-142 174-219 (416)
235 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 27.5 1.2E+02 0.0041 23.9 5.7 55 103-157 69-134 (197)
236 2wfp_A Mannose-6-phosphate iso 27.4 34 0.0012 29.7 2.6 19 133-151 241-259 (394)
237 2k1g_A Lipoprotein SPR; soluti 27.4 17 0.00057 27.1 0.6 15 135-149 67-81 (135)
238 1xe7_A YML079WP, hypothetical 26.9 1.3E+02 0.0044 24.0 5.8 54 96-149 81-146 (203)
239 3dkq_A PKHD-type hydroxylase S 26.7 43 0.0015 27.2 3.0 36 121-159 147-182 (243)
240 2ypd_A Probable JMJC domain-co 24.1 53 0.0018 29.0 3.3 19 133-151 294-312 (392)
241 3jxo_A TRKA-N domain protein; 23.4 47 0.0016 21.4 2.3 27 115-144 43-69 (86)
242 1upi_A DTDP-4-dehydrorhamnose 23.2 2.9E+02 0.0099 22.1 8.5 46 112-157 90-146 (225)
243 2c0z_A NOVW; isomerase, epimer 22.5 2.9E+02 0.01 21.9 7.8 46 112-157 79-135 (216)
244 3tbm_A Putative uncharacterize 21.0 59 0.002 21.8 2.3 19 117-136 18-36 (69)
245 4f7z_A RAP guanine nucleotide 20.3 1.2E+02 0.004 28.6 5.1 47 96-142 64-119 (999)
246 1we3_O CPN10(groes); chaperoni 20.2 25 0.00087 25.2 0.4 14 133-146 61-74 (100)
247 3loi_A Putative uncharacterize 20.1 2.8E+02 0.0097 21.4 6.5 54 96-149 55-121 (172)
No 1
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=1.8e-27 Score=180.15 Aligned_cols=88 Identities=20% Similarity=0.280 Sum_probs=78.8
Q ss_pred cccCCCCeeecccccccccc-eeeEEEecCCceeeeeCCCc-eEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEE
Q 031109 74 CHTGGQPRVLPSKKTHLEAI-WRILRWGCPPSKFPWTYSDK-ETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCT 151 (165)
Q Consensus 74 ~~~~G~P~~~~~~~~~~~~~-~~~GiWe~~pg~f~w~y~~d-E~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~t 151 (165)
...+|+|....++. ++++ ..+|+|+|+||+|+|+|+.+ |+||||||+++|+++|| ++++|+|||+|+||+|++|+
T Consensus 23 ~r~~~~~~~~~~~~--~~~g~~~~GvWe~tPG~~~~~~~~~~E~~~iLeG~~~lt~ddG-~~~~l~aGD~~~~P~G~~gt 99 (116)
T 3es4_A 23 GRDGGSYRRQIWQD--DVENGTIVAVWMAEPGIYNYAGRDLEETFVVVEGEALYSQADA-DPVKIGPGSIVSIAKGVPSR 99 (116)
T ss_dssp TCSSCEEEEEEEEC--SSSSCCEEEEEEECSEEEEECCCSEEEEEEEEECCEEEEETTC-CCEEECTTEEEEECTTCCEE
T ss_pred eeecCcceEEEEee--CCCCCEEEEEEecCCceeECeeCCCcEEEEEEEeEEEEEeCCC-eEEEECCCCEEEECCCCeEE
Confidence 55677776665553 5666 89999999999999999877 99999999999999999 69999999999999999999
Q ss_pred EEEceeeEEEEEe
Q 031109 152 WDVSVGVDKHYKF 164 (165)
Q Consensus 152 W~V~e~vrK~Y~~ 164 (165)
|+|.++|||+|++
T Consensus 100 Wev~e~vrK~~~~ 112 (116)
T 3es4_A 100 LEILSSFRKLATV 112 (116)
T ss_dssp EEECSCEEEEEEE
T ss_pred EEEeEEEeEEEEE
Confidence 9999999999986
No 2
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=99.94 E-value=5.2e-27 Score=196.08 Aligned_cols=110 Identities=19% Similarity=0.272 Sum_probs=94.6
Q ss_pred eeEEecCCCcchhhhcccccCCCCcccCCCCeeecccccccccc-eeeEEEecCCce-eeeeCCCceEEEEEEcEEEEEe
Q 031109 50 GVKIERNPPESKLTELGVRQWPKHCHTGGQPRVLPSKKTHLEAI-WRILRWGCPPSK-FPWTYSDKETCYLLEGKVKVYP 127 (165)
Q Consensus 50 ~i~ie~~ps~~~l~~lGv~~Wp~~~~~~G~P~~~~~~~~~~~~~-~~~GiWe~~pg~-f~w~y~~dE~~yVLEG~vtVt~ 127 (165)
-+.|..++....-..+ +.+.+++|+|+++.+++|.++++ ..+|+|+|+||+ +.|+|+++|+||||||+++|++
T Consensus 127 ~~~i~~~~~l~P~~~p-----~p~~~l~G~P~~~~~~~~~~~~g~~~~GiW~~tpG~~~~~~~~~~E~~~ILeG~v~lt~ 201 (238)
T 3myx_A 127 ITALDRLALLTPSSPP-----DPSIMISPLPQCRSNNLFEDTASTLRIGVWDSTPYERISRPHKIHELMNLIEGRVVLSL 201 (238)
T ss_dssp EEEECTTCCCEEECCC-----CGGGBSSCCCCEEEEEEEECSSSSCEEEEEEECCEEBCCEECSSCEEEEEEECCEEEEE
T ss_pred cEEecCCCCCCCCCCC-----ChhheecCCchheeeEEEECCCCCEEEeEEEeCCCEEECCcCCCCEEEEEEEeEEEEEe
Confidence 4667666664332111 22478999999999999999887 899999999987 5688999999999999999999
Q ss_pred CCCceeEEEcCCcEEEEcCCCEEEEEEceeeEEEEEeC
Q 031109 128 DGSNEGVEIGAGDLVVFPKGMSCTWDVSVGVDKHYKFG 165 (165)
Q Consensus 128 dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~vrK~Y~~~ 165 (165)
++| ++++++|||+++||+|++|+|+|.+++||||+|.
T Consensus 202 ~~G-~~~~~~aGD~~~~P~G~~~tWev~e~vrK~Yvit 238 (238)
T 3myx_A 202 ENG-SSLTVNTGDTVFVAQGAPCKWTSTGYVRKFYAVT 238 (238)
T ss_dssp TTS-CEEEECTTCEEEECTTCEEEEEESSCEEEEEEEC
T ss_pred CCC-CEEEECCCCEEEECCCCEEEEEECccEEEEEEeC
Confidence 999 6999999999999999999999999999999983
No 3
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=99.89 E-value=2.3e-23 Score=157.31 Aligned_cols=91 Identities=19% Similarity=0.297 Sum_probs=85.8
Q ss_pred CcccCCCCeeecccccccccc-eeeEEEecCCceeeeeCCC-ceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEE
Q 031109 73 HCHTGGQPRVLPSKKTHLEAI-WRILRWGCPPSKFPWTYSD-KETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSC 150 (165)
Q Consensus 73 ~~~~~G~P~~~~~~~~~~~~~-~~~GiWe~~pg~f~w~y~~-dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~ 150 (165)
+.+++|+|.+..+++|.++++ ..+|+|+++|+.+.|+++. +|+||||+|+++|+.++| ++++++|||.++||+|..+
T Consensus 27 ~~~i~G~P~~~~~~~~~~~~g~~~~g~w~~~pG~~~~~~~~~~E~~~Vl~G~~~l~~~~g-~~~~l~~GD~~~ip~g~~h 105 (123)
T 3bcw_A 27 SRPIAGDASFRTVTAFEGGQGKVESGVWESTSGSFQSNTTGYIEYCHIIEGEARLVDPDG-TVHAVKAGDAFIMPEGYTG 105 (123)
T ss_dssp SSEEEECCCEEEEEEEEETTTTEEEEEEEEEEEEEECCCTTEEEEEEEEEEEEEEECTTC-CEEEEETTCEEEECTTCCC
T ss_pred ccEEcCCCCeeEEEEEeCCCCCEEEEEEEECCCceeeEcCCCcEEEEEEEEEEEEEECCC-eEEEECCCCEEEECCCCeE
Confidence 457899999999999988877 8999999999999999988 999999999999999877 6899999999999999999
Q ss_pred EEEEceeeEEEEEe
Q 031109 151 TWDVSVGVDKHYKF 164 (165)
Q Consensus 151 tW~V~e~vrK~Y~~ 164 (165)
+|++.+++||+|++
T Consensus 106 ~~~~~~~~rK~yv~ 119 (123)
T 3bcw_A 106 RWEVDRHVKKIYFV 119 (123)
T ss_dssp EEEEEEEEEEEEEE
T ss_pred EEEECCceeEEEEE
Confidence 99999999999986
No 4
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=99.73 E-value=2.8e-17 Score=137.26 Aligned_cols=89 Identities=13% Similarity=0.067 Sum_probs=78.6
Q ss_pred CcccCCCCeeeccccc-ccccceeeEEEecCCceee-eeCCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEE
Q 031109 73 HCHTGGQPRVLPSKKT-HLEAIWRILRWGCPPSKFP-WTYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSC 150 (165)
Q Consensus 73 ~~~~~G~P~~~~~~~~-~~~~~~~~GiWe~~pg~f~-w~y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~ 150 (165)
..+.+++|.......+ .++++..+|+|.+ .+++. +.|+.||+||||||+++|++ +| ++++++|||+++||+|+++
T Consensus 25 ~~~~~~dp~~~~r~~~~~~~~~~~~G~~~~-~g~~~v~~~p~dE~~~VleG~~~lt~-~g-~~~~~~~Gd~~~ip~G~~~ 101 (238)
T 3myx_A 25 GPIDAHDPFDSGRRTAFVDEQGIAAGIVEF-GTALSVEAYPYTEMLVMHRGSVTLTS-GT-DSVTLSTGESAVIGRGTQV 101 (238)
T ss_dssp SCSSTTCSCSTTEEEEEECTTSEEEEEEEE-CSEEEESSCSSEEEEEEEESEEEEEE-TT-EEEEEETTCEEEECTTCCE
T ss_pred cccCCCCccccceEEecCCCCCeEEEEEEe-ccccccccCCCcEEEEEEEeEEEEEC-CC-eEEEEcCCCEEEECCCCEE
Confidence 4678899999888655 4445599999999 77776 47999999999999999999 66 6999999999999999999
Q ss_pred EEEEceeeEEEEEe
Q 031109 151 TWDVSVGVDKHYKF 164 (165)
Q Consensus 151 tW~V~e~vrK~Y~~ 164 (165)
+|++.+++||+|+.
T Consensus 102 ~w~~~~~~~~~y~~ 115 (238)
T 3myx_A 102 RIDAQPESLWAFCA 115 (238)
T ss_dssp EEEECTTEEEEEEE
T ss_pred EEEecCCeEEEEEe
Confidence 99999999999974
No 5
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.72 E-value=4.4e-17 Score=123.84 Aligned_cols=88 Identities=26% Similarity=0.385 Sum_probs=77.8
Q ss_pred ccCCCCeeecccc--cccccc-eeeEEEecCCceeeeeCCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEE
Q 031109 75 HTGGQPRVLPSKK--THLEAI-WRILRWGCPPSKFPWTYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCT 151 (165)
Q Consensus 75 ~~~G~P~~~~~~~--~~~~~~-~~~GiWe~~pg~f~w~y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~t 151 (165)
++.|+|....+.. +...+. +.+|+|+.+|+.++||++.+|++|||+|+++|+.+| +.++++|||.++||+|..++
T Consensus 35 ~~~g~p~~~~~~~~L~~~~~~~~~~~~~~~~pG~~~~h~~~~E~~~VLeG~~~l~~~g--~~~~l~~GD~i~~p~g~~h~ 112 (133)
T 2pyt_A 35 FDGAEPHCVGLTDLVTEQDGSSMAAGFMQWDNAFFPWTLNYDEIDMVLEGELHVRHEG--ETMIAKAGDVMFIPKGSSIE 112 (133)
T ss_dssp CGGGTTSCCEEEEEECGGGTCSSEEEEEEEEEEEEEEECSSEEEEEEEEEEEEEEETT--EEEEEETTCEEEECTTCEEE
T ss_pred ccCCCCCceEEEEEEecCCCCcEEEEEEEECCCCccccCCCCEEEEEEECEEEEEECC--EEEEECCCcEEEECCCCEEE
Confidence 5678898877775 444444 789999999999999999999999999999999984 58999999999999999999
Q ss_pred EEEceeeEEEEEe
Q 031109 152 WDVSVGVDKHYKF 164 (165)
Q Consensus 152 W~V~e~vrK~Y~~ 164 (165)
|+..++++++|++
T Consensus 113 ~~~~~~~~~l~v~ 125 (133)
T 2pyt_A 113 FGTPTSVRFLYVA 125 (133)
T ss_dssp EEEEEEEEEEEEE
T ss_pred EEeCCCEEEEEEE
Confidence 9999999999985
No 6
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=99.69 E-value=2.2e-16 Score=115.04 Aligned_cols=85 Identities=46% Similarity=0.905 Sum_probs=78.2
Q ss_pred EecCCCcchhhhcccccCCCCcccCCCCeeecccccccccceeeEEEecCCceeeeeCCCceEEEEEEcEEEEEeCCCce
Q 031109 53 IERNPPESKLTELGVRQWPKHCHTGGQPRVLPSKKTHLEAIWRILRWGCPPSKFPWTYSDKETCYLLEGKVKVYPDGSNE 132 (165)
Q Consensus 53 ie~~ps~~~l~~lGv~~Wp~~~~~~G~P~~~~~~~~~~~~~~~~GiWe~~pg~f~w~y~~dE~~yVLEG~vtVt~dgG~e 132 (165)
++++.....|.+.|...++. |.++|+.++|+.+.+|++|||+|+++++.+++ +
T Consensus 16 ~~~~~~~~~l~~~g~~~~~~--------------------------~~~~pg~~~~hH~~~E~~~Vl~G~~~~~i~~g-~ 68 (101)
T 1o5u_A 16 KIEKPTPEKLKELSVEKWPI--------------------------WEKEVSEFDWYYDTNETCYILEGKVEVTTEDG-K 68 (101)
T ss_dssp EEECCCHHHHHHHTGGGSCE--------------------------EEECSEEEEEECSSCEEEEEEEEEEEEEETTC-C
T ss_pred EecCCCccEEeeCCceEEEE--------------------------EEeCCCcccccCCceEEEEEEeCEEEEEECCC-C
Confidence 56688889999988877766 99999999999889999999999999999856 5
Q ss_pred eEEEcCCcEEEEcCCCEEEEEEceeeEEEEEe
Q 031109 133 GVEIGAGDLVVFPKGMSCTWDVSVGVDKHYKF 164 (165)
Q Consensus 133 ~v~i~AGDlv~fPkG~~~tW~V~e~vrK~Y~~ 164 (165)
.++++|||+++||+|...+|...++++|+|+|
T Consensus 69 ~~~l~~GD~i~ip~g~~H~~~n~~~~~~~yv~ 100 (101)
T 1o5u_A 69 KYVIEKGDLVTFPKGLRCRWKVLEPVRKHYNL 100 (101)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEEEEEEEEE
T ss_pred EEEECCCCEEEECCCCcEEEEeCCCeeEEEEE
Confidence 89999999999999999999999999999987
No 7
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=99.64 E-value=1.4e-15 Score=119.11 Aligned_cols=89 Identities=21% Similarity=0.303 Sum_probs=78.0
Q ss_pred cccCCCCeeeccc--ccccccc--eeeEEEecCCceeeeeCCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCE
Q 031109 74 CHTGGQPRVLPSK--KTHLEAI--WRILRWGCPPSKFPWTYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMS 149 (165)
Q Consensus 74 ~~~~G~P~~~~~~--~~~~~~~--~~~GiWe~~pg~f~w~y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~ 149 (165)
.+..|+|....+. .+.++++ ..+|+|+++.+.++|+++.+|++|||||+++|+.+ | +.++++|||.++||+|..
T Consensus 42 r~~~G~p~~~v~i~~l~s~~~~~~~s~g~~~~e~~~~~~~~~~eE~~yVLeG~~~l~i~-g-~~~~l~~GD~i~iP~G~~ 119 (151)
T 4axo_A 42 RLDTGNPSDVVYTKDLFTLEESPRLGCGMMEMKETTFDWTLNYDEIDYVIDGTLDIIID-G-RKVSASSGELIFIPKGSK 119 (151)
T ss_dssp BCCCSCTTCCEEEEECSCTTTCSSCEEEEEEEEEEEEEEECSSEEEEEEEEEEEEEEET-T-EEEEEETTCEEEECTTCE
T ss_pred ccccCCCCCCEEEEEeecCCCCCcEEEEEEEEcCccccEeCCCcEEEEEEEeEEEEEEC-C-EEEEEcCCCEEEECCCCE
Confidence 3566888777766 6666654 78999999988899999999999999999999985 4 589999999999999999
Q ss_pred EEEEEceeeEEEEEe
Q 031109 150 CTWDVSVGVDKHYKF 164 (165)
Q Consensus 150 ~tW~V~e~vrK~Y~~ 164 (165)
++|...++++++|++
T Consensus 120 h~~~n~~~a~~l~V~ 134 (151)
T 4axo_A 120 IQFSVPDYARFIYVT 134 (151)
T ss_dssp EEEEEEEEEEEEEEE
T ss_pred EEEEeCCCEEEEEEE
Confidence 999999999999975
No 8
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.39 E-value=4.4e-12 Score=94.22 Aligned_cols=69 Identities=28% Similarity=0.365 Sum_probs=62.9
Q ss_pred eeeEEEecCCce-eeeeCCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEc-eeeEEEEEe
Q 031109 94 WRILRWGCPPSK-FPWTYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVS-VGVDKHYKF 164 (165)
Q Consensus 94 ~~~GiWe~~pg~-f~w~y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~-e~vrK~Y~~ 164 (165)
..+|+|..+||. ++||++.+|++|||||+++|+.+ | +.++++|||.++||+|...+|... ++.+++|++
T Consensus 40 ~~~~~~~~~pG~~~~~H~~~~E~~~Vl~G~~~~~~~-g-~~~~l~~GD~v~ip~g~~H~~~~~~~~~~~l~v~ 110 (119)
T 3lwc_A 40 ITIGYGRYAPGQSLTETMAVDDVMIVLEGRLSVSTD-G-ETVTAGPGEIVYMPKGETVTIRSHEEGALTAYVT 110 (119)
T ss_dssp CEEEEEEECTTCEEEEECSSEEEEEEEEEEEEEEET-T-EEEEECTTCEEEECTTCEEEEEEEEEEEEEEEEE
T ss_pred EEEEEEEECCCCCcCccCCCCEEEEEEeCEEEEEEC-C-EEEEECCCCEEEECCCCEEEEEcCCCCeEEEEEE
Confidence 678999999996 67899999999999999999995 4 589999999999999999999988 789999875
No 9
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=98.58 E-value=3.2e-07 Score=66.07 Aligned_cols=65 Identities=14% Similarity=0.162 Sum_probs=52.4
Q ss_pred ccceeeEEEecCCce-eeeeCC--CceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEce
Q 031109 91 EAIWRILRWGCPPSK-FPWTYS--DKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 91 ~~~~~~GiWe~~pg~-f~w~y~--~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
.+...+..+...|+. .++|+. .+|++|||+|+++++.+++ +.+.+++||+++||+|....+....
T Consensus 36 ~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~~-~~~~l~~Gd~~~i~~~~~H~~~n~~ 103 (125)
T 3h8u_A 36 TNDSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQGNG-IVTHLKAGDIAIAKPGQVHGAMNSG 103 (125)
T ss_dssp CSSCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECSTT-CEEEEETTEEEEECTTCCCEEEECS
T ss_pred CCCEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEECCC-eEEEeCCCCEEEECCCCEEEeEeCC
Confidence 334667778888877 456643 4899999999999999555 5899999999999999999988754
No 10
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=98.57 E-value=1.3e-07 Score=66.63 Aligned_cols=57 Identities=19% Similarity=0.331 Sum_probs=46.7
Q ss_pred CCceeeeeC-CC-ceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEceeeE
Q 031109 102 PPSKFPWTY-SD-KETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVGVD 159 (165)
Q Consensus 102 ~pg~f~w~y-~~-dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~vr 159 (165)
.|+.++||+ +. +|++|||+|+++++.+++ +.+.+++||+++||+|....+...+..+
T Consensus 36 ~~g~~~~H~H~~~~E~~~Vl~G~~~~~~~~~-~~~~l~~Gd~~~ip~~~~H~~~~~~~~~ 94 (107)
T 2i45_A 36 LLGDYGWHTHGYSDKVLFAVEGDMAVDFADG-GSMTIREGEMAVVPKSVSHRPRSENGCS 94 (107)
T ss_dssp EEEECCCBCC--CCEEEEESSSCEEEEETTS-CEEEECTTEEEEECTTCCEEEEEEEEEE
T ss_pred CCCCCcceeCCCCCEEEEEEeCEEEEEECCC-cEEEECCCCEEEECCCCcEeeEeCCCeE
Confidence 355566665 34 899999999999999984 3799999999999999999998876654
No 11
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=98.57 E-value=7.8e-07 Score=62.81 Aligned_cols=70 Identities=11% Similarity=0.154 Sum_probs=56.9
Q ss_pred ccceeeEEEecCCce-eeeeC-CCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEceeeEEEE
Q 031109 91 EAIWRILRWGCPPSK-FPWTY-SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVGVDKHY 162 (165)
Q Consensus 91 ~~~~~~GiWe~~pg~-f~w~y-~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~vrK~Y 162 (165)
.+...+......|+. +++|+ +..|++|||+|++++..++. .+.+++||+++||+|....+...+..+-..
T Consensus 37 ~~~~~~~~~~~~~g~~~~~H~H~~~e~~~vl~G~~~~~~~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~ 108 (115)
T 1yhf_A 37 RQDLGITVFSLDKGQEIGRHSSPGDAMVTILSGLAEITIDQE--TYRVAEGQTIVMPAGIPHALYAVEAFQMLL 108 (115)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSSEEEEEEEESEEEEEETTE--EEEEETTCEEEECTTSCEEEEESSCEEEEE
T ss_pred CCceEEEEEEECCCCccCCEECCCcEEEEEEeCEEEEEECCE--EEEECCCCEEEECCCCCEEEEECCCceEEE
Confidence 344667777777776 56664 57999999999999999874 799999999999999999999887654433
No 12
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=98.57 E-value=6.1e-07 Score=64.90 Aligned_cols=69 Identities=22% Similarity=0.263 Sum_probs=56.4
Q ss_pred ccceeeEEEecCCce-eeee-CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEceeeEEE
Q 031109 91 EAIWRILRWGCPPSK-FPWT-YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVGVDKH 161 (165)
Q Consensus 91 ~~~~~~GiWe~~pg~-f~w~-y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~vrK~ 161 (165)
.+...+-.+...|+. .++| .+.+|++|||+|+++++.++. .+.+++||+++||+|....+...+..+-.
T Consensus 33 ~~~~~v~~~~l~~G~~~~~H~H~~~e~~~Vl~G~~~~~i~~~--~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~ 103 (114)
T 3fjs_A 33 EHRLEVMRMVLPAGKQVGSHSVAGPSTIQCLEGEVEIGVDGA--QRRLHQGDLLYLGAGAAHDVNAITNTSLL 103 (114)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSSCEEEEEEESCEEEEETTE--EEEECTTEEEEECTTCCEEEEESSSEEEE
T ss_pred CCCEEEEEEEECCCCccCceeCCCcEEEEEEECEEEEEECCE--EEEECCCCEEEECCCCcEEEEeCCCcEEE
Confidence 344677778888877 4566 356899999999999999874 79999999999999999999988765433
No 13
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=98.54 E-value=9.3e-07 Score=62.50 Aligned_cols=68 Identities=16% Similarity=0.049 Sum_probs=55.7
Q ss_pred ceeeEEEecCCce-eeeeC-CCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEceeeEEEE
Q 031109 93 IWRILRWGCPPSK-FPWTY-SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVGVDKHY 162 (165)
Q Consensus 93 ~~~~GiWe~~pg~-f~w~y-~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~vrK~Y 162 (165)
...+..+...|+. .++|+ +..|++|||+|+++++.++ +.+.+++||++++|+|....+...++.+-..
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~--~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l~ 102 (116)
T 2pfw_A 33 ELMAVKIWFDKGAEGYVHAHRHSQVSYVVEGEFHVNVDG--VIKVLTAGDSFFVPPHVDHGAVCPTGGILID 102 (116)
T ss_dssp TEEEEEEEECTTEEEEEECCSSEEEEEEEEECEEEEETT--EEEEECTTCEEEECTTCCEEEEESSCEEEEE
T ss_pred ceEEEEEEECCCCcCCcEECCcceEEEEEeeEEEEEECC--EEEEeCCCCEEEECcCCceeeEeCCCcEEEE
Confidence 3667778888876 45664 5799999999999999966 4799999999999999999999887664443
No 14
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=98.52 E-value=1e-06 Score=60.04 Aligned_cols=63 Identities=17% Similarity=0.132 Sum_probs=52.0
Q ss_pred cceeeEEEecCCce-eeeeC-C-CceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEce
Q 031109 92 AIWRILRWGCPPSK-FPWTY-S-DKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 92 ~~~~~GiWe~~pg~-f~w~y-~-~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
+...+..+...|+. .++|+ + .+|++|||+|++++..++ +.+.+++||++++|+|....+....
T Consensus 26 ~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~~~--~~~~l~~Gd~~~ip~~~~H~~~~~~ 91 (105)
T 1v70_A 26 ERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVGE--EEALLAPGMAAFAPAGAPHGVRNES 91 (105)
T ss_dssp TTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEETT--EEEEECTTCEEEECTTSCEEEECCS
T ss_pred CceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEECC--EEEEeCCCCEEEECCCCcEEeEeCC
Confidence 34677778887776 56775 3 478999999999999986 4799999999999999999998754
No 15
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=98.48 E-value=1.6e-06 Score=61.47 Aligned_cols=64 Identities=11% Similarity=0.140 Sum_probs=50.4
Q ss_pred eeeEEEecCCce-eeee-CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEceeeE
Q 031109 94 WRILRWGCPPSK-FPWT-YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVGVD 159 (165)
Q Consensus 94 ~~~GiWe~~pg~-f~w~-y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~vr 159 (165)
..+.++...|+. ++.| .+.+|++|||+|+++++.++. .+.+++||+++||+|....+...++.+
T Consensus 38 ~~~~~~~~~~g~~~~~H~h~~~e~~~vl~G~~~~~i~~~--~~~l~~Gd~i~i~~~~~H~~~~~~~~~ 103 (114)
T 2ozj_A 38 VQISLFSFADGESVSEEEYFGDTLYLILQGEAVITFDDQ--KIDLVPEDVLMVPAHKIHAIAGKGRFK 103 (114)
T ss_dssp EEEEEEEEETTSSCCCBCCSSCEEEEEEEEEEEEEETTE--EEEECTTCEEEECTTCCBEEEEEEEEE
T ss_pred ceEEEEEECCCCccccEECCCCeEEEEEeCEEEEEECCE--EEEecCCCEEEECCCCcEEEEeCCCcE
Confidence 444555555554 4444 467999999999999999764 799999999999999999998876654
No 16
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=98.47 E-value=1.4e-06 Score=60.61 Aligned_cols=67 Identities=16% Similarity=0.258 Sum_probs=53.9
Q ss_pred cceeeEEEecCCce-eeeeCCC--ceE-EEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEceeeE
Q 031109 92 AIWRILRWGCPPSK-FPWTYSD--KET-CYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVGVD 159 (165)
Q Consensus 92 ~~~~~GiWe~~pg~-f~w~y~~--dE~-~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~vr 159 (165)
+.+.+..+...|+. .++|+.. .|+ +|||+|++++..+++ +.+.+++||+++||+|....+...+..+
T Consensus 31 ~~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~~-~~~~l~~Gd~~~ip~~~~H~~~~~~~~~ 101 (110)
T 2q30_A 31 ENFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDGD-AVIPAPRGAVLVAPISTPHGVRAVTDMK 101 (110)
T ss_dssp SSCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGGG-CEEEECTTEEEEEETTSCEEEEESSSEE
T ss_pred CCEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeCCC-EEEEECCCCEEEeCCCCcEEEEEcCCcE
Confidence 34667778877775 5677543 587 799999999999744 4799999999999999999998877654
No 17
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=98.45 E-value=4.2e-07 Score=63.51 Aligned_cols=65 Identities=14% Similarity=0.190 Sum_probs=51.4
Q ss_pred cceeeEEEecCCce-eeeeC-CC-ceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEce
Q 031109 92 AIWRILRWGCPPSK-FPWTY-SD-KETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 92 ~~~~~GiWe~~pg~-f~w~y-~~-dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
..+.+..+.-.|+. .+||. +. +|+.|||+|+++++.++|.+.+.+++||.+.||+|....+.-..
T Consensus 16 ~~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~g~~~~~l~~Gd~~~~p~~~~H~~~N~g 83 (97)
T 2fqp_A 16 ERVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPEGSVTSQLTRGVSYTRPEGVEHNVINPS 83 (97)
T ss_dssp SSEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEETTEEEEEEECTTCCEEECTTCEEEEECCS
T ss_pred CeEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeCCCCEEEEEcCCCEEEeCCCCcccCEeCC
Confidence 34667778888876 44653 33 46999999999999988523799999999999999999987654
No 18
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=98.44 E-value=1.8e-06 Score=59.22 Aligned_cols=54 Identities=22% Similarity=0.450 Sum_probs=45.4
Q ss_pred ceeeeeC-CC-ceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEceeeE
Q 031109 104 SKFPWTY-SD-KETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVGVD 159 (165)
Q Consensus 104 g~f~w~y-~~-dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~vr 159 (165)
+.+++|+ +. .|++||++|++++..++. .+.+++||+++||+|....+...+..+
T Consensus 40 ~~~~~H~H~~~~e~~~v~~G~~~~~~~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~ 95 (102)
T 3d82_A 40 GEFVWHEHADTDEVFIVMEGTLQIAFRDQ--NITLQAGEMYVIPKGVEHKPMAKEECK 95 (102)
T ss_dssp EECCCBCCTTCCEEEEEEESEEEEECSSC--EEEEETTEEEEECTTCCBEEEEEEEEE
T ss_pred CCCCceeCCCCcEEEEEEeCEEEEEECCE--EEEEcCCCEEEECCCCeEeeEcCCCCE
Confidence 4566664 34 899999999999999875 799999999999999999988776543
No 19
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=98.43 E-value=1.4e-06 Score=62.50 Aligned_cols=63 Identities=13% Similarity=0.113 Sum_probs=53.4
Q ss_pred ceeeEEEecCCce-eeeeC-CCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEcee
Q 031109 93 IWRILRWGCPPSK-FPWTY-SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVG 157 (165)
Q Consensus 93 ~~~~GiWe~~pg~-f~w~y-~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~ 157 (165)
...+..+...|+. .++|+ +..|++|||+|+++++.++. .+.+++||+++||+|....+...+.
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~ 104 (126)
T 4e2g_A 40 NLMLNWVRIEPNTEMPAHEHPHEQAGVMLEGTLELTIGEE--TRVLRPGMAYTIPGGVRHRARTFED 104 (126)
T ss_dssp SCEEEEEEECTTCEEEEECCSSEEEEEEEEECEEEEETTE--EEEECTTEEEEECTTCCEEEECCTT
T ss_pred CeEEEEEEECCCCcCCCccCCCceEEEEEEeEEEEEECCE--EEEeCCCCEEEECCCCcEEeEECCC
Confidence 4677778888877 56664 46999999999999999874 7999999999999999999987665
No 20
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.42 E-value=2.4e-06 Score=68.72 Aligned_cols=75 Identities=9% Similarity=0.119 Sum_probs=60.5
Q ss_pred ccccccccceeeEEEecCCce-eeee-CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEceeeEEE
Q 031109 85 SKKTHLEAIWRILRWGCPPSK-FPWT-YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVGVDKH 161 (165)
Q Consensus 85 ~~~~~~~~~~~~GiWe~~pg~-f~w~-y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~vrK~ 161 (165)
.+.....+...+-++.-.||+ ++.| ++.+|+.|||||+++++.+|. ...++|||.+++|+|....+...+..+-+
T Consensus 28 sr~l~~~~~~~~~~~~~~~G~~~~~h~h~~~~~~~Vl~G~~~~~i~~~--~~~l~~Gd~~~~p~~~~H~~~a~~~~~~l 104 (227)
T 3rns_A 28 SMRILNQPNSYISLFSLAKDEEITAEAMLGNRYYYCFNGNGEIFIENN--KKTISNGDFLEITANHNYSIEARDNLKLI 104 (227)
T ss_dssp EEEEEECSSEEEEEEEECTTCEEEECSCSSCEEEEEEESEEEEEESSC--EEEEETTEEEEECSSCCEEEEESSSEEEE
T ss_pred EEehhcCCCcEEEEEEECCCCccCccccCCCEEEEEEeCEEEEEECCE--EEEECCCCEEEECCCCCEEEEECCCcEEE
Confidence 344444445677888888888 4555 789999999999999999864 79999999999999999999887765433
No 21
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=98.39 E-value=1.9e-06 Score=62.38 Aligned_cols=49 Identities=12% Similarity=0.166 Sum_probs=42.4
Q ss_pred eeCCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEce
Q 031109 108 WTYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 108 w~y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
++.+.+|+.|||+|+++++.+++.+.+.+++||.++||+|....+.-..
T Consensus 49 ~~~~~~E~~~Vl~G~~~l~~~~~~~~~~l~~Gd~i~ipa~~~H~~~n~~ 97 (112)
T 2opk_A 49 YDSPQDEWVMVVSGSAGIECEGDTAPRVMRPGDWLHVPAHCRHRVAWTD 97 (112)
T ss_dssp BCCSSEEEEEEEESCEEEEETTCSSCEEECTTEEEEECTTCCEEEEEEC
T ss_pred ccCCccEEEEEEeCeEEEEECCEEEEEEECCCCEEEECCCCcEEEEeCC
Confidence 4567899999999999999988621299999999999999999988765
No 22
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=98.38 E-value=1.1e-06 Score=66.36 Aligned_cols=60 Identities=23% Similarity=0.306 Sum_probs=49.9
Q ss_pred eeeEEEecCCce--eeee--CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCC-CEEEEEEc
Q 031109 94 WRILRWGCPPSK--FPWT--YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKG-MSCTWDVS 155 (165)
Q Consensus 94 ~~~GiWe~~pg~--f~w~--y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG-~~~tW~V~ 155 (165)
+.+.++...|+. .++| -..+|++|||+|+++++.++. .+++++||+++||+| ....|.-.
T Consensus 46 ~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~~~--~~~l~~Gd~i~i~~~~~~H~~~n~ 110 (162)
T 3l2h_A 46 MGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTMEND--QYPIAPGDFVGFPCHAAAHSISND 110 (162)
T ss_dssp EEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEETTE--EEEECTTCEEEECTTSCCEEEECC
T ss_pred EEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEECCE--EEEeCCCCEEEECCCCceEEeEeC
Confidence 456678888887 3555 357999999999999999874 799999999999998 88888763
No 23
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=98.38 E-value=2.5e-06 Score=60.73 Aligned_cols=63 Identities=11% Similarity=0.125 Sum_probs=50.1
Q ss_pred ceeeEEEecCCce-eeee-CCCceEEEEEEcEEEEEeCCCceeE-EEcCCcEEEEcCCCEEEEEEcee
Q 031109 93 IWRILRWGCPPSK-FPWT-YSDKETCYLLEGKVKVYPDGSNEGV-EIGAGDLVVFPKGMSCTWDVSVG 157 (165)
Q Consensus 93 ~~~~GiWe~~pg~-f~w~-y~~dE~~yVLEG~vtVt~dgG~e~v-~i~AGDlv~fPkG~~~tW~V~e~ 157 (165)
.+.+..+...|+. .++| .+..|++|||+|+++++.++. .. .+++||+++||+|....+.....
T Consensus 26 ~~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i~~~--~~~~l~~Gd~i~ip~~~~H~~~~~~~ 91 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPKHYSNSYVHLIIIKGEMTLTLEDQ--EPHNYKEGNIVYVPFNVKMLIQNINS 91 (117)
T ss_dssp SCEEEEEEEETTCBCCCEECSSCEEEEEEESEEEEEETTS--CCEEEETTCEEEECTTCEEEEECCSS
T ss_pred ceEEEEEEECCCCcCCCEeCCCcEEEEEEeCEEEEEECCE--EEEEeCCCCEEEECCCCcEEeEcCCC
Confidence 3455566666665 4455 367999999999999999886 46 99999999999999999887543
No 24
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=98.35 E-value=2e-06 Score=62.81 Aligned_cols=63 Identities=13% Similarity=0.132 Sum_probs=56.5
Q ss_pred eeeEEEecCCceeeeeCCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEceee
Q 031109 94 WRILRWGCPPSKFPWTYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVGV 158 (165)
Q Consensus 94 ~~~GiWe~~pg~f~w~y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~v 158 (165)
-++|+ +.||.|.+.....|+|.|++|+++|..+|..+-.+++|||.|.+|++.+..|+|.+++
T Consensus 25 ~TvGV--m~pGeytF~T~~~E~M~vvsG~~~V~lpg~~ew~~~~aGesF~Vpans~F~l~v~~~~ 87 (94)
T 2oyz_A 25 VSVGV--MLPGEYTFGTQAPERMTVVKGALVVKRVGEADWTTYSSGESFDVEGNSSFELQVKDAT 87 (94)
T ss_dssp EEEEE--ECSEEEEEEESSCEEEEEEESEEEEEETTCSSCEEEETTCEEEECSSEEEEEEESSCE
T ss_pred EEEEE--EeceEEEEcCCCeEEEEEEEeEEEEEcCCCCcCEEECCCCEEEECCCCEEEEEEcccE
Confidence 45676 4678888888999999999999999999886789999999999999999999999875
No 25
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=98.34 E-value=2.3e-06 Score=65.83 Aligned_cols=60 Identities=18% Similarity=0.237 Sum_probs=50.2
Q ss_pred eeeEEEecCCcee--eeeC--CCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCC--CEEEEEEc
Q 031109 94 WRILRWGCPPSKF--PWTY--SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKG--MSCTWDVS 155 (165)
Q Consensus 94 ~~~GiWe~~pg~f--~w~y--~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG--~~~tW~V~ 155 (165)
+.+.++...|+.. ++|+ ..+|++|||+|+++++.++. .+.+++||+++||+| ....+...
T Consensus 43 ~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~~~--~~~l~~GD~i~ip~~~~~~H~~~n~ 108 (163)
T 3i7d_A 43 FGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDDQG--EHPMVPGDCAAFPAGDPNGHQFVNR 108 (163)
T ss_dssp EEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEETTE--EEEECTTCEEEECTTCCCCBEEECC
T ss_pred EEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEECCE--EEEeCCCCEEEECCCCCcceEEEEC
Confidence 6778889888872 3453 34799999999999999874 799999999999999 88888763
No 26
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=98.33 E-value=3.3e-06 Score=58.61 Aligned_cols=62 Identities=13% Similarity=0.146 Sum_probs=51.2
Q ss_pred ceeeEEEecCCce-eeee--C-C-CceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEce
Q 031109 93 IWRILRWGCPPSK-FPWT--Y-S-DKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 93 ~~~~GiWe~~pg~-f~w~--y-~-~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
...+..+...|+. .++| + + ..|++|||+|+++++.++. .+.+++||+++||+|....+....
T Consensus 20 ~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~~~~--~~~l~~Gd~~~i~~~~~H~~~~~~ 86 (113)
T 2gu9_A 20 QVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVDGH--TQALQAGSLIAIERGQAHEIRNTG 86 (113)
T ss_dssp TEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEETTE--EEEECTTEEEEECTTCCEEEECCS
T ss_pred cEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEECCE--EEEeCCCCEEEECCCCcEEeEcCC
Confidence 3667778888876 4555 4 3 6899999999999999864 799999999999999999988653
No 27
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.33 E-value=4.1e-06 Score=67.32 Aligned_cols=76 Identities=13% Similarity=0.105 Sum_probs=61.5
Q ss_pred cccccccceeeEEEecCCcee-eee-CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEE-ceeeEEEE
Q 031109 86 KKTHLEAIWRILRWGCPPSKF-PWT-YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDV-SVGVDKHY 162 (165)
Q Consensus 86 ~~~~~~~~~~~GiWe~~pg~f-~w~-y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V-~e~vrK~Y 162 (165)
+.+.+.+...+.++.-.|+.. ++| .+.+|+.|||+|+++++.+|. .+.+++||.+++|+|....+.. .++.+-..
T Consensus 145 ~~l~~~~~~~~~~~~~~~G~~~~~H~H~~~e~~~Vl~G~~~~~i~g~--~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~ll 222 (227)
T 3rns_A 145 KNLVAKPNLVMTIMSFWKGESLDPHKAPGDALVTVLDGEGKYYVDGK--PFIVKKGESAVLPANIPHAVEAETENFKMLL 222 (227)
T ss_dssp EEEEEETTEEEEEEEECTTCEEEEECCSSEEEEEEEEEEEEEEETTE--EEEEETTEEEEECTTSCEEEECCSSCEEEEE
T ss_pred EEEEECCCeEEEEEEECCCCccCCEECCCcEEEEEEeEEEEEEECCE--EEEECCCCEEEECCCCcEEEEeCCCCEEEEE
Confidence 344445557788999998874 555 456899999999999999864 7999999999999999999988 77766554
Q ss_pred E
Q 031109 163 K 163 (165)
Q Consensus 163 ~ 163 (165)
+
T Consensus 223 ~ 223 (227)
T 3rns_A 223 I 223 (227)
T ss_dssp E
T ss_pred E
Confidence 3
No 28
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=98.30 E-value=2.3e-06 Score=62.35 Aligned_cols=61 Identities=20% Similarity=0.450 Sum_probs=50.3
Q ss_pred eeeEEEecCCce-eeeeC-CCceEEEEEEcEEEEE--eCCCceeEEEcCCcEEEEcCCCEEEEEEce
Q 031109 94 WRILRWGCPPSK-FPWTY-SDKETCYLLEGKVKVY--PDGSNEGVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 94 ~~~GiWe~~pg~-f~w~y-~~dE~~yVLEG~vtVt--~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
+.+..+...|+. +++|+ +..|++|||+|++++. .++ +.+++++||+++||+|....+....
T Consensus 39 ~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~~~--~~~~l~~Gd~~~ip~~~~H~~~~~~ 103 (145)
T 3ht1_A 39 FVLTEFEVSPNGSTPPHFHEWEHEIYVLEGSMGLVLPDQG--RTEEVGPGEAIFIPRGEPHGFVTGP 103 (145)
T ss_dssp EEEEEEEEEEEEECCCEECSSCEEEEEEEECEEEEEGGGT--EEEEECTTCEEEECTTCCBEEECCT
T ss_pred EEEEEEEECCCCcCCCccCCCceEEEEEEeEEEEEEeECC--EEEEECCCCEEEECCCCeEEeEcCC
Confidence 566778887876 45663 5688899999999999 765 4899999999999999999988743
No 29
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=98.29 E-value=7.2e-06 Score=59.70 Aligned_cols=61 Identities=10% Similarity=0.161 Sum_probs=50.7
Q ss_pred eeeEEEecCCce-eeeeC-CCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEce
Q 031109 94 WRILRWGCPPSK-FPWTY-SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 94 ~~~GiWe~~pg~-f~w~y-~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
+.+..+...|+. +++|+ +..|++|||+|++++..++. .+.+++||+++||+|....+....
T Consensus 48 ~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i~~~--~~~l~~Gd~i~ip~g~~H~~~~~~ 110 (126)
T 1vj2_A 48 FVMRLFTVEPGGLIDRHSHPWEHEIFVLKGKLTVLKEQG--EETVEEGFYIFVEPNEIHGFRNDT 110 (126)
T ss_dssp EEEEEEEEEEEEEEEEECCSSCEEEEEEESEEEEECSSC--EEEEETTEEEEECTTCCEEEECCS
T ss_pred EEEEEEEECCCCcCCceeCCCcEEEEEEEeEEEEEECCE--EEEECCCCEEEECCCCcEEeEeCC
Confidence 566667777765 55664 57999999999999999875 799999999999999999988654
No 30
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=98.29 E-value=4e-06 Score=69.22 Aligned_cols=69 Identities=10% Similarity=0.110 Sum_probs=59.2
Q ss_pred eeeEEEecCCce-eeee-CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEce-eeEEEEE
Q 031109 94 WRILRWGCPPSK-FPWT-YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSV-GVDKHYK 163 (165)
Q Consensus 94 ~~~GiWe~~pg~-f~w~-y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e-~vrK~Y~ 163 (165)
..+|+|...|+. +|+| -+.+|++|||+|++.++.+++ +...+++||.+++|.|....+...+ ++.-.|+
T Consensus 132 l~lG~v~l~PG~~yP~HsHp~EEiy~VLsG~~e~~v~~g-~~~~l~pGd~v~ipsgv~Ha~rt~dePllalwv 203 (217)
T 4b29_A 132 LRVTVGYWGPGLDYGWHEHLPEELYSVVSGRALFHLRNA-PDLMLEPGQTRFHPANAPHAMTTLTDPILTLVL 203 (217)
T ss_dssp CEEEEEEECSSCEEEEEECSSEEEEEEEEECEEEEETTS-CCEEECTTCEEEECTTCCEEEECCSSCEEEEEE
T ss_pred EEEEEEEECCCCcCCCCCCCCceEEEEEeCCEEEEECCC-CEEecCCCCEEEcCCCCceeEEECCccEEEEEE
Confidence 577999999998 6787 468999999999999999977 6899999999999999999887544 5666665
No 31
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.28 E-value=1.9e-06 Score=74.00 Aligned_cols=56 Identities=21% Similarity=0.397 Sum_probs=49.5
Q ss_pred eeCCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEceeeEEEEEe
Q 031109 108 WTYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVGVDKHYKF 164 (165)
Q Consensus 108 w~y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~vrK~Y~~ 164 (165)
++.+.+|++|||||+++|+.+|. +.++++|||.+++|+|...++...+..++++.+
T Consensus 268 h~~~~~~~~~vleG~~~i~i~g~-~~~~l~~Gd~~~iPag~~h~~~~~~~~~~~l~~ 323 (350)
T 1juh_A 268 WSFPGACAFQVQEGRVVVQIGDY-AATELGSGDVAFIPGGVEFKYYSEAYFSKVLFV 323 (350)
T ss_dssp BCCSSCEEEEEEESCEEEEETTS-CCEEECTTCEEEECTTCCEEEEESSSSEEEEEE
T ss_pred ccCCCcEEEEEEeeEEEEEECCe-EEEEeCCCCEEEECCCCCEEEEecCCeEEEEEE
Confidence 34789999999999999999985 479999999999999999999998776776654
No 32
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=98.27 E-value=7.4e-06 Score=64.77 Aligned_cols=77 Identities=10% Similarity=-0.067 Sum_probs=60.4
Q ss_pred ccccccccc-eeeEEEecCC-ce--ee-eeCCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEce--e
Q 031109 85 SKKTHLEAI-WRILRWGCPP-SK--FP-WTYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSV--G 157 (165)
Q Consensus 85 ~~~~~~~~~-~~~GiWe~~p-g~--f~-w~y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e--~ 157 (165)
...|....+ +..++=+..| +. -+ .+...+|++|||+|+++|+.++. .+.+++||.+.||+|....|.-.. +
T Consensus 78 a~~fs~~~~~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~g~--~~~L~~Gds~~iP~g~~H~~~N~~d~~ 155 (166)
T 2vpv_A 78 EIMFDKHKEYFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVCKN--KFLSVKGSTFQIPAFNEYAIANRGNDE 155 (166)
T ss_dssp CEECCTTTCSCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEETTE--EEEEETTCEEEECTTCEEEEEECSSSC
T ss_pred EEeecCCcccceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEECCE--EEEEcCCCEEEECCCCCEEEEECCCCC
Confidence 345555434 6778888889 54 22 34678999999999999999874 799999999999999999999865 4
Q ss_pred eEEEEE
Q 031109 158 VDKHYK 163 (165)
Q Consensus 158 vrK~Y~ 163 (165)
.|-+|+
T Consensus 156 Arll~V 161 (166)
T 2vpv_A 156 AKMFFV 161 (166)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 566654
No 33
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.27 E-value=9.1e-07 Score=71.53 Aligned_cols=97 Identities=20% Similarity=0.256 Sum_probs=62.4
Q ss_pred CcchhhhcccccCCCC-cccCCCCeeecccccccccc-eeeEE--EecC--C-------ceeeeeC-CCceEEEEEEcEE
Q 031109 58 PESKLTELGVRQWPKH-CHTGGQPRVLPSKKTHLEAI-WRILR--WGCP--P-------SKFPWTY-SDKETCYLLEGKV 123 (165)
Q Consensus 58 s~~~l~~lGv~~Wp~~-~~~~G~P~~~~~~~~~~~~~-~~~Gi--We~~--p-------g~f~w~y-~~dE~~yVLEG~v 123 (165)
+.+.|+++||..|... +..++++... ......+ ....+ +..+ | ..|+||+ +.+|+.|||+|+.
T Consensus 39 ~~~~L~~~GV~~w~~~~~~~~~~~~l~---~l~~~~gy~~~D~v~~~p~~~p~~~~k~~~~~~~H~H~~~Ei~yVleG~G 115 (191)
T 1vr3_A 39 SLEQLRTLGVLYWKLDADKYENDPELE---KIRKMRNYSWMDIITICKDTLPNYEEKIKMFFEEHLHLDEEIRYILEGSG 115 (191)
T ss_dssp CHHHHHHTTCEEEECCGGGTTSCHHHH---HHHHHHTCCEEEEEEESTTTSTTHHHHHHHHHSCEECSSCEEEEEEEEEE
T ss_pred CHHHHHhcCcEEEECCCccccccHHHH---HHHHhcCCCceeEEEECCCcCcchhhhhccCCcceECCcceEEEEEeceE
Confidence 3688999999999763 2223322221 1111112 12222 2222 2 2256764 6799999999999
Q ss_pred EEEeCCC-ce--eEEEcCCcEEEEcCCCEEEEEEcee
Q 031109 124 KVYPDGS-NE--GVEIGAGDLVVFPKGMSCTWDVSVG 157 (165)
Q Consensus 124 tVt~dgG-~e--~v~i~AGDlv~fPkG~~~tW~V~e~ 157 (165)
.+..+++ ++ .+.+++||++++|+|....+...+.
T Consensus 116 ~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~ 152 (191)
T 1vr3_A 116 YFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEK 152 (191)
T ss_dssp EEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTT
T ss_pred EEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCC
Confidence 9999874 23 3589999999999999998877543
No 34
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=98.26 E-value=7.9e-06 Score=63.19 Aligned_cols=61 Identities=10% Similarity=0.098 Sum_probs=51.7
Q ss_pred eeeEEEecCCcee-eeeC-CCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEce
Q 031109 94 WRILRWGCPPSKF-PWTY-SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 94 ~~~GiWe~~pg~f-~w~y-~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
+.+.++...|+.. ++|+ +..|++|||+|+++++.++. .+.+++||+++||+|....|....
T Consensus 56 ~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~i~~~--~~~l~~Gd~i~ip~~~~H~~~n~~ 118 (167)
T 3ibm_A 56 FETRYFEVEPGGYTTLERHEHTHVVMVVRGHAEVVLDDR--VEPLTPLDCVYIAPHAWHQIHATG 118 (167)
T ss_dssp EEEEEEEECTTCBCCCBBCSSCEEEEEEESEEEEEETTE--EEEECTTCEEEECTTCCEEEEEES
T ss_pred EEEEEEEECCCCCCCCccCCCcEEEEEEeCEEEEEECCE--EEEECCCCEEEECCCCcEEEEeCC
Confidence 5677888888873 4442 68999999999999999874 799999999999999999998755
No 35
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=98.24 E-value=4.4e-06 Score=60.82 Aligned_cols=50 Identities=20% Similarity=0.221 Sum_probs=42.8
Q ss_pred eeeeC-C-CceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEce
Q 031109 106 FPWTY-S-DKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 106 f~w~y-~-~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
++||+ + .+|++|||+|++++..+++ +.+.+++||+++||+|....+....
T Consensus 56 ~~~H~H~~~~E~~~vl~G~~~~~~~~~-~~~~l~~Gd~~~ip~g~~H~~~~~~ 107 (134)
T 2o8q_A 56 PTWHTHTVGFQLFYVLRGWVEFEYEDI-GAVMLEAGGSAFQPPGVRHRELRHS 107 (134)
T ss_dssp CCCEEECCSCEEEEEEESEEEEEETTT-EEEEEETTCEEECCTTCCEEEEEEC
T ss_pred CCCEECCCCcEEEEEEeCEEEEEECCc-EEEEecCCCEEEECCCCcEEeEeCC
Confidence 45553 3 4899999999999999986 5899999999999999999988743
No 36
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=98.23 E-value=2.8e-06 Score=67.38 Aligned_cols=73 Identities=16% Similarity=0.246 Sum_probs=58.2
Q ss_pred ccccceeeEEEecCCcee-eeeC-CCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEce--eeEEEEE
Q 031109 89 HLEAIWRILRWGCPPSKF-PWTY-SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSV--GVDKHYK 163 (165)
Q Consensus 89 ~~~~~~~~GiWe~~pg~f-~w~y-~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e--~vrK~Y~ 163 (165)
..+++..+.+++..|+.. ++|. ...|+.|||+|+++|+.++| +.+.+++||.+ ||+|....|.-.. +++-+++
T Consensus 74 ~~~~G~~~~~v~l~PG~~~~~H~H~~eE~~~VLeGel~l~ld~g-e~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V 150 (172)
T 3es1_A 74 TLDGGSVIRVVDMLPGKESPMHRTNSIDYGIVLEGEIELELDDG-AKRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFI 150 (172)
T ss_dssp STTCSEEEEEEEECTTCBCCCBCCSEEEEEEEEESCEEEECGGG-CEEEECTTCEE-EECSCCBEEECCSSSCEEEEEE
T ss_pred cCCCCeEEEEEEECCCCCCCCeecCceEEEEEEeCEEEEEECCC-eEEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEE
Confidence 344567788889999874 4664 45789999999999999866 58999999999 9999999998653 4655554
No 37
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=98.19 E-value=1e-05 Score=62.50 Aligned_cols=69 Identities=9% Similarity=0.043 Sum_probs=53.2
Q ss_pred eeeEEEecCCcee-e---ee-CCCceEEEEEEcEEEEEeCCC--ceeEEEcCCcEEEEcCCCEEEEEEc---eeeEEEE
Q 031109 94 WRILRWGCPPSKF-P---WT-YSDKETCYLLEGKVKVYPDGS--NEGVEIGAGDLVVFPKGMSCTWDVS---VGVDKHY 162 (165)
Q Consensus 94 ~~~GiWe~~pg~f-~---w~-y~~dE~~yVLEG~vtVt~dgG--~e~v~i~AGDlv~fPkG~~~tW~V~---e~vrK~Y 162 (165)
+.+-.+...|+.. + +| .+.+|++|||+|++++..+++ .+.+.+++||.++||+|....|.-. ++++-+.
T Consensus 117 ~~~~~~~~~pg~~~~~~~~h~h~~~E~~~Vl~G~~~~~~~~~~~~~~~~l~~GD~~~~~~~~~H~~~n~~~~~~~~~l~ 195 (198)
T 2bnm_A 117 LVPLVVDVLTDNPDDAKFNSGHAGNEFLFVLEGEIHMKWGDKENPKEALLPTGASMFVEEHVPHAFTAAKGTGSAKLIA 195 (198)
T ss_dssp CEEEEEEECCCCGGGCCCCCCCSSCEEEEEEESCEEEEESCTTSCEEEEECTTCEEEECTTCCEEEEESTTSCCEEEEE
T ss_pred ceEEEEEEcCCCCCcccccccCCCeEEEEEEeeeEEEEECCcCCcccEEECCCCEEEeCCCCceEEEecCCCCCeEEEE
Confidence 5566677777762 2 44 456899999999999999872 0379999999999999999999976 4554443
No 38
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.17 E-value=1.6e-05 Score=58.63 Aligned_cols=60 Identities=25% Similarity=0.306 Sum_probs=48.9
Q ss_pred eeEEEecCCce-eeeeCC--CceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEce
Q 031109 95 RILRWGCPPSK-FPWTYS--DKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 95 ~~GiWe~~pg~-f~w~y~--~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
.+......|+. +++|+. ..|++|||+|+++++.++. .+.++|||+++||+|....|....
T Consensus 58 ~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~--~~~l~~Gd~i~i~~~~~H~~~n~~ 120 (133)
T 1o4t_A 58 LFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDNGK--DVPIKAGDVCFTDSGESHSIENTG 120 (133)
T ss_dssp EEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEETTE--EEEEETTEEEEECTTCEEEEECCS
T ss_pred EEEEEEECCCCccCceECCCccEEEEEEeCEEEEEECCE--EEEeCCCcEEEECCCCcEEeEECC
Confidence 44556777765 456643 5899999999999999864 799999999999999999998754
No 39
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=98.16 E-value=1.1e-05 Score=60.31 Aligned_cols=61 Identities=10% Similarity=-0.022 Sum_probs=50.3
Q ss_pred eeeEEEecCCce-eeeeC--CCceEEEEEEcEEEEEeCCCcee------EEEcCCcEEEEcCCCEEEEEEce
Q 031109 94 WRILRWGCPPSK-FPWTY--SDKETCYLLEGKVKVYPDGSNEG------VEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 94 ~~~GiWe~~pg~-f~w~y--~~dE~~yVLEG~vtVt~dgG~e~------v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
+.+..+...|+. .++|+ ..+|++|||+|+++++.++. . +.+++||+++||+|....+....
T Consensus 43 ~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~--~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~ 112 (148)
T 2oa2_A 43 LQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHR--QDNLHFQEEVFDDYAILIPAGTWHNVRNTG 112 (148)
T ss_dssp CEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESB--TTBCCEEEEEETTCEEEECTTCEEEEEECS
T ss_pred eEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCc--cccceeeEEECCCCEEEECCCCcEEEEECC
Confidence 566677778776 44554 35799999999999999875 4 99999999999999999998754
No 40
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=98.14 E-value=1.3e-05 Score=61.64 Aligned_cols=68 Identities=9% Similarity=0.085 Sum_probs=52.9
Q ss_pred eeeEEEecCCcee-eeeC-CCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEce--eeEEEEE
Q 031109 94 WRILRWGCPPSKF-PWTY-SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSV--GVDKHYK 163 (165)
Q Consensus 94 ~~~GiWe~~pg~f-~w~y-~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e--~vrK~Y~ 163 (165)
+.+.++...|+.. ++|+ +..|++|||+|+++++.+|. .+.+++||+++||+|....+.... +++-++.
T Consensus 44 ~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~v~v~g~--~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i 115 (156)
T 3kgz_A 44 CEWRYFEVDEGGYSTLERHAHVHAVMIHRGHGQCLVGET--ISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCV 115 (156)
T ss_dssp EEEEEEEEEEEEECCCBBCSSCEEEEEEEEEEEEEETTE--EEEEETTCEEEECTTCCEEEECCSSSCEEEEEE
T ss_pred EEEEEEEECCCCccCceeCCCcEEEEEEeCEEEEEECCE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 5666777777763 4443 56899999999999999764 799999999999999999987643 4544433
No 41
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.11 E-value=6.2e-06 Score=66.11 Aligned_cols=58 Identities=16% Similarity=0.195 Sum_probs=44.8
Q ss_pred eeeEEEecCC-ceeeeeC-CCceEEEEEEcEEEEEeCCC--ceeEEEcCCcEEEEcCCCEEEE
Q 031109 94 WRILRWGCPP-SKFPWTY-SDKETCYLLEGKVKVYPDGS--NEGVEIGAGDLVVFPKGMSCTW 152 (165)
Q Consensus 94 ~~~GiWe~~p-g~f~w~y-~~dE~~yVLEG~vtVt~dgG--~e~v~i~AGDlv~fPkG~~~tW 152 (165)
+.+. +..+| ..|+||. +.+|++|+|+|+++|...++ ...+++++||++++|+|....-
T Consensus 36 ~~V~-~v~Gpn~r~d~H~h~~dE~FyvlkG~m~i~v~d~g~~~~v~l~eGE~f~lP~gvpH~P 97 (174)
T 1yfu_A 36 FIVT-VVGGPNHRTDYHDDPLEEFFYQLRGNAYLNLWVDGRRERADLKEGDIFLLPPHVRHSP 97 (174)
T ss_dssp EEEE-EECSCBCCCCEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTCEEEECTTCCEEE
T ss_pred EEEE-EEcCCCcCccCcCCCCceEEEEEeeEEEEEEEcCCceeeEEECCCCEEEeCCCCCcCc
Confidence 4444 34444 4578874 68999999999999998663 1379999999999999998754
No 42
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=98.10 E-value=4.2e-05 Score=55.01 Aligned_cols=61 Identities=20% Similarity=0.172 Sum_probs=47.3
Q ss_pred ceeeEEEecCCce-ee-eeC-CCce-EEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEc
Q 031109 93 IWRILRWGCPPSK-FP-WTY-SDKE-TCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVS 155 (165)
Q Consensus 93 ~~~~GiWe~~pg~-f~-w~y-~~dE-~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~ 155 (165)
...+.+....|+. .+ +|+ +..| ++||++|+++++.++. .+.+++||+++||+|....+...
T Consensus 25 ~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i~~~--~~~l~~Gd~i~i~~~~~H~~~~~ 89 (125)
T 3cew_A 25 GAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITIDGE--KIELQAGDWLRIAPDGKRQISAA 89 (125)
T ss_dssp SCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEETTE--EEEEETTEEEEECTTCCEEEEEB
T ss_pred CcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEECCE--EEEeCCCCEEEECCCCcEEEEcC
Confidence 3556667777765 33 454 4445 4559999999999864 79999999999999999998875
No 43
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=98.10 E-value=1.7e-05 Score=61.68 Aligned_cols=60 Identities=12% Similarity=0.124 Sum_probs=49.8
Q ss_pred eeeEEEecCCcee-eeeC-CCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEc
Q 031109 94 WRILRWGCPPSKF-PWTY-SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVS 155 (165)
Q Consensus 94 ~~~GiWe~~pg~f-~w~y-~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~ 155 (165)
+.+.++...|+.. ++|+ +..|++|||+|+++++.+|. .+.+++||+++||+|....+...
T Consensus 53 ~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~v~g~--~~~l~~GD~i~ip~g~~H~~~n~ 114 (166)
T 3jzv_A 53 GELRYFEVGPGGHSTLERHQHAHGVMILKGRGHAMVGRA--VSAVAPYDLVTIPGWSWHQFRAP 114 (166)
T ss_dssp EEEEEEEEEEEEECCCBBCSSCEEEEEEEECEEEEETTE--EEEECTTCEEEECTTCCEEEECC
T ss_pred EEEEEEEECCCCccCceeCCCcEEEEEEeCEEEEEECCE--EEEeCCCCEEEECCCCcEEeEeC
Confidence 5667788888763 4443 56899999999999999864 79999999999999999988754
No 44
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=98.07 E-value=1.3e-05 Score=62.55 Aligned_cols=62 Identities=16% Similarity=0.303 Sum_probs=48.7
Q ss_pred eeeEEEecCCcee--eeeCCCceEEEEEEcEEEEEeC--CCceeEEEcCCcEEEEcCCCEEEEEEc
Q 031109 94 WRILRWGCPPSKF--PWTYSDKETCYLLEGKVKVYPD--GSNEGVEIGAGDLVVFPKGMSCTWDVS 155 (165)
Q Consensus 94 ~~~GiWe~~pg~f--~w~y~~dE~~yVLEG~vtVt~d--gG~e~v~i~AGDlv~fPkG~~~tW~V~ 155 (165)
..+......|+.. ++|...+|+.|||+|+++++.. ++.+...+++||+++||+|....+.-.
T Consensus 41 ~~~~~~~l~pg~~~~pHh~~a~E~~yVl~G~~~v~v~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~ 106 (178)
T 1dgw_A 41 YRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINP 106 (178)
T ss_dssp EEEEEEEECTTEEEEEEEESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEEC
T ss_pred EEEEEEEecCCcEecCcCCCCCEEEEEEeEEEEEEEEeCCCcEEEEECCCCEEEECCCCeEEEEeC
Confidence 4455677778764 3344679999999999998764 223589999999999999999988775
No 45
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.06 E-value=2.8e-05 Score=63.35 Aligned_cols=65 Identities=15% Similarity=0.185 Sum_probs=52.2
Q ss_pred eeeEEEecCCce-eeeeCCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEceeeEEE
Q 031109 94 WRILRWGCPPSK-FPWTYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVGVDKH 161 (165)
Q Consensus 94 ~~~GiWe~~pg~-f~w~y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~vrK~ 161 (165)
+..-+.+..|+. ...++ .+|++|||+|+++|+.++. .+++++||.+.||+|....|.-.++.+-+
T Consensus 50 ~~~~~~~l~Pg~~~~~~~-~ee~~~Vl~G~~~~~~~~~--~~~l~~Gd~~~~p~~~~H~~~n~~~~~~l 115 (246)
T 1sfn_A 50 FVQFTAEMPAGAQATESV-YQRFAFVLSGEVDVAVGGE--TRTLREYDYVYLPAGEKHMLTAKTDARVS 115 (246)
T ss_dssp SEEEEEEECTTCEEECCS-SEEEEEEEEEEEEEECSSC--EEEECTTEEEEECTTCCCEEEEEEEEEEE
T ss_pred EEEEEEEECCCCcCCCCc-eeEEEEEEECEEEEEECCE--EEEECCCCEEEECCCCCEEEEeCCCEEEE
Confidence 445567777865 33445 8999999999999999875 79999999999999999999877665433
No 46
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=98.05 E-value=4.1e-05 Score=54.90 Aligned_cols=56 Identities=13% Similarity=0.143 Sum_probs=45.6
Q ss_pred EEecCCce-eeeeC-CCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEc
Q 031109 98 RWGCPPSK-FPWTY-SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVS 155 (165)
Q Consensus 98 iWe~~pg~-f~w~y-~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~ 155 (165)
.....|+. +++|+ +..|+.||++|++++..++. .+.+++||+++||+|....+...
T Consensus 38 ~~~~~pg~~~~~H~H~~~Ei~~v~~G~~~~~i~~~--~~~l~~Gd~~~i~~~~~H~~~~~ 95 (128)
T 4i4a_A 38 WCIVRPETKSFRHSHNEYELFIVIQGNAIIRINDE--DFPVTKGDLIIIPLDSEHHVINN 95 (128)
T ss_dssp EEEECTTEECCCBCCSSEEEEEEEESEEEEEETTE--EEEEETTCEEEECTTCCEEEEEC
T ss_pred EEEECCCCccCCEecCCeEEEEEEeCEEEEEECCE--EEEECCCcEEEECCCCcEEeEeC
Confidence 34445554 34443 68999999999999999874 79999999999999999998875
No 47
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=98.05 E-value=2.4e-05 Score=59.12 Aligned_cols=63 Identities=16% Similarity=0.065 Sum_probs=50.4
Q ss_pred eeeEEEecCCce-eeee-CCCceEEEEEEcEEEEEeCCCc-------eeEEEcCCcEEEEcCCCEEEEEEce
Q 031109 94 WRILRWGCPPSK-FPWT-YSDKETCYLLEGKVKVYPDGSN-------EGVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 94 ~~~GiWe~~pg~-f~w~-y~~dE~~yVLEG~vtVt~dgG~-------e~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
+.+......|+. .++| .+..|++|||+|++++..+++. +.+.+++||+++||+|....+....
T Consensus 41 ~~~~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~ 112 (163)
T 1lr5_A 41 VEVWLQTISPGQRTPIHRHSCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSD 112 (163)
T ss_dssp EEEEEEEECTTCBCCEEEESSCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCC
T ss_pred EEEEEEEECCCCcCCCeECCCCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCC
Confidence 556667777776 3444 2678999999999999998831 3799999999999999999988654
No 48
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.04 E-value=3.8e-05 Score=57.78 Aligned_cols=62 Identities=15% Similarity=0.161 Sum_probs=51.5
Q ss_pred eeeEEEecCCce-eeeeC-CCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEce
Q 031109 94 WRILRWGCPPSK-FPWTY-SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 94 ~~~GiWe~~pg~-f~w~y-~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
+.+..+...|+. .++|+ +..|++|||+|++++..++. +.+.+++||+++||+|....+....
T Consensus 48 ~~~~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~-~~~~l~~Gd~i~ip~~~~H~~~n~~ 111 (147)
T 2f4p_A 48 TQVYDVVFEPGARTHWHSHPGGQILIVTRGKGFYQERGK-PARILKKGDVVEIPPNVVHWHGAAP 111 (147)
T ss_dssp CEEEEEEECTTCEECSEECTTCEEEEEEEEEEEEEETTS-CCEEEETTCEEEECTTCCEEEEEBT
T ss_pred EEEEEEEECCCCccCceECCCceEEEEEeCEEEEEECCE-EEEEECCCCEEEECCCCcEEeEeCC
Confidence 667778887775 45653 56999999999999999876 2399999999999999999988764
No 49
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=98.04 E-value=2.5e-05 Score=60.33 Aligned_cols=61 Identities=18% Similarity=0.114 Sum_probs=50.3
Q ss_pred eeeEEEecCCcee-e--eeC-CCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEce
Q 031109 94 WRILRWGCPPSKF-P--WTY-SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 94 ~~~GiWe~~pg~f-~--w~y-~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
+.+-.+...|+.. + +|. +.+|++|||+|+++++.++ +.+.+++||+++||+|....|....
T Consensus 104 ~~~~~~~~~pg~~~~~~~H~h~~~E~~~Vl~G~~~~~~~~--~~~~l~~GD~i~i~~~~~H~~~n~~ 168 (192)
T 1y9q_A 104 LEIFEITLLDHHQQMSSPHALGVIEYIHVLEGIMKVFFDE--QWHELQQGEHIRFFSDQPHGYAAVT 168 (192)
T ss_dssp EEEEEEEECTTCEEEECCCSTTCEEEEEEEESCEEEEETT--EEEEECTTCEEEEECSSSEEEEESS
T ss_pred EEEEEEEECCCCCccCCCCCCCCEEEEEEEEeEEEEEECC--EEEEeCCCCEEEEcCCCCeEeECCC
Confidence 5566677788763 2 554 4589999999999999976 4899999999999999999998864
No 50
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.03 E-value=2.1e-05 Score=57.71 Aligned_cols=60 Identities=15% Similarity=0.166 Sum_probs=50.0
Q ss_pred eeeEEEecCCcee-------eeeCCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEc
Q 031109 94 WRILRWGCPPSKF-------PWTYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVS 155 (165)
Q Consensus 94 ~~~GiWe~~pg~f-------~w~y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~ 155 (165)
..+|...|.++.. +...+.-|+.||++|++++..++. .+.+++||++++|+|....+...
T Consensus 13 ~~~G~~~~~~~~~~~~~~~~p~~h~~~~i~~v~~G~~~~~i~~~--~~~l~~Gd~~~i~p~~~H~~~~~ 79 (164)
T 2arc_A 13 LVAGLTPIEANGYLDFFIDRPLGMKGYILNLTIRGQGVVKNQGR--EFVCRPGDILLFPPGEIHHYGRH 79 (164)
T ss_dssp CEEEEEEEETTSTTCSCEEETTCCSSEEEEEEEEECEEEEETTE--EEEECTTCEEEECTTCCEEEEEC
T ss_pred hhhcceeeccCCchhhhhccccCCCceEEEEEEEeEEEEEECCE--EEEecCCeEEEEcCCCCEEEEeC
Confidence 4578888888543 223567899999999999999874 79999999999999999998875
No 51
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.03 E-value=4.8e-05 Score=62.07 Aligned_cols=61 Identities=11% Similarity=0.082 Sum_probs=50.8
Q ss_pred eeeEEEecCCce-eeee--CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEce
Q 031109 94 WRILRWGCPPSK-FPWT--YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 94 ~~~GiWe~~pg~-f~w~--y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
+.+.++.-.|+. .++| ...+|+.|||+|+++++.++. .+.++|||.++||+|....+.-..
T Consensus 179 ~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~--~~~l~~GD~i~~~~~~~H~~~n~g 242 (261)
T 1rc6_A 179 MNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNN--WIPVKKGDYIFMGAYSLQAGYGVG 242 (261)
T ss_dssp EEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEESSSC--EEEEETTCEEEECSSEEEEEEEC-
T ss_pred eEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEECCE--EEEeCCCCEEEECCCCcEEeEeCC
Confidence 567888888877 3444 456899999999999999864 799999999999999999988763
No 52
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=98.01 E-value=4.9e-05 Score=60.05 Aligned_cols=70 Identities=20% Similarity=0.149 Sum_probs=51.3
Q ss_pred eeeEEEecCCce-eeeeCC--CceEEEEEEcEEEEEeCCC----ce--eEEEcCCcEEEEcCCCEEEEEEce--eeEEEE
Q 031109 94 WRILRWGCPPSK-FPWTYS--DKETCYLLEGKVKVYPDGS----NE--GVEIGAGDLVVFPKGMSCTWDVSV--GVDKHY 162 (165)
Q Consensus 94 ~~~GiWe~~pg~-f~w~y~--~dE~~yVLEG~vtVt~dgG----~e--~v~i~AGDlv~fPkG~~~tW~V~e--~vrK~Y 162 (165)
..+......|+. .++|+. .+|+.|||+|++++...++ ++ ...+++||+++||+|....+.-.. +++-++
T Consensus 72 ~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~ 151 (201)
T 1fi2_A 72 VSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVV 151 (201)
T ss_dssp CEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred eEEEEEEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEE
Confidence 345556777776 345543 4799999999999987532 24 789999999999999999987643 444443
Q ss_pred E
Q 031109 163 K 163 (165)
Q Consensus 163 ~ 163 (165)
+
T Consensus 152 v 152 (201)
T 1fi2_A 152 S 152 (201)
T ss_dssp E
T ss_pred E
Confidence 3
No 53
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=98.00 E-value=1.3e-05 Score=63.11 Aligned_cols=57 Identities=7% Similarity=0.036 Sum_probs=43.1
Q ss_pred eeEEEecCCce-eeeeCCCceEEEEEE--cEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEE
Q 031109 95 RILRWGCPPSK-FPWTYSDKETCYLLE--GKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWD 153 (165)
Q Consensus 95 ~~GiWe~~pg~-f~w~y~~dE~~yVLE--G~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~ 153 (165)
.+-+++...+. +.||-..+|++|||+ |++++..+| +.+.++|||+++||+|....+.
T Consensus 48 sv~~v~~g~~~~~H~H~~~~E~~yVLe~~G~g~v~idg--e~~~l~~GD~v~IPpg~~H~i~ 107 (157)
T 4h7l_A 48 SVHYTQITKAARTHYHREHQEIYVVLDHAAHATIELNG--QSYPLTKLLAISIPPLVRHRIV 107 (157)
T ss_dssp EEEEEEECSCCCCBBCSSCEEEEEEEEECTTCEEEETT--EEEECCTTEEEEECTTCCEEEE
T ss_pred EEEEEeCCCCccceECCCCcEEEEEEecCcEEEEEECC--EEEEeCCCCEEEECCCCeEeeE
Confidence 33444444322 334434589999999 999999976 4799999999999999988875
No 54
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=97.96 E-value=8.2e-05 Score=62.68 Aligned_cols=62 Identities=21% Similarity=0.400 Sum_probs=47.9
Q ss_pred eeEEEecCCcee---eeeCCCceEEEEEEcEEEEEe---CCCceeEEEcCCcEEEEcCCCEEEEEEce
Q 031109 95 RILRWGCPPSKF---PWTYSDKETCYLLEGKVKVYP---DGSNEGVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 95 ~~GiWe~~pg~f---~w~y~~dE~~yVLEG~vtVt~---dgG~e~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
.+......|+.. .||-..+|++|||+|+++++. +|..+.+.+++||+++||+|....+.-..
T Consensus 53 ~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~ 120 (361)
T 2vqa_A 53 AGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVEIADVDKGGLWYFPRGWGHSIEGIG 120 (361)
T ss_dssp EEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEEEEEEETTEEEEECTTCEEEEEECS
T ss_pred eeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCC
Confidence 344456666653 345448999999999999998 43324689999999999999999988765
No 55
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=97.94 E-value=3.1e-05 Score=64.52 Aligned_cols=66 Identities=14% Similarity=0.193 Sum_probs=52.4
Q ss_pred eeeEEEecCCcee---eee-CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEc--eeeEEE
Q 031109 94 WRILRWGCPPSKF---PWT-YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVS--VGVDKH 161 (165)
Q Consensus 94 ~~~GiWe~~pg~f---~w~-y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~--e~vrK~ 161 (165)
+.+.+++..|+.- +++ .+.+|++|||+|+++|+.+|. .+++++||.++||+|....|.-. ++++-+
T Consensus 68 ~~~~~~~l~PG~~~~~~~h~H~~eE~~~Vl~G~l~v~v~g~--~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l 139 (278)
T 1sq4_A 68 FSQYIVELAPNGGSDKPEQDPNAEAVLFVVEGELSLTLQGQ--VHAMQPGGYAFIPPGADYKVRNTTGQHTRFH 139 (278)
T ss_dssp CEEEEEEEEEEEEESSCCCCTTEEEEEEEEESCEEEEESSC--EEEECTTEEEEECTTCCEEEECCSSSCEEEE
T ss_pred EEEEEEEECCCCccCCCCcCCCceEEEEEEeCEEEEEECCE--EEEECCCCEEEECCCCcEEEEECCCCCEEEE
Confidence 5566677777763 333 457999999999999999864 79999999999999999999875 344433
No 56
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=97.93 E-value=4.6e-05 Score=64.17 Aligned_cols=68 Identities=9% Similarity=0.089 Sum_probs=52.4
Q ss_pred eeeEEEecCCceee-e-eCCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEceeeEEEE
Q 031109 94 WRILRWGCPPSKFP-W-TYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVGVDKHY 162 (165)
Q Consensus 94 ~~~GiWe~~pg~f~-w-~y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~vrK~Y 162 (165)
+...+-+-.|+... . +-+.+|++|||+|+++|+.++| +.+++++||.+.||+|...+|.-.++.+-++
T Consensus 70 f~~~lv~l~PGg~s~~~~h~~EEfiyVleG~l~l~l~~g-~~~~L~~Gds~y~p~~~~H~~~N~~~Ar~l~ 139 (266)
T 4e2q_A 70 FVMYLAKMKEMSSSGLPPQDIERLIFVVEGAVTLTNTSS-SSKKLTVDSYAYLPPNFHHSLDCVESATLVV 139 (266)
T ss_dssp SEEEEEEECSSEECCCCCTTEEEEEEEEEECEEEEC--C-CCEEECTTEEEEECTTCCCEEEESSCEEEEE
T ss_pred EEEEEEEECcCCcCCCCCCCCeEEEEEEEEEEEEEECCC-cEEEEcCCCEEEECCCCCEEEEeCCCEEEEE
Confidence 45556777776632 2 3456999999999999999845 4799999999999999999999877665444
No 57
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=97.93 E-value=1.5e-05 Score=63.93 Aligned_cols=53 Identities=15% Similarity=0.176 Sum_probs=44.0
Q ss_pred EEecCCce-eeeeC-CCceEEEEEEcEEEEEeCCCc------eeEEEcCCcEEEEcCCCEE
Q 031109 98 RWGCPPSK-FPWTY-SDKETCYLLEGKVKVYPDGSN------EGVEIGAGDLVVFPKGMSC 150 (165)
Q Consensus 98 iWe~~pg~-f~w~y-~~dE~~yVLEG~vtVt~dgG~------e~v~i~AGDlv~fPkG~~~ 150 (165)
+|..+|.. ++||. +.+|++|+|+|+..|...+.+ ..++|++||++++|+|...
T Consensus 38 ~~vgGPn~r~D~H~~~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpH 98 (176)
T 1zvf_A 38 MIVGGPNERTDYHINPTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPH 98 (176)
T ss_dssp EEECSSBCCSCEEECSSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCE
T ss_pred EEEcCCCcCCcCcCCCCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCc
Confidence 36677766 88885 579999999999999987621 2699999999999999875
No 58
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=97.92 E-value=3.9e-05 Score=59.52 Aligned_cols=70 Identities=14% Similarity=0.065 Sum_probs=49.4
Q ss_pred ccccceeeEEEecCCc-------eeeeeCCCceEEEEEEcEEEEEeCCC------ceeEEEcCCcEEEEcCCCEEEEEEc
Q 031109 89 HLEAIWRILRWGCPPS-------KFPWTYSDKETCYLLEGKVKVYPDGS------NEGVEIGAGDLVVFPKGMSCTWDVS 155 (165)
Q Consensus 89 ~~~~~~~~GiWe~~pg-------~f~w~y~~dE~~yVLEG~vtVt~dgG------~e~v~i~AGDlv~fPkG~~~tW~V~ 155 (165)
.+.++..+++--..|. .+..|-+.||+|+||+|+++|...++ ...+++++|+++++|||....=...
T Consensus 20 ~~~~~W~Va~~n~~~~~~~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~ 99 (140)
T 3d0j_A 20 YKNEKWLVCIKNWKPDNDIEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQ 99 (140)
T ss_dssp EECSSEEEEEEECCGGGBTTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEEC
T ss_pred EEcCCEEEEEEeccCcCCcccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCC
Confidence 3445556666333222 34556789999999999999998742 1379999999999999987665444
Q ss_pred eee
Q 031109 156 VGV 158 (165)
Q Consensus 156 e~v 158 (165)
+-+
T Consensus 100 ~e~ 102 (140)
T 3d0j_A 100 KDT 102 (140)
T ss_dssp TTC
T ss_pred Cce
Confidence 433
No 59
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=97.91 E-value=6.5e-05 Score=59.14 Aligned_cols=62 Identities=16% Similarity=0.072 Sum_probs=49.3
Q ss_pred eeeEEEecCCcee-------eeeCC----CceEEEEEEcEEEEEeCCCce----eEEEcCCcEEEEcCCCEEEEEEce
Q 031109 94 WRILRWGCPPSKF-------PWTYS----DKETCYLLEGKVKVYPDGSNE----GVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 94 ~~~GiWe~~pg~f-------~w~y~----~dE~~yVLEG~vtVt~dgG~e----~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
...++....|+.. ++|+. .+|++|||+|+++++.++. + .+.+++||+++||+|....+.-..
T Consensus 67 l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~-~g~~~~~~l~~GD~v~ip~g~~H~~~N~g 143 (190)
T 1x82_A 67 LNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTP-EGDAKWISMEPGTVVYVPPYWAHRTVNIG 143 (190)
T ss_dssp EEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECT-TCCEEEEEECTTCEEEECTTCEEEEEECS
T ss_pred eEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCc-CCcEEEEEECCCcEEEECCCCeEEEEECC
Confidence 5667777778764 34433 3799999999999999875 2 389999999999999999887653
No 60
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=97.89 E-value=6.9e-05 Score=61.92 Aligned_cols=62 Identities=23% Similarity=0.400 Sum_probs=50.1
Q ss_pred eeeEEEecCCce-eeeeC-C-CceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEcee
Q 031109 94 WRILRWGCPPSK-FPWTY-S-DKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVG 157 (165)
Q Consensus 94 ~~~GiWe~~pg~-f~w~y-~-~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~ 157 (165)
+.+-.....|+. .++|+ + .+|++|||+|+++++.++ +.+.+++||+++||+|....+.....
T Consensus 46 ~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~~--~~~~l~~Gd~~~~p~~~~H~~~n~~~ 110 (337)
T 1y3t_A 46 FEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTLDG--ERYLLISGDYANIPAGTPHSYRMQSH 110 (337)
T ss_dssp EEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEETT--EEEEECTTCEEEECTTCCEEEEECST
T ss_pred EEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEECC--EEEEECCCCEEEECCCCcEEEEECCC
Confidence 555667777765 34442 4 799999999999999875 47999999999999999999987654
No 61
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=97.88 E-value=4.7e-05 Score=61.60 Aligned_cols=62 Identities=10% Similarity=0.029 Sum_probs=51.2
Q ss_pred eeeEEEecCCce-eeee-CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEE-EcCCCEEEEEEcee
Q 031109 94 WRILRWGCPPSK-FPWT-YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVV-FPKGMSCTWDVSVG 157 (165)
Q Consensus 94 ~~~GiWe~~pg~-f~w~-y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~-fPkG~~~tW~V~e~ 157 (165)
..+.+|...|+. .++| .+..|+.|||+|+++++.+| +...+.+||.++ +|+|....+.....
T Consensus 34 ~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~~~~--~~~~l~~Gd~i~~ip~~~~H~~~n~~~ 98 (243)
T 3h7j_A 34 TEVLMSYVPPHTNVEPHQHKEVQIGMVVSGELMMTVGD--VTRKMTALESAYIAPPHVPHGARNDTD 98 (243)
T ss_dssp EEEEEEEECTTEEEEEECCSSEEEEEEEESEEEEEETT--EEEEEETTTCEEEECTTCCEEEEECSS
T ss_pred CEEEEEEECCCCccCCEECCCcEEEEEEEeEEEEEECC--EEEEECCCCEEEEcCCCCcEeeEeCCC
Confidence 356678888887 4566 46899999999999999975 479999999995 99999999988653
No 62
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=97.86 E-value=6.8e-05 Score=61.76 Aligned_cols=62 Identities=11% Similarity=0.108 Sum_probs=51.2
Q ss_pred eeeEEEecCCcee-ee-eC-CCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEcee
Q 031109 94 WRILRWGCPPSKF-PW-TY-SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVG 157 (165)
Q Consensus 94 ~~~GiWe~~pg~f-~w-~y-~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~ 157 (165)
+.+.++...|+.. ++ |+ +.+|+.|||+|++++..++. .+++++||+++||+|....|.-...
T Consensus 182 ~~~~~~~l~pg~~~~~~H~H~~~E~~yVl~G~~~~~i~~~--~~~l~~GD~i~i~~~~~H~~~n~~~ 246 (274)
T 1sef_A 182 MNMHILSFEPGASHAYIETHVQEHGAYLISGQGMYNLDNE--WYPVEKGDYIFMSAYVPQAAYAVGR 246 (274)
T ss_dssp EEEEEEEECTTCBCSSCBCCSCCEEEEEEECEEEEEETTE--EEEEETTCEEEECTTCCEEEEEECS
T ss_pred EEEEEEEECCCCccCcceeccCeEEEEEEeCEEEEEECCE--EEEECCCCEEEECCCCCEEEEeCCC
Confidence 5677788888773 34 42 56899999999999999874 7999999999999999999887643
No 63
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=97.85 E-value=0.0001 Score=65.64 Aligned_cols=63 Identities=14% Similarity=0.231 Sum_probs=50.9
Q ss_pred eeeEEEecCCcee--eeeCCCceEEEEEEcEEEEEe--CCCceeEEEcCCcEEEEcCCCEEEEEEce
Q 031109 94 WRILRWGCPPSKF--PWTYSDKETCYLLEGKVKVYP--DGSNEGVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 94 ~~~GiWe~~pg~f--~w~y~~dE~~yVLEG~vtVt~--dgG~e~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
..+......|+.+ ++|.+.+|++|||+|+++++. +++.+...+++||+++||+|...-+.-..
T Consensus 61 ~s~~~~~l~PGg~~~pHh~~a~Ei~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g 127 (434)
T 2ea7_A 61 YRVVEFKSKPNTLLLPHHADADFLLVVLNGTAVLTLVNPDSRDSYILEQGHAQKIPAGTTFFLVNPD 127 (434)
T ss_dssp CEEEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEECC
T ss_pred EEEEEEEecCCcCccCccCCCceEEEEEecEEEEEEEeCCCCEEEEeCCCCEEEECCCccEEEEeCC
Confidence 3556688889885 344578999999999999876 33346899999999999999998887764
No 64
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=97.82 E-value=9.5e-05 Score=66.05 Aligned_cols=63 Identities=16% Similarity=0.294 Sum_probs=51.0
Q ss_pred eeeEEEecCCcee--eeeCCCceEEEEEEcEEEEEe--CCCceeEEEcCCcEEEEcCCCEEEEEEce
Q 031109 94 WRILRWGCPPSKF--PWTYSDKETCYLLEGKVKVYP--DGSNEGVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 94 ~~~GiWe~~pg~f--~w~y~~dE~~yVLEG~vtVt~--dgG~e~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
..+......|+.+ ++|.+.+|+.|||+|+++++. .++.+...+++||+++||+|...-|.-..
T Consensus 86 ~s~~~~~l~Pgg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~~P~G~~H~~~N~g 152 (445)
T 2cav_A 86 YRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPD 152 (445)
T ss_dssp EEEEEEEECSSEEEEEEEESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECC
T ss_pred EEEEEEEECCCcCccCcCCCCceEEEEEeCEEEEEEEeCCCCEEEEecCCCEEEECCCCcEEEEECC
Confidence 4556788899985 345578999999999999885 33236899999999999999999988764
No 65
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=97.81 E-value=4.4e-05 Score=62.25 Aligned_cols=60 Identities=12% Similarity=0.133 Sum_probs=47.0
Q ss_pred eeEEEecCCceee---ee-CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEce
Q 031109 95 RILRWGCPPSKFP---WT-YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 95 ~~GiWe~~pg~f~---w~-y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
..-+.+..|+.-. .+ -..+|++|||+|+++|+.++ +.+.++|||.+.||+|....|.-..
T Consensus 60 ~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~~--~~~~L~~Gd~~~~~~~~~H~~~N~~ 123 (261)
T 1rc6_A 60 VDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEG--KTFALSEGGYLYCPPGSLMTFVNAQ 123 (261)
T ss_dssp EEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEETT--EEEEEETTEEEEECTTCCCEEEECS
T ss_pred EEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEECC--EEEEECCCCEEEECCCCCEEEEeCC
Confidence 3445666666532 22 23589999999999999976 4799999999999999999998763
No 66
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=97.78 E-value=5.8e-05 Score=61.03 Aligned_cols=63 Identities=11% Similarity=0.047 Sum_probs=49.3
Q ss_pred EecCC-ce-eeeeC-CCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEc--eeeEEEEE
Q 031109 99 WGCPP-SK-FPWTY-SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVS--VGVDKHYK 163 (165)
Q Consensus 99 We~~p-g~-f~w~y-~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~--e~vrK~Y~ 163 (165)
-..+| +. .++|. +..|++|||+|+++++.+++ .+.++|||.++||+|....+... ++++-.++
T Consensus 150 ~~~~p~g~~~~~H~H~~~e~~~Vl~G~~~~~i~~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v 217 (243)
T 3h7j_A 150 AKIPGNGGEMPFHKHRNEQIGICIGGGYDMTVEGC--TVEMKFGTAYFCEPREDHGAINRSEKESKSINI 217 (243)
T ss_dssp EEECTTTEEEEEECCSSEEEEEECSSCEEEEETTE--EEEECTTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred EEECCCCCcCCCEeCCCcEEEEEEECEEEEEECCE--EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 33556 44 45553 56899999999999999875 79999999999999999999877 44554444
No 67
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=97.78 E-value=3.6e-05 Score=63.53 Aligned_cols=63 Identities=16% Similarity=0.181 Sum_probs=48.4
Q ss_pred eeeEEEecCCce-eee--eCCCceEEEEEEcEEEEEe--------CCCce-----------eEEEcCCcEEEEcCCCEEE
Q 031109 94 WRILRWGCPPSK-FPW--TYSDKETCYLLEGKVKVYP--------DGSNE-----------GVEIGAGDLVVFPKGMSCT 151 (165)
Q Consensus 94 ~~~GiWe~~pg~-f~w--~y~~dE~~yVLEG~vtVt~--------dgG~e-----------~v~i~AGDlv~fPkG~~~t 151 (165)
+.+-.....|+. .++ |...+|++|||+|++++.. ++. + .+.++|||+++||+|....
T Consensus 43 ~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~ 121 (239)
T 2xlg_A 43 FAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDEL-PVVGGAGRGDLYSIQSEPKQLIYSPNHYMHG 121 (239)
T ss_dssp EEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSC-CSTTTTCCEEEEEEECCTTEEEEECTTEEEE
T ss_pred EEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCc-ccccccccCceeEEEECCCCEEEECCCCCEE
Confidence 344445667776 233 4457999999999999988 443 1 7899999999999999999
Q ss_pred EEEcee
Q 031109 152 WDVSVG 157 (165)
Q Consensus 152 W~V~e~ 157 (165)
|.....
T Consensus 122 ~~N~~~ 127 (239)
T 2xlg_A 122 FVNPTD 127 (239)
T ss_dssp EECCSS
T ss_pred EEeCCC
Confidence 987653
No 68
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=97.77 E-value=0.00012 Score=64.67 Aligned_cols=62 Identities=16% Similarity=0.347 Sum_probs=50.5
Q ss_pred eeeEEEecCCcee--eeeCCCceEEEEEEcEEEEEe--CCCceeEEEcCCcEEEEcCCCEEEEEEc
Q 031109 94 WRILRWGCPPSKF--PWTYSDKETCYLLEGKVKVYP--DGSNEGVEIGAGDLVVFPKGMSCTWDVS 155 (165)
Q Consensus 94 ~~~GiWe~~pg~f--~w~y~~dE~~yVLEG~vtVt~--dgG~e~v~i~AGDlv~fPkG~~~tW~V~ 155 (165)
..+......|+.. ++|.+.+|+.|||+|+++++. +++.+...+++||+++||+|....+.-.
T Consensus 49 ~s~~~~~l~PGg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~ 114 (416)
T 1uij_A 49 YRIVQFQSKPNTILLPHHADADFLLFVLSGRAILTLVNNDDRDSYNLHPGDAQRIPAGTTYYLVNP 114 (416)
T ss_dssp CEEEEEEECTTEEEEEEEESEEEEEEEEESCEEEEEECSSCEEEEEECTTEEEEECTTCEEEEEEC
T ss_pred EEEEEEEeccCcCcccccCCCceEEEEEeeEEEEEEEECCCCeEEEecCCCEEEECCCCeEEEEec
Confidence 4566788889884 345678999999999999885 2333689999999999999999988776
No 69
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=97.75 E-value=7.4e-05 Score=61.77 Aligned_cols=44 Identities=25% Similarity=0.598 Sum_probs=40.2
Q ss_pred CceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEcee
Q 031109 112 DKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVG 157 (165)
Q Consensus 112 ~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~ 157 (165)
.+|++|||+|+++++.++ +.+.+++||+++||+|....|.....
T Consensus 239 ~~e~~~vl~G~~~~~i~~--~~~~l~~GD~~~ip~~~~H~~~n~~~ 282 (337)
T 1y3t_A 239 HTETFYCLEGQMTMWTDG--QEIQLNPGDFLHVPANTVHSYRLDSH 282 (337)
T ss_dssp CEEEEEEEESCEEEEETT--EEEEECTTCEEEECTTCCEEEEECSS
T ss_pred CcEEEEEEeCEEEEEECC--EEEEECCCCEEEECCCCeEEEEECCC
Confidence 699999999999999976 47999999999999999999988764
No 70
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=97.75 E-value=6.7e-05 Score=61.80 Aligned_cols=60 Identities=13% Similarity=0.122 Sum_probs=46.9
Q ss_pred eeEEEecCCcee-e--ee-CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEce
Q 031109 95 RILRWGCPPSKF-P--WT-YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 95 ~~GiWe~~pg~f-~--w~-y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
..-+.+..|+.- . .+ -..+|+.|||+|+++|+.++. .+.+++||.+.||+|....|.-..
T Consensus 63 ~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~~~--~~~L~~GD~~~~~~~~~H~~~N~~ 126 (274)
T 1sef_A 63 VDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSDGQE--THELEAGGYAYFTPEMKMYLANAQ 126 (274)
T ss_dssp EEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEECSSC--EEEEETTEEEEECTTSCCEEEESS
T ss_pred EEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEECCE--EEEECCCCEEEECCCCCEEEEeCC
Confidence 344566666652 1 22 245899999999999999764 799999999999999999998763
No 71
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=97.75 E-value=0.00015 Score=53.95 Aligned_cols=63 Identities=24% Similarity=0.310 Sum_probs=54.8
Q ss_pred eeeEEEecCCceeeeeCCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEceee
Q 031109 94 WRILRWGCPPSKFPWTYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVGV 158 (165)
Q Consensus 94 ~~~GiWe~~pg~f~w~y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~v 158 (165)
-++|+- .||.|.+.....|+|.|+.|+++|..+|..+-.+++|||.|.+|++.+-.-+|.+.+
T Consensus 38 kTlGVm--~PGeY~F~T~~~E~MevvsG~l~V~LpG~~eW~~~~aGesF~VpanssF~lkv~~~t 100 (106)
T 3eo6_A 38 HSLTLL--HPGVYTLSSEVAETIRVLSGMAYYHAEGANDVQELHAGDSMVIPANQSYRLEVMEPL 100 (106)
T ss_dssp EEEEEE--CSEEEEECCSSCEEEEEEEEEEEEECTTCSSCEEEETTCEEEECSSSCEEEEEEEEE
T ss_pred EEEEEE--eeeEEEecCCCcEEEEEEEeEEEEECCCCccCEEECCCCEEEECCCCcEEEEECceE
Confidence 567775 467888888999999999999999999976789999999999999999888887654
No 72
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=97.72 E-value=0.00017 Score=60.69 Aligned_cols=61 Identities=20% Similarity=0.281 Sum_probs=48.3
Q ss_pred eeeEEEecCCcee-e--eeCCCceEEEEEEcEEEEEe--CCCce--eEEEcCCcEEEEcCCCEEEEEEc
Q 031109 94 WRILRWGCPPSKF-P--WTYSDKETCYLLEGKVKVYP--DGSNE--GVEIGAGDLVVFPKGMSCTWDVS 155 (165)
Q Consensus 94 ~~~GiWe~~pg~f-~--w~y~~dE~~yVLEG~vtVt~--dgG~e--~v~i~AGDlv~fPkG~~~tW~V~ 155 (165)
+.+......|+.. + ||...+|++|||+|+++++. ++| + .+.+++||+++||+|....+.-.
T Consensus 234 ~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g-~~~~~~l~~GD~~~ip~~~~H~~~n~ 301 (361)
T 2vqa_A 234 MTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVFASEG-KASVSRLQQGDVGYVPKGYGHAIRNS 301 (361)
T ss_dssp CEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEEECSTT-CEEEEEECTTCEEEECTTCEEEEECC
T ss_pred ceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEEEcCCC-cEEEEEECCCCEEEECCCCeEEeEEC
Confidence 4566777788763 3 44445999999999999987 234 3 79999999999999999988764
No 73
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=97.71 E-value=0.00032 Score=59.74 Aligned_cols=63 Identities=19% Similarity=0.312 Sum_probs=49.1
Q ss_pred ceeeEEEecCCcee-eeeC-CCceEEEEEEcEEEEEeC--CCce--eEEEcCCcEEEEcCCCEEEEEEce
Q 031109 93 IWRILRWGCPPSKF-PWTY-SDKETCYLLEGKVKVYPD--GSNE--GVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 93 ~~~~GiWe~~pg~f-~w~y-~~dE~~yVLEG~vtVt~d--gG~e--~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
.+.+......|+.. +.|+ +.+|++|||+|+++++.. +| + ...+++||+++||+|....+.-.+
T Consensus 78 ~~~~~~~~l~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g-~~~~~~l~~GD~~~ip~g~~H~~~n~~ 146 (385)
T 1j58_A 78 NLASVNMRLKPGAIRELHWHKEAEWAYMIYGSARVTIVDEKG-RSFIDDVGEGDLWYFPSGLPHSIQALE 146 (385)
T ss_dssp SCEEEEEEECTTCEEEEEEESSCEEEEEEEEEEEEEEECTTS-CEEEEEEETTEEEEECTTCCEEEEEEE
T ss_pred ceEEEEEEECCCCCCCCccCChheEEEEEeeeEEEEEEeCCC-cEEEEEeCCCCEEEECCCCeEEEEECC
Confidence 35667777788763 3442 479999999999999983 23 4 459999999999999998887654
No 74
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=97.70 E-value=7.8e-05 Score=53.30 Aligned_cols=65 Identities=11% Similarity=0.153 Sum_probs=48.1
Q ss_pred cccceeeEEEecCCcee-eeeCCCc--eEEEEEEcEEEEEeCCCc-eeEEEcCCcEEEEcCCCEEEEEE
Q 031109 90 LEAIWRILRWGCPPSKF-PWTYSDK--ETCYLLEGKVKVYPDGSN-EGVEIGAGDLVVFPKGMSCTWDV 154 (165)
Q Consensus 90 ~~~~~~~GiWe~~pg~f-~w~y~~d--E~~yVLEG~vtVt~dgG~-e~v~i~AGDlv~fPkG~~~tW~V 154 (165)
+++..++-.|.-.||.. .||.... +++|+++|++++..+||. +.+.++|||.+++|+|....-.-
T Consensus 13 ~~~~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~~dG~~~~~~l~aGd~~~~p~G~~H~~~N 81 (98)
T 2ozi_A 13 DNDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRN 81 (98)
T ss_dssp ESSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEEE
T ss_pred eCCcEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEeCCCcEEEEEECCCCEEEECCCCceeCEE
Confidence 33456777899999985 5875544 445557999999998883 25789999999999998755443
No 75
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=97.66 E-value=8.6e-05 Score=63.65 Aligned_cols=49 Identities=14% Similarity=0.323 Sum_probs=41.8
Q ss_pred eeCCCceEEEEEEcEEEEEeCCC---ceeEEEcCCcEEEEcCCCEEEEEEce
Q 031109 108 WTYSDKETCYLLEGKVKVYPDGS---NEGVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 108 w~y~~dE~~yVLEG~vtVt~dgG---~e~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
+|-..+|++|||+|++++..+++ .+.+.+++||+++||+|....|....
T Consensus 67 ~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~ 118 (350)
T 1juh_A 67 IHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQD 118 (350)
T ss_dssp ECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECS
T ss_pred cCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCC
Confidence 44457999999999999998771 14799999999999999999998865
No 76
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=97.62 E-value=9.1e-05 Score=63.32 Aligned_cols=59 Identities=19% Similarity=0.360 Sum_probs=47.3
Q ss_pred cceeeEEEecCCceeeeeC-CCceEEEEEEcEEEEEeCC-C-ceeEEEcCCcEEEEcCCCEE
Q 031109 92 AIWRILRWGCPPSKFPWTY-SDKETCYLLEGKVKVYPDG-S-NEGVEIGAGDLVVFPKGMSC 150 (165)
Q Consensus 92 ~~~~~GiWe~~pg~f~w~y-~~dE~~yVLEG~vtVt~dg-G-~e~v~i~AGDlv~fPkG~~~ 150 (165)
..+.+.+=..+-.+|.||+ +.+|++|+|+|...|...+ | -..++|++||++++|+|...
T Consensus 30 ~~~~V~~vgGpN~R~d~H~~~~dE~FyqlkG~m~l~~~d~g~~~~V~i~eGemfllP~gv~H 91 (286)
T 2qnk_A 30 EQLKVMFIGGPNTRKDYHIEEGEEVFYQLEGDMVLRVLEQGKHRDVVIRQGEIFLLPARVPH 91 (286)
T ss_dssp SSEEEEEECSCBCCCCEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTEEEEECTTCCE
T ss_pred ccEEEEEEeCCCcCccCcCCCCCeEEEEEeCeEEEEEEeCCceeeEEECCCeEEEeCCCCCc
Confidence 4466666666666788885 4699999999999998866 3 23699999999999999854
No 77
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=97.61 E-value=0.00033 Score=63.13 Aligned_cols=61 Identities=10% Similarity=0.165 Sum_probs=45.7
Q ss_pred eeeEEEecCCcee---eeeCCCceEEEEEEcEEEEEeCC--CceeE--EEcCCcEEEEcCCCEEEEEE
Q 031109 94 WRILRWGCPPSKF---PWTYSDKETCYLLEGKVKVYPDG--SNEGV--EIGAGDLVVFPKGMSCTWDV 154 (165)
Q Consensus 94 ~~~GiWe~~pg~f---~w~y~~dE~~yVLEG~vtVt~dg--G~e~v--~i~AGDlv~fPkG~~~tW~V 154 (165)
..+....-.|+.. +||-..+|+.|||+|+++++..+ |++.+ ++++||+++||+|+...-.-
T Consensus 338 is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H~~~n 405 (476)
T 1fxz_A 338 LSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARS 405 (476)
T ss_dssp CCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEE
T ss_pred ceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeEEEEe
Confidence 4556677788874 35556799999999999998744 32344 49999999999998765443
No 78
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=97.58 E-value=6.7e-05 Score=53.32 Aligned_cols=64 Identities=13% Similarity=0.182 Sum_probs=47.4
Q ss_pred cccceeeEEEecCCcee-eeeC--CCceEEEEEEcEEEEEeCCCce-eEEEcCCcEEEEcCCCEEEEE
Q 031109 90 LEAIWRILRWGCPPSKF-PWTY--SDKETCYLLEGKVKVYPDGSNE-GVEIGAGDLVVFPKGMSCTWD 153 (165)
Q Consensus 90 ~~~~~~~GiWe~~pg~f-~w~y--~~dE~~yVLEG~vtVt~dgG~e-~v~i~AGDlv~fPkG~~~tW~ 153 (165)
+++.+++=-|.-.||.- +||. ...|+.||++|+++|+.+|+.. ...+++||.+++|+|......
T Consensus 13 en~~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d~~~~~~~l~~G~~~~ip~G~~H~~~ 80 (98)
T 3lag_A 13 DNDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVR 80 (98)
T ss_dssp ESSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEB
T ss_pred cCCeEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEeCCCceEEEEecCCcEEEEcCCCcEECE
Confidence 33446666688899883 4653 4568888999999999988732 356899999999999876554
No 79
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=97.55 E-value=0.00061 Score=61.68 Aligned_cols=60 Identities=17% Similarity=0.122 Sum_probs=44.7
Q ss_pred eeeEEEecCCcee-eee--CCCceEEEEEEcEEEEEeCC--Ccee--EEEcCCcEEEEcCCCEEEEE
Q 031109 94 WRILRWGCPPSKF-PWT--YSDKETCYLLEGKVKVYPDG--SNEG--VEIGAGDLVVFPKGMSCTWD 153 (165)
Q Consensus 94 ~~~GiWe~~pg~f-~w~--y~~dE~~yVLEG~vtVt~dg--G~e~--v~i~AGDlv~fPkG~~~tW~ 153 (165)
..+....-.|+.. ++| -..+|++|||+|+++++..+ |+.. .++++||+++||+|+...-.
T Consensus 367 ls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~vvP~G~~H~~~ 433 (493)
T 2d5f_A 367 LSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLVVPQNFVVAEQ 433 (493)
T ss_dssp CEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEE
T ss_pred eEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEEECCCCeEeee
Confidence 4456677777773 444 45799999999999998754 3223 35999999999999986644
No 80
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=97.54 E-value=0.00058 Score=62.67 Aligned_cols=57 Identities=16% Similarity=0.302 Sum_probs=45.1
Q ss_pred eeeEEEecCCcee---eeeCCCceEEEEEEcEEEEEeCC--Cce--eEEEcCCcEEEEcCCCEE
Q 031109 94 WRILRWGCPPSKF---PWTYSDKETCYLLEGKVKVYPDG--SNE--GVEIGAGDLVVFPKGMSC 150 (165)
Q Consensus 94 ~~~GiWe~~pg~f---~w~y~~dE~~yVLEG~vtVt~dg--G~e--~v~i~AGDlv~fPkG~~~ 150 (165)
..+......|+.+ +||-..+|+.|||+|+++|+.-+ |+. ..++++||+++||+|+..
T Consensus 394 iS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~v~P~G~~H 457 (531)
T 3fz3_A 394 LSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVPQNHGV 457 (531)
T ss_dssp CEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred eeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEEEECCCCeE
Confidence 4556778888885 46667899999999999987643 322 367999999999999987
No 81
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=97.51 E-value=0.00048 Score=58.67 Aligned_cols=62 Identities=18% Similarity=0.196 Sum_probs=48.6
Q ss_pred eeeEEEecCCcee-e--eeCCCceEEEEEEcEEEEEeC--CC-ceeEEEcCCcEEEEcCCCEEEEEEc
Q 031109 94 WRILRWGCPPSKF-P--WTYSDKETCYLLEGKVKVYPD--GS-NEGVEIGAGDLVVFPKGMSCTWDVS 155 (165)
Q Consensus 94 ~~~GiWe~~pg~f-~--w~y~~dE~~yVLEG~vtVt~d--gG-~e~v~i~AGDlv~fPkG~~~tW~V~ 155 (165)
+.+.+....|+.. + ||-..+|++|||+|+++++.+ +| .+.+.+++||+++||+|....+.-.
T Consensus 257 ~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~ 324 (385)
T 1j58_A 257 IASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPFAMGHYVENI 324 (385)
T ss_dssp CEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEEECTTCBEEEEEC
T ss_pred eEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCCCcEEEEEEcCCCEEEECCCCeEEEEEC
Confidence 5566777788763 3 343348999999999998865 33 2589999999999999999988764
No 82
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=97.50 E-value=0.00046 Score=62.90 Aligned_cols=61 Identities=15% Similarity=0.190 Sum_probs=45.3
Q ss_pred eeeEEEecCCcee---eeeCCCceEEEEEEcEEEEEeCC--CceeE--EEcCCcEEEEcCCCEEEEEE
Q 031109 94 WRILRWGCPPSKF---PWTYSDKETCYLLEGKVKVYPDG--SNEGV--EIGAGDLVVFPKGMSCTWDV 154 (165)
Q Consensus 94 ~~~GiWe~~pg~f---~w~y~~dE~~yVLEG~vtVt~dg--G~e~v--~i~AGDlv~fPkG~~~tW~V 154 (165)
..+......|+.. +||-..+|+.|||+|+++|+..+ |++.+ ++++||+++||+|+...-.-
T Consensus 372 is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~viP~G~~H~~~N 439 (510)
T 3c3v_A 372 LSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLVVPQNFAVAGKS 439 (510)
T ss_dssp CEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEE
T ss_pred EEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEEECCCCeEEEEe
Confidence 4555677777774 35556899999999999998643 33344 49999999999998765443
No 83
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=97.47 E-value=0.0012 Score=53.65 Aligned_cols=62 Identities=13% Similarity=0.127 Sum_probs=50.2
Q ss_pred eeeEEEecCCcee-ee--eCCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEcee
Q 031109 94 WRILRWGCPPSKF-PW--TYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVG 157 (165)
Q Consensus 94 ~~~GiWe~~pg~f-~w--~y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~ 157 (165)
..+-+-.-+||.. ++ +...+|+.|||||+++++.+| +.++++|||.++|+++....|.-...
T Consensus 165 ~~~~~~tl~PG~~~~~~~~h~~ee~~~vLeG~~~~~~~~--~~~~l~~GD~~~~~~~~pH~~~n~g~ 229 (246)
T 1sfn_A 165 FMVSTMSFAPGASLPYAEVHYMEHGLLMLEGEGLYKLEE--NYYPVTAGDIIWMGAHCPQWYGALGR 229 (246)
T ss_dssp EEEEEEEECTTCBCSSCBCCSSCEEEEEEECEEEEEETT--EEEEEETTCEEEECTTCCEEEEEESS
T ss_pred eEEEEEEECCCCccCcccCCCceEEEEEEECEEEEEECC--EEEEcCCCCEEEECCCCCEEEEcCCC
Confidence 4556667777762 32 345689999999999999976 47999999999999999999997654
No 84
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=97.42 E-value=0.0002 Score=61.74 Aligned_cols=61 Identities=15% Similarity=0.121 Sum_probs=48.7
Q ss_pred eeeEEEecCCcee-eee-CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEc
Q 031109 94 WRILRWGCPPSKF-PWT-YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVS 155 (165)
Q Consensus 94 ~~~GiWe~~pg~f-~w~-y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~ 155 (165)
+.+++....|+.. +.| .+..|+.|||+|+.+++.-++ +.+.+++||+++||+|....+.-.
T Consensus 100 l~~~~~~l~PG~~~~~H~H~~~e~~yVl~G~g~~t~v~g-~~~~l~~GD~~~iP~g~~H~~~n~ 162 (354)
T 2d40_A 100 LYAGLQLIMPGEVAPSHRHNQSALRFIVEGKGAFTAVDG-ERTPMNEGDFILTPQWRWHDHGNP 162 (354)
T ss_dssp CEEEEEEECTTCEEEEEEESSCEEEEEEECSSCEEEETT-EEEECCTTCEEEECTTSCEEEECC
T ss_pred EEEEEEEECCCCCcCCeecCcceEEEEEEEEEEEEEECC-EEEEEcCCCEEEECCCCcEEeEeC
Confidence 4678888888874 233 257899999999998843345 589999999999999998888765
No 85
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=97.38 E-value=0.00082 Score=50.30 Aligned_cols=63 Identities=14% Similarity=0.113 Sum_probs=54.1
Q ss_pred eeeEEEecCCce--eeeeCCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEceee
Q 031109 94 WRILRWGCPPSK--FPWTYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVGV 158 (165)
Q Consensus 94 ~~~GiWe~~pg~--f~w~y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~v 158 (165)
-++|+-. ||. |.+.....|++-|+.|+++|...|..+-.++.||+.|.+|++.+-.-+|.+.+
T Consensus 39 kTlGVm~--PGe~~YtF~T~~~E~MevvsG~l~V~Lpg~~eW~~~~aGesF~VpanssF~lkv~~~~ 103 (111)
T 3hqx_A 39 KTLGVIL--PTEQPLTFETHVPERMEIISGECRVKIADSTESELFRAGQSFYVPGNSLFKIETDEVL 103 (111)
T ss_dssp EEEEEEC--CCSSCEEEECSSCEEEEEEESEEEEEETTCSSCEEEETTCEEEECTTCEEEEECSSCE
T ss_pred EEEEEEe--ccccceEEcCCCcEEEEEEEeEEEEEcCCcccCEEeCCCCEEEECCCCcEEEEECcce
Confidence 5677764 566 77778899999999999999999976679999999999999999988887754
No 86
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=97.34 E-value=8.3e-05 Score=59.15 Aligned_cols=50 Identities=20% Similarity=0.253 Sum_probs=39.3
Q ss_pred eeeeC-CCceEEEEEEcEEEEEeC-CCcee--EEEcCCcEEEEcCCCEEEEEEce
Q 031109 106 FPWTY-SDKETCYLLEGKVKVYPD-GSNEG--VEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 106 f~w~y-~~dE~~yVLEG~vtVt~d-gG~e~--v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
|+||+ +.+|+.|||+|+.++... ++ +. +.+++||++++|+|....+...+
T Consensus 93 ~~~H~H~~~Ei~~Vl~G~g~~~i~~~d-~~~~~~l~~GDli~IP~g~~H~~~~~~ 146 (179)
T 1zrr_A 93 LNEHTHGEDEVRFFVEGAGLFCLHIGD-EVFQVLCEKNDLISVPAHTPHWFDMGS 146 (179)
T ss_dssp HSCBEESSCEEEEEEESCCCCCEECSS-CEEEEECCCSCEEEECTTCCBCCCCSS
T ss_pred ccceECChheEEEEEcceEEEEEEeCC-EEEEEEECCCCEEEECCCCeEeeecCC
Confidence 56663 679999999999998763 33 33 66999999999999988776543
No 87
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=97.34 E-value=0.00076 Score=59.89 Aligned_cols=58 Identities=12% Similarity=0.221 Sum_probs=46.2
Q ss_pred EEecCCcee--eeeCCCceEEEEEEcEEEEEe--CCCceeEEEcCCcEEEEcCCCEEEEEEc
Q 031109 98 RWGCPPSKF--PWTYSDKETCYLLEGKVKVYP--DGSNEGVEIGAGDLVVFPKGMSCTWDVS 155 (165)
Q Consensus 98 iWe~~pg~f--~w~y~~dE~~yVLEG~vtVt~--dgG~e~v~i~AGDlv~fPkG~~~tW~V~ 155 (165)
.-...|+.+ |+|.+.+|++||++|++++.. .++.....+++||+++||+|+..-|.-.
T Consensus 48 ~~~l~p~gl~~Phh~~A~ei~yV~~G~g~~g~V~~~~~~~~~l~~GDv~~~P~G~~h~~~N~ 109 (418)
T 3s7i_A 48 QIEAKPNTLVLPKHADADNILVIQQGQATVTVANGNNRKSFNLDEGHALRIPSGFISYILNR 109 (418)
T ss_dssp EEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEEC
T ss_pred EEEecCCceeeeeeCCCCeEEEEEEeeEEEEEEecCCEEEEEecCCCEEEECCCCeEEEEec
Confidence 356667774 566789999999999997765 3343578999999999999999777664
No 88
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=97.26 E-value=0.00051 Score=61.71 Aligned_cols=58 Identities=12% Similarity=0.190 Sum_probs=43.3
Q ss_pred eeEEEecCCcee---eeeCCCceEEEEEEcEEEEEeCC--CceeEE--EcCCcEEEEcCCCEEEE
Q 031109 95 RILRWGCPPSKF---PWTYSDKETCYLLEGKVKVYPDG--SNEGVE--IGAGDLVVFPKGMSCTW 152 (165)
Q Consensus 95 ~~GiWe~~pg~f---~w~y~~dE~~yVLEG~vtVt~dg--G~e~v~--i~AGDlv~fPkG~~~tW 152 (165)
.+..-.-.|+.+ +||-..+|+.||++|+++|+.-+ |...+. +++||+++||+|+...=
T Consensus 323 S~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~v~P~G~~H~~ 387 (459)
T 2e9q_A 323 SAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQNFVVIK 387 (459)
T ss_dssp EEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEE
T ss_pred ceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEEEECCCCEEEE
Confidence 334455567764 36667899999999999988754 434443 99999999999997643
No 89
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=97.24 E-value=0.0011 Score=58.50 Aligned_cols=60 Identities=17% Similarity=0.114 Sum_probs=49.4
Q ss_pred eeeEEEecCCcee-eee-CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEE
Q 031109 94 WRILRWGCPPSKF-PWT-YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDV 154 (165)
Q Consensus 94 ~~~GiWe~~pg~f-~w~-y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V 154 (165)
+.++++...||.. +.| -...|+.|||+|+..++..+| +.+.+++||++++|.|....-.-
T Consensus 123 L~a~~~~l~PG~~~~~HrH~~~ev~~IleG~G~~t~v~G-~~~~~~~GD~i~~P~g~~H~~~N 184 (394)
T 3bu7_A 123 LFSGIQTMKAGERAGAHRHAASALRFIMEGSGAYTIVDG-HKVELGANDFVLTPNGTWHEHGI 184 (394)
T ss_dssp BEEEEEEECTTCBCCCEEESSCEEEEEEECSCEEEEETT-EEEEECTTCEEEECTTCCEEEEE
T ss_pred eEEEEEEECCCCCcCCccCCcceEEEEEEeeEEEEEECC-EEEEEcCCCEEEECcCCCEEEEc
Confidence 5679999999983 433 244699999999998866677 68999999999999999877666
No 90
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=97.20 E-value=0.0006 Score=59.84 Aligned_cols=62 Identities=16% Similarity=0.064 Sum_probs=49.1
Q ss_pred eeeEEEecCCcee-eee-CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEce
Q 031109 94 WRILRWGCPPSKF-PWT-YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 94 ~~~GiWe~~pg~f-~w~-y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
+.++++...||.. +.| ....|++|||+|+..++..+| +.+.+++||+|++|.|......-..
T Consensus 103 L~a~~~~l~PG~~~~~HrH~~~ev~~VleG~G~~~~vdG-~~~~~~~GD~v~iP~g~~H~~~N~g 166 (368)
T 3nw4_A 103 MWAAIQYLGPRETAPEHRHSQNAFRFVVEGEGVWTVVNG-DPVRMSRGDLLLTPGWCFHGHMNDT 166 (368)
T ss_dssp CEEEEEEECTTCEEEEEEESSCEEEECSSCEEEEEEETT-EEEEEETTCEEEECTTCCEEEEECS
T ss_pred eEEEEEEECCCCccCceecccceEEEEEecceEEEEECC-EEEEEeCCCEEEECCCCcEEeEeCC
Confidence 6789999999984 333 345799999999996444445 5899999999999999988777643
No 91
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=97.17 E-value=0.002 Score=58.31 Aligned_cols=69 Identities=16% Similarity=0.202 Sum_probs=57.7
Q ss_pred cceeeEEEecCCce---eeeeCCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEceeeEEEEE
Q 031109 92 AIWRILRWGCPPSK---FPWTYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVGVDKHYK 163 (165)
Q Consensus 92 ~~~~~GiWe~~pg~---f~w~y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~vrK~Y~ 163 (165)
.|..+.+|.+..+- +-..-+.||++++-+|+..|..+=| ...+++||+++||+|+.-.+++.++. .-|+
T Consensus 155 ~G~aI~~y~~n~sM~~~~f~NaDGD~Livpq~G~l~i~TEfG--~L~v~pgei~VIPRGi~frv~l~~p~-Rgyi 226 (471)
T 1eyb_A 155 NGLAIHIFLCNTSMENRCFYNSDGDFLIVPQKGNLLIYTEFG--KMLVQPNEICVIQRGMRFSIDVFEET-RGYI 226 (471)
T ss_dssp CCEEEEEEEECSCCCSEEEEESSEEEEEEEEESCEEEEETTE--EEEECTTEEEEECTTCCEEEECSSSE-EEEE
T ss_pred cceEEEEEeCCCCcccceeecCCCCEEEEEEeCCEEEEEecc--cEEeccCCEEEECCccEEEEeeCCCc-eEEE
Confidence 34688899998773 3445789999999999999999998 69999999999999999999887744 3443
No 92
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=97.17 E-value=0.00067 Score=61.25 Aligned_cols=57 Identities=19% Similarity=0.395 Sum_probs=42.6
Q ss_pred eEEEecCCcee---eeeCCCceEEEEEEcEEEEEeCC--CceeE--EEcCCcEEEEcCCCEEEE
Q 031109 96 ILRWGCPPSKF---PWTYSDKETCYLLEGKVKVYPDG--SNEGV--EIGAGDLVVFPKGMSCTW 152 (165)
Q Consensus 96 ~GiWe~~pg~f---~w~y~~dE~~yVLEG~vtVt~dg--G~e~v--~i~AGDlv~fPkG~~~tW 152 (165)
+..=.-.|+.+ +||-..+|+.|||+|+++|+.-+ |+..+ ++++||+++||+|+-..-
T Consensus 325 ~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~~ 388 (466)
T 3kgl_A 325 ALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSVVK 388 (466)
T ss_dssp EEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEE
T ss_pred eEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEEEECCCCeEEE
Confidence 34445566664 47778999999999999887643 43223 499999999999998754
No 93
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=97.16 E-value=0.00058 Score=62.08 Aligned_cols=55 Identities=15% Similarity=0.254 Sum_probs=41.7
Q ss_pred eEEEecCCcee---eeeCCCceEEEEEEcEEEEEeCC--CceeE--EEcCCcEEEEcCCCEE
Q 031109 96 ILRWGCPPSKF---PWTYSDKETCYLLEGKVKVYPDG--SNEGV--EIGAGDLVVFPKGMSC 150 (165)
Q Consensus 96 ~GiWe~~pg~f---~w~y~~dE~~yVLEG~vtVt~dg--G~e~v--~i~AGDlv~fPkG~~~ 150 (165)
+..=...|+.+ +||-..+|+.|||+|++.|+.-+ |+..+ ++++||+++||+|+-.
T Consensus 360 ~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H 421 (496)
T 3ksc_A 360 AEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAV 421 (496)
T ss_dssp EEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred EEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecCCeEEEECCCCEE
Confidence 34445566664 47778999999999999987643 43333 4999999999999987
No 94
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=97.09 E-value=0.0009 Score=60.41 Aligned_cols=56 Identities=14% Similarity=0.247 Sum_probs=41.8
Q ss_pred eeEEEecCCcee---eeeCCCceEEEEEEcEEEEEeCC--CceeE--EEcCCcEEEEcCCCEE
Q 031109 95 RILRWGCPPSKF---PWTYSDKETCYLLEGKVKVYPDG--SNEGV--EIGAGDLVVFPKGMSC 150 (165)
Q Consensus 95 ~~GiWe~~pg~f---~w~y~~dE~~yVLEG~vtVt~dg--G~e~v--~i~AGDlv~fPkG~~~ 150 (165)
.+..=.-.|+.. +||-..+|+.||++|++.|+.-+ |+..+ ++++||+++||+|+-.
T Consensus 324 S~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVfvvP~g~~h 386 (465)
T 3qac_A 324 SAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLVVVPQNFAI 386 (465)
T ss_dssp EEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred eEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEEEECCCcEE
Confidence 344555667764 47778999999999999877643 43333 4899999999999963
No 95
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=96.98 E-value=0.0028 Score=54.46 Aligned_cols=59 Identities=17% Similarity=0.153 Sum_probs=44.9
Q ss_pred EEEecCCcee---eeeCCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEceee
Q 031109 97 LRWGCPPSKF---PWTYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVGV 158 (165)
Q Consensus 97 GiWe~~pg~f---~w~y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~v 158 (165)
.+=.-.||.. .+|-. .|+.||++|+.+++.++ +...+++||++++|+|........+++
T Consensus 271 ~~~~l~pG~~~~~H~h~~-~ev~~v~~G~g~~~v~~--~~~~~~~GD~~~vP~~~~H~~~n~e~~ 332 (354)
T 2d40_A 271 FLQLLPKGFASRVARTTD-STIYHVVEGSGQVIIGN--ETFSFSAKDIFVVPTWHGVSFQTTQDS 332 (354)
T ss_dssp EEEEECTTCBCCCBEESS-CEEEEEEEEEEEEEETT--EEEEEETTCEEEECTTCCEEEEEEEEE
T ss_pred EEEEECCCCCCCceecCC-cEEEEEEeCeEEEEECC--EEEEEcCCCEEEECCCCeEEEEeCCCE
Confidence 4445566663 34444 59999999999999954 589999999999999987776655553
No 96
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=96.98 E-value=0.0018 Score=57.21 Aligned_cols=62 Identities=11% Similarity=0.079 Sum_probs=48.8
Q ss_pred eeEEEecCCcee--eeeCCCceEEEEEEcEEEEEe--CCCceeEEEcCCcE------EEEcCCCEEEEEEce
Q 031109 95 RILRWGCPPSKF--PWTYSDKETCYLLEGKVKVYP--DGSNEGVEIGAGDL------VVFPKGMSCTWDVSV 156 (165)
Q Consensus 95 ~~GiWe~~pg~f--~w~y~~dE~~yVLEG~vtVt~--dgG~e~v~i~AGDl------v~fPkG~~~tW~V~e 156 (165)
.+..-...|+.+ +++.+.+|+.|||+|+++++. .++.+...+++||+ ++||+|+..-+.-..
T Consensus 53 s~~~~~l~pgg~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g 124 (397)
T 2phl_A 53 RLVEFRSKPETLLLPQQADAELLLVVRSGSAILVLVKPDDRREYFFLTSDNPIFSDHQKIPAGTIFYLVNPD 124 (397)
T ss_dssp EEEEEEECSSEEEEEEEESEEEEEEEEESEEEEEEEETTTEEEEEEEESSCTTSCSEEEECTTCEEEEEECC
T ss_pred EEEEEEECCCcCccCEecCCCeEEEEEeeeEEEEEEeCCCcEEEEECCCCcccccceEEECCCCcEEEEeCC
Confidence 455577788885 444588999999999999885 33436889999999 999999988876543
No 97
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=96.98 E-value=0.0049 Score=55.50 Aligned_cols=66 Identities=15% Similarity=0.067 Sum_probs=48.0
Q ss_pred EecCCcee--eeeCCCceEEEEEEcEEEEEeCC--Cc-----------------------eeEEEcCCcEEEEcCCCEEE
Q 031109 99 WGCPPSKF--PWTYSDKETCYLLEGKVKVYPDG--SN-----------------------EGVEIGAGDLVVFPKGMSCT 151 (165)
Q Consensus 99 We~~pg~f--~w~y~~dE~~yVLEG~vtVt~dg--G~-----------------------e~v~i~AGDlv~fPkG~~~t 151 (165)
-...|+.+ |.+.+.+|++|||+|+.++.... +. ....|++||+++||+|...-
T Consensus 53 ~~l~Pggl~~Ph~~~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~d~~qk~~~l~~GDvi~iPaG~~h~ 132 (476)
T 1fxz_A 53 CTLNRNALRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDRHQKIYNFREGDLIAVPTGVAWW 132 (476)
T ss_dssp EEECTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC------------------CCCCEEEECTTEEEEECTTCEEE
T ss_pred EEEcCCCEecceecCCceEEEEEecEEEEEEEcCCCcchhhccccccccccccccccccceEEEEeCCCEEEECCCCcEE
Confidence 56777776 34447899999999998877643 11 25789999999999999887
Q ss_pred EEEce--eeEEEEEe
Q 031109 152 WDVSV--GVDKHYKF 164 (165)
Q Consensus 152 W~V~e--~vrK~Y~~ 164 (165)
|.-.+ ++.-+.+|
T Consensus 133 ~~N~G~~~l~~i~~~ 147 (476)
T 1fxz_A 133 MYNNEDTPVVAVSII 147 (476)
T ss_dssp EEECSSSCEEEEEEE
T ss_pred EEeCCCCCEEEEEEe
Confidence 77664 44444433
No 98
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=96.97 E-value=0.0049 Score=55.30 Aligned_cols=59 Identities=20% Similarity=0.164 Sum_probs=45.1
Q ss_pred EEecCCcee--eeeCCCceEEEEEEcEEEEEeC--CCc----------------------eeEEEcCCcEEEEcCCCEEE
Q 031109 98 RWGCPPSKF--PWTYSDKETCYLLEGKVKVYPD--GSN----------------------EGVEIGAGDLVVFPKGMSCT 151 (165)
Q Consensus 98 iWe~~pg~f--~w~y~~dE~~yVLEG~vtVt~d--gG~----------------------e~v~i~AGDlv~fPkG~~~t 151 (165)
.-...|+.+ |++.+.+|++|||+|+.++... ++. ....+++||+++||+|...-
T Consensus 67 r~~i~pggl~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~q~~~~l~~GDv~~iPaG~~H~ 146 (459)
T 2e9q_A 67 RHTIRPKGLLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRPFREGDLLVVPAGVSHW 146 (459)
T ss_dssp EEEECTTEEEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEECCCEEEETTEEEEECTTCCEE
T ss_pred EEEEcCCCEecceecCCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccccceeEEecCCCEEEECCCCCEE
Confidence 356678775 3334789999999999999874 321 14689999999999999988
Q ss_pred EEEce
Q 031109 152 WDVSV 156 (165)
Q Consensus 152 W~V~e 156 (165)
|.-.+
T Consensus 147 ~~N~g 151 (459)
T 2e9q_A 147 MYNRG 151 (459)
T ss_dssp EEECS
T ss_pred EEeCC
Confidence 77554
No 99
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=96.96 E-value=0.0013 Score=58.02 Aligned_cols=64 Identities=16% Similarity=0.140 Sum_probs=48.3
Q ss_pred eeeEEEecCCcee---eeeCCCceEEEEEEcEEEEEeCC--------Cce--eEEEcCCcEEEEcCCCEEEEEEcee
Q 031109 94 WRILRWGCPPSKF---PWTYSDKETCYLLEGKVKVYPDG--------SNE--GVEIGAGDLVVFPKGMSCTWDVSVG 157 (165)
Q Consensus 94 ~~~GiWe~~pg~f---~w~y~~dE~~yVLEG~vtVt~dg--------G~e--~v~i~AGDlv~fPkG~~~tW~V~e~ 157 (165)
..+..=.-.|+.+ .||-..+|+.||++|+++++.-+ |+. ..++++||+++||+|+...+.-.+.
T Consensus 239 is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~GDV~vvP~G~~h~~~n~~~ 315 (397)
T 2phl_A 239 VLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKDDVFVIPAAYPVAIKATSN 315 (397)
T ss_dssp EEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETTCEEEECTTCCEEEEESSS
T ss_pred eeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCCCEEEECCCCeEEEEeCCC
Confidence 4555566677775 36667899999999999887653 211 4669999999999999887766654
No 100
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=96.91 E-value=0.0076 Score=45.37 Aligned_cols=60 Identities=15% Similarity=0.137 Sum_probs=43.2
Q ss_pred eeEEEecCCce-eeee-CCCceEEEEEEcEEEEEeCCCcee--EEEcCCcEEEEcCCCEEE-EEEce
Q 031109 95 RILRWGCPPSK-FPWT-YSDKETCYLLEGKVKVYPDGSNEG--VEIGAGDLVVFPKGMSCT-WDVSV 156 (165)
Q Consensus 95 ~~GiWe~~pg~-f~w~-y~~dE~~yVLEG~vtVt~dgG~e~--v~i~AGDlv~fPkG~~~t-W~V~e 156 (165)
.+-+....|+. ++.| .+..|..|||+|+.+... |... .+++|||.+++|+|...+ ....+
T Consensus 45 ~~~~~~~~pG~~~p~H~H~~~ee~~VL~G~~~~~~--g~~~~~~~~~~Gd~~~~p~g~~H~p~~~~e 109 (145)
T 2o1q_A 45 WTAIFDCPAGSSFAAHVHVGPGEYFLTKGKMDVRG--GKAAGGDTAIAPGYGYESANARHDKTEFPV 109 (145)
T ss_dssp EEEEEEECTTEEECCEEESSCEEEEEEEEEEEETT--CGGGTSEEEESSEEEEECTTCEESCCEEEE
T ss_pred EEEEEEECCCCCCCccCCCCCEEEEEEEeEEEEcC--CCEecceEeCCCEEEEECcCCccCCeECCC
Confidence 44556666665 5655 346777999999999543 3235 899999999999999887 43333
No 101
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=96.86 E-value=0.0028 Score=52.60 Aligned_cols=69 Identities=19% Similarity=0.129 Sum_probs=53.0
Q ss_pred eeeEEEecCCcee-ee--eCCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEce--eeEEEEEe
Q 031109 94 WRILRWGCPPSKF-PW--TYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSV--GVDKHYKF 164 (165)
Q Consensus 94 ~~~GiWe~~pg~f-~w--~y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e--~vrK~Y~~ 164 (165)
+.+.+-.-.||.. ++ +....|..|||||+.+++.+| +.++++|||.++++.|-...+.-.. +++-++.+
T Consensus 191 ~~~~~~~l~pG~~i~~~~~h~~e~~~~il~G~~~~~~~~--~~~~v~~GD~~~~~~~~~h~~~n~g~~~~~yl~~~ 264 (278)
T 1sq4_A 191 MHVNIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYRLNQ--DWVEVEAGDFMWLRAFCPQACYSGGPGRFRYLLYK 264 (278)
T ss_dssp EEEEEEEECSSSEESCCCCCSEEEEEEEEECEEEEEETT--EEEEEETTCEEEEEESCCEEEECCSSSCEEEEEEE
T ss_pred eEEEEEEECCCCCcCCCCCCCccEEEEEEeCEEEEEECC--EEEEeCCCCEEEECCCCCEEEEcCCCCCEEEEEEE
Confidence 5667777788773 33 234578999999999999976 4799999999999999998887654 45544443
No 102
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=96.80 E-value=0.0031 Score=55.63 Aligned_cols=64 Identities=11% Similarity=0.134 Sum_probs=46.5
Q ss_pred eeEEEecCCcee---eeeCCCceEEEEEEcEEEEEeCC--C-----------c--eeE--EEcCCcEEEEcCCCEEEEEE
Q 031109 95 RILRWGCPPSKF---PWTYSDKETCYLLEGKVKVYPDG--S-----------N--EGV--EIGAGDLVVFPKGMSCTWDV 154 (165)
Q Consensus 95 ~~GiWe~~pg~f---~w~y~~dE~~yVLEG~vtVt~dg--G-----------~--e~v--~i~AGDlv~fPkG~~~tW~V 154 (165)
.+..=...|+.. +||-..+|+.||++|++++..-+ | . ..+ ++++||+++||+|+.....-
T Consensus 250 s~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n 329 (416)
T 1uij_A 250 FLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNA 329 (416)
T ss_dssp EEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC------------CCEEEEEEEEETTCEEEECTTCCEEEEE
T ss_pred ceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCCCccccccccccccceEEEEEEecCCcEEEECCCCeEEEEc
Confidence 334556677775 36667899999999999886532 2 0 145 89999999999999887765
Q ss_pred ceee
Q 031109 155 SVGV 158 (165)
Q Consensus 155 ~e~v 158 (165)
.+.+
T Consensus 330 ~~~~ 333 (416)
T 1uij_A 330 TSNL 333 (416)
T ss_dssp SSSE
T ss_pred CCCe
Confidence 5543
No 103
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=96.79 E-value=0.005 Score=52.59 Aligned_cols=72 Identities=14% Similarity=0.085 Sum_probs=52.2
Q ss_pred ccccccceeeEEEecCCceeeee-CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEceeeEEEE
Q 031109 87 KTHLEAIWRILRWGCPPSKFPWT-YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVGVDKHY 162 (165)
Q Consensus 87 ~~~~~~~~~~GiWe~~pg~f~w~-y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~vrK~Y 162 (165)
.|++.....+-+ .++|+..-. -..|=.+++|||+..|+.++. .+.+++||++.||+|...+|...+.-+-.+
T Consensus 202 LFg~~~eteV~l--~G~Ges~~~~~~~d~wiWqLEGss~Vt~~~q--~~~L~~~DsLLIpa~~~y~~~r~~gsv~L~ 274 (286)
T 2qnk_A 202 LFGDTYETQVIA--YGQGSSEGLRQNVDVWLWQLEGSSVVTMGGR--RLSLAPDDSLLVLAGTSYAWERTQGSVALS 274 (286)
T ss_dssp SSCTTSSEEEEE--ECSEEEEECCCSSCEEEEEEESCEEEEETTE--EEEECTTEEEEECTTCCEEEEECTTCEEEE
T ss_pred cccCCCceEEEE--EcCCccccccCcCcEEEEEEcCceEEEECCe--EEeccCCCEEEecCCCeEEEEecCCeEEEE
Confidence 454433355555 444444322 233889999999999999875 799999999999999999999866544443
No 104
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=96.73 E-value=0.014 Score=52.73 Aligned_cols=56 Identities=25% Similarity=0.303 Sum_probs=41.1
Q ss_pred EecCCcee--e-eeCCCceEEEEEEcEEEEEe--CCCce--------------------------------------eEE
Q 031109 99 WGCPPSKF--P-WTYSDKETCYLLEGKVKVYP--DGSNE--------------------------------------GVE 135 (165)
Q Consensus 99 We~~pg~f--~-w~y~~dE~~yVLEG~vtVt~--dgG~e--------------------------------------~v~ 135 (165)
-..+|+.+ | || +.+|+.||++|+..+.. .+..+ ...
T Consensus 55 ~~i~P~gl~~Ph~h-~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqk~~~ 133 (465)
T 3qac_A 55 RTIEPHGLLLPSFT-SAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDERIREQGSRKFGMRGDRFQDQHQKIRH 133 (465)
T ss_dssp EEECTTEEEEEEEE-SSCEEEEEEECEEEEEEECTTCCCCC------------------------------CCCCCCEEE
T ss_pred EEEcCCcCcccEEc-CCCEEEEEEECcEEEEEecCCCCceeecchhccccccccccccccccccccccccccccccceee
Confidence 45577774 2 44 89999999999997763 33212 348
Q ss_pred EcCCcEEEEcCCCEEEEEEc
Q 031109 136 IGAGDLVVFPKGMSCTWDVS 155 (165)
Q Consensus 136 i~AGDlv~fPkG~~~tW~V~ 155 (165)
|++||+++||+|...-|.-.
T Consensus 134 ~~~GDvi~iPaG~~hw~~N~ 153 (465)
T 3qac_A 134 LREGDIFAMPAGVSHWAYNN 153 (465)
T ss_dssp EETTEEEEECTTCEEEEECC
T ss_pred ecCCCEEEECCCCeEEEEcC
Confidence 99999999999998655543
No 105
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=96.73 E-value=0.0014 Score=58.33 Aligned_cols=62 Identities=16% Similarity=0.193 Sum_probs=44.3
Q ss_pred eEEEecCCcee---eeeCCCceEEEEEEcEEEEEeCCC------------ce--eE--EEcCCcEEEEcCCCEEEEEEce
Q 031109 96 ILRWGCPPSKF---PWTYSDKETCYLLEGKVKVYPDGS------------NE--GV--EIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 96 ~GiWe~~pg~f---~w~y~~dE~~yVLEG~vtVt~dgG------------~e--~v--~i~AGDlv~fPkG~~~tW~V~e 156 (165)
+..=...|+.. .||-..+|+.||++|++.++.-+. .. .+ ++++||+++||+|+...-.-.+
T Consensus 268 ~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~~ 347 (434)
T 2ea7_A 268 ISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINATS 347 (434)
T ss_dssp EEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEESS
T ss_pred eEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEecCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcCC
Confidence 33555667764 366678999999999998865432 11 34 7899999999999977654444
Q ss_pred e
Q 031109 157 G 157 (165)
Q Consensus 157 ~ 157 (165)
.
T Consensus 348 ~ 348 (434)
T 2ea7_A 348 N 348 (434)
T ss_dssp S
T ss_pred C
Confidence 3
No 106
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=96.67 E-value=0.0078 Score=53.11 Aligned_cols=59 Identities=8% Similarity=-0.026 Sum_probs=46.2
Q ss_pred eeEEEecCCcee-eee-CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEc
Q 031109 95 RILRWGCPPSKF-PWT-YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVS 155 (165)
Q Consensus 95 ~~GiWe~~pg~f-~w~-y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~ 155 (165)
.+++-...||.. +.| -..+|++|||||+..++.+| +.+.+++||+|++|.|......-.
T Consensus 295 ~~~~~~l~PG~~~~~HrH~~~~v~~VleG~G~~~V~g--e~~~~~~GD~~~iP~g~~H~~~N~ 355 (394)
T 3bu7_A 295 GASMQMLRPGEHTKAHRHTGNVIYNVAKGQGYSIVGG--KRFDWSEHDIFCVPAWTWHEHCNT 355 (394)
T ss_dssp EEEEEEECTTCBCCCEEESSCEEEEEEECCEEEEETT--EEEEECTTCEEEECTTCCEEEEEC
T ss_pred eEEEEEECCCCcCCCcccCCcEEEEEEeCeEEEEECC--EEEEEeCCCEEEECCCCeEEeEeC
Confidence 456667777774 222 35679999999999888865 589999999999999988777653
No 107
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=96.66 E-value=0.016 Score=52.46 Aligned_cols=60 Identities=13% Similarity=0.071 Sum_probs=46.0
Q ss_pred EEEecCCcee--eeeCCCceEEEEEEcEEEEEeCC--C--------------------------ceeEEEcCCcEEEEcC
Q 031109 97 LRWGCPPSKF--PWTYSDKETCYLLEGKVKVYPDG--S--------------------------NEGVEIGAGDLVVFPK 146 (165)
Q Consensus 97 GiWe~~pg~f--~w~y~~dE~~yVLEG~vtVt~dg--G--------------------------~e~v~i~AGDlv~fPk 146 (165)
..-...|+.+ |++.+..|++||++|+.++.... + .....|++||+++||+
T Consensus 48 ~r~~i~pggl~~Ph~~~~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~~~~~d~~qkv~~l~~GDvi~iPa 127 (493)
T 2d5f_A 48 SKRTLNRNGLHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQLQDSHQKIRHFNEGDVLVIPP 127 (493)
T ss_dssp EEEEECTTEEEEEEECSSCEEEEEEECEEEEEECCTTCCCCEEECC-------------CSEEESCEEEEETTEEEEECT
T ss_pred EEEEeCCCcEeCceecCCCeEEEEEeCEEEEEEEeCCCccccccccccccccccccccccccccceEEEecCCCEEEECC
Confidence 3467788886 33447899999999999997651 1 1257899999999999
Q ss_pred CCEEEEEEce
Q 031109 147 GMSCTWDVSV 156 (165)
Q Consensus 147 G~~~tW~V~e 156 (165)
|...-|.-..
T Consensus 128 G~~h~~~N~g 137 (493)
T 2d5f_A 128 GVPYWTYNTG 137 (493)
T ss_dssp TCCEEEEECS
T ss_pred CCcEEEEeCC
Confidence 9988877654
No 108
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=96.62 E-value=0.0021 Score=57.33 Aligned_cols=60 Identities=13% Similarity=0.185 Sum_probs=43.1
Q ss_pred eeeEEEecCCcee---eeeCCCceEEEEEEcEEEEEeCCC----------ce----eEEEcCCcEEEEcCCCEEEEE
Q 031109 94 WRILRWGCPPSKF---PWTYSDKETCYLLEGKVKVYPDGS----------NE----GVEIGAGDLVVFPKGMSCTWD 153 (165)
Q Consensus 94 ~~~GiWe~~pg~f---~w~y~~dE~~yVLEG~vtVt~dgG----------~e----~v~i~AGDlv~fPkG~~~tW~ 153 (165)
..+..=.-.|+.. .||-..+|+.||++|++++..-+. +. ..++++||+++||+|+-..-.
T Consensus 281 is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~ 357 (445)
T 2cav_A 281 ILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALK 357 (445)
T ss_dssp EEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC-----------CCEEEEEEECTTCEEEECTTCCEEEE
T ss_pred CceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCCCcccccccCcceEEEEeEecCCcEEEEcCCcEEEEE
Confidence 3445556677774 367789999999999888765322 12 455999999999999866433
No 109
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=96.55 E-value=0.017 Score=52.56 Aligned_cols=58 Identities=14% Similarity=0.203 Sum_probs=42.0
Q ss_pred EecCCcee--eeeCCCceEEEEEEcEEEEEe--CCCcee----------------------EEEcCCcEEEEcCCCEEEE
Q 031109 99 WGCPPSKF--PWTYSDKETCYLLEGKVKVYP--DGSNEG----------------------VEIGAGDLVVFPKGMSCTW 152 (165)
Q Consensus 99 We~~pg~f--~w~y~~dE~~yVLEG~vtVt~--dgG~e~----------------------v~i~AGDlv~fPkG~~~tW 152 (165)
-...|+.+ |++....|++||++|+..+.. .+..+. ..|++||+|+||+|+..-+
T Consensus 51 ~~i~pggl~lPh~~~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~viPaG~~h~~ 130 (496)
T 3ksc_A 51 ATLQRNALRRPYYSNAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRHQKVNRFREGDIIAVPTGIVFWM 130 (496)
T ss_dssp EEECTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC---------------CCCCCCEEEECTTEEEEECTTCEEEE
T ss_pred EEecCCCEeCceEcCCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccccchheeeccCCCCEEEECCCCcEEE
Confidence 45577774 443489999999999987765 221122 4899999999999988665
Q ss_pred EEce
Q 031109 153 DVSV 156 (165)
Q Consensus 153 ~V~e 156 (165)
.-..
T Consensus 131 ~N~G 134 (496)
T 3ksc_A 131 YNDQ 134 (496)
T ss_dssp EECS
T ss_pred EcCC
Confidence 5443
No 110
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=96.48 E-value=0.034 Score=50.66 Aligned_cols=68 Identities=13% Similarity=0.078 Sum_probs=48.8
Q ss_pred EEEecCCcee--eeeCCCceEEEEEEcEEEEEeCC--Cc------------------------------------eeEEE
Q 031109 97 LRWGCPPSKF--PWTYSDKETCYLLEGKVKVYPDG--SN------------------------------------EGVEI 136 (165)
Q Consensus 97 GiWe~~pg~f--~w~y~~dE~~yVLEG~vtVt~dg--G~------------------------------------e~v~i 136 (165)
..-...|+.+ |.+.+..|++||++|+.++.... +. ....|
T Consensus 51 ~r~~i~p~gl~lPh~~~a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~qkv~~v 130 (510)
T 3c3v_A 51 SRLVLRRNALRRPFYSNAPQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRPPRRLQEEDQSQQQQDSHQKVHRF 130 (510)
T ss_dssp EEEEECTTEEEEEEECSSCEEEEEEECCEEEEEECTTCCCCEEEECCC--------------------CEEEEESCCEEE
T ss_pred EEEEECCCCCccceecCCCeEEEEEeCEEEEEEEeCCCccccccccccccccccccccccccccccccccccccceEEEe
Confidence 3467778875 33457899999999998887643 10 13689
Q ss_pred cCCcEEEEcCCCEEEEEEce--eeEEEEEe
Q 031109 137 GAGDLVVFPKGMSCTWDVSV--GVDKHYKF 164 (165)
Q Consensus 137 ~AGDlv~fPkG~~~tW~V~e--~vrK~Y~~ 164 (165)
++||+++||+|...-|.-.. ++.-+.++
T Consensus 131 ~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~ 160 (510)
T 3c3v_A 131 NEGDLIAVPTGVAFWLYNDHDTDVVAVSLT 160 (510)
T ss_dssp CTTEEEEECTTCEEEEEECSSSCEEEEEEE
T ss_pred cCCCEEEECCCCCEEEEeCCCCCEEEEEEe
Confidence 99999999999998887664 44444433
No 111
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=96.44 E-value=0.015 Score=48.76 Aligned_cols=61 Identities=16% Similarity=0.152 Sum_probs=48.9
Q ss_pred eeeEEEecCCcee-ee--eCCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEce
Q 031109 94 WRILRWGCPPSKF-PW--TYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 94 ~~~GiWe~~pg~f-~w--~y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
..+-+-.-+||.. ++ +-...|..|||+|+..++.++. .++++|||.++++++......-..
T Consensus 186 ~~~~~~t~~PG~~~p~~e~H~~eh~~~vL~G~g~y~l~~~--~~~V~~GD~i~~~~~~~h~~~n~G 249 (266)
T 4e2q_A 186 FNIHTMDFQPGEFLNVKEVHYNQHGLLLLEGQGIYRLGDN--WYPVQAGDVIWMAPFVPQWYAALG 249 (266)
T ss_dssp EEEEEEEECTTCBCSSCCCCSCCEEEEEEECEEEEEETTE--EEEEETTCEEEECTTCCEEEEEES
T ss_pred eEEEEEEECCCcCcCCceEcccceEEEEEeceEEEEECCE--EEEecCCCEEEECCCCcEEEEeCC
Confidence 4456778888884 33 3456799999999999999875 799999999999999877766643
No 112
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=96.17 E-value=0.026 Score=49.46 Aligned_cols=62 Identities=16% Similarity=0.167 Sum_probs=49.2
Q ss_pred eeEEEecCCcee--eeeCCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEceee
Q 031109 95 RILRWGCPPSKF--PWTYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVGV 158 (165)
Q Consensus 95 ~~GiWe~~pg~f--~w~y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~v 158 (165)
.+.++...||.- ++.-...+++||+||+.+++.++ +.+++++||+|++|.|......-.+..
T Consensus 280 ~~~~~~L~pG~~t~~hRht~s~Vy~V~eG~G~~~I~~--~~~~w~~gD~fvvP~w~~h~~~n~~~a 343 (368)
T 3nw4_A 280 RCEFHRLRAGTETATRNEVGSTVFQVFEGAGAVVMNG--ETTKLEKGDMFVVPSWVPWSLQAETQF 343 (368)
T ss_dssp EEEEEEECTTCBCCCEEESSCEEEEEEESCEEEEETT--EEEEECTTCEEEECTTCCEEEEESSSE
T ss_pred HhheEEECCCCccCCeeccccEEEEEEeCcEEEEECC--EEEEecCCCEEEECCCCcEEEEeCCCE
Confidence 445677777763 22234679999999999999987 479999999999999998888766654
No 113
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=96.16 E-value=0.019 Score=44.75 Aligned_cols=60 Identities=17% Similarity=0.217 Sum_probs=44.7
Q ss_pred eeeEEEecCCce-eeee-CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEce
Q 031109 94 WRILRWGCPPSK-FPWT-YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 94 ~~~GiWe~~pg~-f~w~-y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
..+-+....||. ++.| .+..|..|||+|++... +++ ...++|||.+..|.|...+....+
T Consensus 43 ~~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~f~~~-~~~--~~~~~aGd~~~~P~g~~H~~~a~~ 104 (165)
T 3cjx_A 43 LMVMRASFAPGLTLPLHFHTGTVHMYTISGCWYYT-EYP--GQKQTAGCYLYEPGGSIHQFNTPR 104 (165)
T ss_dssp EEEEEEEECTTCBCCEEEESSCEEEEEEESEEEET-TCT--TSCEETTEEEEECTTCEECEECCT
T ss_pred cEEEEEEECCCCcCCcccCCCCEEEEEEEEEEEEC-CCc--eEEECCCeEEEeCCCCceeeEeCC
Confidence 344455555554 6655 45799999999999873 222 477999999999999998887765
No 114
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=96.04 E-value=0.014 Score=46.58 Aligned_cols=56 Identities=16% Similarity=0.206 Sum_probs=43.8
Q ss_pred EecCCceeeeeC-CCceEEEEEEcEEEEEeCCCce-eEEEcCCcEEEEcCCCEEEEEEc
Q 031109 99 WGCPPSKFPWTY-SDKETCYLLEGKVKVYPDGSNE-GVEIGAGDLVVFPKGMSCTWDVS 155 (165)
Q Consensus 99 We~~pg~f~w~y-~~dE~~yVLEG~vtVt~dgG~e-~v~i~AGDlv~fPkG~~~tW~V~ 155 (165)
++-....|+.|+ +.-|++||++|+++ ..++... .+++.+||++++|+|....|...
T Consensus 15 ~~~~~~~~~~~~~~~~~i~~v~~G~~~-~i~~~~~~~~~l~~g~l~~i~p~~~h~~~~~ 72 (276)
T 3gbg_A 15 SKFDTYIFNNLYINDYKMFWIDSGIAK-LIDKNCLVSYEINSSSIILLKKNSIQRFSLT 72 (276)
T ss_dssp CTTCEEEEEEEECSSCEEEEESSSCEE-EEETTTTEEEEECTTEEEEECTTCEEEEEEE
T ss_pred hcccchhccHhhhcceEEEEEecCceE-EECCccceeEEEcCCCEEEEcCCCceeeccc
Confidence 333334455554 67899999999999 7775311 69999999999999999999887
No 115
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=96.03 E-value=0.01 Score=52.58 Aligned_cols=64 Identities=8% Similarity=0.076 Sum_probs=45.5
Q ss_pred eeeEEEecCCcee---eeeCCCceEEEEEEcEEEEEeC--CC-------------------------ce-eEEEcCCcEE
Q 031109 94 WRILRWGCPPSKF---PWTYSDKETCYLLEGKVKVYPD--GS-------------------------NE-GVEIGAGDLV 142 (165)
Q Consensus 94 ~~~GiWe~~pg~f---~w~y~~dE~~yVLEG~vtVt~d--gG-------------------------~e-~v~i~AGDlv 142 (165)
..+..=...|+.. .||-...|+.||++|+..+..- ++ .. ..++++||++
T Consensus 263 is~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~ 342 (418)
T 3s7i_A 263 MMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVF 342 (418)
T ss_dssp CEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEEC-------------------CCEEEEEEEEEECTTCEE
T ss_pred eeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCCccccccccccccccccccccccccceEEEeeeCCCCEE
Confidence 3445556677774 3555789999999999876543 22 01 3668999999
Q ss_pred EEcCCCEEEEEEcee
Q 031109 143 VFPKGMSCTWDVSVG 157 (165)
Q Consensus 143 ~fPkG~~~tW~V~e~ 157 (165)
+||+|+-..+.-.++
T Consensus 343 vvP~G~~~~~~~~~~ 357 (418)
T 3s7i_A 343 IMPAAHPVAINASSE 357 (418)
T ss_dssp EECTTCCEEEEESSC
T ss_pred EECCCCEEEEECCCC
Confidence 999999887765544
No 116
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=95.98 E-value=0.05 Score=49.06 Aligned_cols=31 Identities=13% Similarity=0.247 Sum_probs=23.4
Q ss_pred eEEEecCCcee--eeeCCCceEEEEEEcEEEEE
Q 031109 96 ILRWGCPPSKF--PWTYSDKETCYLLEGKVKVY 126 (165)
Q Consensus 96 ~GiWe~~pg~f--~w~y~~dE~~yVLEG~vtVt 126 (165)
+..-...|+.+ |++.+..|+.||++|+.++.
T Consensus 45 ~~r~~i~p~Gl~lPh~~~a~e~~~V~~G~g~~G 77 (466)
T 3kgl_A 45 FVRYIIESKGLYLPSFFSTAKLSFVAKGEGLMG 77 (466)
T ss_dssp EEEEEECTTEEEEEEEESSCEEEEEEECEEEEE
T ss_pred EEEEEECCCCEeCCeeCCCCeEEEEEeCeEEEE
Confidence 34467777775 44457999999999998775
No 117
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=95.92 E-value=0.063 Score=42.62 Aligned_cols=61 Identities=20% Similarity=0.264 Sum_probs=47.2
Q ss_pred eeeEEEecCCce-eeeeC--C------CceEEEEEEcEEEEEeCCCc-------------------eeEEEcCCcEEEEc
Q 031109 94 WRILRWGCPPSK-FPWTY--S------DKETCYLLEGKVKVYPDGSN-------------------EGVEIGAGDLVVFP 145 (165)
Q Consensus 94 ~~~GiWe~~pg~-f~w~y--~------~dE~~yVLEG~vtVt~dgG~-------------------e~v~i~AGDlv~fP 145 (165)
...-+....|+. .|.|+ . ..|.++++.|.++|..+++. ..+.++|||.+.+|
T Consensus 53 Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIp 132 (175)
T 2y0o_A 53 YCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIP 132 (175)
T ss_dssp EEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEEC
T ss_pred ceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEEC
Confidence 445667777777 35554 4 55999999999999997642 12699999999999
Q ss_pred CCCEEEEEE
Q 031109 146 KGMSCTWDV 154 (165)
Q Consensus 146 kG~~~tW~V 154 (165)
.|....+..
T Consensus 133 pg~~H~f~a 141 (175)
T 2y0o_A 133 PNTKHWFQA 141 (175)
T ss_dssp TTCCEEEEE
T ss_pred CCCcEEEEe
Confidence 999888865
No 118
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=95.89 E-value=0.025 Score=43.59 Aligned_cols=59 Identities=15% Similarity=0.094 Sum_probs=45.3
Q ss_pred ceeeEEEecCCce-eeee-CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEc
Q 031109 93 IWRILRWGCPPSK-FPWT-YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVS 155 (165)
Q Consensus 93 ~~~~GiWe~~pg~-f~w~-y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~ 155 (165)
+..+-+...+|+. ++.| .+..|..|||+|+..+. +++ ..+.|||.++.|+|...+....
T Consensus 41 g~~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~~-e~~---~~~~~Gd~~~~P~g~~H~~~~~ 101 (159)
T 3ebr_A 41 GETITLLKAPAGMEMPRHHHTGTVIVYTVQGSWRYK-EHD---WVAHAGSVVYETASTRHTPQSA 101 (159)
T ss_dssp TEEEEEEEECSSCBCCCEEESSCEEEEEEESCEEET-TSS---CCBCTTCEEEECSSEEECEEES
T ss_pred CeEEEEEEECCCCCcccccCCCCEEEEEEEeEEEEe-CCC---eEECCCeEEEECCCCcceeEeC
Confidence 3555666666766 5655 45789999999999874 222 5899999999999999988876
No 119
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=95.70 E-value=0.031 Score=44.15 Aligned_cols=68 Identities=16% Similarity=0.061 Sum_probs=46.4
Q ss_pred CeeecccccccccceeeEEEecCCce-eeee-CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEE
Q 031109 80 PRVLPSKKTHLEAIWRILRWGCPPSK-FPWT-YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDV 154 (165)
Q Consensus 80 P~~~~~~~~~~~~~~~~GiWe~~pg~-f~w~-y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V 154 (165)
|.......+.++ ...+-+....||. ++.| .+..|+.|||+|++. ++ ...+.+||.+++|.|...+...
T Consensus 112 ~Gv~~~~L~~~~-~~~v~l~~~~pG~~~p~H~H~g~E~~~VL~G~f~--de----~~~~~~Gd~~~~p~g~~H~p~a 181 (195)
T 2q1z_B 112 GGVRQAILPTGG-EAIARLLWIPGGQAVPDHGHRGLELTLVLQGAFR--DE----TDRFGAGDIEIADQELEHTPVA 181 (195)
T ss_dssp SSCEEEEECCSS-SSEEEEEEECTTCBCCCCCCSSCEEEEEEESEEE--CS----SSEEETTCEEEECSSCCCCCEE
T ss_pred CCeEEEEEecCC-CcEEEEEEECCCCCCCCcCCCCeEEEEEEEEEEE--CC----cEEECCCeEEEeCcCCccCCEe
Confidence 333333333333 3344566666666 5655 477999999999976 22 3579999999999999887666
No 120
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=95.47 E-value=0.093 Score=42.54 Aligned_cols=58 Identities=19% Similarity=0.151 Sum_probs=44.2
Q ss_pred eeeEEEecCCce-eeee-CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEcee
Q 031109 94 WRILRWGCPPSK-FPWT-YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVG 157 (165)
Q Consensus 94 ~~~GiWe~~pg~-f~w~-y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~ 157 (165)
..+-+..-+|+. ++.| .+..|..|||+|++. ++ ...+.|||.+..|+|...+....+.
T Consensus 43 ~~~~lvr~~pG~~~p~H~H~g~Ee~~VL~G~f~--d~----~~~~~~Gd~~~~P~g~~H~p~a~~g 102 (223)
T 3o14_A 43 RATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQ--DE----HGDYPAGTYVRNPPTTSHVPGSAEG 102 (223)
T ss_dssp EEEEEEEECTTEECCCEECTTCEEEEEEEEEEE--ET----TEEEETTEEEEECTTCEECCEESSC
T ss_pred cEEEEEEECCCCCcccccCCCCEEEEEEEeEEE--EC----CeEECCCeEEEeCCCCccccEeCCC
Confidence 345566667776 6655 458999999999986 22 3689999999999999887766544
No 121
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=94.87 E-value=0.17 Score=39.23 Aligned_cols=60 Identities=17% Similarity=0.159 Sum_probs=43.0
Q ss_pred ceeeEEEecCCce-eeee-CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEE
Q 031109 93 IWRILRWGCPPSK-FPWT-YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTW 152 (165)
Q Consensus 93 ~~~~GiWe~~pg~-f~w~-y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW 152 (165)
+..+-+=...|+. |+.| .+..|.+|||+|.......+-.....++||+.++-|+|...+.
T Consensus 45 g~~t~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~~~Gd~~~~~~~~aGsYv~ePpGs~H~p 106 (153)
T 3bal_A 45 SSWTAIFNCPAGSSFASHIHAGPGEYFLTKGKMEVRGGEQEGGSTAYAPSYGFESSGALHGK 106 (153)
T ss_dssp TEEEEEEEECTTEEECCEEESSCEEEEEEESEEEETTCGGGTSEEEESSEEEEECTTCEESC
T ss_pred ceEEEEEEeCCCCCccCccCCCCEEEEEEEEEEEecCccccCccccCCCeEEEcCCCCcccc
Confidence 3444455666665 6766 4679999999999976432210137889999999999999983
No 122
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=94.85 E-value=0.17 Score=44.25 Aligned_cols=67 Identities=7% Similarity=0.080 Sum_probs=47.8
Q ss_pred eeeEEEecCCceeeeeCCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCC-EEEEEEceeeEEEE
Q 031109 94 WRILRWGCPPSKFPWTYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGM-SCTWDVSVGVDKHY 162 (165)
Q Consensus 94 ~~~GiWe~~pg~f~w~y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~-~~tW~V~e~vrK~Y 162 (165)
+.+-.|...++......+.-.++.+++|+++|..++ +...+++||.|++|++. ..+.+-...+-+.|
T Consensus 324 F~v~~~~l~~~~~~~~~~~~~il~v~~G~~~l~~~~--~~~~l~~G~~~fvpa~~~~~~i~g~~~~~~~~ 391 (394)
T 2wfp_A 324 FAFSLHDLALQETSIGQHSAAILFCVEGEAVLRKDE--QRLVLKPGESAFIGADESPVNASGTGRLARVY 391 (394)
T ss_dssp CEEEEEECCSSCEEECCSSCEEEEEEEEEEEEEETT--EEEEECTTCEEEECGGGCCEEEEEEEEEEEEE
T ss_pred EEEEEEEEcCCeEEecCCCcEEEEEEeceEEEEECC--eEEEEccCcEEEEeCCCceEEEEeeeEEEEEE
Confidence 667777665555444445568999999999999865 36899999999999984 44444333343444
No 123
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=94.61 E-value=0.094 Score=43.29 Aligned_cols=58 Identities=19% Similarity=0.234 Sum_probs=44.5
Q ss_pred EEecCCcee---eeeCCCceEEEEEEcEEEEE---eCCCceeEEEcC-C---cEEEEcCCCEEEEEEce
Q 031109 98 RWGCPPSKF---PWTYSDKETCYLLEGKVKVY---PDGSNEGVEIGA-G---DLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 98 iWe~~pg~f---~w~y~~dE~~yVLEG~vtVt---~dgG~e~v~i~A-G---Dlv~fPkG~~~tW~V~e 156 (165)
+-...|+.. .||....|..++|+|++.|. +..| +.+++.. | |.+.+|+|+........
T Consensus 276 ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ip~g~~h~~~n~~ 343 (369)
T 3st7_A 276 VNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDD-EIIEYYVSGDKLEVVDIPVGYTHNIENLG 343 (369)
T ss_dssp EEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCC-CCEEEEEETTBCCEEEECTTEEEEEEECS
T ss_pred EEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCCC-cEEEEEecCCcceEEEeCCCceEEeEEcC
Confidence 444566653 44556789999999999994 3445 5788888 8 99999999988877754
No 124
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=93.53 E-value=0.54 Score=41.85 Aligned_cols=69 Identities=13% Similarity=0.078 Sum_probs=49.4
Q ss_pred cccccccc-eeeEEEecC--Cc-eeee-eCCCceEEEEEEcEEEEEeCCCcee-EEEcCCcEEEEcCCCEEEEEE
Q 031109 86 KKTHLEAI-WRILRWGCP--PS-KFPW-TYSDKETCYLLEGKVKVYPDGSNEG-VEIGAGDLVVFPKGMSCTWDV 154 (165)
Q Consensus 86 ~~~~~~~~-~~~GiWe~~--pg-~f~w-~y~~dE~~yVLEG~vtVt~dgG~e~-v~i~AGDlv~fPkG~~~tW~V 154 (165)
..|..+.. +.+-.|... ++ +... ..+.-.++.+++|+++|..+++... ..+++||.|++|++-.++.+-
T Consensus 348 ~~y~~P~~eF~v~~~~~~~~~~~~~~~~~~~~~~illv~~G~g~i~~~~~~~~~~~l~~G~~~fvpa~~~~~i~g 422 (440)
T 1pmi_A 348 VLYDPPIAEFSVLQTIFDKSKGGKQVIEGLNGPSIVIATNGKGTIQITGDDSTKQKIDTGYVFFVAPGSSIELTA 422 (440)
T ss_dssp EEECCSSSSCEEEEEECCTTTCCEEEECCCSSCEEEEEEESEEEEEETTCGGGCEEEETTCEEEECTTCCEEEEE
T ss_pred EEECCCCCeEEEEEEEecCCCCceeEEecCCCcEEEEEEeCeEEEEeCCcccceEEeccCCEEEEeCCCcEEEEE
Confidence 34555433 788888876 44 3443 3456789999999999998665112 799999999999996555554
No 125
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=93.41 E-value=0.4 Score=38.36 Aligned_cols=79 Identities=14% Similarity=0.175 Sum_probs=53.0
Q ss_pred ccCCCCcccCCCCeeeccc-ccccccc-eeeEEEecCCcee-eee-CCCceEEEEEEcEEEEEe----CCC-----ceeE
Q 031109 68 RQWPKHCHTGGQPRVLPSK-KTHLEAI-WRILRWGCPPSKF-PWT-YSDKETCYLLEGKVKVYP----DGS-----NEGV 134 (165)
Q Consensus 68 ~~Wp~~~~~~G~P~~~~~~-~~~~~~~-~~~GiWe~~pg~f-~w~-y~~dE~~yVLEG~vtVt~----dgG-----~e~v 134 (165)
..|-.......+|.....+ .+.++++ +++-+-.-.||+. +.| .....+++||+|+.+.+. ++| .+..
T Consensus 51 ~~wl~~~~~~~~~~~y~r~lL~~dp~~~~~v~~l~w~PGq~spiHdH~~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~ 130 (208)
T 2gm6_A 51 DDWLPDAFAQPHPEYYQQMLLHCDSAERFSIVSFVWGPGQRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPT 130 (208)
T ss_dssp CCSCCGGGSCCCSSSCEEEEEEECTTSSCEEEEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCE
T ss_pred chhhhhhhcCCCccceeEEEeecCCCCCEEEEEEEeCCCcccCcccCCcceEEEEecccEEEEEeecCCCCccccccceE
Confidence 4675555566677665544 4555544 6665555556664 333 445899999999998764 332 1368
Q ss_pred EEcCCcEEEEcC
Q 031109 135 EIGAGDLVVFPK 146 (165)
Q Consensus 135 ~i~AGDlv~fPk 146 (165)
.+++||.+.|+.
T Consensus 131 ~l~~G~v~~~~~ 142 (208)
T 2gm6_A 131 RLEPGHVEAVSP 142 (208)
T ss_dssp EECTTCEEEEBT
T ss_pred EeCCCCEEEECC
Confidence 899999999999
No 126
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=93.39 E-value=0.7 Score=38.87 Aligned_cols=56 Identities=14% Similarity=0.127 Sum_probs=40.0
Q ss_pred eeeEEEecCCceeeeeCCCc-eEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCC-EEEEE
Q 031109 94 WRILRWGCPPSKFPWTYSDK-ETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGM-SCTWD 153 (165)
Q Consensus 94 ~~~GiWe~~pg~f~w~y~~d-E~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~-~~tW~ 153 (165)
+.+-.|.... .....-+.- .++.+++| ++|..++ +...+++||.|++|++. ..+.+
T Consensus 230 F~v~~~~~~~-~~~~~~~~~~~il~v~~G-~~i~~~~--~~~~l~~G~~~~ipa~~~~~~i~ 287 (300)
T 1zx5_A 230 FGLEVVDVTG-TAEIKTGGVMNILYAAEG-YFILRGK--ETADLHRGYSCLVPASTDSFTVE 287 (300)
T ss_dssp EEEEEEEEEE-EEEEECCSBCEEEEEEES-CEEEESS--SEEEECTTCEEEECTTCCEEEEE
T ss_pred EEEEEEEECC-ceEEecCCceEEEEEccc-EEEEeCC--eEEEEccceEEEEeCCCceEEEE
Confidence 6666666543 322222455 78899999 9999844 36899999999999987 45554
No 127
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=93.36 E-value=0.63 Score=39.39 Aligned_cols=52 Identities=15% Similarity=0.341 Sum_probs=38.3
Q ss_pred eeeEEEecCCceeeee-CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCC
Q 031109 94 WRILRWGCPPSKFPWT-YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGM 148 (165)
Q Consensus 94 ~~~GiWe~~pg~f~w~-y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~ 148 (165)
+.+-.|..... .... .+.-.++.+++|+++|..+ + +...+++||.|++|++.
T Consensus 251 F~~~~~~~~~~-~~~~~~~~~~il~v~~G~~~l~~~-~-~~~~l~~G~~~~vpa~~ 303 (319)
T 1qwr_A 251 FSVYKWDINGE-AEMAQDESFLICSVIEGSGLLKYE-D-KTCPLKKGDHFILPAQM 303 (319)
T ss_dssp CEEEEEEEEEE-EEECCCSSCEEEEEEEEEEEEEET-T-EEEEEETTCEEEECTTC
T ss_pred EEEEEEEECCc-eEEccCCccEEEEEEcCeEEEEEC-C-EEEEEcCCcEEEEeCCC
Confidence 56666665432 2222 2446789999999999884 5 47899999999999987
No 128
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=91.65 E-value=0.79 Score=35.74 Aligned_cols=76 Identities=16% Similarity=0.156 Sum_probs=49.3
Q ss_pred CCCCeeecccccccccceeeEEEecCCcee-eee-CC-CceEEEEEEcEEEEEe---CCCc----eeEEEcCCcEEEEcC
Q 031109 77 GGQPRVLPSKKTHLEAIWRILRWGCPPSKF-PWT-YS-DKETCYLLEGKVKVYP---DGSN----EGVEIGAGDLVVFPK 146 (165)
Q Consensus 77 ~G~P~~~~~~~~~~~~~~~~GiWe~~pg~f-~w~-y~-~dE~~yVLEG~vtVt~---dgG~----e~v~i~AGDlv~fPk 146 (165)
++++.....+.....+.+++-+..-.||.. ++| .. ...+++||+|+.+.+. +++. ....+++||.+++|+
T Consensus 52 ~~~~~~YtR~ll~~~~~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~ 131 (171)
T 3eqe_A 52 EPDQYAYGRNAIYRNNELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTK 131 (171)
T ss_dssp CCSSSSSEEEEEEECSSCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECT
T ss_pred CCCCCcEEEEEEecCCCeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCC
Confidence 456665555544444456665555556653 344 33 4678889999999864 2331 257899999999999
Q ss_pred CCEEEE
Q 031109 147 GMSCTW 152 (165)
Q Consensus 147 G~~~tW 152 (165)
|.-..-
T Consensus 132 ~~iH~V 137 (171)
T 3eqe_A 132 GLIHKM 137 (171)
T ss_dssp TCEEEE
T ss_pred CCEEEE
Confidence 875543
No 129
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=90.74 E-value=2.2 Score=39.11 Aligned_cols=24 Identities=25% Similarity=0.270 Sum_probs=20.4
Q ss_pred eEEEcCCcEEEEcCCCEEEEEEce
Q 031109 133 GVEIGAGDLVVFPKGMSCTWDVSV 156 (165)
Q Consensus 133 ~v~i~AGDlv~fPkG~~~tW~V~e 156 (165)
...|++||++.+|+|...-|.-..
T Consensus 173 v~~vr~GDviaiPaG~~~w~yN~G 196 (531)
T 3fz3_A 173 TRRIREGDVVAIPAGVAYWSYNDG 196 (531)
T ss_dssp CEEEETTEEEEECTTCCEEEECCS
T ss_pred eecccCCcEEEECCCCeEEEEeCC
Confidence 467999999999999988777654
No 130
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=89.92 E-value=0.4 Score=36.12 Aligned_cols=43 Identities=16% Similarity=0.305 Sum_probs=33.1
Q ss_pred EecCCceeeeeC--CCceEEEEEEcEEEEEeCCCceeEEEcCCcEE
Q 031109 99 WGCPPSKFPWTY--SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLV 142 (165)
Q Consensus 99 We~~pg~f~w~y--~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv 142 (165)
-...|+..-+.- ..+.+++|++|.|.+..++| ....+++||.|
T Consensus 98 ~~~~~ge~I~~~g~~~~~ly~I~~G~v~v~~~~g-~~~~l~~G~~f 142 (202)
T 3bpz_A 98 EVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGN-KEMKLSDGSYF 142 (202)
T ss_dssp EEECTTCEEECTTSBCCEEEEEEECEEEEECTTS-CCEEEETTCEE
T ss_pred eEECCCCEEEECCCcCCeEEEEeccEEEEEECCC-eEEEEcCCCEe
Confidence 445666655442 35889999999999998887 46789999987
No 131
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=89.36 E-value=0.9 Score=37.58 Aligned_cols=44 Identities=18% Similarity=0.305 Sum_probs=36.8
Q ss_pred ceeeee-CCC-ceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCC
Q 031109 104 SKFPWT-YSD-KETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGM 148 (165)
Q Consensus 104 g~f~w~-y~~-dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~ 148 (165)
..|+.| ... +.+-|||+|+++-.+.-|+ ...|+|||+-.+.+|.
T Consensus 75 ~gf~~HPHrg~EtvTyvl~G~~~H~DS~Gn-~~~i~~GdvQ~MtAG~ 120 (256)
T 2vec_A 75 AAFQPRTYPKVDILNVILDGEAEYRDSEGN-HVQASAGEALLLSTQP 120 (256)
T ss_dssp CEEEEECCSSEEEEEEEEESEEEEEETTSC-EEEEETTEEEEECCCT
T ss_pred CccCCcCCCCcEEEEEEEeeEEEEEeCCCC-EEEECCCeEEEEECCC
Confidence 458887 334 4478999999999999885 8999999999999885
No 132
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=88.90 E-value=2.9 Score=35.12 Aligned_cols=65 Identities=14% Similarity=0.165 Sum_probs=48.8
Q ss_pred eEEEecCCce-eeeeCCCceEEEE-EEcEEEEEeCCCceeEEE-cC---------CcEEEEcCCCEEEEEEceeeEEEEE
Q 031109 96 ILRWGCPPSK-FPWTYSDKETCYL-LEGKVKVYPDGSNEGVEI-GA---------GDLVVFPKGMSCTWDVSVGVDKHYK 163 (165)
Q Consensus 96 ~GiWe~~pg~-f~w~y~~dE~~yV-LEG~vtVt~dgG~e~v~i-~A---------GDlv~fPkG~~~tW~V~e~vrK~Y~ 163 (165)
.+++.-.+|. +....+..|+|.| |.|.++|+.+|. ..+. +. .|.+.+|+|.+.+.....+ -++|+
T Consensus 31 f~~~~L~~Ge~~~~~~~~~E~~iv~l~G~~~V~~~g~--~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a~~~-~~~~v 107 (270)
T 2qjv_A 31 FDVWQLXAGESITLPSDERERCLVLVAGLASVXAADS--FFYRIGQRMSPFERIPAYSVYLPHHTEAXVTAETD-LELAV 107 (270)
T ss_dssp EEEEEECTTCEEEECCSSEEEEEEEEESCEEEEETTE--EEEEECCCSSGGGCSCCCEEEECSSCCEEEEESSS-EEEEE
T ss_pred EEEEEecCCCEEEecCCCcEEEEEEecceEEEEECCE--EEeccccccccccCCCCcEEEECCCCEEEEEecCC-ceEEE
Confidence 4568888877 4566677898876 689999999874 4544 32 4999999999888887776 45554
No 133
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=88.46 E-value=1.1 Score=37.08 Aligned_cols=57 Identities=11% Similarity=0.103 Sum_probs=39.5
Q ss_pred cCCce-eeeeCCC-ceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEceee
Q 031109 101 CPPSK-FPWTYSD-KETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVGV 158 (165)
Q Consensus 101 ~~pg~-f~w~y~~-dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~v 158 (165)
..++. +.+..+. .=+.||++|+++|..+++ ....+.+||++.|-.+-..+-+..+..
T Consensus 189 L~~g~~~~~~~~~~~~~l~v~~G~v~v~g~~~-~~~~l~~gd~~~l~~~~~l~l~a~~~a 247 (256)
T 2vec_A 189 LDKGESANFQLHGPRAYLQSIHGKFHALTHHE-EKAALTCGDGAFIRDEANITLVADSPL 247 (256)
T ss_dssp ECTTCEEEEECSSSEEEEEEEESCEEEEETTE-EEEEECTTCEEEEESCSEEEEEESSSE
T ss_pred ECCCCEEEEecCCCeEEEEEEECEEEECCccc-cceEECCCCEEEECCCCeEEEEeCCCC
Confidence 34443 4444332 257889999999976544 357899999999998877776655544
No 134
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=86.98 E-value=0.43 Score=33.23 Aligned_cols=39 Identities=10% Similarity=0.054 Sum_probs=29.8
Q ss_pred CceeeeeC--CCceEEEEEEcEEEEEeCCCceeEEEcCCcEE
Q 031109 103 PSKFPWTY--SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLV 142 (165)
Q Consensus 103 pg~f~w~y--~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv 142 (165)
++..-+.- ..+.+++|++|.|.+...+|. ...+++||.|
T Consensus 47 ~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~-~~~l~~G~~f 87 (134)
T 2d93_A 47 AGAIILEDGQELDSWYVILNGTVEISHPDGK-VENLFMGNSF 87 (134)
T ss_dssp SSCEEECTTCEECEEEECCBSCEEEECSSSC-EEEECTTCEE
T ss_pred CCCEEEeCCCCCCeEEEEEeCEEEEEcCCCc-EEEecCCCcc
Confidence 55554442 247789999999999987774 5889999976
No 135
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=86.80 E-value=0.9 Score=31.66 Aligned_cols=43 Identities=16% Similarity=0.173 Sum_probs=31.7
Q ss_pred ecCCceeeee--CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEE
Q 031109 100 GCPPSKFPWT--YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVV 143 (165)
Q Consensus 100 e~~pg~f~w~--y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~ 143 (165)
...++..-+. -..+.+++|++|.|.+..+|. ....+++||.|=
T Consensus 50 ~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~g~-~~~~~~~G~~fG 94 (139)
T 3ocp_A 50 EYGKDSCIIKEGDVGSLVYVMEDGKVEVTKEGV-KLCTMGPGKVFG 94 (139)
T ss_dssp EECSSCEEECTTSCCCEEEEEEECCEEEEETTE-EEEEECTTCEES
T ss_pred ecCCCCEEEeCCCcCCEEEEEEeCEEEEEECCE-EEEEeCCCCEec
Confidence 4455554443 246889999999999988765 567899999863
No 136
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=85.85 E-value=2.5 Score=34.48 Aligned_cols=47 Identities=21% Similarity=0.287 Sum_probs=38.7
Q ss_pred ceeeee--CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEE
Q 031109 104 SKFPWT--YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCT 151 (165)
Q Consensus 104 g~f~w~--y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~t 151 (165)
..|+.| -..+.+-|||+|++.-.+.-|+ ...|+|||+-.+-+|.-+.
T Consensus 52 ~gf~~HPHrg~EtvTyvl~G~~~H~DS~Gn-~~~i~~GdvQ~MtAG~GI~ 100 (242)
T 1tq5_A 52 QGFGTHPHKDMEILTYVLEGTVEHQDSMGN-KEQVPAGEFQIMSAGTGIR 100 (242)
T ss_dssp CEEEEEEECSCEEEEEEEESEEEEEESSSC-EEEEETTCEEEEECTTCEE
T ss_pred CcCCCcCCCCcEEEEEEEEeEEEEEeCCCC-cEEECCCcEEEEECCCCcE
Confidence 458876 3456699999999999999885 7999999999999995443
No 137
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=85.25 E-value=1.2 Score=33.11 Aligned_cols=44 Identities=9% Similarity=0.150 Sum_probs=32.3
Q ss_pred EecCCceeeeeC--CCceEEEEEEcEEEEEeCCCceeEEEcCCcEE
Q 031109 99 WGCPPSKFPWTY--SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLV 142 (165)
Q Consensus 99 We~~pg~f~w~y--~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv 142 (165)
-...|+..-+.- ..+.+++|++|.|.+...+|.....+++||.|
T Consensus 97 ~~~~~ge~I~~~G~~~~~ly~I~~G~v~~~~~~g~~~~~l~~G~~f 142 (198)
T 2ptm_A 97 EVFQPADYVIQEGTFGDRMFFIQQGIVDIIMSDGVIATSLSDGSYF 142 (198)
T ss_dssp EEECTTCEEECTTSCCSEEEEEEECCEEEECTTSCEEEEECTTCEE
T ss_pred eeeCCCCEEEECCCcCcEEEEEEeCEEEEEecCCeEEEEecCCCEe
Confidence 344566655442 45889999999999997666445679999986
No 138
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=85.10 E-value=1.2 Score=31.77 Aligned_cols=44 Identities=11% Similarity=0.139 Sum_probs=33.4
Q ss_pred EEecCCceeeee--CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEE
Q 031109 98 RWGCPPSKFPWT--YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLV 142 (165)
Q Consensus 98 iWe~~pg~f~w~--y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv 142 (165)
.-...++..-+. -..+.+++|++|.|.+..++. ....+++||.|
T Consensus 63 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~-~~~~~~~G~~f 108 (154)
T 3pna_A 63 PVSFIAGETVIQQGDEGDNFYVIDQGEMDVYVNNE-WATSVGEGGSF 108 (154)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEESCEEEEETTE-EEEEECTTCEE
T ss_pred EEEECCCCEEEeCCCCCCeEEEEEecEEEEEECCE-EEEEecCCCEe
Confidence 355566666554 246889999999999999665 56779999986
No 139
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=83.29 E-value=1.4 Score=33.20 Aligned_cols=42 Identities=14% Similarity=0.120 Sum_probs=31.6
Q ss_pred cCCceeeee--CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEE
Q 031109 101 CPPSKFPWT--YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVV 143 (165)
Q Consensus 101 ~~pg~f~w~--y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~ 143 (165)
..++..-+. -..+.+++|++|.|.+..++. +...+++||.|=
T Consensus 35 ~~~g~~i~~~G~~~~~~y~i~~G~v~v~~~~~-~~~~~~~g~~fG 78 (246)
T 3of1_A 35 VPKGATIIKQGDQGDYFYVVEKGTVDFYVNDN-KVNSSGPGSSFG 78 (246)
T ss_dssp ECTTCEEECTTCCCCEEEEEEECCEEEESTTS-CCEEECTTCEEC
T ss_pred ECCCCEEEecCCCCCEEEEEEeeEEEEEECCE-EEEecCCCCeee
Confidence 344444333 246889999999999998776 578899999873
No 140
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=82.87 E-value=1.8 Score=30.50 Aligned_cols=44 Identities=23% Similarity=0.477 Sum_probs=32.4
Q ss_pred ecCCceeeeeC--CCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEE
Q 031109 100 GCPPSKFPWTY--SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVF 144 (165)
Q Consensus 100 e~~pg~f~w~y--~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~f 144 (165)
...++..-+.- ..+.+++|++|.|.+..++. ....+++||.+--
T Consensus 54 ~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~-~~~~~~~G~~fG~ 99 (160)
T 4f8a_A 54 HCAPGDLIYHAGESVDSLCFVVSGSLEVIQDDE-VVAILGKGDVFGD 99 (160)
T ss_dssp EECTTCEEECTTSBCCEEEEEEESEEEEEETTE-EEEEEETTCEEEC
T ss_pred eeCCCCEEEeCCCCccEEEEEEeeEEEEEECCE-EEEEecCCCEeCc
Confidence 33455544442 46899999999999998665 4678999998864
No 141
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=82.76 E-value=4 Score=30.78 Aligned_cols=53 Identities=9% Similarity=-0.014 Sum_probs=38.6
Q ss_pred Ccee-eee--CCCceEEEEEEcEEEEEeCCCcee--EEEcCCc-EEEEcCCCEEEEEEc
Q 031109 103 PSKF-PWT--YSDKETCYLLEGKVKVYPDGSNEG--VEIGAGD-LVVFPKGMSCTWDVS 155 (165)
Q Consensus 103 pg~f-~w~--y~~dE~~yVLEG~vtVt~dgG~e~--v~i~AGD-lv~fPkG~~~tW~V~ 155 (165)
|+.. .|| -..+|+++++.|+++|..++|.+. +.+...+ .+.+|+|...+...-
T Consensus 44 ~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg~~~~~~~L~~~~~gL~IppgvWh~~~~~ 102 (141)
T 2pa7_A 44 GEEPRGFHAHKKLEQVLVCLNGSCRVILDDGNIIQEITLDSPAVGLYVGPAVWHEMHDF 102 (141)
T ss_dssp SSCCEEEEEESSCCEEEEEEESCEEEEEECSSCEEEEEECCTTEEEEECTTCEEEEECC
T ss_pred CCCEECcCcCCCceEEEEEEccEEEEEEECCcEEEEEEECCCCcEEEeCCCEEEEEEEc
Confidence 6653 254 567999999999999999888433 4455544 489999987776553
No 142
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=82.36 E-value=2.8 Score=34.13 Aligned_cols=40 Identities=10% Similarity=0.127 Sum_probs=31.1
Q ss_pred ceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEceee
Q 031109 113 KETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVGV 158 (165)
Q Consensus 113 dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~v 158 (165)
.=+.||++|+++| +| ..+.+||++.|..+-..+-+..+..
T Consensus 182 ~~~~~v~~G~v~v---~g---~~l~~gd~~~~~~~~~l~l~a~~~a 221 (242)
T 1tq5_A 182 RVWIQVVKGNVTI---NG---VKASTSDGLAIWDEQAISIHADSDS 221 (242)
T ss_dssp EEEEEEEESEEEE---TT---EEEETTCEEEEESCSCEEEEESSSE
T ss_pred EEEEEEccCcEEE---CC---EEeCCCCEEEECCCCeEEEEeCCCC
Confidence 4569999999998 34 4699999999998877766655444
No 143
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=81.34 E-value=8.6 Score=32.80 Aligned_cols=50 Identities=20% Similarity=0.556 Sum_probs=38.5
Q ss_pred EecCCceeeeeCCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCC-EEEEEE--ceee
Q 031109 99 WGCPPSKFPWTYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGM-SCTWDV--SVGV 158 (165)
Q Consensus 99 We~~pg~f~w~y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~-~~tW~V--~e~v 158 (165)
|...+|-|. -..| .|||+|++.+ |+ ..+.+|+-+++|||. ...|.| .+.+
T Consensus 102 ~~~P~Gi~~---ad~E-~fVL~G~i~~---G~---~~l~~h~Y~f~PaGV~~~~~kv~~~~g~ 154 (303)
T 2qdr_A 102 FEAPSGIFT---ADLE-IFVIKGAIQL---GE---WQLNKHSYSFIPAGVRIGSWKVLGGEEA 154 (303)
T ss_dssp CEECCBEES---SCEE-EEEEESEEEE---TT---EEECTTEEEEECTTCCBCCEEEETTSCE
T ss_pred CCCCCcccc---cceE-EEEEEeEEEe---CC---EEecCCceEEecCCCccCceeecCCCCc
Confidence 666666543 4456 8999999987 33 889999999999998 677888 4444
No 144
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=81.31 E-value=0.86 Score=34.88 Aligned_cols=57 Identities=12% Similarity=0.151 Sum_probs=39.1
Q ss_pred eeEEEecCCcee-eeeCCC-ceEEEEEEcEEEEEe--CC------------------------------------CceeE
Q 031109 95 RILRWGCPPSKF-PWTYSD-KETCYLLEGKVKVYP--DG------------------------------------SNEGV 134 (165)
Q Consensus 95 ~~GiWe~~pg~f-~w~y~~-dE~~yVLEG~vtVt~--dg------------------------------------G~e~v 134 (165)
.+-+|-..++.. +.|++. +=+...+.|+=+++. .+ . -.+
T Consensus 125 ~~~~wiG~~gs~t~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~-~~~ 203 (235)
T 4gjz_A 125 TINAWFGPQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPF-LSC 203 (235)
T ss_dssp EEEEEEECTTCEEEEECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCC-EEE
T ss_pred ceEEEEeCCCCCceeeeccccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCc-EEE
Confidence 456787777665 467764 556667788876653 10 1 146
Q ss_pred EEcCCcEEEEcCCCEEEE
Q 031109 135 EIGAGDLVVFPKGMSCTW 152 (165)
Q Consensus 135 ~i~AGDlv~fPkG~~~tW 152 (165)
+++|||+++||+||-..=
T Consensus 204 ~l~pGD~LyiP~gW~H~V 221 (235)
T 4gjz_A 204 ILSPGEILFIPVKYWHYV 221 (235)
T ss_dssp EECTTCEEEECTTCEEEE
T ss_pred EECCCCEEEeCCCCcEEE
Confidence 899999999999996543
No 145
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=80.95 E-value=8.9 Score=30.74 Aligned_cols=81 Identities=10% Similarity=0.135 Sum_probs=50.7
Q ss_pred ccCCCCcccCCCCeeeccc-ccccccc-eeeEEEecCCcee--eeeCCCceEEEEEEcEEEEEe----CCCc-----eeE
Q 031109 68 RQWPKHCHTGGQPRVLPSK-KTHLEAI-WRILRWGCPPSKF--PWTYSDKETCYLLEGKVKVYP----DGSN-----EGV 134 (165)
Q Consensus 68 ~~Wp~~~~~~G~P~~~~~~-~~~~~~~-~~~GiWe~~pg~f--~w~y~~dE~~yVLEG~vtVt~----dgG~-----e~v 134 (165)
..|-......++|.....+ .+.++++ +++-+-.-.||+. .++....-++.||+|+.+.+. ++|. +..
T Consensus 45 ~~wl~~~~~~p~~~~y~r~lL~~dp~~~f~v~~l~W~PGq~spiHDH~swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~ 124 (211)
T 3uss_A 45 DDWLPEDCARPDPQRYQQYLLHVDSRQRFSVVSFVWGPGQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARR 124 (211)
T ss_dssp CCCCCGGGGCCCSSSCEEEEEEECTTSSCEEEEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCE
T ss_pred ccccchhhcCCCCCceeEEEEecCCCCCEEEEEEEECCCCcCCCCCCCeeEEEEeeeceEEEEEeeeCCCCCcccccceE
Confidence 3454344444555443333 4556655 6665444455553 343557899999999998854 4441 248
Q ss_pred EEcCCcEEEEcCCC
Q 031109 135 EIGAGDLVVFPKGM 148 (165)
Q Consensus 135 ~i~AGDlv~fPkG~ 148 (165)
.+.+||.+.|+.+.
T Consensus 125 ~l~~G~v~~~~p~~ 138 (211)
T 3uss_A 125 RLEPGEVEALSPRI 138 (211)
T ss_dssp EECTTCEEEEBTTT
T ss_pred EecCCCEEEECCCC
Confidence 89999999998773
No 146
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=80.59 E-value=15 Score=29.35 Aligned_cols=66 Identities=15% Similarity=0.153 Sum_probs=43.4
Q ss_pred Ceeecccccccccc-eeeEEEecCCce-eeeeC-CCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEE
Q 031109 80 PRVLPSKKTHLEAI-WRILRWGCPPSK-FPWTY-SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDV 154 (165)
Q Consensus 80 P~~~~~~~~~~~~~-~~~GiWe~~pg~-f~w~y-~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V 154 (165)
|.......|.+... ...=-| .|+. |+-+. ...|+ +||+|++. + ++ .++.+||-+..|.|...+...
T Consensus 133 ~Gv~~~~L~~~~~E~v~l~r~--~~G~~~~~~~hgG~Ei-lVL~G~~~--d-~~---~~~~~GsWlR~P~gs~h~~~a 201 (223)
T 3o14_A 133 EGISTSLLHEDERETVTHRKL--EPGANLTSEAAGGIEV-LVLDGDVT--V-ND---EVLGRNAWLRLPEGEALSATA 201 (223)
T ss_dssp TTEEEEEEEECSSCEEEEEEE--CTTCEEEECCSSCEEE-EEEEEEEE--E-TT---EEECTTEEEEECTTCCEEEEE
T ss_pred CCeEEEEEecCCCcEEEEEEE--CCCCccCCCCCCcEEE-EEEEeEEE--E-CC---ceECCCeEEEeCCCCccCcEE
Confidence 33444445555533 333344 4554 55443 56775 99999975 2 32 589999999999999999888
No 147
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=80.09 E-value=2.2 Score=32.07 Aligned_cols=43 Identities=23% Similarity=0.420 Sum_probs=33.0
Q ss_pred ecCCceeeeeC--CCceEEEEEEcEEEEEeCCCceeEEEcCCcEEE
Q 031109 100 GCPPSKFPWTY--SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVV 143 (165)
Q Consensus 100 e~~pg~f~w~y--~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~ 143 (165)
...|+..-+.- ..+.+++|++|.|.+..+|. ....+++||.|=
T Consensus 102 ~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~-~~~~l~~G~~fG 146 (212)
T 3ukn_A 102 FCAPGEFLIRQGDALQAIYFVCSGSMEVLKDNT-VLAILGKGDLIG 146 (212)
T ss_dssp EECTTCEEECTTSBCCEEEEEEECCEEEESSSC-EEEEECTTCEEE
T ss_pred EeCCCCEEEECCCcccEEEEEEecEEEEEECCe-EEEEecCCCCcC
Confidence 44566655442 35899999999999998765 567899999885
No 148
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=77.66 E-value=4.3 Score=31.89 Aligned_cols=56 Identities=18% Similarity=0.315 Sum_probs=36.7
Q ss_pred eeEEEecCCcee-eee-CCCceEEEEEEcEE-EEEe--CCCceeEE------EcCCcE--EEEcCCCEEE
Q 031109 95 RILRWGCPPSKF-PWT-YSDKETCYLLEGKV-KVYP--DGSNEGVE------IGAGDL--VVFPKGMSCT 151 (165)
Q Consensus 95 ~~GiWe~~pg~f-~w~-y~~dE~~yVLEG~v-tVt~--dgG~e~v~------i~AGDl--v~fPkG~~~t 151 (165)
++=.+--+++.+ .|| .+.||+-|+..|.- ++.. ++| ...+ +.+|+. +++|+|..-.
T Consensus 50 T~IYfLL~~g~~S~~HRv~sdEiW~~~~G~pL~l~l~~~dg-~~~~~~LG~dv~~Ge~pQ~vVP~G~wqa 118 (170)
T 1yud_A 50 SSIYFLLRTGEVSHFHRLTADEMWYFHAGQSLTIYMISPEG-ELTTAQLGLDLAAGERPQFLVPKGCIFG 118 (170)
T ss_dssp EEEEEEEETTCCEEEEECSSCEEEEEEEESCEEEEEECTTS-CEEEEEESSCTTTTEESCEEECTTCEEE
T ss_pred eEEEEEECCCCCCeeEEcCCCEEEEEEcCCCEEEEEEcCCC-CEEEEEeCCCcccCceeEEEECCCCEEE
Confidence 333444455553 365 57899999999974 5433 445 2444 567999 9999996443
No 149
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=75.90 E-value=13 Score=29.30 Aligned_cols=77 Identities=8% Similarity=-0.014 Sum_probs=46.0
Q ss_pred cCCCCcccCCCCeeecccccccccc-eeeEEEecCCcee-eee-CC-CceEEEEEEcEEEEEe----CCC------ceeE
Q 031109 69 QWPKHCHTGGQPRVLPSKKTHLEAI-WRILRWGCPPSKF-PWT-YS-DKETCYLLEGKVKVYP----DGS------NEGV 134 (165)
Q Consensus 69 ~Wp~~~~~~G~P~~~~~~~~~~~~~-~~~GiWe~~pg~f-~w~-y~-~dE~~yVLEG~vtVt~----dgG------~e~v 134 (165)
.|.. ....+|.....+...+.++ +++-+-.-.||.. ++| .. ...+++||+|+.+.+. +++ ....
T Consensus 46 ~W~~--~~~~d~~~y~R~ll~~~~~~~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~ 123 (200)
T 3eln_A 46 EWAL--YAKFDQYRYTRNLVDQGNGKFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSER 123 (200)
T ss_dssp HHGG--GCCCCSSSCEEEEEECGGGTCEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEE
T ss_pred HHHh--hhccCccceEEEeeecCCCceEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceE
Confidence 4643 3446666433323223333 6665444455553 344 44 5799999999999874 232 1257
Q ss_pred EEcCCcEEEE-cCC
Q 031109 135 EIGAGDLVVF-PKG 147 (165)
Q Consensus 135 ~i~AGDlv~f-PkG 147 (165)
.+++||...| |++
T Consensus 124 ~l~~G~v~~~~~~~ 137 (200)
T 3eln_A 124 TLRENQCAYINDSI 137 (200)
T ss_dssp EECTTCEEEECTTT
T ss_pred EeCCCCEEEecCCC
Confidence 8999999999 543
No 150
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=75.73 E-value=3 Score=32.57 Aligned_cols=42 Identities=12% Similarity=0.182 Sum_probs=31.6
Q ss_pred ecCCceeeeeC--CCceEEEEEEcEEEEEeCCCceeEEEcCCcEE
Q 031109 100 GCPPSKFPWTY--SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLV 142 (165)
Q Consensus 100 e~~pg~f~w~y--~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv 142 (165)
.-.++..-+.- ..+.+++|++|.|.+..+|. ....+++||.|
T Consensus 66 ~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~g~-~~~~l~~G~~f 109 (291)
T 2qcs_B 66 SFIAGETVIQQGDEGDNFYVIDQGEMDVYVNNE-WATSVGEGGSF 109 (291)
T ss_dssp EECTTCEEECTTSBCCEEEEEEECCEEEEETTE-EEEEECTTCEE
T ss_pred EECCCCEEEeCCCCCceEEEEeeeEEEEEECCe-EEEEcCCCCcc
Confidence 34555554442 35889999999999999664 57789999987
No 151
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=75.20 E-value=2 Score=34.40 Aligned_cols=37 Identities=11% Similarity=0.053 Sum_probs=30.9
Q ss_pred CCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCC
Q 031109 111 SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGM 148 (165)
Q Consensus 111 ~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~ 148 (165)
...-++|+|+|+++|+.+++ +...+.+||++.+-...
T Consensus 139 ~~~~~v~~l~G~~~v~~~~~-~~~~L~~~d~l~~~~~~ 175 (200)
T 1yll_A 139 ASTLLLFAQQDGVAISLQGQ-PRGQLAAHDCLCAEGLQ 175 (200)
T ss_dssp CSEEEEEESSSCEEEEETTE-EEEEECTTCEEEEESCC
T ss_pred CCEEEEEEccCcEEEEcCCC-ceeecCCCCEEEEeCCC
Confidence 34578999999999988766 58999999999996654
No 152
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=74.99 E-value=3.9 Score=27.97 Aligned_cols=44 Identities=18% Similarity=0.320 Sum_probs=27.6
Q ss_pred ecCCceeeeeC--CCceEEEEEEcEEEEEe--CCCce-----eEEEcCCcEEE
Q 031109 100 GCPPSKFPWTY--SDKETCYLLEGKVKVYP--DGSNE-----GVEIGAGDLVV 143 (165)
Q Consensus 100 e~~pg~f~w~y--~~dE~~yVLEG~vtVt~--dgG~e-----~v~i~AGDlv~ 143 (165)
...++..-+.- ..+.+++|++|.|.+.. ++|.+ ...+++||.|=
T Consensus 33 ~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 33 SFPTGSVIFKENSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp EECTTCEEECTTSBCCEEEEEEESCEEEECC---------CEEEEECTTCEEC
T ss_pred ecCCCCEEEeCCCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEec
Confidence 34555554442 35889999999999974 33422 23589999874
No 153
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=74.42 E-value=5 Score=30.10 Aligned_cols=41 Identities=15% Similarity=0.104 Sum_probs=30.5
Q ss_pred CCceeeee--CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEE
Q 031109 102 PPSKFPWT--YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLV 142 (165)
Q Consensus 102 ~pg~f~w~--y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv 142 (165)
.++..-+. -..+.+.+|++|+|.+...+.+....+++||.|
T Consensus 154 ~~g~~i~~~g~~~~~~y~I~~G~v~v~~~~~~~~~~l~~g~~f 196 (246)
T 3of1_A 154 QPGETIIREGDQGENFYLIEYGAVDVSKKGQGVINKLKDHDYF 196 (246)
T ss_dssp CTTCEEECTTSBCCEEEEEEECEEEEEETTTEEEEEEETTCEE
T ss_pred CCCCEEEeCCCcCCEEEEEEecEEEEEEcCCceEEEcCCCCcc
Confidence 45554443 235889999999999998876346779999977
No 154
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=74.40 E-value=3.2 Score=32.69 Aligned_cols=41 Identities=17% Similarity=0.192 Sum_probs=30.4
Q ss_pred CCceeeee--CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEE
Q 031109 102 PPSKFPWT--YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVV 143 (165)
Q Consensus 102 ~pg~f~w~--y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~ 143 (165)
.++..-+. -..+.+++|++|.|.+..+|. ....+.+||.|=
T Consensus 68 ~~g~~i~~~G~~~~~~yiI~~G~v~v~~~g~-~~~~~~~G~~fG 110 (299)
T 3shr_A 68 GKDSCIIKEGDVGSLVYVMEDGKVEVTKEGV-KLCTMGPGKVFG 110 (299)
T ss_dssp CTTCEEECTTCBCCCEEEEEESCEEEEETTE-EEEEECTTCEES
T ss_pred CCCCEEEcCCCcCceEEEEEEEEEEEEECCE-EEEEeCCCCeee
Confidence 44444333 235889999999999988775 578899999863
No 155
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=74.38 E-value=24 Score=27.40 Aligned_cols=56 Identities=14% Similarity=0.189 Sum_probs=41.4
Q ss_pred CCceee-ee--CCCceEEEEEEcEEEEEeCCCc---------eeEEEc---CCcEEEEcCCCEEEEEEcee
Q 031109 102 PPSKFP-WT--YSDKETCYLLEGKVKVYPDGSN---------EGVEIG---AGDLVVFPKGMSCTWDVSVG 157 (165)
Q Consensus 102 ~pg~f~-w~--y~~dE~~yVLEG~vtVt~dgG~---------e~v~i~---AGDlv~fPkG~~~tW~V~e~ 157 (165)
.+|..+ +| ....++++++.|++.+...|.. ..+++. ..-.+.+|+|+.....+.+.
T Consensus 61 ~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd 131 (174)
T 3ejk_A 61 LPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGD 131 (174)
T ss_dssp CBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTT
T ss_pred CCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccC
Confidence 445543 44 4589999999999999875531 256677 55799999999988887643
No 156
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=74.28 E-value=11 Score=31.20 Aligned_cols=43 Identities=19% Similarity=0.234 Sum_probs=30.9
Q ss_pred CCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcC-C----CEEEEEEcee
Q 031109 111 SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPK-G----MSCTWDVSVG 157 (165)
Q Consensus 111 ~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPk-G----~~~tW~V~e~ 157 (165)
...=+.||++|+++| ++. ...+.+||+++|.. | -..+-...+.
T Consensus 187 ~~~~~lyv~~G~v~v--~g~--~~~l~~~d~~~~~~~~~~~~~~l~l~a~~~ 234 (277)
T 2p17_A 187 HYNGFLYILEGSGVF--GAD--NIEGKAGQALFFSRHNRGEETELNVTAREK 234 (277)
T ss_dssp TCEEEEEEEESEEEE--TTT--TEEEETTEEEEECCCCTTCEEEEEEEESSS
T ss_pred CCEEEEEEEeCeEEE--CCC--ceEeCCCcEEEEcCCCCCccceEEEEeCCC
Confidence 346789999999988 221 35799999999986 7 5555554443
No 157
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=74.24 E-value=10 Score=33.47 Aligned_cols=59 Identities=24% Similarity=0.303 Sum_probs=40.7
Q ss_pred eEEEecCCce--eeeeCCC-ceEEEEEEcEEEEEe--CC---------------C--ceeEEEcCCcEEEEcCCCEEEEE
Q 031109 96 ILRWGCPPSK--FPWTYSD-KETCYLLEGKVKVYP--DG---------------S--NEGVEIGAGDLVVFPKGMSCTWD 153 (165)
Q Consensus 96 ~GiWe~~pg~--f~w~y~~-dE~~yVLEG~vtVt~--dg---------------G--~e~v~i~AGDlv~fPkG~~~tW~ 153 (165)
+-+|-..++. |+.|||. +=|..-++|+=+.+. .. + ....++.|||++++|+||-..=+
T Consensus 141 ~n~y~~~~g~~g~~~H~D~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~ 220 (442)
T 2xdv_A 141 SNVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQAD 220 (442)
T ss_dssp EEEEEECTTCBCSCSEECSSEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEE
T ss_pred cceEECCCCCCCccceECCcceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEE
Confidence 4568887775 5678874 556667788876662 11 0 12578999999999999966544
Q ss_pred E
Q 031109 154 V 154 (165)
Q Consensus 154 V 154 (165)
.
T Consensus 221 s 221 (442)
T 2xdv_A 221 T 221 (442)
T ss_dssp C
T ss_pred e
Confidence 3
No 158
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=72.53 E-value=4.2 Score=27.83 Aligned_cols=41 Identities=22% Similarity=0.390 Sum_probs=30.1
Q ss_pred EecCCceeeeeC--CCceEEEEEEcEEEEEeCCCceeEEEcCCcEE
Q 031109 99 WGCPPSKFPWTY--SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLV 142 (165)
Q Consensus 99 We~~pg~f~w~y--~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv 142 (165)
-...++..-+.- ..+.+++|++|.|.+...+ ...+++||.+
T Consensus 37 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~---~~~~~~G~~~ 79 (138)
T 1vp6_A 37 RTVPAGAVICRIGEPGDRMFFVVEGSVSVATPN---PVELGPGAFF 79 (138)
T ss_dssp EEECTTCEEECTTSCCCEEEEEEESCEEECSSS---CEEECTTCEE
T ss_pred EEeCCCCEEEeCCCCcceEEEEEeeEEEEEeCC---cceECCCCEe
Confidence 444556655442 3578999999999998765 3689999986
No 159
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=71.11 E-value=11 Score=33.74 Aligned_cols=54 Identities=11% Similarity=0.092 Sum_probs=36.8
Q ss_pred EEecCCcee-eeeCCCce---EEEEEEcEEEEEe-----------------------------CCCceeEEEcCCcEEEE
Q 031109 98 RWGCPPSKF-PWTYSDKE---TCYLLEGKVKVYP-----------------------------DGSNEGVEIGAGDLVVF 144 (165)
Q Consensus 98 iWe~~pg~f-~w~y~~dE---~~yVLEG~vtVt~-----------------------------dgG~e~v~i~AGDlv~f 144 (165)
+|-..++.+ ++|++... +..++.|+=++.. +.+ -.+++.|||++++
T Consensus 200 ~~mGp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~-~~v~l~pGE~LfI 278 (451)
T 2yu1_A 200 CLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDC-QRIELKQGYTFVI 278 (451)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCC-EEEEECTTCEEEE
T ss_pred EEEccCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccc-eEEEECCCcEEEe
Confidence 466666665 47776544 5677888765541 223 3688999999999
Q ss_pred cCCCEEEE
Q 031109 145 PKGMSCTW 152 (165)
Q Consensus 145 PkG~~~tW 152 (165)
|.||-..=
T Consensus 279 PsGWwH~V 286 (451)
T 2yu1_A 279 PSGWIHAV 286 (451)
T ss_dssp CTTCEEEE
T ss_pred CCCceEEE
Confidence 99995543
No 160
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=70.70 E-value=2.6 Score=30.00 Aligned_cols=22 Identities=18% Similarity=0.554 Sum_probs=17.5
Q ss_pred EEEcCCcEEEEcCCCEEEEEEc
Q 031109 134 VEIGAGDLVVFPKGMSCTWDVS 155 (165)
Q Consensus 134 v~i~AGDlv~fPkG~~~tW~V~ 155 (165)
-+++.||++++|+|+...=.-.
T Consensus 8 ~~l~~G~v~vVPq~~~v~~~A~ 29 (93)
T 1dgw_Y 8 ATLSEGDIIVIPSSFPVALKAA 29 (93)
T ss_dssp EEECTTCEEEECTTCCEEEEES
T ss_pred ceecCCcEEEECCCCceeEEec
Confidence 4689999999999997654433
No 161
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=70.49 E-value=3.8 Score=27.99 Aligned_cols=21 Identities=14% Similarity=0.074 Sum_probs=17.2
Q ss_pred eeeCCCceEEEEEEcEEEEEe
Q 031109 107 PWTYSDKETCYLLEGKVKVYP 127 (165)
Q Consensus 107 ~w~y~~dE~~yVLEG~vtVt~ 127 (165)
.||-...|+.||+||++.|..
T Consensus 52 H~hprA~ei~~V~~G~~~v~~ 72 (79)
T 1dgw_X 52 HYNSRATVILVANEGRAEVEL 72 (79)
T ss_dssp EEESSCEEEEEEEESCEEEEE
T ss_pred ccCCCCcEEEEEEeceEEEEE
Confidence 366779999999999887754
No 162
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=70.28 E-value=23 Score=26.54 Aligned_cols=43 Identities=23% Similarity=0.285 Sum_probs=33.6
Q ss_pred CceEEEEEEcEEEEEe--CCCc----eeEEEcCCcEEEEcCCCEEEEEE
Q 031109 112 DKETCYLLEGKVKVYP--DGSN----EGVEIGAGDLVVFPKGMSCTWDV 154 (165)
Q Consensus 112 ~dE~~yVLEG~vtVt~--dgG~----e~v~i~AGDlv~fPkG~~~tW~V 154 (165)
.-+...||+|++++.. ++|+ +.+.+.+|+.++||.+....-+.
T Consensus 39 twg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~ 87 (127)
T 3bb6_A 39 VYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEA 87 (127)
T ss_dssp EEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEE
T ss_pred EEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEE
Confidence 3588999999998873 4342 45678999999999998777765
No 163
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=69.49 E-value=7.5 Score=28.46 Aligned_cols=42 Identities=14% Similarity=0.169 Sum_probs=27.8
Q ss_pred CCceeeeeC--CCceEEEEEEcEEEEEe--CCCce--eEEEcCCcEEE
Q 031109 102 PPSKFPWTY--SDKETCYLLEGKVKVYP--DGSNE--GVEIGAGDLVV 143 (165)
Q Consensus 102 ~pg~f~w~y--~~dE~~yVLEG~vtVt~--dgG~e--~v~i~AGDlv~ 143 (165)
.++..-+.- ..+.+++|++|.|.+.- ++|.+ ...+++||.|-
T Consensus 19 ~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 66 (207)
T 2oz6_A 19 TAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFG 66 (207)
T ss_dssp CTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEES
T ss_pred CCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcc
Confidence 445544432 35789999999999873 44533 23578999874
No 164
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=68.61 E-value=2.5 Score=29.04 Aligned_cols=42 Identities=14% Similarity=0.285 Sum_probs=27.3
Q ss_pred cCCceeeeeC--CCceEEEEEEcEEEEEe-CCCce--eE--EEcCCcEE
Q 031109 101 CPPSKFPWTY--SDKETCYLLEGKVKVYP-DGSNE--GV--EIGAGDLV 142 (165)
Q Consensus 101 ~~pg~f~w~y--~~dE~~yVLEG~vtVt~-dgG~e--~v--~i~AGDlv 142 (165)
..++..-+.- ..+.+++|++|.|.+.. ++|.+ .. .+++||.|
T Consensus 34 ~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 34 FTEKSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp BCTTEEEECTTSBCSEEEEEEECCCEEECCSSCSSSSSCEEECCTTCBS
T ss_pred eCCCCEEEeCCCCCCeEEEEEeeEEEEEEcCCCcceeeeeeeecCCCEe
Confidence 3445544332 34789999999999874 34422 12 78999976
No 165
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=68.30 E-value=9.3 Score=28.45 Aligned_cols=47 Identities=19% Similarity=0.244 Sum_probs=30.2
Q ss_pred cCCceeeee--CCCceEEEEEEcEEEEE-eCCCcee--EEEcCCcEEEEcCC
Q 031109 101 CPPSKFPWT--YSDKETCYLLEGKVKVY-PDGSNEG--VEIGAGDLVVFPKG 147 (165)
Q Consensus 101 ~~pg~f~w~--y~~dE~~yVLEG~vtVt-~dgG~e~--v~i~AGDlv~fPkG 147 (165)
..++..-+. -+.+.+++|++|.|.+. .++|.+. ..+++||.|-.|..
T Consensus 32 ~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~~G~~~~ 83 (220)
T 2fmy_A 32 YSKKAILYTPNTERNLVFLVKSGRVRVYLAYEDKEFTLAILEAGDIFCTHTR 83 (220)
T ss_dssp ECTTCEEECTTCSSCEEEEEEESEEEEEEECSSCEEEEEEEETTCEEESCSS
T ss_pred eCCCCEEECCCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEeCCccc
Confidence 344554433 24578999999999984 3445332 35799998866433
No 166
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=67.47 E-value=9.4 Score=27.75 Aligned_cols=44 Identities=5% Similarity=-0.046 Sum_probs=29.2
Q ss_pred ecCCceeeee--CCCceEEEEEEcEEEEEe--CCCcee--EEEcCCcEEE
Q 031109 100 GCPPSKFPWT--YSDKETCYLLEGKVKVYP--DGSNEG--VEIGAGDLVV 143 (165)
Q Consensus 100 e~~pg~f~w~--y~~dE~~yVLEG~vtVt~--dgG~e~--v~i~AGDlv~ 143 (165)
...+|..-+. -+.+.+++|++|.|.+.. ++|.+. ..+++||.|-
T Consensus 34 ~~~~g~~l~~~G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~g 83 (194)
T 3dn7_A 34 KVRKKETLLKTGEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLS 83 (194)
T ss_dssp EECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEC
T ss_pred EEcCCCEEECCCCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEe
Confidence 3445554443 245889999999999874 455332 2378999885
No 167
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=67.10 E-value=7 Score=28.73 Aligned_cols=33 Identities=21% Similarity=0.149 Sum_probs=23.9
Q ss_pred CCceEEEEEEcEEEEEe--CCCce--eEEEcCCcEEE
Q 031109 111 SDKETCYLLEGKVKVYP--DGSNE--GVEIGAGDLVV 143 (165)
Q Consensus 111 ~~dE~~yVLEG~vtVt~--dgG~e--~v~i~AGDlv~ 143 (165)
+.+.+++|++|.|.+.. ++|.+ -..+++||.|=
T Consensus 16 ~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G 52 (195)
T 3b02_A 16 EARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFG 52 (195)
T ss_dssp BCCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred CCCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEec
Confidence 35789999999999864 44522 23588999873
No 168
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=66.54 E-value=9.8 Score=31.44 Aligned_cols=46 Identities=17% Similarity=0.379 Sum_probs=37.8
Q ss_pred ceeeee-CCCce-EEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEE
Q 031109 104 SKFPWT-YSDKE-TCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSC 150 (165)
Q Consensus 104 g~f~w~-y~~dE-~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~ 150 (165)
..|+.| ...-| +-|+|+|++.=.+.-|+ ...|+|||+=.+-+|.-+
T Consensus 50 ~gf~~HPHrg~EtVTyvl~G~~~H~DS~Gn-~~~i~~GdvQwMtAG~GI 97 (277)
T 2p17_A 50 GTFDVHPHRGIETVTYVISGELEHFDSKAG-HSTLGPGDVQWMTAGRGV 97 (277)
T ss_dssp TCCCCEEECSEEEEEEEEESCEEEEETTTE-EEEECTTCEEEEECTTCE
T ss_pred CCCCCCCCCCcEEEEEEEEeEEEEeeCCCC-ceEECCCeEEEEeCCCCE
Confidence 468876 44444 78999999999999895 799999999999999544
No 169
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=66.14 E-value=6.7 Score=27.10 Aligned_cols=44 Identities=16% Similarity=0.189 Sum_probs=28.4
Q ss_pred EecCCceeeeeC--CCceEEEEEEcEEEEEeC--CCce--eEEEcCCcEE
Q 031109 99 WGCPPSKFPWTY--SDKETCYLLEGKVKVYPD--GSNE--GVEIGAGDLV 142 (165)
Q Consensus 99 We~~pg~f~w~y--~~dE~~yVLEG~vtVt~d--gG~e--~v~i~AGDlv 142 (165)
-...++..-+.- ..+.+++|++|.|.+... +|.+ ...+++||.+
T Consensus 38 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 38 VNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTF 87 (154)
T ss_dssp EEECTTCEEECTTSBCCEEEEEEESCEEEECCCC-----CCEEECTTEEE
T ss_pred EEecCCCEEecCCCccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCee
Confidence 344555654442 358899999999999842 3422 3478999987
No 170
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=65.97 E-value=1.2 Score=32.10 Aligned_cols=19 Identities=26% Similarity=0.686 Sum_probs=15.6
Q ss_pred eEEEcCCcEEEEcCCCEEE
Q 031109 133 GVEIGAGDLVVFPKGMSCT 151 (165)
Q Consensus 133 ~v~i~AGDlv~fPkG~~~t 151 (165)
+..++.||.|+|++|+.++
T Consensus 56 p~~VkvGD~Vlf~k~y~Gt 74 (97)
T 1pcq_O 56 PLDVKVGDIVIFNDGYGVK 74 (97)
T ss_dssp ECSCCTTCEEEECCCSSCE
T ss_pred ecccCCCCEEEECCccCCe
Confidence 4569999999999976665
No 171
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=65.70 E-value=6.6 Score=33.37 Aligned_cols=43 Identities=14% Similarity=0.122 Sum_probs=35.5
Q ss_pred CCCceEEEE-EEcEEEEEeCCCceeEEEcCCcEEEEcCCCE-EEEEE
Q 031109 110 YSDKETCYL-LEGKVKVYPDGSNEGVEIGAGDLVVFPKGMS-CTWDV 154 (165)
Q Consensus 110 y~~dE~~yV-LEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~-~tW~V 154 (165)
.+..|+|.| |.|.++|+.+|. ..+++.-|.+.+|+|.+ .+...
T Consensus 76 l~~rE~~iV~lgG~~~V~vdg~--~f~lg~~dalYVp~G~~~v~~as 120 (289)
T 1ywk_A 76 LERRELGVINIGGPGFIEIDGA--KETMKKQDGYYIGKETKHVRFSS 120 (289)
T ss_dssp TTTEEEEEEECSSCEEEEETTE--EEEECTTCEEEECTTCCCEEEEE
T ss_pred CCCcEEEEEEccCeEEEEECCE--EEecCCCCEEEeCCCCeEEEEEe
Confidence 367898876 589999999874 57999999999999976 66665
No 172
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=64.97 E-value=9.7 Score=32.03 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=32.3
Q ss_pred ecCCceeeeeC--CCceEEEEEEcEEEEEeCCCceeEEEcCCcEE
Q 031109 100 GCPPSKFPWTY--SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLV 142 (165)
Q Consensus 100 e~~pg~f~w~y--~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv 142 (165)
.-.+|..-+.- ..+.+++|++|.|.+...+......+++||.|
T Consensus 365 ~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~~~~~~~~~l~~G~~f 409 (469)
T 1o7f_A 365 HAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDF 409 (469)
T ss_dssp ECSTTCEEECTTSCCCEEEEEEESEEEEEETTTEEEEEEETTCEE
T ss_pred EecCCCEEEeCCCcCCeEEEEEEeEEEEEEcCCeeEEEecCCCEE
Confidence 34666665542 45889999999999988765346779999976
No 173
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=64.28 E-value=6.7 Score=29.74 Aligned_cols=43 Identities=16% Similarity=0.228 Sum_probs=28.0
Q ss_pred ecCCceeeeeC--CCceEEEEEEcEEEEEe--CCCcee--EEEcCCcEE
Q 031109 100 GCPPSKFPWTY--SDKETCYLLEGKVKVYP--DGSNEG--VEIGAGDLV 142 (165)
Q Consensus 100 e~~pg~f~w~y--~~dE~~yVLEG~vtVt~--dgG~e~--v~i~AGDlv 142 (165)
.-.++..-+.- ..+.+++|++|.|.+.- ++|.+. ..+++||.|
T Consensus 47 ~~~~ge~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~f 95 (232)
T 1zyb_A 47 KHKAGETIIKSGNPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLI 95 (232)
T ss_dssp EECTTCEEECTTSBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEE
T ss_pred EECCCCEEECCCCcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCee
Confidence 34455544432 35789999999999863 344232 357899987
No 174
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=64.15 E-value=9 Score=32.19 Aligned_cols=40 Identities=18% Similarity=0.350 Sum_probs=28.4
Q ss_pred CCCceEEEEEEc----EEEEEeCCC------------------ceeEEEcCCcEEEEcCCCEE
Q 031109 110 YSDKETCYLLEG----KVKVYPDGS------------------NEGVEIGAGDLVVFPKGMSC 150 (165)
Q Consensus 110 y~~dE~~yVLEG----~vtVt~dgG------------------~e~v~i~AGDlv~fPkG~~~ 150 (165)
+...|..|+|+. ++.+-.++- + .+.+++||.+++|+|.-.
T Consensus 115 ~gKpE~~y~L~~~~~~~~~~G~~~~~~e~l~~~i~~~~~~~lLn-~v~l~pGd~~~ipaGt~H 176 (319)
T 1qwr_A 115 LGKTECWYIIDCKENAEIIYGHTARSKTELVTMINSGDWEGLLR-RIKIKPGDFYYVPSGTLH 176 (319)
T ss_dssp CCCCEEEEEEEECTTCEEEEEECCSSHHHHHHHHHTTCHHHHEE-EEECCTTCEEEECTTCCE
T ss_pred CCCCEEEEEccCCCchhheeCCCCCCHHHHHHHHHcCCHHHhce-EEEcCCCCEEEcCCCCce
Confidence 567999999985 233322211 2 688999999999999843
No 175
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=63.96 E-value=7.5 Score=32.91 Aligned_cols=44 Identities=23% Similarity=0.299 Sum_probs=36.2
Q ss_pred CCceEEEE-EEcEEEEEeCCCceeEEEcCCcEEEEcCCCE-EEEEEce
Q 031109 111 SDKETCYL-LEGKVKVYPDGSNEGVEIGAGDLVVFPKGMS-CTWDVSV 156 (165)
Q Consensus 111 ~~dE~~yV-LEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~-~tW~V~e 156 (165)
+..|+|.| |.|.++|+.+|. ..+++.-|.+.+|+|.+ .+.....
T Consensus 77 ~~rE~~iV~l~G~~~V~vdG~--~f~lg~~dalYVp~g~~~v~~as~d 122 (282)
T 1xru_A 77 ERRELGVINIGGAGTITVDGQ--CYEIGHRDALYVGKGAKEVVFASID 122 (282)
T ss_dssp TTEEEEEEECSSCEEEEETTE--EEEECTTCEEEECTTCCCEEEEESC
T ss_pred CCcEEEEEEccCeEEEEECCE--EEecCCCCEEEeCCCCeEEEEEecC
Confidence 57888876 589999999874 67999999999999996 7766553
No 176
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=63.94 E-value=11 Score=27.65 Aligned_cols=42 Identities=19% Similarity=0.302 Sum_probs=27.8
Q ss_pred CCceeeeeC--CCceEEEEEEcEEEEEe--CCCce--eEEEcCCcEEE
Q 031109 102 PPSKFPWTY--SDKETCYLLEGKVKVYP--DGSNE--GVEIGAGDLVV 143 (165)
Q Consensus 102 ~pg~f~w~y--~~dE~~yVLEG~vtVt~--dgG~e--~v~i~AGDlv~ 143 (165)
.++..-+.- +.+.+++|++|.|.+.- ++|.+ -..+++||.|-
T Consensus 25 ~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 72 (210)
T 3ryp_A 25 PSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 72 (210)
T ss_dssp CTTCEEECTTSBCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred CCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEee
Confidence 444443332 35789999999999973 44533 23479999884
No 177
>3esg_A HUTD, putative uncharacterized protein; beta barrel, unknown function; 1.80A {Pseudomonas fluorescens} SCOP: b.82.1.0
Probab=63.83 E-value=26 Score=27.91 Aligned_cols=49 Identities=10% Similarity=0.097 Sum_probs=40.9
Q ss_pred CCceEEEEEEcE-EEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEc-eeeEE
Q 031109 111 SDKETCYLLEGK-VKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVS-VGVDK 160 (165)
Q Consensus 111 ~~dE~~yVLEG~-vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~-e~vrK 160 (165)
..+=+..+|+|. ++++.++. ..+.+.++|.+.|+-++...=+.. .+++-
T Consensus 65 G~dR~l~lL~G~gl~L~~~g~-~~~~L~~~~p~~F~G~~~v~a~L~~G~v~D 115 (193)
T 3esg_A 65 GYQRVITVIQGAGMVLTVDGE-EQRGLLPLQPFAFRGDSQVSCRLITGPIRD 115 (193)
T ss_dssp TCEEEEEEEESSCEEEEETTS-CCEEECBTCCEEEETTSCEEEEESSSCEEE
T ss_pred CceEEEEEEcCCcEEEEeCCC-ccEecCCCCCEEeCCCCeEEEEECCCCEEE
Confidence 579999999997 99999876 578899999999999998877754 35543
No 178
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=63.69 E-value=10 Score=28.36 Aligned_cols=44 Identities=16% Similarity=0.277 Sum_probs=28.9
Q ss_pred ecCCceeeee--CCCceEEEEEEcEEEEE-eCCCce--eEEEcCCcEEE
Q 031109 100 GCPPSKFPWT--YSDKETCYLLEGKVKVY-PDGSNE--GVEIGAGDLVV 143 (165)
Q Consensus 100 e~~pg~f~w~--y~~dE~~yVLEG~vtVt-~dgG~e--~v~i~AGDlv~ 143 (165)
...++..-+. -+.+.+++|++|.|.+. .++|.+ ...+++||.|-
T Consensus 27 ~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~fG 75 (222)
T 1ft9_A 27 IHAKGSLVCTGEGDENGVFVVVDGRLRVYLVGEEREISLFYLTSGDMFC 75 (222)
T ss_dssp EECTTCEEECTTCCCCCEEEEEESEEEEEEEETTEEEEEEEEETTCEEE
T ss_pred EECCCCEEECCCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEec
Confidence 3344554443 24578999999999985 334523 23578999887
No 179
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=63.23 E-value=40 Score=24.91 Aligned_cols=46 Identities=22% Similarity=0.285 Sum_probs=34.1
Q ss_pred eEEEEEEcEEEEE--eCCCc----eeEEEcCCcEEEEcCCCEEEEEEceeeE
Q 031109 114 ETCYLLEGKVKVY--PDGSN----EGVEIGAGDLVVFPKGMSCTWDVSVGVD 159 (165)
Q Consensus 114 E~~yVLEG~vtVt--~dgG~----e~v~i~AGDlv~fPkG~~~tW~V~e~vr 159 (165)
.-..||+|++++. .++|. +.+.+.||+..++|......=+..++++
T Consensus 40 gkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sdD~~ 91 (119)
T 3dl3_A 40 GQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSDDAQ 91 (119)
T ss_dssp EEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECTTCE
T ss_pred EEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECCCeE
Confidence 3577999999999 33332 4578999999999998866665555544
No 180
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=62.92 E-value=10 Score=26.80 Aligned_cols=44 Identities=5% Similarity=-0.113 Sum_probs=28.7
Q ss_pred EecCCceeeee--CCCceEEEEEEcEEEEEe-CCCce--eEEEcCCcEE
Q 031109 99 WGCPPSKFPWT--YSDKETCYLLEGKVKVYP-DGSNE--GVEIGAGDLV 142 (165)
Q Consensus 99 We~~pg~f~w~--y~~dE~~yVLEG~vtVt~-dgG~e--~v~i~AGDlv 142 (165)
-...++..-+. -..+.+++|++|.|.+.. ++|.+ ...+++||.|
T Consensus 64 ~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~g~~~~~~~~~~G~~f 112 (161)
T 3idb_B 64 KLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSF 112 (161)
T ss_dssp EEECTTCEEECTTSCCCEEEEEEESEEEEEEEETTEEEEEEEEESCCEE
T ss_pred eEeCCCCEEEeCCCCCcEEEEEEeCEEEEEEcCCCCeEEEEEcCCCCEe
Confidence 34455565444 346889999999999974 23422 2348899966
No 181
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=61.91 E-value=14 Score=27.67 Aligned_cols=43 Identities=12% Similarity=0.127 Sum_probs=28.4
Q ss_pred cCCceeeee--CCCceEEEEEEcEEEEEe--CCCce--eEEEcCCcEEE
Q 031109 101 CPPSKFPWT--YSDKETCYLLEGKVKVYP--DGSNE--GVEIGAGDLVV 143 (165)
Q Consensus 101 ~~pg~f~w~--y~~dE~~yVLEG~vtVt~--dgG~e--~v~i~AGDlv~ 143 (165)
..++..-+. -+.+.+++|++|.|.+.. ++|.+ ...+++||.|-
T Consensus 39 ~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G 87 (237)
T 3fx3_A 39 YDRGETLFLQEEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFG 87 (237)
T ss_dssp ECTTCEEECTTSCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEEC
T ss_pred ECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEec
Confidence 344554443 245789999999999875 45532 23478999873
No 182
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=60.44 E-value=13 Score=27.31 Aligned_cols=43 Identities=12% Similarity=0.117 Sum_probs=28.4
Q ss_pred cCCceeeee--CCCceEEEEEEcEEEEEe--CCCcee--EEEcCCcEEE
Q 031109 101 CPPSKFPWT--YSDKETCYLLEGKVKVYP--DGSNEG--VEIGAGDLVV 143 (165)
Q Consensus 101 ~~pg~f~w~--y~~dE~~yVLEG~vtVt~--dgG~e~--v~i~AGDlv~ 143 (165)
..++..-+. -..+.+++|++|.|.+.- ++|.+. ..+++||.+.
T Consensus 31 ~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~ 79 (220)
T 3dv8_A 31 VKKGTIIHNGNMDCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCL 79 (220)
T ss_dssp ECTTCEEEEGGGCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred eCCCCEEECCCCCcceEEEEEeceEEEEEECCCCCEEEEEecCCCCeee
Confidence 344554433 245889999999999874 455322 4478999963
No 183
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=60.30 E-value=13 Score=27.62 Aligned_cols=43 Identities=19% Similarity=0.332 Sum_probs=28.3
Q ss_pred ecCCceeeeeC--CCceEEEEEEcEEEEEe--CCCcee--EEEcCCcEE
Q 031109 100 GCPPSKFPWTY--SDKETCYLLEGKVKVYP--DGSNEG--VEIGAGDLV 142 (165)
Q Consensus 100 e~~pg~f~w~y--~~dE~~yVLEG~vtVt~--dgG~e~--v~i~AGDlv 142 (165)
...++..-+.- +.+.+++|++|.|.+.. ++|.+. ..+++||.|
T Consensus 33 ~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 81 (227)
T 3d0s_A 33 DFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMF 81 (227)
T ss_dssp EECTTCEEECTTCCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEE
T ss_pred EeCCCCEEEcCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEE
Confidence 34455544432 35789999999999874 345222 358899987
No 184
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=60.28 E-value=12 Score=27.78 Aligned_cols=44 Identities=20% Similarity=0.317 Sum_probs=29.1
Q ss_pred ecCCceeeeeC--CCceEEEEEEcEEEEEe--CCCce--eEEEcCCcEEE
Q 031109 100 GCPPSKFPWTY--SDKETCYLLEGKVKVYP--DGSNE--GVEIGAGDLVV 143 (165)
Q Consensus 100 e~~pg~f~w~y--~~dE~~yVLEG~vtVt~--dgG~e--~v~i~AGDlv~ 143 (165)
...++..-+.- +.+.+++|++|.|.+.- ++|.+ ...+++||.|-
T Consensus 38 ~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 38 RYPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVG 87 (230)
T ss_dssp EECTTCEEECTTSBCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred EeCCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEE
Confidence 33455544432 35889999999999874 44533 23489999884
No 185
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=59.97 E-value=10 Score=25.90 Aligned_cols=43 Identities=19% Similarity=0.228 Sum_probs=28.2
Q ss_pred ecCCceeeeeC--CCceEEEEEEcEEEEEe--CCCce--eEEEcCCcEE
Q 031109 100 GCPPSKFPWTY--SDKETCYLLEGKVKVYP--DGSNE--GVEIGAGDLV 142 (165)
Q Consensus 100 e~~pg~f~w~y--~~dE~~yVLEG~vtVt~--dgG~e--~v~i~AGDlv 142 (165)
...++..-+.- ..+.+++|++|.|.+.. ++|.+ ...+++||.+
T Consensus 32 ~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~ 80 (149)
T 2pqq_A 32 TLARGDTLFHEGDPGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELI 80 (149)
T ss_dssp EECTTCEEECTTSEECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEE
T ss_pred EeCCCCEEECCCCCCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEe
Confidence 44555544432 34779999999999874 33422 2468899987
No 186
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=59.65 E-value=42 Score=30.31 Aligned_cols=60 Identities=23% Similarity=0.328 Sum_probs=39.9
Q ss_pred eEEEecCCce--eeeeCCC-ceEEEEEEcEEEEEe--CC-------------------C--ceeEEEcCCcEEEEcCCCE
Q 031109 96 ILRWGCPPSK--FPWTYSD-KETCYLLEGKVKVYP--DG-------------------S--NEGVEIGAGDLVVFPKGMS 149 (165)
Q Consensus 96 ~GiWe~~pg~--f~w~y~~-dE~~yVLEG~vtVt~--dg-------------------G--~e~v~i~AGDlv~fPkG~~ 149 (165)
+-.|-..++. |+.|||. |=|..=++|+=+... .. + ...++++|||+++||+|+-
T Consensus 166 ~N~Y~tp~Gs~g~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~ 245 (489)
T 4diq_A 166 SNVYLTPPNSQGFAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFI 245 (489)
T ss_dssp EEEEEECSSBCCSCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCE
T ss_pred ceEEecCCCcccccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCc
Confidence 3468888885 6788875 445555677655443 11 0 0148899999999999986
Q ss_pred EEEEEc
Q 031109 150 CTWDVS 155 (165)
Q Consensus 150 ~tW~V~ 155 (165)
..=...
T Consensus 246 H~~~s~ 251 (489)
T 4diq_A 246 HQAECQ 251 (489)
T ss_dssp EEEEBC
T ss_pred eEEEec
Confidence 655544
No 187
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=59.35 E-value=5.2 Score=33.66 Aligned_cols=59 Identities=15% Similarity=0.132 Sum_probs=37.9
Q ss_pred eeeEEEecCCce-eeeeCCCce-EEEEEEcEEEEE--eC----------------C---------------CceeEEEcC
Q 031109 94 WRILRWGCPPSK-FPWTYSDKE-TCYLLEGKVKVY--PD----------------G---------------SNEGVEIGA 138 (165)
Q Consensus 94 ~~~GiWe~~pg~-f~w~y~~dE-~~yVLEG~vtVt--~d----------------g---------------G~e~v~i~A 138 (165)
....+|-..++. ...|||..+ +...+.|+=++. +. + ..-.++++|
T Consensus 167 ~~s~l~~g~~g~~~~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~p 246 (338)
T 3al5_A 167 FSSVFRISSPGLQLWTHYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEA 246 (338)
T ss_dssp EEEEEEEECTTCEEEEECCSSEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECT
T ss_pred ccceeEECCCCCCccceECCcccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECC
Confidence 345678777765 445887544 444567875554 11 0 013578999
Q ss_pred CcEEEEcCCCEEEE
Q 031109 139 GDLVVFPKGMSCTW 152 (165)
Q Consensus 139 GDlv~fPkG~~~tW 152 (165)
||++++|.||-..=
T Consensus 247 GD~LyiP~gWwH~v 260 (338)
T 3al5_A 247 GDVLFIPALWFHNV 260 (338)
T ss_dssp TCEEEECTTCEEEE
T ss_pred CCEEEECCCCeEEE
Confidence 99999999985443
No 188
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=59.31 E-value=14 Score=28.64 Aligned_cols=45 Identities=18% Similarity=0.264 Sum_probs=30.1
Q ss_pred EecCCceeeeeC--CCceEEEEEEcEEEEEe--CCCce--eEEEcCCcEEE
Q 031109 99 WGCPPSKFPWTY--SDKETCYLLEGKVKVYP--DGSNE--GVEIGAGDLVV 143 (165)
Q Consensus 99 We~~pg~f~w~y--~~dE~~yVLEG~vtVt~--dgG~e--~v~i~AGDlv~ 143 (165)
-...++..-+.- ..+.+++|++|.|.+.- ++|.+ ...+++||.|-
T Consensus 72 ~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~G 122 (260)
T 3kcc_A 72 HKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 122 (260)
T ss_dssp EEECTTCEEECTTCBCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred EEECCCCEEECCCCcCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEe
Confidence 344555654442 35889999999999973 44533 23479999884
No 189
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=58.74 E-value=5.3 Score=33.83 Aligned_cols=57 Identities=12% Similarity=0.120 Sum_probs=38.2
Q ss_pred EEecCCcee-eeeCCC-ceEEEEEEcEEEEEe--CC------------------------------------CceeEEEc
Q 031109 98 RWGCPPSKF-PWTYSD-KETCYLLEGKVKVYP--DG------------------------------------SNEGVEIG 137 (165)
Q Consensus 98 iWe~~pg~f-~w~y~~-dE~~yVLEG~vtVt~--dg------------------------------------G~e~v~i~ 137 (165)
+|-..++.. ++|+|. +=+...|.|+=++.. .. ..-.++++
T Consensus 187 l~iG~~gs~t~~H~D~~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~ 266 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVG 266 (349)
T ss_dssp EEEECTTCEEEEECCSEEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEEC
T ss_pred EEEECCCCCccceECChhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEEC
Confidence 677777654 678875 555666788755541 10 11257899
Q ss_pred CCcEEEEcCCCEEEEEE
Q 031109 138 AGDLVVFPKGMSCTWDV 154 (165)
Q Consensus 138 AGDlv~fPkG~~~tW~V 154 (165)
|||+++||.||-..=..
T Consensus 267 pGD~LyiP~gWwH~V~~ 283 (349)
T 3d8c_A 267 PGDVLYIPMYWWHHIES 283 (349)
T ss_dssp TTCEEEECTTCEEEEEE
T ss_pred CCCEEEECCCCcEEEEE
Confidence 99999999999655443
No 190
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=58.36 E-value=15 Score=31.09 Aligned_cols=22 Identities=18% Similarity=0.403 Sum_probs=17.9
Q ss_pred eEEEcCCcEEEEcCCCEEEEEE
Q 031109 133 GVEIGAGDLVVFPKGMSCTWDV 154 (165)
Q Consensus 133 ~v~i~AGDlv~fPkG~~~tW~V 154 (165)
.++++|||++++|+||-..=..
T Consensus 219 ~~~L~pGD~LyiP~gwwH~v~s 240 (342)
T 1vrb_A 219 IVNLTPGTMLYLPRGLWHSTKS 240 (342)
T ss_dssp EEEECTTCEEEECTTCEEEEEC
T ss_pred EEEECCCcEEEeCCCccEEEEE
Confidence 5789999999999999654443
No 191
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=57.91 E-value=12 Score=27.50 Aligned_cols=31 Identities=19% Similarity=0.253 Sum_probs=22.6
Q ss_pred ceEEEEEEcEEEEEe--CCCcee--EEEcCCcEEE
Q 031109 113 KETCYLLEGKVKVYP--DGSNEG--VEIGAGDLVV 143 (165)
Q Consensus 113 dE~~yVLEG~vtVt~--dgG~e~--v~i~AGDlv~ 143 (165)
+.+++|++|.|.+.. ++|.+. ..+++||+|-
T Consensus 26 ~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 60 (202)
T 2zcw_A 26 DRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFG 60 (202)
T ss_dssp CCCEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred CeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEee
Confidence 678999999999864 445332 3488999874
No 192
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=57.80 E-value=12 Score=35.38 Aligned_cols=31 Identities=23% Similarity=0.239 Sum_probs=25.2
Q ss_pred CceEEEEEEcEEEEEeCCCceeEEEcCCcEE
Q 031109 112 DKETCYLLEGKVKVYPDGSNEGVEIGAGDLV 142 (165)
Q Consensus 112 ~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv 142 (165)
.+.+..|++|+|.|...+.....++++||.|
T Consensus 379 gds~YIIlsG~V~V~~~~~~~v~~L~~Gd~F 409 (999)
T 4f7z_A 379 GTSWYIILKGSVNVVIYGKGVVCTLHEGDDF 409 (999)
T ss_dssp CCEEEEEEESEEEEEETTTEEEEEEETTCEE
T ss_pred CCeEEEEEeeEEEEEEcCCcceEEecCCCcc
Confidence 4778889999999987654356789999987
No 193
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=56.31 E-value=17 Score=27.17 Aligned_cols=43 Identities=19% Similarity=0.284 Sum_probs=27.1
Q ss_pred ecCCceeeee--CCCceEEEEEEcEEEEEe--CCCce--eEEEcCCcEE
Q 031109 100 GCPPSKFPWT--YSDKETCYLLEGKVKVYP--DGSNE--GVEIGAGDLV 142 (165)
Q Consensus 100 e~~pg~f~w~--y~~dE~~yVLEG~vtVt~--dgG~e--~v~i~AGDlv 142 (165)
.-.++..-+. -+.+.+++|++|.|.+.- ++|.+ ...+++||.|
T Consensus 37 ~~~~g~~i~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 85 (232)
T 2gau_A 37 PCKKASTVFSEGDIPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFF 85 (232)
T ss_dssp EECTTCEEECTTCCCCEEEEEEESCEEEEC-----CCCEEEEECTTCEE
T ss_pred EECCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 3345554443 235778999999999974 23422 3468999987
No 194
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=56.22 E-value=51 Score=25.64 Aligned_cols=52 Identities=13% Similarity=0.231 Sum_probs=36.9
Q ss_pred eeee--CCCceEEEEEEcEE-EEEeCCC--------ceeEEEcC--CcEEEEcCCCEEEEEEcee
Q 031109 106 FPWT--YSDKETCYLLEGKV-KVYPDGS--------NEGVEIGA--GDLVVFPKGMSCTWDVSVG 157 (165)
Q Consensus 106 f~w~--y~~dE~~yVLEG~v-tVt~dgG--------~e~v~i~A--GDlv~fPkG~~~tW~V~e~ 157 (165)
+++| ....++++++.|++ .|..|.+ -..+++.+ +..+.+|+|+-....+.+.
T Consensus 63 lH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd 127 (185)
T 1ep0_A 63 LHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSD 127 (185)
T ss_dssp EEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSS
T ss_pred ceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCC
Confidence 3445 56799999999996 3444432 13466665 5889999999998887653
No 195
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=55.10 E-value=20 Score=27.74 Aligned_cols=43 Identities=19% Similarity=0.158 Sum_probs=28.3
Q ss_pred cCCceeeee--CCCceEEEEEEcEEEEEe--CCCc---eeEEEcCCcEEE
Q 031109 101 CPPSKFPWT--YSDKETCYLLEGKVKVYP--DGSN---EGVEIGAGDLVV 143 (165)
Q Consensus 101 ~~pg~f~w~--y~~dE~~yVLEG~vtVt~--dgG~---e~v~i~AGDlv~ 143 (165)
..++..-+. -..+.+++|++|+|.+.. ++|+ ....+++||.|=
T Consensus 185 ~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~fG 234 (291)
T 2qcs_B 185 FEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFG 234 (291)
T ss_dssp ECTTCEEECTTSCCCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEEC
T ss_pred ECCCCEEEeCCccCCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEec
Confidence 344554443 245889999999999973 2231 245699999873
No 196
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=54.83 E-value=16 Score=30.56 Aligned_cols=47 Identities=23% Similarity=0.246 Sum_probs=38.2
Q ss_pred ceeeee-CCCce-EEEEE-EcEEEEEeCCCceeEEEcCCcEEEEcCCCEEE
Q 031109 104 SKFPWT-YSDKE-TCYLL-EGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCT 151 (165)
Q Consensus 104 g~f~w~-y~~dE-~~yVL-EG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~t 151 (165)
..|+.| ...-| +-|+| +|++.=.+.-|+ ...|++||+=.+-+|.-+.
T Consensus 51 ~Gf~~HPHrg~EtVTyvl~~G~~~H~DS~Gn-~~~i~~GdvQwMtAG~GI~ 100 (290)
T 1j1l_A 51 GGFPDHPHRGFETVSYLLEGGSMAHEDFCGH-TGKMNPGDLQWMTAGRGIL 100 (290)
T ss_dssp CBEEEEEEBSEEEEEEECSSSCEEEEETTSC-EEEECTTCEEEEECTTCEE
T ss_pred CCCCCCCCCCeEEEEEECcceEEEEeeCCCC-ceEECCCcEEEEeCCCCEE
Confidence 358877 44455 77999 999999999885 7999999999999996443
No 197
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=54.75 E-value=2.4 Score=32.54 Aligned_cols=61 Identities=15% Similarity=0.222 Sum_probs=41.5
Q ss_pred CCeeecccccccccceeeEEEecCCceeeeeCCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCE
Q 031109 79 QPRVLPSKKTHLEAIWRILRWGCPPSKFPWTYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMS 149 (165)
Q Consensus 79 ~P~~~~~~~~~~~~~~~~GiWe~~pg~f~w~y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~ 149 (165)
=|+|..-..|.+.+. |-|+-+.+.|.-...+- --+....+.+.+| ..+..||.|++=|.++
T Consensus 30 CP~C~seytYeDg~l-----~vCPeC~hEW~~~~~~~--~~~~~~vvkDanG---n~L~dGDsVtvIKDLK 90 (138)
T 2akl_A 30 CPQCNSEYTYEDGAL-----LVCPECAHEWSPNEAAT--ASDDGKVIKDSVG---NVLQDGDTITVIKDLK 90 (138)
T ss_dssp CTTTCCCCCEECSSS-----EEETTTTEEECTTTTTC--CCCSCCSCBCTTS---CBCCTTCEEECCSCEE
T ss_pred CCCCCCcceEecCCe-----EECCccccccCCccccc--ccccCceEEcCCC---CCccCCCeEEEEeecc
Confidence 466777777777776 99999999996333211 1123345667677 5799999999877654
No 198
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=54.25 E-value=19 Score=26.43 Aligned_cols=43 Identities=23% Similarity=0.346 Sum_probs=28.4
Q ss_pred cCCceeeeeC--CCceEEEEEEcEEEEEe--CCCce--eEEEcCCcEEE
Q 031109 101 CPPSKFPWTY--SDKETCYLLEGKVKVYP--DGSNE--GVEIGAGDLVV 143 (165)
Q Consensus 101 ~~pg~f~w~y--~~dE~~yVLEG~vtVt~--dgG~e--~v~i~AGDlv~ 143 (165)
..++..-+.- +.+.+++|++|.|.+.. ++|.+ ...+++||.|-
T Consensus 27 ~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 75 (216)
T 4ev0_A 27 YPQGKPIFYQGDLGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFG 75 (216)
T ss_dssp ECTTCEEECTTCBCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEEC
T ss_pred eCCCCEEEeCCCCCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEe
Confidence 3445544332 35889999999999874 34522 24589999873
No 199
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=53.92 E-value=14 Score=33.11 Aligned_cols=52 Identities=12% Similarity=0.068 Sum_probs=34.9
Q ss_pred EEecCCcee-eeeCCCce---EEEEEEcEEEEE--eC---------------------------CCceeEEEcCCcEEEE
Q 031109 98 RWGCPPSKF-PWTYSDKE---TCYLLEGKVKVY--PD---------------------------GSNEGVEIGAGDLVVF 144 (165)
Q Consensus 98 iWe~~pg~f-~w~y~~dE---~~yVLEG~vtVt--~d---------------------------gG~e~v~i~AGDlv~f 144 (165)
+|-...+.+ ++|+|... +.+++.|+=++. +. .. -.++++|||++++
T Consensus 270 ~~mG~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~-~~~~l~pGe~lfI 348 (488)
T 3kv5_D 270 CLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKC-YKCVVKQGHTLFV 348 (488)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCC-EEEEEETTCEEEE
T ss_pred EEEcCCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccce-EEEeeCCCCEEEe
Confidence 366666665 47776544 457788875543 11 12 2578999999999
Q ss_pred cCCCEE
Q 031109 145 PKGMSC 150 (165)
Q Consensus 145 PkG~~~ 150 (165)
|.||-.
T Consensus 349 PsGWwH 354 (488)
T 3kv5_D 349 PTGWIH 354 (488)
T ss_dssp CTTCEE
T ss_pred CCCceE
Confidence 999943
No 200
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=52.96 E-value=13 Score=27.66 Aligned_cols=43 Identities=16% Similarity=0.116 Sum_probs=27.9
Q ss_pred ecCCceeeeeC--CCceEEEEEEcEEEEEe--CCCcee--EEEcCCcEE
Q 031109 100 GCPPSKFPWTY--SDKETCYLLEGKVKVYP--DGSNEG--VEIGAGDLV 142 (165)
Q Consensus 100 e~~pg~f~w~y--~~dE~~yVLEG~vtVt~--dgG~e~--v~i~AGDlv 142 (165)
...++.+-+.- +.+.+++|++|.|.+.- ++|.+. ..+++||.|
T Consensus 26 ~~~~g~~i~~~G~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 74 (213)
T 1o5l_A 26 VFRKGEIVKHQDDPIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQII 74 (213)
T ss_dssp EECTTCEEECTTCBCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEES
T ss_pred EECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEe
Confidence 33455544432 34778999999999863 455332 358899987
No 201
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=52.75 E-value=19 Score=27.46 Aligned_cols=44 Identities=16% Similarity=0.191 Sum_probs=28.7
Q ss_pred ecCCceeeeeC--CCceEEEEEEcEEEEEe--CCCce--eEEEcCCcEEE
Q 031109 100 GCPPSKFPWTY--SDKETCYLLEGKVKVYP--DGSNE--GVEIGAGDLVV 143 (165)
Q Consensus 100 e~~pg~f~w~y--~~dE~~yVLEG~vtVt~--dgG~e--~v~i~AGDlv~ 143 (165)
...++..-+.- ..+.+++|++|.|.+.- ++|.+ ...+++||+|-
T Consensus 47 ~~~~ge~i~~~G~~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G 96 (243)
T 3la7_A 47 TFERNKTIFFPGDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFG 96 (243)
T ss_dssp EECTTCEEECTTSBCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEES
T ss_pred EECCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEc
Confidence 33455544432 35789999999999874 44533 23489999873
No 202
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=51.31 E-value=22 Score=27.00 Aligned_cols=44 Identities=18% Similarity=0.200 Sum_probs=28.7
Q ss_pred ecCCceeeee--CCCceEEEEEEcEEEEEe--CCCcee--EEEcCCcEEE
Q 031109 100 GCPPSKFPWT--YSDKETCYLLEGKVKVYP--DGSNEG--VEIGAGDLVV 143 (165)
Q Consensus 100 e~~pg~f~w~--y~~dE~~yVLEG~vtVt~--dgG~e~--v~i~AGDlv~ 143 (165)
...++..-+. -+.+.+++|++|.|.+.. ++|.+. ..+++||.|-
T Consensus 36 ~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G 85 (250)
T 3e6c_C 36 DFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIG 85 (250)
T ss_dssp EECTTCEEECTTCCCCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred EECCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEe
Confidence 3344554443 245889999999999864 455332 3478999874
No 203
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=50.43 E-value=16 Score=26.82 Aligned_cols=43 Identities=21% Similarity=0.268 Sum_probs=28.7
Q ss_pred ecCCceeeee--CCCceEEEEEEcEEEEEe--CCCce--eEEEcCCcEE
Q 031109 100 GCPPSKFPWT--YSDKETCYLLEGKVKVYP--DGSNE--GVEIGAGDLV 142 (165)
Q Consensus 100 e~~pg~f~w~--y~~dE~~yVLEG~vtVt~--dgG~e--~v~i~AGDlv 142 (165)
...++..-+. -..+.+++|++|.|.+.. ++|.+ ...+++||.+
T Consensus 66 ~~~~ge~i~~~G~~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 66 AAPRDCQLLTEGDPGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp EECTTCEEECTTSCCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred EeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 3355554443 245889999999999875 34422 2358999986
No 204
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=49.75 E-value=68 Score=24.90 Aligned_cols=48 Identities=19% Similarity=0.166 Sum_probs=35.0
Q ss_pred CCCceEEEEEEcEE-EEEeCCCc--------eeEEEcC--CcEEEEcCCCEEEEEEcee
Q 031109 110 YSDKETCYLLEGKV-KVYPDGSN--------EGVEIGA--GDLVVFPKGMSCTWDVSVG 157 (165)
Q Consensus 110 y~~dE~~yVLEG~v-tVt~dgG~--------e~v~i~A--GDlv~fPkG~~~tW~V~e~ 157 (165)
.....+++++.|++ .|..|.+. ..+++.+ +..+.+|+|+-....+.+.
T Consensus 70 ~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd 128 (184)
T 2ixk_A 70 QAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSE 128 (184)
T ss_dssp SCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSS
T ss_pred CCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCC
Confidence 45899999999996 44444321 2466666 5889999999998887653
No 205
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=49.75 E-value=17 Score=27.18 Aligned_cols=43 Identities=21% Similarity=0.151 Sum_probs=27.4
Q ss_pred cCCceeeee--CCCceEEEEEEcEEEEEe--CCCce--eEEEcCCcEEE
Q 031109 101 CPPSKFPWT--YSDKETCYLLEGKVKVYP--DGSNE--GVEIGAGDLVV 143 (165)
Q Consensus 101 ~~pg~f~w~--y~~dE~~yVLEG~vtVt~--dgG~e--~v~i~AGDlv~ 143 (165)
..++..-+. -+.+.+++|++|.|.+.. ++|.+ ...+++||.|-
T Consensus 34 ~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 82 (231)
T 3e97_A 34 FQPDELVVEQDAEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVG 82 (231)
T ss_dssp ECTTCBCCCTTCTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEES
T ss_pred ECCCCEEEeCCCCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEe
Confidence 344454333 245789999999999875 34422 24589999874
No 206
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=48.93 E-value=29 Score=28.94 Aligned_cols=35 Identities=34% Similarity=0.601 Sum_probs=24.4
Q ss_pred eEEEE-EE---cEE--EEEeCCC--ceeEEEcCCcEEEEcCCC
Q 031109 114 ETCYL-LE---GKV--KVYPDGS--NEGVEIGAGDLVVFPKGM 148 (165)
Q Consensus 114 E~~yV-LE---G~v--tVt~dgG--~e~v~i~AGDlv~fPkG~ 148 (165)
|+.|. +. |-+ .+..++| ++.+.++-||+|.+|+|+
T Consensus 186 E~YYf~~~~~~gf~~q~vyt~d~~~de~~~V~~~d~VlvP~Gy 228 (270)
T 2qjv_A 186 ETYYHRFNPPQGFCLQRVYTDDRSLDECMAVYNRDVVXVPXGY 228 (270)
T ss_dssp EEEEEEEESTTCEEEEEEECTTSSSEEEEEEETTCEEEESSSB
T ss_pred eEEEEECCCCCCEEEEEEeCCCCCCceEEEEECCCEEecCCCc
Confidence 88876 44 322 2323332 468999999999999999
No 207
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=47.21 E-value=29 Score=26.19 Aligned_cols=34 Identities=15% Similarity=0.340 Sum_probs=23.2
Q ss_pred CCceEEEEEEcEEEEEe--CCCce-eEEEcCCcEEEE
Q 031109 111 SDKETCYLLEGKVKVYP--DGSNE-GVEIGAGDLVVF 144 (165)
Q Consensus 111 ~~dE~~yVLEG~vtVt~--dgG~e-~v~i~AGDlv~f 144 (165)
+.+.+++|++|.|.+.- ++|.+ .+.+.+||.|-.
T Consensus 35 ~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~G~~~Ge 71 (238)
T 2bgc_A 35 PQEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIM 71 (238)
T ss_dssp CCCEEEEEEESEEEEEEECTTSCEEEEEEEESSEEEE
T ss_pred CCceEEEEEecEEEEEEECCCCCEEEEEEcCCCEecc
Confidence 35788999999999864 44423 233449998854
No 208
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=46.91 E-value=7.4 Score=32.60 Aligned_cols=41 Identities=17% Similarity=0.170 Sum_probs=30.3
Q ss_pred cCCceeeee--CCCceEEEEEEcEEEEEeCCCceeEEEcCCcEE
Q 031109 101 CPPSKFPWT--YSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLV 142 (165)
Q Consensus 101 ~~pg~f~w~--y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv 142 (165)
..++..-+. -..+.+++|++|.|.+..++. ....+++||.|
T Consensus 158 ~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~-~v~~l~~G~~f 200 (381)
T 4din_B 158 HIAGETVIQQGNEGDNFYVVDQGEVDVYVNGE-WVTNISEGGSF 200 (381)
T ss_dssp CCTTCBSSCTTSBCCEEEECSSSEEEEEETTE-EEEEEESSCCB
T ss_pred ECCCCEEEeCCCCCCeEEEEEeeEEEEEECCe-EeeeCCCCCEE
Confidence 345554433 235889999999999998765 56779999976
No 209
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=46.73 E-value=10 Score=33.07 Aligned_cols=52 Identities=13% Similarity=0.158 Sum_probs=34.8
Q ss_pred EEecCCcee-eeeCCCce---EEEEEEcEEEEEe-----------------------------CCCceeEEEcCCcEEEE
Q 031109 98 RWGCPPSKF-PWTYSDKE---TCYLLEGKVKVYP-----------------------------DGSNEGVEIGAGDLVVF 144 (165)
Q Consensus 98 iWe~~pg~f-~w~y~~dE---~~yVLEG~vtVt~-----------------------------dgG~e~v~i~AGDlv~f 144 (165)
+|-..++.+ ++|+|... ..+++.|+=++.. +.+ -.++++|||++++
T Consensus 151 l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~-~ev~l~pGEtLfI 229 (371)
T 3k3o_A 151 CLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKC-YKCSVKQGQTLFI 229 (371)
T ss_dssp EEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCC-EEEEEETTCEEEE
T ss_pred EEEcCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCce-EEEEECCCcEEEe
Confidence 356666665 47776555 3467888755532 122 3578999999999
Q ss_pred cCCCEE
Q 031109 145 PKGMSC 150 (165)
Q Consensus 145 PkG~~~ 150 (165)
|.||-.
T Consensus 230 PsGWwH 235 (371)
T 3k3o_A 230 PTGWIH 235 (371)
T ss_dssp CTTCEE
T ss_pred CCCCeE
Confidence 999844
No 210
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=45.73 E-value=33 Score=26.74 Aligned_cols=41 Identities=17% Similarity=0.246 Sum_probs=27.4
Q ss_pred CCceeeeeC--CCceEEEEEEcEEEEEeCC---Cce--eEEEcCCcEE
Q 031109 102 PPSKFPWTY--SDKETCYLLEGKVKVYPDG---SNE--GVEIGAGDLV 142 (165)
Q Consensus 102 ~pg~f~w~y--~~dE~~yVLEG~vtVt~dg---G~e--~v~i~AGDlv 142 (165)
.++..-+.- ..+.+++|++|+|.+...+ |.+ ...+++||.|
T Consensus 186 ~~g~~I~~~G~~~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~f 233 (299)
T 3shr_A 186 ENGEYIIRQGARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWF 233 (299)
T ss_dssp CTTCEEECTTCEECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEE
T ss_pred CCCCEEEeCCCCCCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEe
Confidence 444444332 3478999999999998643 322 3468999987
No 211
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=45.26 E-value=12 Score=31.87 Aligned_cols=59 Identities=15% Similarity=0.028 Sum_probs=39.8
Q ss_pred eEEEecCCcee-eeeCCCce---EEEEEEcEEEEE--eCC----------------------------------------
Q 031109 96 ILRWGCPPSKF-PWTYSDKE---TCYLLEGKVKVY--PDG---------------------------------------- 129 (165)
Q Consensus 96 ~GiWe~~pg~f-~w~y~~dE---~~yVLEG~vtVt--~dg---------------------------------------- 129 (165)
.-+|-..++.. ++|++..+ +..++.|+=++. +.+
T Consensus 174 ~~~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~ 253 (336)
T 3k2o_A 174 RWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEF 253 (336)
T ss_dssp EEEEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGG
T ss_pred eEEEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccC
Confidence 44677777664 68888766 788888864432 111
Q ss_pred CceeEEEcCCcEEEEcCCCEEEEEE
Q 031109 130 SNEGVEIGAGDLVVFPKGMSCTWDV 154 (165)
Q Consensus 130 G~e~v~i~AGDlv~fPkG~~~tW~V 154 (165)
..-.+.++|||++++|.||-..=..
T Consensus 254 ~~~~~~l~pGd~l~iP~gw~H~v~~ 278 (336)
T 3k2o_A 254 KPLEILQKPGETVFVPGGWWHVVLN 278 (336)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEE
T ss_pred ceEEEEECCCCEEEeCCCCcEEEec
Confidence 0024779999999999998655433
No 212
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=44.43 E-value=25 Score=30.83 Aligned_cols=18 Identities=17% Similarity=0.337 Sum_probs=15.8
Q ss_pred eEEEcCCcEEEEcCCCEE
Q 031109 133 GVEIGAGDLVVFPKGMSC 150 (165)
Q Consensus 133 ~v~i~AGDlv~fPkG~~~ 150 (165)
.+.++|||++++|.||-.
T Consensus 245 ev~l~pGEtlfIPsGWwH 262 (392)
T 3pua_A 245 KCIVKQGQTLFIPSGWIY 262 (392)
T ss_dssp EEEEETTCEEEECTTCEE
T ss_pred EEEECCCcEEeeCCCceE
Confidence 688999999999999843
No 213
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=44.40 E-value=46 Score=27.66 Aligned_cols=40 Identities=23% Similarity=0.278 Sum_probs=26.3
Q ss_pred CceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEE
Q 031109 112 DKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWD 153 (165)
Q Consensus 112 ~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~ 153 (165)
..=+.||++|+++|..++. ...+.++.++++..|-..+-.
T Consensus 190 ~~~~lyv~~G~v~v~g~~~--~~~~~~~~~~~l~~gd~~~i~ 229 (290)
T 1j1l_A 190 WTSFIYTISGDVYIGPDDA--QQKIEPHHTAVLGEGDSVQVE 229 (290)
T ss_dssp CEEEEEEEESCEEESCTTS--CEEECTTEEEEECSCSEEEEE
T ss_pred CEEEEEEEeCeEEECCccc--ceeccCceEEEecCCCEEEEE
Confidence 4678999999999943221 255666777777666554433
No 214
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=44.03 E-value=12 Score=33.38 Aligned_cols=51 Identities=14% Similarity=0.175 Sum_probs=34.8
Q ss_pred EecCCcee-eeeCCCce---EEEEEEcEEEEEe-----------------------------CCCceeEEEcCCcEEEEc
Q 031109 99 WGCPPSKF-PWTYSDKE---TCYLLEGKVKVYP-----------------------------DGSNEGVEIGAGDLVVFP 145 (165)
Q Consensus 99 We~~pg~f-~w~y~~dE---~~yVLEG~vtVt~-----------------------------dgG~e~v~i~AGDlv~fP 145 (165)
|-...+.+ ++|+|... ..+++.|+=+... +.+ -.++++|||++++|
T Consensus 236 ~mG~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~-~~v~l~pGetlfIP 314 (447)
T 3kv4_A 236 LMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKC-YKCSVKQGQTLFIP 314 (447)
T ss_dssp EEECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCC-EEEEEETTCEEEEC
T ss_pred EEeCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccce-EEEEECCCcEEecC
Confidence 55566665 47777555 4578888766532 122 26789999999999
Q ss_pred CCCEE
Q 031109 146 KGMSC 150 (165)
Q Consensus 146 kG~~~ 150 (165)
.||-.
T Consensus 315 sGWwH 319 (447)
T 3kv4_A 315 TGWIH 319 (447)
T ss_dssp TTCEE
T ss_pred CCCeE
Confidence 99843
No 215
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=42.88 E-value=68 Score=26.62 Aligned_cols=23 Identities=13% Similarity=0.442 Sum_probs=14.1
Q ss_pred eEEEcCCcEEEEcCCCEEEEEEc
Q 031109 133 GVEIGAGDLVVFPKGMSCTWDVS 155 (165)
Q Consensus 133 ~v~i~AGDlv~fPkG~~~tW~V~ 155 (165)
.+.+.||+.+.+|.|....|...
T Consensus 173 ~i~L~PGESiTl~Pg~~H~F~ae 195 (246)
T 3kmh_A 173 QLRLSPGESICLPPGLYHSFWAE 195 (246)
T ss_dssp EEEECTTCEEEECTTEEEEEEEC
T ss_pred EEEECCCCeEecCCCCEEEEEec
Confidence 45566666677776666555443
No 216
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=42.80 E-value=95 Score=24.68 Aligned_cols=56 Identities=16% Similarity=0.300 Sum_probs=38.7
Q ss_pred CCceee-eeC-----CCceEEEEEEcEEE-EEeC--CCc------eeEEEcC--CcEEEEcCCCEEEEEEcee
Q 031109 102 PPSKFP-WTY-----SDKETCYLLEGKVK-VYPD--GSN------EGVEIGA--GDLVVFPKGMSCTWDVSVG 157 (165)
Q Consensus 102 ~pg~f~-w~y-----~~dE~~yVLEG~vt-Vt~d--gG~------e~v~i~A--GDlv~fPkG~~~tW~V~e~ 157 (165)
.+|..+ +|| ...++++++.|++. |..| .++ ..+++.+ +-.+.+|+|+-....+.+.
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd 150 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVP 150 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSS
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCC
Confidence 355544 443 37899999999962 3333 222 3567776 7899999999998887653
No 217
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=42.72 E-value=28 Score=30.59 Aligned_cols=18 Identities=17% Similarity=0.311 Sum_probs=15.7
Q ss_pred eEEEcCCcEEEEcCCCEE
Q 031109 133 GVEIGAGDLVVFPKGMSC 150 (165)
Q Consensus 133 ~v~i~AGDlv~fPkG~~~ 150 (165)
.+.++|||++++|.||-.
T Consensus 246 ~v~l~pGe~lfIPsGW~H 263 (397)
T 3kv9_A 246 KCVVKQGHTLFVPTGWIH 263 (397)
T ss_dssp EEEEETTCEEEECTTCEE
T ss_pred EEEECCCCEEEeCCCCeE
Confidence 578999999999999843
No 218
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=41.79 E-value=28 Score=27.67 Aligned_cols=41 Identities=12% Similarity=0.050 Sum_probs=27.5
Q ss_pred CCceeeeeC--CCceEEEEEEcEEEEEe--CCCce-eEEEcCCcEE
Q 031109 102 PPSKFPWTY--SDKETCYLLEGKVKVYP--DGSNE-GVEIGAGDLV 142 (165)
Q Consensus 102 ~pg~f~w~y--~~dE~~yVLEG~vtVt~--dgG~e-~v~i~AGDlv 142 (165)
.++..-+.- ..+.+++|++|.|.+.. ++|.+ ...+++||.|
T Consensus 42 ~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~f 87 (333)
T 4ava_A 42 AAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIV 87 (333)
T ss_dssp CTTCEEECTTSBCCCEEEEEECCEEEEEECTTCCEEEEEECTTCEE
T ss_pred CCCCEEEeCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEe
Confidence 445544432 35889999999999975 33422 3558999987
No 219
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=41.40 E-value=65 Score=26.75 Aligned_cols=45 Identities=20% Similarity=0.240 Sum_probs=32.5
Q ss_pred eeeCCCceEEEEEEc-------------------EEEEEeCCCceeEEEcCCcEEEEcCCCEEEEE
Q 031109 107 PWTYSDKETCYLLEG-------------------KVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWD 153 (165)
Q Consensus 107 ~w~y~~dE~~yVLEG-------------------~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~ 153 (165)
.+|....|.++..-| .|+|..|| ...++.||..+.+.+|-+.|-.
T Consensus 122 H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG--~~~~~~aG~~i~L~PGESiTl~ 185 (246)
T 3kmh_A 122 HFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDG--CRQKHTAGSQLRLSPGESICLP 185 (246)
T ss_dssp EEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETT--EEEEECTTCEEEECTTCEEEEC
T ss_pred ccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCC--eEEEeCCCCEEEECCCCeEecC
Confidence 345667888876666 44455544 3688999999999999988753
No 220
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=40.60 E-value=30 Score=31.63 Aligned_cols=18 Identities=28% Similarity=0.444 Sum_probs=15.8
Q ss_pred eEEEcCCcEEEEcCCCEE
Q 031109 133 GVEIGAGDLVVFPKGMSC 150 (165)
Q Consensus 133 ~v~i~AGDlv~fPkG~~~ 150 (165)
.+.+.|||++++|.||-.
T Consensus 367 ~v~l~pGEtlfIPsGW~H 384 (528)
T 3pur_A 367 RVVIKEGQTLLIPAGWIH 384 (528)
T ss_dssp EEEEETTCEEEECTTCEE
T ss_pred EEEECCCCEEEecCCceE
Confidence 488999999999999943
No 221
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=39.03 E-value=1.1e+02 Score=24.04 Aligned_cols=46 Identities=13% Similarity=0.252 Sum_probs=35.0
Q ss_pred CceEEEEEEcEE-EEEeCCC--------ceeEEEcC--CcEEEEcCCCEEEEEEcee
Q 031109 112 DKETCYLLEGKV-KVYPDGS--------NEGVEIGA--GDLVVFPKGMSCTWDVSVG 157 (165)
Q Consensus 112 ~dE~~yVLEG~v-tVt~dgG--------~e~v~i~A--GDlv~fPkG~~~tW~V~e~ 157 (165)
...+++++.|++ .|..|.+ -..+++.+ +..+.||+|+.....+.+.
T Consensus 89 q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd 145 (196)
T 1wlt_A 89 QGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALED 145 (196)
T ss_dssp CEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSS
T ss_pred CceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCC
Confidence 689999999999 5555543 13466776 6899999999998887654
No 222
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=36.36 E-value=34 Score=28.63 Aligned_cols=44 Identities=14% Similarity=0.086 Sum_probs=29.6
Q ss_pred ecCCceeeeeC--CCceEEEEEEcEEEEEeC--CCc----eeEEEcCCcEEE
Q 031109 100 GCPPSKFPWTY--SDKETCYLLEGKVKVYPD--GSN----EGVEIGAGDLVV 143 (165)
Q Consensus 100 e~~pg~f~w~y--~~dE~~yVLEG~vtVt~d--gG~----e~v~i~AGDlv~ 143 (165)
...+|..-+.- ..+.+++|++|.|.+... +|. ....+++||.|=
T Consensus 69 ~~~~g~~i~~~Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fG 120 (469)
T 1o7f_A 69 NLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFG 120 (469)
T ss_dssp EECTTCEEECTTSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEEC
T ss_pred EECCCCEEEeCCCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcc
Confidence 44555554442 358899999999999753 331 235688999874
No 223
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=35.74 E-value=73 Score=25.17 Aligned_cols=47 Identities=17% Similarity=0.225 Sum_probs=38.4
Q ss_pred CCceEEEEEEcE-EEEEeCCCceeEEE-cCCcEEEEcCCCEEEEEEce-eeE
Q 031109 111 SDKETCYLLEGK-VKVYPDGSNEGVEI-GAGDLVVFPKGMSCTWDVSV-GVD 159 (165)
Q Consensus 111 ~~dE~~yVLEG~-vtVt~dgG~e~v~i-~AGDlv~fPkG~~~tW~V~e-~vr 159 (165)
..+=+..+|+|. ++++.++. ... + .+++.+.|+-++...=+... +++
T Consensus 60 GidR~i~lL~G~g~~L~~~~~-~~~-L~~~~~p~~F~G~~~v~a~L~~G~~~ 109 (200)
T 1yll_A 60 GYQRIISVLEGGGMRLRVDGA-ESA-PLRARQAFAFSGDSEVHCTLLDGAIR 109 (200)
T ss_dssp TCEEEEEEEESSCEEEEETTE-ECC-CBCBTCCEEEETTSCEEEEESSSCEE
T ss_pred CccEEEEEEeCCcEEEecCCC-ccc-cCCCCCcEEeCCCCcEEEEECCCCEE
Confidence 579999999998 99999887 445 7 99999999999988777543 444
No 224
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus}
Probab=35.19 E-value=46 Score=30.66 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=31.0
Q ss_pred ecCCceeeeeC--CCceEEEEEEcEEEEEeCCCceeEEEcCCcEE
Q 031109 100 GCPPSKFPWTY--SDKETCYLLEGKVKVYPDGSNEGVEIGAGDLV 142 (165)
Q Consensus 100 e~~pg~f~w~y--~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv 142 (165)
...+|.+-+.- ..+.+++|++|.|.+...|......+++||.|
T Consensus 60 ~~~kGe~I~~eGd~~~~lyiIlsG~V~v~~~g~~il~~l~~Gd~f 104 (694)
T 3cf6_E 60 HAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDF 104 (694)
T ss_dssp ECSTTCEEECTTSBCCEEEEEEESEEEEEETTTEEEEEEETTCEE
T ss_pred EECCCCEEECCCCcCCeEEEEEEEEEEEEEeCCEEEEEeCCCCEe
Confidence 34566655443 35889999999999988764235678999976
No 225
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=34.38 E-value=54 Score=27.74 Aligned_cols=43 Identities=12% Similarity=-0.035 Sum_probs=27.9
Q ss_pred ecCCceeeee--CCCceEEEEEEcEEEEEeCC--------Cc--eeEEEcCCcEE
Q 031109 100 GCPPSKFPWT--YSDKETCYLLEGKVKVYPDG--------SN--EGVEIGAGDLV 142 (165)
Q Consensus 100 e~~pg~f~w~--y~~dE~~yVLEG~vtVt~dg--------G~--e~v~i~AGDlv 142 (165)
...++..-+. -..+.+++|++|+|.|...+ |. ....+++||.|
T Consensus 294 ~~~~Ge~I~~eGd~~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 294 VYNDGEQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYF 348 (416)
T ss_dssp EECTTCEEECTTSCCCEEEEEEEEEEEEECC------------CEEEEECTTCEE
T ss_pred EECCCCEEEeCCCcCCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCCCEe
Confidence 3445554443 24588999999999998543 21 13568899976
No 226
>1g31_A GP31; chaperone, CO-chaperonin, groes, in VIVO protein folding, bacteriophage T4; 2.30A {Enterobacteria phage T4} SCOP: b.35.1.1 PDB: 2cgt_O
Probab=33.94 E-value=13 Score=27.22 Aligned_cols=28 Identities=21% Similarity=0.118 Sum_probs=18.8
Q ss_pred EcEEEEEeCCCceeEEEcCCcEEEEcCCC
Q 031109 120 EGKVKVYPDGSNEGVEIGAGDLVVFPKGM 148 (165)
Q Consensus 120 EG~vtVt~dgG~e~v~i~AGDlv~fPkG~ 148 (165)
+|+|.-.-.|. .+..++.||.|.||+|-
T Consensus 48 ~g~VvAVG~g~-~~~~vKvGD~Vl~~kg~ 75 (111)
T 1g31_A 48 LCVVHSVGPDV-PEGFCEVGDLTSLPVGQ 75 (111)
T ss_dssp EEEEEEECTTS-CTTSCCTTCEEEEEGGG
T ss_pred eEEEEEECCCC-ccccccCCCEEEECCCc
Confidence 56664433333 34558899999999965
No 227
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=33.92 E-value=25 Score=25.92 Aligned_cols=44 Identities=16% Similarity=0.209 Sum_probs=29.1
Q ss_pred ecCCceeeeeC--CCceEEEEEEcEEEEEeC--CCce--eEEEcCCcEEE
Q 031109 100 GCPPSKFPWTY--SDKETCYLLEGKVKVYPD--GSNE--GVEIGAGDLVV 143 (165)
Q Consensus 100 e~~pg~f~w~y--~~dE~~yVLEG~vtVt~d--gG~e--~v~i~AGDlv~ 143 (165)
...+|..-+.- +.+.+++|++|.|.+... +|.+ ...+++||.|-
T Consensus 36 ~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 85 (227)
T 3dkw_A 36 NLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFA 85 (227)
T ss_dssp ECCTTEEEECTTSBCCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEES
T ss_pred EECCCCEEEcCCCccceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEee
Confidence 44555654442 357899999999998753 3322 24588999874
No 228
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=33.82 E-value=49 Score=27.44 Aligned_cols=31 Identities=19% Similarity=0.302 Sum_probs=23.5
Q ss_pred CceEEEEEEcEEEEEeCC--Cce---eEEEcCCcEE
Q 031109 112 DKETCYLLEGKVKVYPDG--SNE---GVEIGAGDLV 142 (165)
Q Consensus 112 ~dE~~yVLEG~vtVt~dg--G~e---~v~i~AGDlv 142 (165)
.+.+++|++|+|.+...+ |++ ...+++||.|
T Consensus 289 ~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~f 324 (381)
T 4din_B 289 GDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYF 324 (381)
T ss_dssp CCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEE
T ss_pred CCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEe
Confidence 578999999999998642 212 4568999987
No 229
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=33.70 E-value=19 Score=30.02 Aligned_cols=18 Identities=22% Similarity=0.220 Sum_probs=15.8
Q ss_pred eEEEcCCcEEEEcCCCEE
Q 031109 133 GVEIGAGDLVVFPKGMSC 150 (165)
Q Consensus 133 ~v~i~AGDlv~fPkG~~~ 150 (165)
.+.+++||.+++|+|.-.
T Consensus 159 ~v~l~pGd~~~ipaGt~H 176 (300)
T 1zx5_A 159 TFETTPYDTFVIRPGIPH 176 (300)
T ss_dssp EEECCTTCEEEECTTCCE
T ss_pred eeECCCCCEEEcCCCCce
Confidence 688999999999999854
No 230
>3anw_A GINS51, putative uncharacterized protein; SLD5 superfamily, DNA replication, replication; 2.65A {Thermococcus kodakarensis}
Probab=33.36 E-value=14 Score=28.88 Aligned_cols=32 Identities=19% Similarity=0.226 Sum_probs=22.3
Q ss_pred eEEEEEEcEEEEEeCCCceeEE-EcCCcEEEEcC
Q 031109 114 ETCYLLEGKVKVYPDGSNEGVE-IGAGDLVVFPK 146 (165)
Q Consensus 114 E~~yVLEG~vtVt~dgG~e~v~-i~AGDlv~fPk 146 (165)
|...|++.-=.+...++ ..+. |++||+|++|+
T Consensus 137 e~~~v~~d~p~i~~~d~-r~Y~Pl~~~Dvv~LP~ 169 (188)
T 3anw_A 137 EAYIIQIDLPAVLGPDM-KEYGPFMAGDMAIIPT 169 (188)
T ss_dssp EEEEECSCBCCEECTTS-CEECCBCTTCEEEEEH
T ss_pred cceEEEeCCCceecCCc-CcccCCCcccEEeecH
Confidence 33344555545666666 4788 99999999996
No 231
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=33.06 E-value=11 Score=28.48 Aligned_cols=37 Identities=19% Similarity=0.266 Sum_probs=24.5
Q ss_pred eCCCceEEEEEEcEEEEEeCCCceeEEEcCCcEEEEcCCCE
Q 031109 109 TYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMS 149 (165)
Q Consensus 109 ~y~~dE~~yVLEG~vtVt~dgG~e~v~i~AGDlv~fPkG~~ 149 (165)
+|. +|+++-+.-. +..++. ....+.+||+..+|.|-.
T Consensus 50 ~~g-~E~y~~~p~~--l~~~e~-~~~~~~~GDIaYw~pgg~ 86 (136)
T 1zx8_A 50 TWG-EEIYFSTPVN--VQKMEN-PREVVEIGDVGYWPPGKA 86 (136)
T ss_dssp ESS-SEEEEECSCC--CCCCSS-EESSBCTTEEEEEGGGTE
T ss_pred HhC-CcEEEECCcc--CCCCCC-CCccCCCCcEEEeCCCCE
Confidence 365 7877766533 333233 356789999999998754
No 232
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=31.19 E-value=1.8e+02 Score=22.40 Aligned_cols=47 Identities=19% Similarity=0.188 Sum_probs=34.4
Q ss_pred CCceEEEEEEcEE-EEEeCCC--------ceeEEEcC--CcEEEEcCCCEEEEEEcee
Q 031109 111 SDKETCYLLEGKV-KVYPDGS--------NEGVEIGA--GDLVVFPKGMSCTWDVSVG 157 (165)
Q Consensus 111 ~~dE~~yVLEG~v-tVt~dgG--------~e~v~i~A--GDlv~fPkG~~~tW~V~e~ 157 (165)
....+++++.|++ .|..|.+ -..+++.+ +..+.+|+|+-....+.+.
T Consensus 70 ~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd 127 (183)
T 1dzr_A 70 AQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSE 127 (183)
T ss_dssp CCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSS
T ss_pred CCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCC
Confidence 5689999999996 4444432 13466666 5889999999998887653
No 233
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=29.93 E-value=2e+02 Score=22.61 Aligned_cols=46 Identities=17% Similarity=0.209 Sum_probs=34.9
Q ss_pred CceEEEEEEcEE-EEEeCCC--------ceeEEEcC--CcEEEEcCCCEEEEEEcee
Q 031109 112 DKETCYLLEGKV-KVYPDGS--------NEGVEIGA--GDLVVFPKGMSCTWDVSVG 157 (165)
Q Consensus 112 ~dE~~yVLEG~v-tVt~dgG--------~e~v~i~A--GDlv~fPkG~~~tW~V~e~ 157 (165)
...+++++.|++ .|..|.+ -..+++.+ +..+.+|+|+-....+.+.
T Consensus 71 q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd 127 (205)
T 1oi6_A 71 TAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALED 127 (205)
T ss_dssp CCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECST
T ss_pred CceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccC
Confidence 689999999996 4555543 13466776 5789999999998887653
No 234
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=28.51 E-value=72 Score=26.92 Aligned_cols=41 Identities=5% Similarity=-0.048 Sum_probs=27.3
Q ss_pred CCceeeeeC--CCceEEEEEEcEEEEEe-CCCce--eEEEcCCcEE
Q 031109 102 PPSKFPWTY--SDKETCYLLEGKVKVYP-DGSNE--GVEIGAGDLV 142 (165)
Q Consensus 102 ~pg~f~w~y--~~dE~~yVLEG~vtVt~-dgG~e--~v~i~AGDlv 142 (165)
.++..-+.- ..+.+++|++|.|.|.. .+|.+ ...+.+||.|
T Consensus 174 ~~Ge~I~~qGd~~d~~YiI~sG~v~v~~~~~G~~~~v~~l~~G~~f 219 (416)
T 3tnp_B 174 KEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSF 219 (416)
T ss_dssp CTTCEEECTTSCCCEEEEEEECEEEEEEECSSCEEEEEEEESCCEE
T ss_pred CCCCEEEeCCCCCceEEEEEeeEEEEEEecCCCEEEEEEecCCCEE
Confidence 455544442 45889999999999874 33422 2358899966
No 235
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=27.46 E-value=1.2e+02 Score=23.86 Aligned_cols=55 Identities=16% Similarity=0.192 Sum_probs=40.1
Q ss_pred Cceee-eeC-CCceEEEEEE-cEE-EEEeCCC-------ceeEEEcCCcEEEEcCCCEEEEEEcee
Q 031109 103 PSKFP-WTY-SDKETCYLLE-GKV-KVYPDGS-------NEGVEIGAGDLVVFPKGMSCTWDVSVG 157 (165)
Q Consensus 103 pg~f~-w~y-~~dE~~yVLE-G~v-tVt~dgG-------~e~v~i~AGDlv~fPkG~~~tW~V~e~ 157 (165)
+|..+ ||| ....+++++. |++ .|..|.+ -..+++.++-.+.+|+|+-....+.+.
T Consensus 69 ~GvlRGlH~h~q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd 134 (197)
T 1nxm_A 69 KNVLRGLHAEPWDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSD 134 (197)
T ss_dssp TTBEEEEEECSSCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSS
T ss_pred CCCcceeeecccceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccC
Confidence 34433 553 5789999999 994 4554442 246788899999999999988877653
No 236
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=27.39 E-value=34 Score=29.66 Aligned_cols=19 Identities=11% Similarity=0.190 Sum_probs=16.0
Q ss_pred eEEEcCCcEEEEcCCCEEE
Q 031109 133 GVEIGAGDLVVFPKGMSCT 151 (165)
Q Consensus 133 ~v~i~AGDlv~fPkG~~~t 151 (165)
.+.+++||.+++|+|.-..
T Consensus 241 ~v~l~pGd~~fipAG~~HA 259 (394)
T 2wfp_A 241 VVKLNPGEAMFLFAETPHA 259 (394)
T ss_dssp EEEECTTCEEEECTTCCEE
T ss_pred EEECCCCCEEEcCCCCceE
Confidence 5789999999999998543
No 237
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=27.38 E-value=17 Score=27.10 Aligned_cols=15 Identities=40% Similarity=0.804 Sum_probs=11.8
Q ss_pred EEcCCcEEEEcCCCE
Q 031109 135 EIGAGDLVVFPKGMS 149 (165)
Q Consensus 135 ~i~AGDlv~fPkG~~ 149 (165)
+++|||||+|..|-.
T Consensus 67 ~l~pGDLvFf~~~~~ 81 (135)
T 2k1g_A 67 NLRTGDLVLFRAGST 81 (135)
T ss_dssp GCCTTEEEEEEETTT
T ss_pred HccCCcEEEECCCCC
Confidence 478999999976543
No 238
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=26.90 E-value=1.3e+02 Score=24.04 Aligned_cols=54 Identities=26% Similarity=0.444 Sum_probs=33.4
Q ss_pred eEEEecCCce--eeee-CCCceEEEEEEc---EEEEEeCCCceeEEEcC----Cc--EEEEcCCCE
Q 031109 96 ILRWGCPPSK--FPWT-YSDKETCYLLEG---KVKVYPDGSNEGVEIGA----GD--LVVFPKGMS 149 (165)
Q Consensus 96 ~GiWe~~pg~--f~w~-y~~dE~~yVLEG---~vtVt~dgG~e~v~i~A----GD--lv~fPkG~~ 149 (165)
+=.+=-+++. -.|| .+.||+-|...| .+.|.++|.-+.+.+++ |+ -+++|+|.-
T Consensus 81 aIYfLL~~~~~~S~wHRv~sdEiW~~h~G~p~~~li~~dg~~~~~~LG~dl~~Ge~pQ~vVPaG~W 146 (203)
T 1xe7_A 81 LIYYLLTPDSPIGKFHKNINRIIHILQRGKGQYVLVYPDGQVKSFKVGFDYKNGEVSQWVVPGGVF 146 (203)
T ss_dssp EEEEEEBTTBCEEEEEEESSCEEEEEEEECEEEEEECTTSCEEEEEESSCGGGTCBSEEEECTTCE
T ss_pred EEEEEEcCCCCcccceeeCCCEEEEEEcCCccEEEEcCCCCEEEEEeCCCcccCcccEEEEcCCEE
Confidence 3345555553 4576 589999999999 43334444423445553 33 489999964
No 239
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=26.71 E-value=43 Score=27.16 Aligned_cols=36 Identities=19% Similarity=0.379 Sum_probs=23.6
Q ss_pred cEEEEEeCCCceeEEEcCCcEEEEcCCCEEEEEEceeeE
Q 031109 121 GKVKVYPDGSNEGVEIGAGDLVVFPKGMSCTWDVSVGVD 159 (165)
Q Consensus 121 G~vtVt~dgG~e~v~i~AGDlv~fPkG~~~tW~V~e~vr 159 (165)
|+..+...++...+.-++|++++||.++ .+-..||.
T Consensus 147 Getvf~~~~~~~~V~P~~G~~v~F~s~~---lH~v~pV~ 182 (243)
T 3dkq_A 147 GELVIQDTYGQQSIKLSAGSLVLYPSSS---LHQVTPVL 182 (243)
T ss_dssp CCEEEEETTEEEEECCCTTCEEEEETTS---EEEECCEE
T ss_pred ceEEEeeCCCcEEEecCCCEEEEECCCC---eEcCcccc
Confidence 5555555443346777899999999875 44444554
No 240
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=24.12 E-value=53 Score=29.01 Aligned_cols=19 Identities=26% Similarity=0.317 Sum_probs=15.7
Q ss_pred eEEEcCCcEEEEcCCCEEE
Q 031109 133 GVEIGAGDLVVFPKGMSCT 151 (165)
Q Consensus 133 ~v~i~AGDlv~fPkG~~~t 151 (165)
.+.-++||+|+||+|+...
T Consensus 294 ~~~Q~~GeavfiPaG~~HQ 312 (392)
T 2ypd_A 294 TLIQFLGDAIVLPAGALHQ 312 (392)
T ss_dssp EEEEETTCEEEECTTCEEE
T ss_pred EEEEcCCCEEEecCCCHHH
Confidence 3555899999999999765
No 241
>3jxo_A TRKA-N domain protein; TRKA K+ channel component, structural genomics, PSI-2-2, Pro structure initiative, joint center for structural genomics; 1.55A {Thermotoga SP}
Probab=23.44 E-value=47 Score=21.40 Aligned_cols=27 Identities=30% Similarity=0.420 Sum_probs=16.6
Q ss_pred EEEEEEcEEEEEeCCCceeEEEcCCcEEEE
Q 031109 115 TCYLLEGKVKVYPDGSNEGVEIGAGDLVVF 144 (165)
Q Consensus 115 ~~yVLEG~vtVt~dgG~e~v~i~AGDlv~f 144 (165)
++-|..|.-.+.+. + ...+++||.+++
T Consensus 43 i~~I~R~~~~~~p~-~--~~~l~~GD~l~v 69 (86)
T 3jxo_A 43 IAAIVRGGVLVVPR-G--DTEILSGDKLYV 69 (86)
T ss_dssp EEEEEETTEEECCC-T--TCBCCTTCEEEE
T ss_pred EEEEEECCEEECCC-C--CCEECCCCEEEE
Confidence 34444444444454 3 368999999876
No 242
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=23.24 E-value=2.9e+02 Score=22.14 Aligned_cols=46 Identities=13% Similarity=0.130 Sum_probs=34.7
Q ss_pred CceEEEEEEcEE-EEEeCCC--------ceeEEEcC--CcEEEEcCCCEEEEEEcee
Q 031109 112 DKETCYLLEGKV-KVYPDGS--------NEGVEIGA--GDLVVFPKGMSCTWDVSVG 157 (165)
Q Consensus 112 ~dE~~yVLEG~v-tVt~dgG--------~e~v~i~A--GDlv~fPkG~~~tW~V~e~ 157 (165)
...+++++.|++ .|..|.+ -..+++.+ +..+.||+|+-....+.+.
T Consensus 90 q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd 146 (225)
T 1upi_A 90 QAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQD 146 (225)
T ss_dssp CCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSS
T ss_pred cceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCC
Confidence 689999999997 4555543 12466666 4799999999998887653
No 243
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=22.53 E-value=2.9e+02 Score=21.94 Aligned_cols=46 Identities=17% Similarity=0.182 Sum_probs=34.1
Q ss_pred CceEEEEEEcEE-EEEeCCC--------ceeEEEcCC--cEEEEcCCCEEEEEEcee
Q 031109 112 DKETCYLLEGKV-KVYPDGS--------NEGVEIGAG--DLVVFPKGMSCTWDVSVG 157 (165)
Q Consensus 112 ~dE~~yVLEG~v-tVt~dgG--------~e~v~i~AG--Dlv~fPkG~~~tW~V~e~ 157 (165)
...+++++.|++ .|..|.+ -..+++.+- ..+.||+|+-....+.+.
T Consensus 79 q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd 135 (216)
T 2c0z_A 79 QAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISD 135 (216)
T ss_dssp CCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSS
T ss_pred cceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCC
Confidence 689999999996 4444443 134667764 799999999998887653
No 244
>3tbm_A Putative uncharacterized protein; iron-sulfur, CDGSH, metal binding protein; HET: 2PE TLA; 1.80A {Ralstonia solanacearum}
Probab=20.96 E-value=59 Score=21.83 Aligned_cols=19 Identities=16% Similarity=0.587 Sum_probs=13.9
Q ss_pred EEEEcEEEEEeCCCceeEEE
Q 031109 117 YLLEGKVKVYPDGSNEGVEI 136 (165)
Q Consensus 117 yVLEG~vtVt~dgG~e~v~i 136 (165)
|+++|.+.|...+| +.+..
T Consensus 18 l~V~G~v~i~~~dG-~~~~~ 36 (69)
T 3tbm_A 18 YHIKGSFRIVTQGG-RELPV 36 (69)
T ss_dssp EEEESSCEEEESSC-CEECC
T ss_pred EEEECCCeEECCCC-CEEee
Confidence 67888888888888 34443
No 245
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=20.29 E-value=1.2e+02 Score=28.59 Aligned_cols=47 Identities=11% Similarity=0.039 Sum_probs=30.8
Q ss_pred eEEEe-cCCceeeeeC--CCceEEEEEEcEEEEEeC------CCceeEEEcCCcEE
Q 031109 96 ILRWG-CPPSKFPWTY--SDKETCYLLEGKVKVYPD------GSNEGVEIGAGDLV 142 (165)
Q Consensus 96 ~GiWe-~~pg~f~w~y--~~dE~~yVLEG~vtVt~d------gG~e~v~i~AGDlv 142 (165)
+...+ ..+|..-+.. ..+.++.|++|+|.|... ++....++++||.|
T Consensus 64 ~m~ye~~~~Ge~IfrqGd~gd~fYIIlsGsV~V~i~~~~~~~~~~~v~~l~~G~sF 119 (999)
T 4f7z_A 64 CGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAF 119 (999)
T ss_dssp HCEEEEECTTCEEECTTSCCCEEEEEEESEEEEEECSSSCTTSCEEEEEEETTCEE
T ss_pred heEEEEECCCCEEEcCCCcCCEEEEEEeeEEEEEEecCCCCCCceeEEEecCCcch
Confidence 34443 3666655543 468899999999999752 12113578999976
No 246
>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A
Probab=20.22 E-value=25 Score=25.19 Aligned_cols=14 Identities=50% Similarity=0.885 Sum_probs=12.1
Q ss_pred eEEEcCCcEEEEcC
Q 031109 133 GVEIGAGDLVVFPK 146 (165)
Q Consensus 133 ~v~i~AGDlv~fPk 146 (165)
+..++.||.|+|++
T Consensus 61 p~~VkvGD~Vlf~k 74 (100)
T 1we3_O 61 PLEVKEGDIVVFAK 74 (100)
T ss_dssp CCSCCTTCEEEECT
T ss_pred eeecCCCCEEEECC
Confidence 34699999999998
No 247
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=20.06 E-value=2.8e+02 Score=21.40 Aligned_cols=54 Identities=15% Similarity=0.216 Sum_probs=34.7
Q ss_pred eEEEecCCcee-eee-CCCceEEEEEEcE---EEEEeCCCc-eeEEEc----CCc---EEEEcCCCE
Q 031109 96 ILRWGCPPSKF-PWT-YSDKETCYLLEGK---VKVYPDGSN-EGVEIG----AGD---LVVFPKGMS 149 (165)
Q Consensus 96 ~GiWe~~pg~f-~w~-y~~dE~~yVLEG~---vtVt~dgG~-e~v~i~----AGD---lv~fPkG~~ 149 (165)
+=.+--+++.+ .|| .+.||+-|...|. +.+-.++|. +.+.++ +|+ -+++|+|.-
T Consensus 55 aIYfLL~~~~~S~~HRv~sdEiW~~~~G~pL~l~~~~~dG~~~~~~LG~d~~~Ge~~pQ~vVP~G~W 121 (172)
T 3loi_A 55 MIYYLMQAGQPDPFHRVKSDETFVHNLGGSMKIHMIHPDGSYSCSILGNPLEHPEARHQVVVPRRVW 121 (172)
T ss_dssp EEEEEEETTCCEEEEECSSEEEEEEEEESCEEEEEECTTSCEEEEEESCTTTSTTCBSEEEECTTCE
T ss_pred EEEEEEcCCCCccCEEecCCEEEEEEcCCCEEEEEEcCCCceEEEEeCCCcccCCcceEEEECCCEE
Confidence 33454455554 466 6889999999994 444455552 234454 577 789999974
Done!