Your job contains 1 sequence.
>031115
MDLLVPPSSCCRKPPLHRQLTSSTYNNTRNPSSLKCRPRKTVSSELQTTAGVNGSYSPSI
PTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQ
PEALGISAELKSKGYALLCVGYPSSDVEVETQDEDEVKYKILANQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031115
(165 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2206644 - symbol:FdC2 "ferredoxin C 2" species... 356 1.4e-32 1
UNIPROTKB|P0A3C8 - symbol:petF "Ferredoxin-1" species:116... 190 5.4e-15 1
TAIR|locus:2038593 - symbol:FD3 "ferredoxin 3" species:37... 180 6.2e-14 1
UNIPROTKB|P0A3C9 - symbol:petF1 "Ferredoxin-1" species:19... 170 7.1e-13 1
UNIPROTKB|P00221 - symbol:PETF "Ferredoxin-1, chloroplast... 164 3.1e-12 1
TAIR|locus:2197349 - symbol:FD1 "ferredoxin 1" species:37... 162 5.0e-12 1
UNIPROTKB|P09911 - symbol:PETF "Ferredoxin-1, chloroplast... 157 1.7e-11 1
UNIPROTKB|P83522 - symbol:P83522 "Ferredoxin" species:451... 157 1.7e-11 1
UNIPROTKB|P83585 - symbol:P83585 "Ferredoxin" species:458... 154 3.5e-11 1
UNIPROTKB|P83583 - symbol:P83583 "Ferredoxin" species:230... 153 4.5e-11 1
UNIPROTKB|P68163 - symbol:P68163 "Ferredoxin" species:407... 151 7.4e-11 1
UNIPROTKB|P68164 - symbol:P68164 "Ferredoxin" species:356... 151 7.4e-11 1
GENEDB_PFALCIPARUM|MAL13P1.95 - symbol:MAL13P1.95 "ferred... 150 9.4e-11 1
UNIPROTKB|P83525 - symbol:P83525 "Ferredoxin" species:221... 150 9.4e-11 1
UNIPROTKB|Q8IED5 - symbol:MAL13P1.95 "Ferredoxin, putativ... 150 9.4e-11 1
TAIR|locus:2206061 - symbol:FED A species:3702 "Arabidops... 150 9.4e-11 1
UNIPROTKB|P83520 - symbol:P83520 "Ferredoxin" species:416... 149 1.2e-10 1
UNIPROTKB|P83526 - symbol:P83526 "Ferredoxin" species:409... 149 1.2e-10 1
UNIPROTKB|P83582 - symbol:P83582 "Ferredoxin" species:411... 149 1.2e-10 1
UNIPROTKB|P83523 - symbol:P83523 "Ferredoxin" species:112... 148 1.5e-10 1
UNIPROTKB|P83524 - symbol:P83524 "Ferredoxin" species:221... 146 2.5e-10 1
UNIPROTKB|P83584 - symbol:P83584 "Ferredoxin" species:227... 146 2.5e-10 1
UNIPROTKB|P83527 - symbol:P83527 "Ferredoxin" species:403... 145 3.2e-10 1
UNIPROTKB|P27320 - symbol:petF "Ferredoxin-1" species:111... 142 6.6e-10 1
TAIR|locus:2130424 - symbol:FdC1 "ferredoxin C 1" species... 125 4.2e-08 1
TIGR_CMR|SPO_2377 - symbol:SPO_2377 "ferredoxin" species:... 124 5.3e-08 1
TAIR|locus:2178153 - symbol:FD4 "ferredoxin 4" species:37... 122 8.7e-08 1
TIGR_CMR|CPS_0404 - symbol:CPS_0404 "oxidoreductase, NAD/... 128 1.2e-07 1
TIGR_CMR|SPO_0753 - symbol:SPO_0753 "phenylacetic acid de... 121 6.4e-07 1
UNIPROTKB|P76081 - symbol:paaE "ring 1,2-phenylacetyl-CoA... 120 8.2e-07 1
UNIPROTKB|Q9KL25 - symbol:VC_A0924 "Putative uncharacteri... 119 2.7e-06 1
TIGR_CMR|VC_A0924 - symbol:VC_A0924 "conserved hypothetic... 119 2.7e-06 1
TIGR_CMR|VC_0311 - symbol:VC_0311 "ferredoxin" species:68... 90 0.00021 1
UNIPROTKB|P75824 - symbol:hcr "NADH oxidoreductase" speci... 102 0.00088 1
>TAIR|locus:2206644 [details] [associations]
symbol:FdC2 "ferredoxin C 2" species:3702 "Arabidopsis
thaliana" [GO:0009055 "electron carrier activity"
evidence=IEA;ISS;IDA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0051537 "2 iron, 2
sulfur cluster binding" evidence=IEA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0009688 "abscisic acid
biosynthetic process" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
InterPro:IPR001041 Pfam:PF00111 PROSITE:PS51085 EMBL:CP002684
GO:GO:0009507 GO:GO:0009055 GO:GO:0046872 GO:GO:0051536
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292 KO:K02639
IPI:IPI00938789 RefSeq:NP_001154389.1 UniGene:At.20012
ProteinModelPortal:F4IE99 SMR:F4IE99 PRIDE:F4IE99
EnsemblPlants:AT1G32550.2 GeneID:840149 KEGG:ath:AT1G32550
OMA:YALELAM ArrayExpress:F4IE99 Uniprot:F4IE99
Length = 194
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 86/165 (52%), Positives = 110/165 (66%)
Query: 1 MDLLVPPSSCC--RKP--PLHRQLTSSTYNNTRNPSSLKCRPRKTVSSELQTTAGVNGSY 56
M L++P + C +K P++R+ + N R ++ C R V E+ T + GS
Sbjct: 1 MALILPCTFCTSLQKKNFPINRRYIT---NFRRGATTATCEFRIPV--EVSTPSD-RGSL 54
Query: 57 SPSIPTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSG 116
+P+HKVTVHDR RGVVHEF EDQYILH+AESQNI+LPFACRHGCCTSCAVR+KSG
Sbjct: 55 V--VPSHKVTVHDRQRGVVHEF---EDQYILHSAESQNISLPFACRHGCCTSCAVRVKSG 109
Query: 117 QIKQPEALGISAELKSK----------------GYALLCVGYPSS 145
+++QP+ALGISAELKS+ GYALLCVG+P+S
Sbjct: 110 ELRQPQALGISAELKSQRISSLDLIQCQKTYLTGYALLCVGFPTS 154
>UNIPROTKB|P0A3C8 [details] [associations]
symbol:petF "Ferredoxin-1" species:1168 "Nostoc sp. PCC
7119" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001041 InterPro:IPR006058 InterPro:IPR010241
Pfam:PF00111 PROSITE:PS00197 PROSITE:PS51085 GO:GO:0009055
GO:GO:0046872 GO:GO:0022900 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 PDB:1EWY PDBsum:1EWY PDB:1CZP
PDB:1QT9 PDBsum:1CZP PDBsum:1QT9 ProteinModelPortal:P0A3C8
SMR:P0A3C8 IntAct:P0A3C8 EvolutionaryTrace:P0A3C8
TIGRFAMs:TIGR02008 Uniprot:P0A3C8
Length = 99
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 36/84 (42%), Positives = 50/84 (59%)
Query: 62 THKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQP 121
T KVT+ + G HE VP+D+YIL AE Q LPF+CR G C++CA ++ SG + Q
Sbjct: 3 TFKVTLINEAEGTKHEIEVPDDEYILDAAEEQGYDLPFSCRAGACSTCAGKLVSGTVDQS 62
Query: 122 EALGISAELKSKGYALLCVGYPSS 145
+ + + GY L CV YP+S
Sbjct: 63 DQSFLDDDQIEAGYVLTCVAYPTS 86
>TAIR|locus:2038593 [details] [associations]
symbol:FD3 "ferredoxin 3" species:3702 "Arabidopsis
thaliana" [GO:0009055 "electron carrier activity" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0022900 "electron
transport chain" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster
binding" evidence=IEA] [GO:0009536 "plastid" evidence=IDA]
[GO:0009688 "abscisic acid biosynthetic process" evidence=RCA]
InterPro:IPR001041 InterPro:IPR006058 InterPro:IPR010241
Pfam:PF00111 PROSITE:PS00197 PROSITE:PS51085 GO:GO:0009507
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009055
GO:GO:0046872 GO:GO:0022900 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 eggNOG:COG0633 EMBL:AC006232
TIGRFAMs:TIGR02008 HOGENOM:HOG000217152 KO:K02639 EMBL:AY086622
EMBL:BT004187 EMBL:BT005393 IPI:IPI00548374 PIR:G84673
RefSeq:NP_180320.1 UniGene:At.38754 HSSP:P00248
ProteinModelPortal:Q9ZQG8 SMR:Q9ZQG8 STRING:Q9ZQG8 PaxDb:Q9ZQG8
PRIDE:Q9ZQG8 EnsemblPlants:AT2G27510.1 GeneID:817297
KEGG:ath:AT2G27510 TAIR:At2g27510 InParanoid:Q9ZQG8 OMA:HKETELF
PhylomeDB:Q9ZQG8 ProtClustDB:CLSN2913085 Genevestigator:Q9ZQG8
Uniprot:Q9ZQG8
Length = 155
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 46/138 (33%), Positives = 66/138 (47%)
Query: 8 SSCCRKPPLHRQLTSSTYNNTRNPSSLKCRPRKTVSSELQTTAGVNGSYSPSIPTHKVTV 67
S+ K L Q T+ N S+ R + S L+ +A G+ ++ K+
Sbjct: 8 STSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAVYKVKLLG 67
Query: 68 HDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGIS 127
D G EF V +DQYIL AE + LP++CR G C++CA +I SG + Q + +
Sbjct: 68 PD---GQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDGSFLE 124
Query: 128 AELKSKGYALLCVGYPSS 145
KGY L CV YP S
Sbjct: 125 DSHLEKGYVLTCVAYPQS 142
>UNIPROTKB|P0A3C9 [details] [associations]
symbol:petF1 "Ferredoxin-1" species:197221
"Thermosynechococcus elongatus BP-1" [GO:0005515 "protein binding"
evidence=IPI] [GO:0009055 "electron carrier activity" evidence=IDA]
InterPro:IPR001041 InterPro:IPR006058 InterPro:IPR010241
Pfam:PF00111 PROSITE:PS00197 PROSITE:PS51085 GO:GO:0009055
GO:GO:0046872 GO:GO:0022900 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 eggNOG:COG0633
TIGRFAMs:TIGR02008 HOGENOM:HOG000217152 KO:K02639 OMA:HKETELF
EMBL:BA000039 PIR:A00259 RefSeq:NP_681799.1 PDB:1ROE PDB:2CJN
PDB:2CJO PDBsum:1ROE PDBsum:2CJN PDBsum:2CJO
ProteinModelPortal:P0A3C9 SMR:P0A3C9 IntAct:P0A3C9
MINT:MINT-7014655 STRING:P0A3C9 GeneID:1011313
GenomeReviews:BA000039_GR KEGG:tel:tsl1009 PATRIC:23927318
EvolutionaryTrace:P0A3C9 Uniprot:P0A3C9
Length = 98
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 35/84 (41%), Positives = 50/84 (59%)
Query: 62 THKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQP 121
T+KVT+ R G VPED+YIL AE Q + LPF+CR G C++CA ++ G++ Q
Sbjct: 3 TYKVTLV-RPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQS 61
Query: 122 EALGISAELKSKGYALLCVGYPSS 145
+ + + KG+ L CV YP S
Sbjct: 62 DQSFLDDDQIEKGFVLTCVAYPRS 85
>UNIPROTKB|P00221 [details] [associations]
symbol:PETF "Ferredoxin-1, chloroplastic" species:3562
"Spinacia oleracea" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001041 InterPro:IPR006058 InterPro:IPR010241
Pfam:PF00111 PROSITE:PS00197 PROSITE:PS51085 GO:GO:0009507
GO:GO:0009055 GO:GO:0046872 GO:GO:0022900 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
TIGRFAMs:TIGR02008 EMBL:M35660 PIR:S00437 PDB:1A70 PDBsum:1A70
ProteinModelPortal:P00221 SMR:P00221 IntAct:P00221
EvolutionaryTrace:P00221 Uniprot:P00221
Length = 147
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 38/115 (33%), Positives = 57/115 (49%)
Query: 31 PSSLKCRPRKTVSSELQTTAGVNGSYSPSIPTHKVTVHDRFRGVVHEFLVPEDQYILHTA 90
P + P T S G G ++ +KVT+ V EF P+D YIL A
Sbjct: 22 PPMMAALPSNTGRSLFGLKTGSRGGRM-TMAAYKVTLVTPTGNV--EFQCPDDVYILDAA 78
Query: 91 ESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSS 145
E + I LP++CR G C+SCA ++K+G + Q + + + +G+ L C YP S
Sbjct: 79 EEEGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQIDEGWVLTCAAYPVS 133
>TAIR|locus:2197349 [details] [associations]
symbol:FD1 "ferredoxin 1" species:3702 "Arabidopsis
thaliana" [GO:0009055 "electron carrier activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0022900 "electron
transport chain" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster
binding" evidence=IEA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0080167 "response to karrikin" evidence=IEP]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA] [GO:0009688
"abscisic acid biosynthetic process" evidence=RCA]
InterPro:IPR001041 InterPro:IPR006058 InterPro:IPR010241
Pfam:PF00111 PROSITE:PS00197 PROSITE:PS51085 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 GO:GO:0009055 GO:GO:0046872
GO:GO:0080167 GO:GO:0022900 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 eggNOG:COG0633 EMBL:U95973
TIGRFAMs:TIGR02008 EMBL:AY058106 EMBL:AY127948 EMBL:AY086012
IPI:IPI00522921 PIR:E86243 RefSeq:NP_172565.1 UniGene:At.21590
UniGene:At.75115 ProteinModelPortal:O04090 SMR:O04090 IntAct:O04090
STRING:O04090 PaxDb:O04090 PRIDE:O04090 EnsemblPlants:AT1G10960.1
GeneID:837639 KEGG:ath:AT1G10960 TAIR:At1g10960
HOGENOM:HOG000217152 InParanoid:O04090 KO:K02639 OMA:HKEEAIM
PhylomeDB:O04090 ProtClustDB:PLN03136 Genevestigator:O04090
GermOnline:AT1G10960 Uniprot:O04090
Length = 148
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 42/128 (32%), Positives = 65/128 (50%)
Query: 20 LTSSTYNNTRNPSSLKCRPRKTVSS--ELQTTAGVNGSYSPSIPTHKVTVHDRFRGVVHE 77
+++S + P SL+ P S L+++ G + ++ T+KV G E
Sbjct: 11 VSTSFLRRQQTPISLRSLPFANTQSLFGLKSSTARGGRVT-AMATYKVKFITP-EGE-QE 67
Query: 78 FLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYAL 137
ED Y+L AE + LP++CR G C+SCA ++ SG I Q + + E S+GY L
Sbjct: 68 VECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVL 127
Query: 138 LCVGYPSS 145
CV YP+S
Sbjct: 128 TCVAYPTS 135
>UNIPROTKB|P09911 [details] [associations]
symbol:PETF "Ferredoxin-1, chloroplastic" species:3888
"Pisum sativum" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001041 InterPro:IPR006058 InterPro:IPR010241
Pfam:PF00111 PROSITE:PS00197 PROSITE:PS51085 GO:GO:0009507
GO:GO:0009055 GO:GO:0046872 GO:GO:0022900 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
TIGRFAMs:TIGR02008 EMBL:M31713 EMBL:M17107 PIR:S11495
ProteinModelPortal:P09911 SMR:P09911 DIP:DIP-384N IntAct:P09911
MINT:MINT-2584189 Uniprot:P09911
Length = 149
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 41/134 (30%), Positives = 66/134 (49%)
Query: 14 PPLHRQLTSSTYNNTRNPSSLKCRPRKTVSSELQ--TTAGVNGSYSPSIPTHKVTVHDRF 71
P L+ S+++ T+ P + K S+ T+ G + ++ ++KV +
Sbjct: 5 PALYGTAVSTSFLRTQ-PMPMSVTTTKAFSNGFLGLKTSLKRGDLAVAMASYKVKLVTP- 62
Query: 72 RGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELK 131
G EF P D YIL AE I LP++CR G C+SCA ++ G++ Q + + E
Sbjct: 63 DGT-QEFECPSDVYILDHAEEVGIDLPYSCRAGSCSSCAGKVVGGEVDQSDGSFLDDEQI 121
Query: 132 SKGYALLCVGYPSS 145
G+ L CV YP+S
Sbjct: 122 EAGFVLTCVAYPTS 135
>UNIPROTKB|P83522 [details] [associations]
symbol:P83522 "Ferredoxin" species:4513 "Hordeum vulgare"
[GO:0006124 "ferredoxin metabolic process" evidence=TAS]
[GO:0009055 "electron carrier activity" evidence=TAS]
InterPro:IPR001041 InterPro:IPR006058 InterPro:IPR010241
Pfam:PF00111 PROSITE:PS00197 PROSITE:PS51085 GO:GO:0009507
GO:GO:0009055 GO:GO:0046872 GO:GO:0022900 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
TIGRFAMs:TIGR02008 GO:GO:0006124 ProteinModelPortal:P83522
SMR:P83522 Gramene:P83522 Genevestigator:P83522 Uniprot:P83522
Length = 97
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 29/69 (42%), Positives = 42/69 (60%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
E VP+D YIL AE + I LP++CR G C+SCA ++ SG+I Q + + + +G+
Sbjct: 15 ELEVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKLVSGEIDQSDQSFLDDDQMEEGWV 74
Query: 137 LLCVGYPSS 145
L C YP S
Sbjct: 75 LTCAAYPKS 83
>UNIPROTKB|P83585 [details] [associations]
symbol:P83585 "Ferredoxin" species:45831 "Solanum
abutiloides" [GO:0006124 "ferredoxin metabolic process"
evidence=TAS] [GO:0008198 "ferrous iron binding" evidence=NAS]
[GO:0009055 "electron carrier activity" evidence=TAS] [GO:0009507
"chloroplast" evidence=TAS] InterPro:IPR001041 InterPro:IPR006058
InterPro:IPR010241 Pfam:PF00111 PROSITE:PS00197 PROSITE:PS51085
GO:GO:0009507 GO:GO:0008198 GO:GO:0009055 GO:GO:0022900
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
TIGRFAMs:TIGR02008 GO:GO:0006124 ProteinModelPortal:P83585
SMR:P83585 Uniprot:P83585
Length = 97
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 28/69 (40%), Positives = 42/69 (60%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
EF P+D+YIL AE + LP++CR G C+SCA +I +G + Q + + + + G+
Sbjct: 15 EFECPDDEYILDRAEEEGHDLPYSCRAGSCSSCAGKIAAGSVDQSDGNFLDDDQIADGFV 74
Query: 137 LLCVGYPSS 145
L CV YP S
Sbjct: 75 LTCVAYPQS 83
>UNIPROTKB|P83583 [details] [associations]
symbol:P83583 "Ferredoxin" species:230192 "Solanum lyratum"
[GO:0006124 "ferredoxin metabolic process" evidence=TAS]
[GO:0008198 "ferrous iron binding" evidence=NAS] [GO:0009055
"electron carrier activity" evidence=TAS] [GO:0009507 "chloroplast"
evidence=TAS] InterPro:IPR001041 InterPro:IPR006058
InterPro:IPR010241 Pfam:PF00111 PROSITE:PS00197 PROSITE:PS51085
GO:GO:0009507 GO:GO:0008198 GO:GO:0009055 GO:GO:0022900
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
TIGRFAMs:TIGR02008 GO:GO:0006124 ProteinModelPortal:P83583
SMR:P83583 Uniprot:P83583
Length = 97
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 28/69 (40%), Positives = 42/69 (60%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
EF P+D YIL +AE LP++CR G C+SCA +I +G + Q + + + ++G+
Sbjct: 15 EFNCPDDVYILDSAEENGHDLPYSCRAGACSSCAGKITAGNVDQSDNSFLDDDQVAEGFV 74
Query: 137 LLCVGYPSS 145
L CV YP S
Sbjct: 75 LTCVAYPKS 83
>UNIPROTKB|P68163 [details] [associations]
symbol:P68163 "Ferredoxin" species:4075 "Datura inoxia"
[GO:0006124 "ferredoxin metabolic process" evidence=TAS]
[GO:0008198 "ferrous iron binding" evidence=TAS] [GO:0009055
"electron carrier activity" evidence=TAS] [GO:0009507 "chloroplast"
evidence=TAS] InterPro:IPR001041 InterPro:IPR006058
InterPro:IPR010241 Pfam:PF00111 PROSITE:PS00197 PROSITE:PS51085
GO:GO:0009507 GO:GO:0008198 GO:GO:0009055 GO:GO:0022900
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
TIGRFAMs:TIGR02008 GO:GO:0006124 ProteinModelPortal:P68163
SMR:P68163 Uniprot:P68163
Length = 97
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
EF P+D YIL AE + LP++CR G C+SCA ++ +G + Q + + + ++G+
Sbjct: 15 EFDCPDDVYILDRAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMAEGFV 74
Query: 137 LLCVGYPSS 145
L CV YP S
Sbjct: 75 LTCVAYPQS 83
>UNIPROTKB|P68164 [details] [associations]
symbol:P68164 "Ferredoxin" species:35625 "Datura metel"
[GO:0006124 "ferredoxin metabolic process" evidence=TAS]
[GO:0008198 "ferrous iron binding" evidence=TAS] [GO:0009055
"electron carrier activity" evidence=TAS] [GO:0009507 "chloroplast"
evidence=TAS] InterPro:IPR001041 InterPro:IPR006058
InterPro:IPR010241 Pfam:PF00111 PROSITE:PS00197 PROSITE:PS51085
GO:GO:0009507 GO:GO:0008198 GO:GO:0009055 GO:GO:0022900
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
TIGRFAMs:TIGR02008 GO:GO:0006124 ProteinModelPortal:P68164
SMR:P68164 Uniprot:P68164
Length = 97
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
EF P+D YIL AE + LP++CR G C+SCA ++ +G + Q + + + ++G+
Sbjct: 15 EFDCPDDVYILDRAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMAEGFV 74
Query: 137 LLCVGYPSS 145
L CV YP S
Sbjct: 75 LTCVAYPQS 83
>GENEDB_PFALCIPARUM|MAL13P1.95 [details] [associations]
symbol:MAL13P1.95 "ferredoxin" species:5833
"Plasmodium falciparum" [GO:0020011 "apicoplast" evidence=IDA]
InterPro:IPR001041 InterPro:IPR006058 InterPro:IPR010241
Pfam:PF00111 PROSITE:PS00197 PROSITE:PS51085 GO:GO:0009055
GO:GO:0046872 GO:GO:0022900 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 EMBL:AL844509 GO:GO:0020011
TIGRFAMs:TIGR02008 HOGENOM:HOG000217152 KO:K02639
RefSeq:XP_001349917.1 PDB:1IUE PDBsum:1IUE
ProteinModelPortal:Q8IED5 SMR:Q8IED5 MINT:MINT-7043924
EnsemblProtists:MAL13P1.95:mRNA GeneID:813986 KEGG:pfa:MAL13P1.95
EuPathDB:PlasmoDB:PF3D7_1318100 ProtClustDB:PTZ00038
EvolutionaryTrace:Q8IED5 Uniprot:Q8IED5
Length = 194
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 82 EDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVG 141
ED+YIL +E QN+ LP++CR G C++CA ++ G++ + + E K Y LLC
Sbjct: 116 EDEYILDASERQNVELPYSCRGGSCSTCAAKLVEGEVDNDDQSYLDEEQIKKKYILLCTC 175
Query: 142 YPSS 145
YP S
Sbjct: 176 YPKS 179
>UNIPROTKB|P83525 [details] [associations]
symbol:P83525 "Ferredoxin" species:221162 "Scopolia
japonica" [GO:0006124 "ferredoxin metabolic process" evidence=TAS]
[GO:0008198 "ferrous iron binding" evidence=TAS] [GO:0009055
"electron carrier activity" evidence=TAS] [GO:0009507 "chloroplast"
evidence=TAS] InterPro:IPR001041 InterPro:IPR006058
InterPro:IPR010241 Pfam:PF00111 PROSITE:PS00197 PROSITE:PS51085
GO:GO:0009507 GO:GO:0008198 GO:GO:0009055 GO:GO:0022900
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
TIGRFAMs:TIGR02008 GO:GO:0006124 ProteinModelPortal:P83525
SMR:P83525 Uniprot:P83525
Length = 97
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
EF P+D YIL AE + LP++CR G C+SCA ++ +G + Q + + + + G+
Sbjct: 15 EFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQMADGFV 74
Query: 137 LLCVGYPSS 145
L CV YP S
Sbjct: 75 LTCVAYPQS 83
>UNIPROTKB|Q8IED5 [details] [associations]
symbol:MAL13P1.95 "Ferredoxin, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=IDA]
InterPro:IPR001041 InterPro:IPR006058 InterPro:IPR010241
Pfam:PF00111 PROSITE:PS00197 PROSITE:PS51085 GO:GO:0009055
GO:GO:0046872 GO:GO:0022900 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 EMBL:AL844509 GO:GO:0020011
TIGRFAMs:TIGR02008 HOGENOM:HOG000217152 KO:K02639
RefSeq:XP_001349917.1 PDB:1IUE PDBsum:1IUE
ProteinModelPortal:Q8IED5 SMR:Q8IED5 MINT:MINT-7043924
EnsemblProtists:MAL13P1.95:mRNA GeneID:813986 KEGG:pfa:MAL13P1.95
EuPathDB:PlasmoDB:PF3D7_1318100 ProtClustDB:PTZ00038
EvolutionaryTrace:Q8IED5 Uniprot:Q8IED5
Length = 194
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 82 EDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVG 141
ED+YIL +E QN+ LP++CR G C++CA ++ G++ + + E K Y LLC
Sbjct: 116 EDEYILDASERQNVELPYSCRGGSCSTCAAKLVEGEVDNDDQSYLDEEQIKKKYILLCTC 175
Query: 142 YPSS 145
YP S
Sbjct: 176 YPKS 179
>TAIR|locus:2206061 [details] [associations]
symbol:FED A species:3702 "Arabidopsis thaliana"
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0022900 "electron transport
chain" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=IEA] [GO:0009767 "photosynthetic electron transport chain"
evidence=IMP;TAS] [GO:0009416 "response to light stimulus"
evidence=IEP] [GO:0009570 "chloroplast stroma" evidence=TAS]
[GO:0009637 "response to blue light" evidence=RCA] [GO:0009644
"response to high light intensity" evidence=RCA] [GO:0009744
"response to sucrose stimulus" evidence=RCA] [GO:0009773
"photosynthetic electron transport in photosystem I" evidence=RCA]
[GO:0010114 "response to red light" evidence=RCA] [GO:0010155
"regulation of proton transport" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0010218 "response to
far red light" evidence=RCA] [GO:0042742 "defense response to
bacterium" evidence=RCA] InterPro:IPR001041 InterPro:IPR006058
InterPro:IPR010241 Pfam:PF00111 PROSITE:PS00197 PROSITE:PS51085
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0009055
GO:GO:0046872 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 eggNOG:COG0633 EMBL:AC018908 GO:GO:0009767
TIGRFAMs:TIGR02008 HOGENOM:HOG000217152 KO:K02639
ProtClustDB:PLN03136 EMBL:X51370 EMBL:M35868 EMBL:AF324706
EMBL:AF326885 EMBL:AF339705 EMBL:AY093034 EMBL:AY128936
EMBL:AK226379 IPI:IPI00540057 PIR:S09979 RefSeq:NP_176291.1
UniGene:At.47579 ProteinModelPortal:P16972 SMR:P16972 IntAct:P16972
STRING:P16972 PaxDb:P16972 PRIDE:P16972 EnsemblPlants:AT1G60950.1
GeneID:842386 KEGG:ath:AT1G60950 TAIR:At1g60950 InParanoid:P16972
OMA:TSFIRRS PhylomeDB:P16972 Genevestigator:P16972
GermOnline:AT1G60950 Uniprot:P16972
Length = 148
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 37/116 (31%), Positives = 56/116 (48%)
Query: 31 PSSLKCRPRKTVSSELQTTAGV-NGSYSPSIPTHKVTVHDRFRGVVHEFLVPEDQYILHT 89
P SL+ P S +G G ++ T+KV G + E +D Y+L
Sbjct: 22 PISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFITP-EGEL-EVECDDDVYVLDA 79
Query: 90 AESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSS 145
AE I LP++CR G C+SCA ++ SG + Q + + E +G+ L C YP+S
Sbjct: 80 AEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQIGEGFVLTCAAYPTS 135
>UNIPROTKB|P83520 [details] [associations]
symbol:P83520 "Ferredoxin" species:41689 "Brugmansia
arborea" [GO:0006124 "ferredoxin metabolic process" evidence=TAS]
[GO:0008198 "ferrous iron binding" evidence=TAS] [GO:0009055
"electron carrier activity" evidence=TAS] [GO:0009507 "chloroplast"
evidence=TAS] InterPro:IPR001041 InterPro:IPR006058
InterPro:IPR010241 Pfam:PF00111 PROSITE:PS00197 PROSITE:PS51085
GO:GO:0009507 GO:GO:0008198 GO:GO:0009055 GO:GO:0022900
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
TIGRFAMs:TIGR02008 GO:GO:0006124 ProteinModelPortal:P83520
SMR:P83520 Uniprot:P83520
Length = 97
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
EF P+D YIL AE + LP++CR G C+SCA ++ +G + Q + + + + G+
Sbjct: 15 EFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQMADGFV 74
Query: 137 LLCVGYPSS 145
L CV YP S
Sbjct: 75 LTCVAYPQS 83
>UNIPROTKB|P83526 [details] [associations]
symbol:P83526 "Ferredoxin" species:4097 "Nicotiana tabacum"
[GO:0006124 "ferredoxin metabolic process" evidence=TAS]
[GO:0008198 "ferrous iron binding" evidence=TAS] [GO:0009055
"electron carrier activity" evidence=TAS] [GO:0009507 "chloroplast"
evidence=TAS] InterPro:IPR001041 InterPro:IPR006058
InterPro:IPR010241 Pfam:PF00111 PROSITE:PS00197 PROSITE:PS51085
GO:GO:0009507 GO:GO:0008198 GO:GO:0009055 GO:GO:0022900
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
TIGRFAMs:TIGR02008 GO:GO:0006124 ProteinModelPortal:P83526
SMR:P83526 Uniprot:P83526
Length = 97
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 29/73 (39%), Positives = 42/73 (57%)
Query: 73 GVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKS 132
G V EF P+D YIL AE LP++CR G C+SCA ++ +G + Q + + + +
Sbjct: 12 GAV-EFDCPDDVYILDQAEEMGHDLPYSCRAGSCSSCAGKVTAGNVDQSDGNFLDDDQMA 70
Query: 133 KGYALLCVGYPSS 145
G+ L CV YP S
Sbjct: 71 DGFVLTCVAYPQS 83
>UNIPROTKB|P83582 [details] [associations]
symbol:P83582 "Ferredoxin" species:4112 "Solanum nigrum"
[GO:0006124 "ferredoxin metabolic process" evidence=TAS]
[GO:0008198 "ferrous iron binding" evidence=NAS] [GO:0009055
"electron carrier activity" evidence=TAS] [GO:0009507 "chloroplast"
evidence=TAS] InterPro:IPR001041 InterPro:IPR006058
InterPro:IPR010241 Pfam:PF00111 PROSITE:PS00197 PROSITE:PS51085
GO:GO:0009507 GO:GO:0008198 GO:GO:0009055 GO:GO:0022900
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
TIGRFAMs:TIGR02008 GO:GO:0006124 ProteinModelPortal:P83582
SMR:P83582 Uniprot:P83582
Length = 97
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
EF P+D YIL AE + LP++CR G C+SCA ++ +G + Q + + + + G+
Sbjct: 15 EFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQMADGFV 74
Query: 137 LLCVGYPSS 145
L CV YP S
Sbjct: 75 LTCVAYPKS 83
>UNIPROTKB|P83523 [details] [associations]
symbol:P83523 "Ferredoxin" species:112883 "Lycium chinense"
[GO:0006124 "ferredoxin metabolic process" evidence=TAS]
[GO:0008198 "ferrous iron binding" evidence=TAS] [GO:0009055
"electron carrier activity" evidence=TAS] [GO:0009507 "chloroplast"
evidence=TAS] InterPro:IPR001041 InterPro:IPR006058
InterPro:IPR010241 Pfam:PF00111 PROSITE:PS00197 PROSITE:PS51085
GO:GO:0009507 GO:GO:0008198 GO:GO:0009055 GO:GO:0022900
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
TIGRFAMs:TIGR02008 GO:GO:0006124 ProteinModelPortal:P83523
SMR:P83523 Uniprot:P83523
Length = 97
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
EF P+D YIL AE + LP++CR G C+SCA ++ +G + Q + + + + G+
Sbjct: 15 EFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQIADGFV 74
Query: 137 LLCVGYPSS 145
L CV YP S
Sbjct: 75 LTCVAYPQS 83
>UNIPROTKB|P83524 [details] [associations]
symbol:P83524 "Ferredoxin" species:221454 "Physalis
alkekengi var. franchetii" [GO:0006124 "ferredoxin metabolic
process" evidence=TAS] [GO:0008198 "ferrous iron binding"
evidence=TAS] [GO:0009055 "electron carrier activity" evidence=TAS]
[GO:0009507 "chloroplast" evidence=TAS] InterPro:IPR001041
InterPro:IPR006058 InterPro:IPR010241 Pfam:PF00111 PROSITE:PS00197
PROSITE:PS51085 GO:GO:0009507 GO:GO:0008198 GO:GO:0009055
GO:GO:0022900 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 TIGRFAMs:TIGR02008 GO:GO:0006124
ProteinModelPortal:P83524 SMR:P83524 Uniprot:P83524
Length = 97
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 78 FLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYAL 137
F P+++YIL AE Q LP++CR G C+SCA ++ +G + Q + + + + G+ L
Sbjct: 16 FDCPDNEYILDAAEEQGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQVADGFVL 75
Query: 138 LCVGYPSS 145
CV YP S
Sbjct: 76 TCVAYPQS 83
>UNIPROTKB|P83584 [details] [associations]
symbol:P83584 "Ferredoxin" species:227722 "Solanum
lasiocarpum" [GO:0006124 "ferredoxin metabolic process"
evidence=TAS] [GO:0008198 "ferrous iron binding" evidence=NAS]
[GO:0009055 "electron carrier activity" evidence=TAS] [GO:0009507
"chloroplast" evidence=TAS] InterPro:IPR001041 InterPro:IPR006058
InterPro:IPR010241 Pfam:PF00111 PROSITE:PS00197 PROSITE:PS51085
GO:GO:0009507 GO:GO:0008198 GO:GO:0009055 GO:GO:0022900
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
TIGRFAMs:TIGR02008 GO:GO:0006124 ProteinModelPortal:P83584
SMR:P83584 Uniprot:P83584
Length = 97
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 28/69 (40%), Positives = 39/69 (56%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
EF P+D YIL AE + LP++CR G C+SCA +I G + Q + + + G+
Sbjct: 15 EFNCPDDVYILDRAEEEGHDLPYSCRAGACSSCAGKIVDGSVDQSDNSFLDDDQIGGGFV 74
Query: 137 LLCVGYPSS 145
L CV YP S
Sbjct: 75 LTCVAYPKS 83
>UNIPROTKB|P83527 [details] [associations]
symbol:P83527 "Ferredoxin" species:40321 "Capsicum annuum
var. annuum" [GO:0005737 "cytoplasm" evidence=NAS]
InterPro:IPR001041 InterPro:IPR006058 InterPro:IPR010241
Pfam:PF00111 PROSITE:PS00197 PROSITE:PS51085 GO:GO:0009507
GO:GO:0008198 GO:GO:0009055 GO:GO:0022900 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
TIGRFAMs:TIGR02008 ProteinModelPortal:P83527 SMR:P83527
GO:GO:0006124 Uniprot:P83527
Length = 97
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 28/69 (40%), Positives = 39/69 (56%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
EF P+D YIL AE LP++CR G C+SCA +I G + Q + + + +G+
Sbjct: 15 EFDCPDDVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWV 74
Query: 137 LLCVGYPSS 145
L CV YP S
Sbjct: 75 LTCVAYPQS 83
>UNIPROTKB|P27320 [details] [associations]
symbol:petF "Ferredoxin-1" species:1111708 "Synechocystis
sp. PCC 6803 substr. Kazusa" [GO:0005515 "protein binding"
evidence=IPI] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=IDA] InterPro:IPR001041 InterPro:IPR006058
InterPro:IPR010241 Pfam:PF00111 PROSITE:PS00197 PROSITE:PS51085
GO:GO:0009055 GO:GO:0046872 GO:GO:0022900 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292 eggNOG:COG0633
EMBL:BA000022 GenomeReviews:BA000022_GR TIGRFAMs:TIGR02008
HOGENOM:HOG000217152 KO:K02639 OMA:HKETELF EMBL:D85607 EMBL:U38802
PIR:S76345 RefSeq:NP_442127.1 RefSeq:YP_005652185.1 PDB:1DOX
PDB:1DOY PDB:1OFF PDB:2KAJ PDB:2PVG PDB:2PVO PDBsum:1DOX
PDBsum:1DOY PDBsum:1OFF PDBsum:2KAJ PDBsum:2PVG PDBsum:2PVO
ProteinModelPortal:P27320 SMR:P27320 IntAct:P27320
MINT:MINT-3974388 STRING:P27320 GeneID:12253402 GeneID:952540
KEGG:syn:ssl0020 KEGG:syy:SYNGTS_2232 PATRIC:23841858
EvolutionaryTrace:P27320 Uniprot:P27320
Length = 97
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 82 EDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVG 141
+D YIL AE + LP++CR G C++CA +I +G + Q + + + GY L CV
Sbjct: 21 DDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQIEAGYVLTCVA 80
Query: 142 YPSS 145
YP+S
Sbjct: 81 YPTS 84
>TAIR|locus:2130424 [details] [associations]
symbol:FdC1 "ferredoxin C 1" species:3702 "Arabidopsis
thaliana" [GO:0009055 "electron carrier activity" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0022900 "electron
transport chain" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster
binding" evidence=IEA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0015995 "chlorophyll biosynthetic process" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001041 InterPro:IPR010241 Pfam:PF00111 PROSITE:PS51085
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009055
GO:GO:0046872 GO:GO:0022900 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 eggNOG:COG0633 EMBL:AL161540
EMBL:Z97337 TIGRFAMs:TIGR02008 HOGENOM:HOG000217152 KO:K02639
EMBL:AY058112 EMBL:AY101536 IPI:IPI00527319 PIR:B71412
RefSeq:NP_193225.1 UniGene:At.4306 HSSP:P06543
ProteinModelPortal:O23344 SMR:O23344 STRING:O23344 PaxDb:O23344
PRIDE:O23344 ProMEX:O23344 EnsemblPlants:AT4G14890.1 GeneID:827146
KEGG:ath:AT4G14890 TAIR:At4g14890 InParanoid:O23344 OMA:YPRSNLK
PhylomeDB:O23344 ProtClustDB:CLSN2915813 Genevestigator:O23344
Uniprot:O23344
Length = 154
Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 28/84 (33%), Positives = 44/84 (52%)
Query: 63 HKVTV-HDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQP 121
+KV V HD G E V D+ IL A + +P+ C G C +C ++ +G + Q
Sbjct: 53 YKVVVEHD---GKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTGTVDQS 109
Query: 122 EALGISAELKSKGYALLCVGYPSS 145
+ +S ++ +GY LLC YP+S
Sbjct: 110 GGM-LSDDVVERGYTLLCASYPTS 132
>TIGR_CMR|SPO_2377 [details] [associations]
symbol:SPO_2377 "ferredoxin" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0009055 "electron carrier activity"
evidence=ISS] InterPro:IPR001041 Pfam:PF00111 PROSITE:PS51085
GO:GO:0009055 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046872
GO:GO:0051536 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
HOGENOM:HOG000217152 RefSeq:YP_167598.1 ProteinModelPortal:Q5LQV7
GeneID:3193359 KEGG:sil:SPO2377 PATRIC:23378131 OMA:CGTCTGR
ProtClustDB:CLSK759209 Uniprot:Q5LQV7
Length = 132
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 25/84 (29%), Positives = 44/84 (52%)
Query: 62 THKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQP 121
TH VT+ +R G F V + +L Q + LP+ C +G C +CA ++ +G++ Q
Sbjct: 3 THTVTIANR-EGA--SFQVNARRPLLEQLRDQGVDLPYGCEYGGCITCAAKLTAGEVDQR 59
Query: 122 EALGISAELKSKGYALLCVGYPSS 145
+ ++ + GY +LCV +S
Sbjct: 60 RQVALNNRQIANGYVILCVARATS 83
>TAIR|locus:2178153 [details] [associations]
symbol:FD4 "ferredoxin 4" species:3702 "Arabidopsis
thaliana" [GO:0009055 "electron carrier activity" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0022900 "electron
transport chain" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster
binding" evidence=IEA] InterPro:IPR001041 InterPro:IPR006058
InterPro:IPR010241 Pfam:PF00111 PROSITE:PS00197 PROSITE:PS51085
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0009055
GO:GO:0046872 EMBL:AB016893 GO:GO:0022900 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292 eggNOG:COG0633
TIGRFAMs:TIGR02008 HOGENOM:HOG000217152 KO:K02639 IPI:IPI00525744
RefSeq:NP_196562.1 UniGene:At.54795 HSSP:P27320
ProteinModelPortal:Q9FIA7 SMR:Q9FIA7 EnsemblPlants:AT5G10000.1
GeneID:830862 KEGG:ath:AT5G10000 TAIR:At5g10000 InParanoid:Q9FIA7
PhylomeDB:Q9FIA7 Genevestigator:Q9FIA7 Uniprot:Q9FIA7
Length = 148
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 82 EDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVG 141
ED IL +AE+ + LP++CR G C +C ++ SG++ Q + E KGY L C+
Sbjct: 72 EDCCILESAENAGLELPYSCRSGTCGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIA 131
Query: 142 YP 143
P
Sbjct: 132 LP 133
>TIGR_CMR|CPS_0404 [details] [associations]
symbol:CPS_0404 "oxidoreductase, NAD/FAD/2Fe-2S
iron-sulfur cluster binding protein" species:167879 "Colwellia
psychrerythraea 34H" [GO:0008152 "metabolic process" evidence=ISS]
[GO:0016491 "oxidoreductase activity" evidence=ISS]
InterPro:IPR001041 InterPro:IPR001221 InterPro:IPR001433
InterPro:IPR006058 InterPro:IPR017927 InterPro:IPR017938
Pfam:PF00111 Pfam:PF00175 PRINTS:PR00410 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51384 Pfam:PF00970 GO:GO:0009055
GO:GO:0046872 GO:GO:0016491 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
InterPro:IPR008333 SUPFAM:SSF63380 eggNOG:COG1018
RefSeq:YP_267162.1 ProteinModelPortal:Q489V2 STRING:Q489V2
GeneID:3519228 KEGG:cps:CPS_0404 PATRIC:21464171 OMA:INTEEST
BioCyc:CPSY167879:GI48-499-MONOMER Uniprot:Q489V2
Length = 373
Score = 128 (50.1 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 86 ILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLC 139
+L E+ + LP++CR G C SC ++ SGQ+KQ G+SA + +GY LLC
Sbjct: 307 LLDQGETAGLILPYSCRAGSCGSCKAKLISGQVKQNSTDGLSAREQQQGYILLC 360
>TIGR_CMR|SPO_0753 [details] [associations]
symbol:SPO_0753 "phenylacetic acid degradation
oxidoreductase PaaK" species:246200 "Ruegeria pomeroyi DSS-3"
[GO:0009055 "electron carrier activity" evidence=ISS] [GO:0010124
"phenylacetate catabolic process" evidence=ISS] [GO:0016651
"oxidoreductase activity, acting on NAD(P)H" evidence=ISS]
InterPro:IPR001041 InterPro:IPR001433 InterPro:IPR001709
InterPro:IPR001834 InterPro:IPR006058 InterPro:IPR011884
InterPro:IPR017927 InterPro:IPR017938 Pfam:PF00111 Pfam:PF00175
PRINTS:PR00371 PRINTS:PR00406 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51384 Pfam:PF00970 GO:GO:0009055 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0006810 GO:GO:0016491
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
InterPro:IPR008333 SUPFAM:SSF63380 HOGENOM:HOG000141049
GO:GO:0010124 KO:K02613 TIGRFAMs:TIGR02160 RefSeq:YP_166006.1
ProteinModelPortal:Q5LVE9 GeneID:3195933 KEGG:sil:SPO0753
PATRIC:23374781 OMA:CKAGVCS ProtClustDB:CLSK892349 Uniprot:Q5LVE9
Length = 357
Score = 121 (47.7 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 73 GVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKS 132
G F +P+D IL A ++ PFAC+ G C++C R+ G+++ +
Sbjct: 276 GATQSFDMPKDLSILDAALQNSLDAPFACKAGVCSTCRCRVLEGEVEMVANHALEDYEVE 335
Query: 133 KGYALLCVGYP 143
KGY L C YP
Sbjct: 336 KGYVLSCQAYP 346
>UNIPROTKB|P76081 [details] [associations]
symbol:paaE "ring 1,2-phenylacetyl-CoA epoxidase, reductase
subunit" species:83333 "Escherichia coli K-12" [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0010124
"phenylacetate catabolic process" evidence=IEA;IMP] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IDA] [GO:0022900
"electron transport chain" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0051537 "2 iron, 2
sulfur cluster binding" evidence=IEA;IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] InterPro:IPR001041 InterPro:IPR001221
InterPro:IPR001433 InterPro:IPR001709 InterPro:IPR006058
InterPro:IPR011884 InterPro:IPR017927 InterPro:IPR017938
Pfam:PF00111 Pfam:PF00175 PRINTS:PR00371 PRINTS:PR00410
PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51384 UniPathway:UPA00930
Pfam:PF00970 GO:GO:0009055 GO:GO:0050660 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
GO:GO:0016491 GO:GO:0022900 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 InterPro:IPR008333
SUPFAM:SSF63380 EMBL:X97452 eggNOG:COG1018 HOGENOM:HOG000141049
GO:GO:0010124 PIR:C64890 RefSeq:NP_415910.1 RefSeq:YP_489661.1
ProteinModelPortal:P76081 SMR:P76081 IntAct:P76081
EnsemblBacteria:EBESCT00000000388 EnsemblBacteria:EBESCT00000015883
GeneID:12931184 GeneID:945962 KEGG:ecj:Y75_p1369 KEGG:eco:b1392
PATRIC:32118070 EchoBASE:EB3502 EcoGene:EG13739 KO:K02613
OMA:DHVFICG ProtClustDB:CLSK891747 BioCyc:EcoCyc:G6713-MONOMER
BioCyc:ECOL316407:JW1387-MONOMER BioCyc:MetaCyc:G6713-MONOMER
Genevestigator:P76081 TIGRFAMs:TIGR02160 Uniprot:P76081
Length = 356
Score = 120 (47.3 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 33/110 (30%), Positives = 50/110 (45%)
Query: 38 PRKTVSSELQTTAGVNGSYSPSIPT--HKVTVHD--RFRGVVHEFLVPEDQYILHTAESQ 93
P KT+ E T G S ++ + KVTV R R +V L +D+ IL A Q
Sbjct: 235 PDKTIHLERFNTPGTRVKRSVNVQSDGQKVTVRQDGRDREIV---LNADDESILDAALRQ 291
Query: 94 NITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYP 143
LP+AC+ G C +C ++ G++ + + + GY L C P
Sbjct: 292 GADLPYACKGGVCATCKCKVLRGKVAMETNYSLEPDELAAGYVLSCQALP 341
>UNIPROTKB|Q9KL25 [details] [associations]
symbol:VC_A0924 "Putative uncharacterized protein"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001041 InterPro:IPR001433
InterPro:IPR001834 InterPro:IPR005302 InterPro:IPR006058
InterPro:IPR017927 InterPro:IPR017938 Pfam:PF00111 Pfam:PF00175
Pfam:PF03473 PRINTS:PR00406 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51340 PROSITE:PS51384 Pfam:PF00970 GO:GO:0030170
GO:GO:0009055 GO:GO:0006810 GO:GO:0016491 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 GO:GO:0030151 InterPro:IPR008333
SUPFAM:SSF63380 HSSP:P00235 InterPro:IPR011037 SUPFAM:SSF50800
InterPro:IPR005303 Pfam:PF03476 KO:K07140 OMA:RYAISVK PIR:H82401
RefSeq:NP_233309.1 ProteinModelPortal:Q9KL25 DNASU:2612897
GeneID:2612897 KEGG:vch:VCA0924 PATRIC:20086380
ProtClustDB:CLSK869826 Uniprot:Q9KL25
Length = 662
Score = 119 (46.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 61 PTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQ 120
P K V F G+ + + +L AE + +P +CR G C +C V++KSG ++Q
Sbjct: 574 PREKKAVTLSFNGI--QVSADNQKTLLEHAEDAGVRIPNSCRAGICGACKVKVKSGLVEQ 631
Query: 121 PEALGISAELKSKGYALLC 139
P+ + +S G AL C
Sbjct: 632 PKVPALMDHERSMGMALAC 650
>TIGR_CMR|VC_A0924 [details] [associations]
symbol:VC_A0924 "conserved hypothetical protein"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001041 InterPro:IPR001433 InterPro:IPR001834
InterPro:IPR005302 InterPro:IPR006058 InterPro:IPR017927
InterPro:IPR017938 Pfam:PF00111 Pfam:PF00175 Pfam:PF03473
PRINTS:PR00406 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51340
PROSITE:PS51384 Pfam:PF00970 GO:GO:0030170 GO:GO:0009055
GO:GO:0006810 GO:GO:0016491 EMBL:AE003853 GenomeReviews:AE003853_GR
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
GO:GO:0030151 InterPro:IPR008333 SUPFAM:SSF63380 HSSP:P00235
InterPro:IPR011037 SUPFAM:SSF50800 InterPro:IPR005303 Pfam:PF03476
KO:K07140 OMA:RYAISVK PIR:H82401 RefSeq:NP_233309.1
ProteinModelPortal:Q9KL25 DNASU:2612897 GeneID:2612897
KEGG:vch:VCA0924 PATRIC:20086380 ProtClustDB:CLSK869826
Uniprot:Q9KL25
Length = 662
Score = 119 (46.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 61 PTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQ 120
P K V F G+ + + +L AE + +P +CR G C +C V++KSG ++Q
Sbjct: 574 PREKKAVTLSFNGI--QVSADNQKTLLEHAEDAGVRIPNSCRAGICGACKVKVKSGLVEQ 631
Query: 121 PEALGISAELKSKGYALLC 139
P+ + +S G AL C
Sbjct: 632 PKVPALMDHERSMGMALAC 650
>TIGR_CMR|VC_0311 [details] [associations]
symbol:VC_0311 "ferredoxin" species:686 "Vibrio cholerae O1
biovar El Tor" [GO:0009055 "electron carrier activity"
evidence=ISS] InterPro:IPR001041 InterPro:IPR006058 Pfam:PF00111
PROSITE:PS00197 PROSITE:PS51085 GO:GO:0009055 GO:GO:0046872
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292 HSSP:P07771
PIR:H82338 RefSeq:NP_229965.1 ProteinModelPortal:Q9KV47
DNASU:2614980 GeneID:2614980 KEGG:vch:VC0311 PATRIC:20079665
OMA:TIRYRIE ProtClustDB:CLSK873933 Uniprot:Q9KV47
Length = 89
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 79 LVPED-QYILHTAES-------QNITLPFACRHGCCTSCAVRIKSGQIK-QPEALGISAE 129
+VP D Q+I+H+ E+ Q I P CR G C +C ++ G+++ + E L ++ +
Sbjct: 7 IVPNDRQFIIHSGETVLDAALNQQIAFPHRCRIGACAACLCKLVEGEVEYELEPL-LTEQ 65
Query: 130 LKSKGYALLC 139
K+ G+ C
Sbjct: 66 EKATGWIFAC 75
>UNIPROTKB|P75824 [details] [associations]
symbol:hcr "NADH oxidoreductase" species:83333 "Escherichia
coli K-12" [GO:0009055 "electron carrier activity" evidence=IEA]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0051537 "2 iron, 2
sulfur cluster binding" evidence=IEA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR000951 InterPro:IPR001041 InterPro:IPR001433
InterPro:IPR017927 InterPro:IPR017938 Pfam:PF00111 Pfam:PF00175
PRINTS:PR00409 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51384
Pfam:PF00970 GO:GO:0009055 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
GO:GO:0016491 GO:GO:0022900 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 InterPro:IPR008333
SUPFAM:SSF63380 eggNOG:COG1018 PIR:H64825 RefSeq:NP_415393.1
RefSeq:YP_489145.1 ProteinModelPortal:P75824 SMR:P75824
EnsemblBacteria:EBESCT00000001471 EnsemblBacteria:EBESCT00000001472
EnsemblBacteria:EBESCT00000017558 GeneID:12933103 GeneID:947660
KEGG:ecj:Y75_p0845 KEGG:eco:b0872 PATRIC:32116951 EchoBASE:EB3455
EcoGene:EG13691 HOGENOM:HOG000141050 KO:K11933 OMA:SCHPQSD
ProtClustDB:PRK10684 BioCyc:EcoCyc:G6456-MONOMER
BioCyc:ECOL316407:JW5117-MONOMER BioCyc:MetaCyc:G6456-MONOMER
Genevestigator:P75824 Uniprot:P75824
Length = 322
Score = 102 (41.0 bits), Expect = 0.00088, P = 0.00088
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGIS-AELKSKGY 135
EF P +L ES N+ + ACR G C C ++ SG+ + ++ AE+ ++GY
Sbjct: 249 EFYAPVGTTLLEALESNNVPVVAACRAGVCGCCKTKVVSGEYTVSSTMTLTDAEI-AEGY 307
Query: 136 ALLCVGYP 143
L C +P
Sbjct: 308 VLACSCHP 315
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.131 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 165 153 0.00081 105 3 11 22 0.49 31
30 0.41 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 556 (59 KB)
Total size of DFA: 139 KB (2087 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.67u 0.22s 17.89t Elapsed: 00:00:01
Total cpu time: 17.67u 0.22s 17.89t Elapsed: 00:00:01
Start: Fri May 10 11:35:10 2013 End: Fri May 10 11:35:11 2013