BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031115
(165 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P08451|FER2_SYNP6 Ferredoxin-2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 /
SAUG 1402/1) GN=petF2 PE=3 SV=2
Length = 105
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 60 IPTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIK 119
+ T++V V ++G F DQ +L +A++ + LP +C G CT+CA RI SG++
Sbjct: 1 MATYQVEV--IYQGQSQTFTADSDQSVLDSAQAAGVDLPASCLTGVCTTCAARILSGEVD 58
Query: 120 QPEALGISAELKSKGYALLCVGYPSSDVEVETQDEDEV 157
QP+A+G+ E +GY LLCV YP SD+++ET EDE+
Sbjct: 59 QPDAMGVGPEPAKQGYTLLCVAYPRSDLKIETHKEDEL 96
>sp|P0A3C7|FER1_NOSS1 Ferredoxin-1 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=petF
PE=1 SV=2
Length = 99
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 60/98 (61%)
Query: 60 IPTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIK 119
+ T KVT+ + G HE VP+D+YIL AE Q LPF+CR G C++CA ++ SG +
Sbjct: 1 MATFKVTLINEAEGTKHEIEVPDDEYILDAAEEQGYDLPFSCRAGACSTCAGKLVSGTVD 60
Query: 120 QPEALGISAELKSKGYALLCVGYPSSDVEVETQDEDEV 157
Q + + + GY L CV YP+SDV ++T E+++
Sbjct: 61 QSDQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEEDL 98
>sp|P0A3C8|FER1_ANASO Ferredoxin-1 OS=Anabaena sp. (strain PCC 7119) GN=petF PE=1 SV=2
Length = 99
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 60/98 (61%)
Query: 60 IPTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIK 119
+ T KVT+ + G HE VP+D+YIL AE Q LPF+CR G C++CA ++ SG +
Sbjct: 1 MATFKVTLINEAEGTKHEIEVPDDEYILDAAEEQGYDLPFSCRAGACSTCAGKLVSGTVD 60
Query: 120 QPEALGISAELKSKGYALLCVGYPSSDVEVETQDEDEV 157
Q + + + GY L CV YP+SDV ++T E+++
Sbjct: 61 QSDQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEEDL 98
>sp|P00253|FER_NOSMU Ferredoxin OS=Nostoc muscorum PE=1 SV=2
Length = 99
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 60/98 (61%)
Query: 60 IPTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIK 119
+ T KVT+ + G HE VP+D+YIL AE + LPF+CR G C++CA ++ SG +
Sbjct: 1 MATFKVTLINEAEGTKHEIEVPDDEYILDAAEEEGYDLPFSCRAGACSTCAGKLVSGTVD 60
Query: 120 QPEALGISAELKSKGYALLCVGYPSSDVEVETQDEDEV 157
Q + + + GY L CV YP+SDV ++T E+++
Sbjct: 61 QSDQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEEDL 98
>sp|P00254|FER1_ANAVT Ferredoxin-1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937)
GN=petF1 PE=1 SV=2
Length = 99
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 59/98 (60%)
Query: 60 IPTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIK 119
+ T KVT+ + G + VP+D+YIL AE Q LPF+CR G C++CA ++ SG +
Sbjct: 1 MATFKVTLINEAEGTSNTIDVPDDEYILDAAEEQGYDLPFSCRAGACSTCAGKLVSGTVD 60
Query: 120 QPEALGISAELKSKGYALLCVGYPSSDVEVETQDEDEV 157
Q + + + GY L CV YP+SDV ++T E+++
Sbjct: 61 QSDQSFLDDDQIEAGYVLTCVAYPTSDVTIQTHKEEDL 98
>sp|P00248|FER_MASLA Ferredoxin OS=Mastigocladus laminosus GN=petF PE=1 SV=2
Length = 99
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 59/98 (60%)
Query: 60 IPTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIK 119
+ T+KVT+ + G+ VP+DQYIL AE I LP++CR G C++CA ++ SG +
Sbjct: 1 MATYKVTLINEAEGLNKTIEVPDDQYILDAAEEAGIDLPYSCRAGACSTCAGKLISGTVD 60
Query: 120 QPEALGISAELKSKGYALLCVGYPSSDVEVETQDEDEV 157
Q + + + GY L CV YP+SD +ET E+E+
Sbjct: 61 QSDQSFLDDDQIEAGYVLTCVAYPTSDCVIETHKEEEL 98
>sp|P00252|FER1_NOSMU Ferredoxin-1 OS=Nostoc muscorum PE=1 SV=2
Length = 99
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Query: 63 HKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPE 122
+KVT+ D+ G VP+D+YIL AE Q + LP++CR G C++CA +I SG + Q +
Sbjct: 5 YKVTLVDQ-EGTETTIDVPDDEYILDIAEDQGLDLPYSCRAGACSTCAGKIVSGTVDQSD 63
Query: 123 ALGISAELKSKGYALLCVGYPSSDVEVETQDEDEV 157
+ + KGY L CV YP+SD+++ET E+++
Sbjct: 64 QSFLDDDQIEKGYVLTCVAYPTSDLKIETHKEEDL 98
>sp|P15788|FER_HALP7 Ferredoxin OS=Halothece sp. (strain PCC 7418) PE=1 SV=2
Length = 99
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 60/98 (61%)
Query: 60 IPTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIK 119
+ ++KVT+ + G+ VP+D+YIL AE + I LP++CR G C++CA +IK G+I
Sbjct: 1 MASYKVTLINEEMGLNETIEVPDDEYILDVAEEEGIDLPYSCRAGACSTCAGKIKEGEID 60
Query: 120 QPEALGISAELKSKGYALLCVGYPSSDVEVETQDEDEV 157
Q + + + GY L CV YP+SD + T E+E+
Sbjct: 61 QSDQSFLDDDQIEAGYVLTCVAYPASDCTIITHQEEEL 98
>sp|P00247|FER_CHLFR Ferredoxin OS=Chlorogloeopsis fritschii PE=1 SV=2
Length = 99
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 58/98 (59%)
Query: 60 IPTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIK 119
+ T+KVT+ + G+ V +D YIL AE + LP++CR G C++CA +IKSG +
Sbjct: 1 MATYKVTLINDAEGLNQTIEVDDDTYILDAAEEAGLDLPYSCRAGACSTCAGKIKSGTVD 60
Query: 120 QPEALGISAELKSKGYALLCVGYPSSDVEVETQDEDEV 157
Q + + + GY L CV YP+SD +ET E+E+
Sbjct: 61 QSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEEL 98
>sp|P0A3D3|FER1_SYNP6 Ferredoxin-1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 /
SAUG 1402/1) GN=petF1 PE=1 SV=2
Length = 99
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 60/98 (61%)
Query: 60 IPTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIK 119
+ T+KVT+ + G+ V +D YIL AE Q I LP++CR G C++CA ++ SG +
Sbjct: 1 MATYKVTLVNAAEGLNTTIDVADDTYILDAAEEQGIDLPYSCRAGACSTCAGKVVSGTVD 60
Query: 120 QPEALGISAELKSKGYALLCVGYPSSDVEVETQDEDEV 157
Q + + + + G+ L CV YP+SDV +ET E+++
Sbjct: 61 QSDQSFLDDDQIAAGFVLTCVAYPTSDVTIETHKEEDL 98
>sp|P0A3D2|FER1_SYNE7 Ferredoxin-1 OS=Synechococcus elongatus (strain PCC 7942) GN=petF
PE=3 SV=2
Length = 99
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 60/98 (61%)
Query: 60 IPTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIK 119
+ T+KVT+ + G+ V +D YIL AE Q I LP++CR G C++CA ++ SG +
Sbjct: 1 MATYKVTLVNAAEGLNTTIDVADDTYILDAAEEQGIDLPYSCRAGACSTCAGKVVSGTVD 60
Query: 120 QPEALGISAELKSKGYALLCVGYPSSDVEVETQDEDEV 157
Q + + + + G+ L CV YP+SDV +ET E+++
Sbjct: 61 QSDQSFLDDDQIAAGFVLTCVAYPTSDVTIETHKEEDL 98
>sp|Q51577|FER1_PLEBO Ferredoxin-1 OS=Plectonema boryanum GN=petF1 PE=1 SV=1
Length = 99
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 59/98 (60%)
Query: 60 IPTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIK 119
+P+ KVT+ + G+ VP+D+YIL AE Q I LP++CR G C++CA +I +G +
Sbjct: 1 MPSFKVTLINETEGLNTTIEVPDDEYILDAAEEQGIDLPYSCRAGACSTCAGKITAGTVD 60
Query: 120 QPEALGISAELKSKGYALLCVGYPSSDVEVETQDEDEV 157
Q + + + GY L CV YP+SD + T E+++
Sbjct: 61 QSDQSFLDDDQIQAGYVLTCVAYPTSDCTILTHQEEDL 98
>sp|P14936|FER1_RAPSA Ferredoxin, root R-B1 OS=Raphanus sativus PE=1 SV=1
Length = 98
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%)
Query: 73 GVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKS 132
G +EF VP+DQYIL AE + LP++CR G C++CA +I+ GQ+ Q + +
Sbjct: 13 GQENEFDVPDDQYILDAAEEAGVDLPYSCRAGACSTCAGKIEKGQVDQSDGSFLEDHHFE 72
Query: 133 KGYALLCVGYPSSDVEVETQDEDEV 157
KGY L CV YP SD+ + T E+E+
Sbjct: 73 KGYVLTCVAYPQSDLVIHTHKEEEL 97
>sp|P81372|FERA_ALOMA Ferredoxin-A OS=Alocasia macrorrhizos PE=1 SV=1
Length = 97
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 53/82 (64%)
Query: 76 HEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGY 135
EF P+D YIL AE + I LP++CR G C+SCA ++K G++ Q + + E +G+
Sbjct: 14 QEFDCPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVKQGEVDQSDGSFLDDEQMEQGW 73
Query: 136 ALLCVGYPSSDVEVETQDEDEV 157
L CV +P+SDV +ET E+E+
Sbjct: 74 VLTCVAFPTSDVVIETHKEEEL 95
>sp|P94044|FER6_MAIZE Ferredoxin-6, chloroplastic OS=Zea mays GN=FDX6 PE=2 SV=1
Length = 155
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%)
Query: 73 GVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKS 132
G HEF P+D YIL AE+ + LPF+CR G C++CA R+ +G++ Q E + +
Sbjct: 70 GTEHEFEAPDDTYILEAAETAGVELPFSCRAGSCSTCAGRMSAGEVDQSEGSFLDDGQMA 129
Query: 133 KGYALLCVGYPSSDVEVETQDEDEV 157
+GY L C+ YP +D + T E+++
Sbjct: 130 EGYLLTCISYPKADCVIHTHKEEDL 154
>sp|P81373|FERB_ALOMA Ferredoxin-B OS=Alocasia macrorrhizos PE=1 SV=1
Length = 98
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
EF P+D YIL AE + I LP++CR G C+SCA ++K+G + Q + + + +G+
Sbjct: 16 EFECPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVKNGNVDQSDGSFLDDDQIGEGWV 75
Query: 137 LLCVGYPSSDVEVETQDEDEV 157
L CV YP+SDV +ET E+E+
Sbjct: 76 LTCVAYPTSDVVIETHKEEEL 96
>sp|P27788|FER3_MAIZE Ferredoxin-3, chloroplastic OS=Zea mays GN=FDX3 PE=2 SV=1
Length = 152
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 4/137 (2%)
Query: 21 TSSTYNNTRNPSSLKCRPRKTVSSELQTTAGVNGSYSPSIPTHKVTVHDRFRGVVHEFLV 80
T ++ ++PSSL + T L+T+ ++ S ++ +KV + G HEF
Sbjct: 19 TQASQTAVKSPSSLSFFSQVTKVPSLKTSKKLDVS---AMAVYKVKLVGP-EGEEHEFDA 74
Query: 81 PEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCV 140
P+D YIL AE+ + LP++CR G C++CA +I+SG + Q + + + +GY L CV
Sbjct: 75 PDDAYILDAAETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFLDDGQQEEGYVLTCV 134
Query: 141 GYPSSDVEVETQDEDEV 157
YP SD + T E ++
Sbjct: 135 SYPKSDCVIHTHKEGDL 151
>sp|P04669|FER_SILPR Ferredoxin, chloroplastic OS=Silene pratensis GN=PETF PE=2 SV=1
Length = 146
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 50 AGVNGSYSPSIPTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSC 109
AG G + ++ T+KVT+ + G V F P+D Y+L AE + I LP++CR G C+SC
Sbjct: 39 AGSRGRVT-AMATYKVTLITKESGTVT-FDCPDDVYVLDQAEEEGIDLPYSCRAGSCSSC 96
Query: 110 AVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSSDVEVETQDEDEV 157
A ++ +G + Q + + + G+ L C YPS+DV +ET E+E+
Sbjct: 97 AGKVVAGSVDQSDQSFLDDDQIEAGWVLTCAAYPSADVTIETHKEEEL 144
>sp|P13106|FER_BUMFI Ferredoxin OS=Bumilleriopsis filiformis PE=1 SV=1
Length = 98
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 58/96 (60%)
Query: 62 THKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQP 121
T+ VT+ + + + P+DQ+IL AE Q I LP++CR G C++CA ++ SG I Q
Sbjct: 2 TYSVTLVNEEKNINAVIKCPDDQFILDAAEEQGIELPYSCRAGACSTCAGKVLSGTIDQS 61
Query: 122 EALGISAELKSKGYALLCVGYPSSDVEVETQDEDEV 157
E + + G+ L CV YP+SD +V+T ED++
Sbjct: 62 EQSFLDDDQMGAGFLLTCVAYPTSDCKVQTHAEDDL 97
>sp|P00221|FER1_SPIOL Ferredoxin-1, chloroplastic OS=Spinacia oleracea GN=PETF PE=1 SV=2
Length = 147
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 3/127 (2%)
Query: 31 PSSLKCRPRKTVSSELQTTAGVNGSYSPSIPTHKVTVHDRFRGVVHEFLVPEDQYILHTA 90
P + P T S G G ++ +KVT+ V EF P+D YIL A
Sbjct: 22 PPMMAALPSNTGRSLFGLKTGSRGGRM-TMAAYKVTLVTPTGNV--EFQCPDDVYILDAA 78
Query: 91 ESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGYPSSDVEVE 150
E + I LP++CR G C+SCA ++K+G + Q + + + +G+ L C YP SDV +E
Sbjct: 79 EEEGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQIDEGWVLTCAAYPVSDVTIE 138
Query: 151 TQDEDEV 157
T E+E+
Sbjct: 139 THKEEEL 145
>sp|P27789|FER5_MAIZE Ferredoxin-5, chloroplastic OS=Zea mays GN=FDX5 PE=2 SV=1
Length = 135
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
E VP+D YIL AE + I LP++CR G C+SCA ++ SG + Q + + + G+
Sbjct: 53 ELQVPDDVYILDYAEEEGIDLPYSCRAGSCSSCAGKVVSGSLDQSDQSFLDDSQVADGWV 112
Query: 137 LLCVGYPSSDVEVETQDEDEV 157
L CV YP+SDV +ET ED++
Sbjct: 113 LTCVAYPTSDVVIETHKEDDL 133
>sp|Q9ZQG8|FER3_ARATH Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana GN=FD3 PE=1
SV=1
Length = 155
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Query: 8 SSCCRKPPLHRQLTSSTYNNTRNPSSLKCRPRKTVSSELQTTAGVNGSYSPSIPTHKVTV 67
S+ K L Q T+ N S+ R + S L+ +A G+ ++ K+
Sbjct: 8 STSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAVYKVKLLG 67
Query: 68 HDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGIS 127
D G EF V +DQYIL AE + LP++CR G C++CA +I SG + Q + +
Sbjct: 68 PD---GQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDGSFLE 124
Query: 128 AELKSKGYALLCVGYPSSDVEVETQDEDEV 157
KGY L CV YP SD + T E E+
Sbjct: 125 DSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154
>sp|P0A3D1|FER_THEVL Ferredoxin-1 OS=Thermosynechococcus vulcanus GN=petF1 PE=3 SV=2
Length = 98
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Query: 60 IPTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIK 119
+ T+KVT+ R G VPED+YIL AE Q + LPF+CR G C++CA ++ G++
Sbjct: 1 MATYKVTLV-RPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVD 59
Query: 120 QPEALGISAELKSKGYALLCVGYPSSDVEVETQDEDEV 157
Q + + + KG+ L CV YP SD ++ T E+E+
Sbjct: 60 QSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 97
>sp|P0A3C9|FER_THEEB Ferredoxin-1 OS=Thermosynechococcus elongatus (strain BP-1)
GN=petF1 PE=1 SV=2
Length = 98
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Query: 60 IPTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIK 119
+ T+KVT+ R G VPED+YIL AE Q + LPF+CR G C++CA ++ G++
Sbjct: 1 MATYKVTLV-RPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVD 59
Query: 120 QPEALGISAELKSKGYALLCVGYPSSDVEVETQDEDEV 157
Q + + + KG+ L CV YP SD ++ T E+E+
Sbjct: 60 QSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 97
>sp|P0A3D0|FER_SYNEL Ferredoxin-1 OS=Synechococcus elongatus GN=petF1 PE=3 SV=2
Length = 98
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Query: 60 IPTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIK 119
+ T+KVT+ R G VPED+YIL AE Q + LPF+CR G C++CA ++ G++
Sbjct: 1 MATYKVTLV-RPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVD 59
Query: 120 QPEALGISAELKSKGYALLCVGYPSSDVEVETQDEDEV 157
Q + + + KG+ L CV YP SD ++ T E+E+
Sbjct: 60 QSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 97
>sp|Q0J8M2|FER1_ORYSJ Ferredoxin-1, chloroplastic OS=Oryza sativa subsp. japonica GN=ADI1
PE=1 SV=1
Length = 139
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
E VP+D YIL AE + I LP++CR G C+SCA ++ SG+I Q + + + + G+
Sbjct: 58 ELQVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVVSGEIDQSDQSFLDDDQVAAGWV 117
Query: 137 LLCVGYPSSDVEVETQDEDEV 157
L C YP SDV +ET ED++
Sbjct: 118 LTCHAYPKSDVVIETHKEDDL 138
>sp|A2YQD9|FER1_ORYSI Ferredoxin-1, chloroplastic OS=Oryza sativa subsp. indica GN=ADI1
PE=1 SV=1
Length = 139
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
E VP+D YIL AE + I LP++CR G C+SCA ++ SG+I Q + + + + G+
Sbjct: 58 ELQVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVVSGEIDQSDQSFLDDDQVAAGWV 117
Query: 137 LLCVGYPSSDVEVETQDEDEV 157
L C YP SDV +ET ED++
Sbjct: 118 LTCHAYPKSDVVIETHKEDDL 138
>sp|P00244|FER1_APHFL Ferredoxin-1 OS=Aphanizomenon flos-aquae PE=1 SV=2
Length = 98
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 60 IPTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIK 119
+ T+KVT+ D G P+D YIL AE + LP++CR G C++CA ++ +G I
Sbjct: 1 MATYKVTLIDA-EGTTTTIDCPDDTYILDAAEEAGLDLPYSCRAGACSTCAGKLVTGTID 59
Query: 120 QPEALGISAELKSKGYALLCVGYPSSDVEVETQDEDEV 157
Q + + + GY L CV YP+SDV +ET E+++
Sbjct: 60 QSDQSFLDDDQVEAGYVLTCVAYPTSDVTIETHKEEDL 97
>sp|O04683|FER1_MESCR Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum PE=2
SV=1
Length = 148
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%)
Query: 76 HEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGY 135
E P+D YIL AE I LP++CR G C+SCA ++ SG + Q + + + +G+
Sbjct: 65 QELECPDDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVTSGSVNQDDGSFLDDDQIKEGW 124
Query: 136 ALLCVGYPSSDVEVETQDEDEV 157
L CV YP+ DV +ET E+E+
Sbjct: 125 VLTCVAYPTGDVTIETHKEEEL 146
>sp|P83522|FER_HORVU Ferredoxin OS=Hordeum vulgare PE=1 SV=1
Length = 97
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
E VP+D YIL AE + I LP++CR G C+SCA ++ SG+I Q + + + +G+
Sbjct: 15 ELEVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKLVSGEIDQSDQSFLDDDQMEEGWV 74
Query: 137 LLCVGYPSSDVEVETQDEDEV 157
L C YP SDV +ET E+E+
Sbjct: 75 LTCAAYPKSDVVIETHKEEEL 95
>sp|P83585|FER_SOLAB Ferredoxin OS=Solanum abutiloides PE=1 SV=1
Length = 97
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
EF P+D+YIL AE + LP++CR G C+SCA +I +G + Q + + + + G+
Sbjct: 15 EFECPDDEYILDRAEEEGHDLPYSCRAGSCSSCAGKIAAGSVDQSDGNFLDDDQIADGFV 74
Query: 137 LLCVGYPSSDVEVETQDEDEV 157
L CV YP SDV +ET E+E+
Sbjct: 75 LTCVAYPQSDVTIETHKEEEL 95
>sp|P00255|FER_SYNLI Ferredoxin OS=Synechococcus lividus PE=1 SV=2
Length = 97
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 50/78 (64%)
Query: 80 VPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLC 139
VPED+YIL AE Q + LPF+CR G C++CA ++ G++ Q + + + KG+ L C
Sbjct: 19 VPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTC 78
Query: 140 VGYPSSDVEVETQDEDEV 157
V YP SD ++ T E+E+
Sbjct: 79 VAYPRSDCKILTHQEEEL 96
>sp|P00222|FER_COLES Ferredoxin OS=Colocasia esculenta PE=1 SV=1
Length = 97
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%)
Query: 76 HEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGY 135
EF P+D YIL AE I LP++CR G C+SCA ++K G + Q + + E +G+
Sbjct: 14 QEFQCPDDVYILDQAEEVGIDLPYSCRAGSCSSCAGKVKVGDVDQSDGSFLDDEQIGEGW 73
Query: 136 ALLCVGYPSSDVEVETQDEDEV 157
L CV YP SD +ET E+E+
Sbjct: 74 VLTCVAYPVSDGTIETHKEEEL 95
>sp|P00220|FER_MEDSA Ferredoxin OS=Medicago sativa PE=1 SV=1
Length = 97
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 76 HEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGY 135
EF P+D YIL AE + I LP++CR G C+SCA ++ +G++ Q + + + +G+
Sbjct: 14 QEFECPDDVYILDHAEEEGIVLPYSCRAGSCSSCAGKVAAGEVNQSDGSFLDDDQIEEGW 73
Query: 136 ALLCVGYPSSDVEVETQDEDEV 157
L CV Y SDV +ET E+E+
Sbjct: 74 VLTCVAYAKSDVTIETHKEEEL 95
>sp|P84874|FER2_HYONI Ferredoxin-2 OS=Hyoscyamus niger PE=1 SV=1
Length = 97
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
EF P+D YIL AE + LP++CR G C+SCA ++K+G + Q + + + + G+
Sbjct: 15 EFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVKAGTVDQSDGNFLDDDQMADGFV 74
Query: 137 LLCVGYPSSDVEVETQDEDEV 157
L CV YP SDV +ET E+++
Sbjct: 75 LTCVAYPQSDVTIETHKEEDL 95
>sp|P09911|FER1_PEA Ferredoxin-1, chloroplastic OS=Pisum sativum GN=PETF PE=1 SV=2
Length = 149
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%)
Query: 76 HEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGY 135
EF P D YIL AE I LP++CR G C+SCA ++ G++ Q + + E G+
Sbjct: 66 QEFECPSDVYILDHAEEVGIDLPYSCRAGSCSSCAGKVVGGEVDQSDGSFLDDEQIEAGF 125
Query: 136 ALLCVGYPSSDVEVETQDEDEV 157
L CV YP+SDV +ET E+++
Sbjct: 126 VLTCVAYPTSDVVIETHKEEDL 147
>sp|Q9TLW0|FER1_CYACA Ferredoxin OS=Cyanidium caldarium GN=petF PE=3 SV=3
Length = 99
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%)
Query: 60 IPTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIK 119
+ ++KV + + G+ E P DQYIL AE Q I LP++CR G C++CA ++ SG +
Sbjct: 1 MTSYKVKLTNEKEGIDVEINCPNDQYILDAAEEQGIDLPYSCRAGACSTCAGKLISGTVD 60
Query: 120 QPEALGISAELKSKGYALLCVGYPSSDVEVETQDED 155
Q + + E +G+ L CV YP+S+ + T E+
Sbjct: 61 QSDQSFLDDEQIKEGFVLTCVAYPTSNCTILTHQEE 96
>sp|P83583|FER_SOLLY Ferredoxin OS=Solanum lyratum PE=1 SV=1
Length = 97
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
EF P+D YIL +AE LP++CR G C+SCA +I +G + Q + + + ++G+
Sbjct: 15 EFNCPDDVYILDSAEENGHDLPYSCRAGACSSCAGKITAGNVDQSDNSFLDDDQVAEGFV 74
Query: 137 LLCVGYPSSDVEVETQDEDEV 157
L CV YP S+V +ET ED++
Sbjct: 75 LTCVAYPKSNVTIETHKEDDL 95
>sp|P00228|FER_WHEAT Ferredoxin, chloroplastic OS=Triticum aestivum GN=PETF PE=1 SV=2
Length = 143
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
E VP+D YIL AE + I LP++CR G C+SCA ++ SG+I Q + + + G+
Sbjct: 61 ELEVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKLVSGEIDQSDQSFLDDDQMEAGWV 120
Query: 137 LLCVGYPSSDVEVETQDEDEV 157
L C YP SD+ +ET E+E+
Sbjct: 121 LTCHAYPKSDIVIETHKEEEL 141
>sp|P68164|FER_DATME Ferredoxin OS=Datura metel PE=1 SV=1
Length = 97
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
EF P+D YIL AE + LP++CR G C+SCA ++ +G + Q + + + ++G+
Sbjct: 15 EFDCPDDVYILDRAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMAEGFV 74
Query: 137 LLCVGYPSSDVEVETQDEDEV 157
L CV YP SDV +ET E+E+
Sbjct: 75 LTCVAYPQSDVTIETHKEEEL 95
>sp|P68163|FER_DATIN Ferredoxin OS=Datura inoxia PE=1 SV=1
Length = 97
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
EF P+D YIL AE + LP++CR G C+SCA ++ +G + Q + + + ++G+
Sbjct: 15 EFDCPDDVYILDRAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMAEGFV 74
Query: 137 LLCVGYPSSDVEVETQDEDEV 157
L CV YP SDV +ET E+E+
Sbjct: 75 LTCVAYPQSDVTIETHKEEEL 95
>sp|P00245|FER_SPIMA Ferredoxin OS=Spirulina maxima PE=1 SV=2
Length = 99
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%)
Query: 60 IPTHKVTVHDRFRGVVHEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIK 119
+ T+KVT+ G+ +D YIL AE + LP++CR G C++CA +I SG I
Sbjct: 1 MATYKVTLISEAEGINETIDCDDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITSGSID 60
Query: 120 QPEALGISAELKSKGYALLCVGYPSSDVEVETQDED 155
Q + + + GY L CV YP+SD ++T E+
Sbjct: 61 QSDQSFLDDDQIEAGYVLTCVAYPTSDCTIQTHQEE 96
>sp|Q43517|FER1_SOLLC Ferredoxin-1, chloroplastic OS=Solanum lycopersicum GN=SEND33 PE=2
SV=1
Length = 144
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
EF P+D YIL AE + LP++CR G C+SCA ++ +G + Q + + + ++ G+
Sbjct: 62 EFECPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGSVDQSDGNFLDEDQEAAGFV 121
Query: 137 LLCVGYPSSDVEVETQDEDEV 157
L CV YP DV +ET E+E+
Sbjct: 122 LTCVAYPKGDVTIETHKEEEL 142
>sp|P68165|FER_DATST Ferredoxin OS=Datura stramonium PE=1 SV=1
Length = 97
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
EF P+D YIL AE + LP++CR G C+SCA ++ +G + Q + + + + G+
Sbjct: 15 EFNCPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMADGFV 74
Query: 137 LLCVGYPSSDVEVETQDEDEV 157
L CV YP SDV +ET E+E+
Sbjct: 75 LTCVAYPQSDVTIETHKEEEL 95
>sp|P68166|FER_DATQU Ferredoxin OS=Datura quercifolia PE=1 SV=1
Length = 97
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
EF P+D YIL AE + LP++CR G C+SCA ++ +G + Q + + + + G+
Sbjct: 15 EFNCPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMADGFV 74
Query: 137 LLCVGYPSSDVEVETQDEDEV 157
L CV YP SDV +ET E+E+
Sbjct: 75 LTCVAYPQSDVTIETHKEEEL 95
>sp|P84872|FER_ATRBE Ferredoxin OS=Atropa belladonna PE=1 SV=1
Length = 97
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
EF P+D YIL AE + LP++CR G C+SCA ++ +G + Q + + + + G+
Sbjct: 15 EFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQMADGFV 74
Query: 137 LLCVGYPSSDVEVETQDEDEV 157
L CV YP SDV +ET E+E+
Sbjct: 75 LTCVAYPQSDVTIETHKEEEL 95
>sp|P83526|FER_TOBAC Ferredoxin OS=Nicotiana tabacum PE=1 SV=1
Length = 97
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
EF P+D YIL AE LP++CR G C+SCA ++ +G + Q + + + + G+
Sbjct: 15 EFDCPDDVYILDQAEEMGHDLPYSCRAGSCSSCAGKVTAGNVDQSDGNFLDDDQMADGFV 74
Query: 137 LLCVGYPSSDVEVETQDEDEV 157
L CV YP SDV +ET E+E+
Sbjct: 75 LTCVAYPQSDVTIETHKEEEL 95
>sp|P83520|FER_DATAR Ferredoxin OS=Datura arborea PE=1 SV=1
Length = 97
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 77 EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYA 136
EF P+D YIL AE + LP++CR G C+SCA ++ +G + Q + + + + G+
Sbjct: 15 EFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQMADGFV 74
Query: 137 LLCVGYPSSDVEVETQDEDEV 157
L CV YP SDV +ET E+E+
Sbjct: 75 LTCVAYPQSDVTIETHKEEEL 95
>sp|O04090|FER1_ARATH Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana GN=FD1 PE=1
SV=1
Length = 148
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%)
Query: 83 DQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGYALLCVGY 142
D Y+L AE + LP++CR G C+SCA ++ SG I Q + + E S+GY L CV Y
Sbjct: 73 DVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVAY 132
Query: 143 PSSDVEVETQDEDEV 157
P+SDV +ET E+ +
Sbjct: 133 PTSDVVIETHKEEAI 147
>sp|P00226|FER_SAMNI Ferredoxin OS=Sambucus nigra PE=1 SV=1
Length = 97
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 76 HEFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKSGQIKQPEALGISAELKSKGY 135
EF P+D YIL AE I +P++CR G C+SCA ++ +G + Q + + E +G+
Sbjct: 14 QEFECPDDVYILEHAEELGIDIPYSCRAGSCSSCAGKLVAGSVDQSDQSFLDDEQIEEGW 73
Query: 136 ALLCVGYPSSDVEVETQDEDEV 157
L CV YP SDV +ET E+E+
Sbjct: 74 VLTCVAYPKSDVTIETHKEEEL 95
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,122,544
Number of Sequences: 539616
Number of extensions: 2357420
Number of successful extensions: 5854
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 5650
Number of HSP's gapped (non-prelim): 215
length of query: 165
length of database: 191,569,459
effective HSP length: 109
effective length of query: 56
effective length of database: 132,751,315
effective search space: 7434073640
effective search space used: 7434073640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)