BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031121
(165 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DJ87|CC90B_XENTR Coiled-coil domain-containing protein 90B, mitochondrial OS=Xenopus
tropicalis GN=ccdc90b PE=2 SV=2
Length = 267
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 19 TKSQGFNLNYSNTIGY--RQISQLVKSNGKRAFLVDTLQLVRGLEAQGVPSKQAEAITAA 76
T +GF + + GY RQ+ + +R DT LVR LE G QAE I +A
Sbjct: 42 TWKKGFATSAALPAGYDVRQVE--ITPLEQRKLTFDTHALVRELETHGFDKVQAETIVSA 99
Query: 77 ITEVLNDSLENVAHTFVSKGEMQKTEMIQEANLSKFKSEVQSSQEHHFSMLQRETEKLRS 136
+ + N S++ V V++ + + T A+L + ++ ++ F+ L+ E EK++
Sbjct: 100 LATLTNASIDTVYRDMVTRAQQEITVQQIMAHLDSIRKDMVILEKSEFATLRAENEKMKI 159
Query: 137 DIEKMRSELRYEIDKVTAGQRLDLNLERG 165
++E +R L E ++++A +LD+NLER
Sbjct: 160 ELEHVRQHLLNETNRISADAKLDMNLERS 188
>sp|Q9GZT6|CC90B_HUMAN Coiled-coil domain-containing protein 90B, mitochondrial OS=Homo
sapiens GN=CCDC90B PE=1 SV=2
Length = 254
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 68/120 (56%)
Query: 46 KRAFLVDTLQLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQ 105
+R DT LV+ LE G QAE I +A+T + N SL+ + V++ + + T
Sbjct: 56 QRKLTFDTHALVQDLETHGFDKTQAETIVSALTALSNVSLDTIYKEMVTQAQQEITVQQL 115
Query: 106 EANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERG 165
A+L + ++ ++ F+ L+ E EK++ ++++++ +L +E ++ A +LD+NLER
Sbjct: 116 MAHLDAIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLMHETSRIRADNKLDINLERS 175
>sp|O14042|FMP32_SCHPO Protein fmp32, mitochondrial OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=fmp32 PE=3 SV=1
Length = 216
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 41 VKSNGKRAFL-----VDTLQLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSK 95
V+S G F ++L+ VR L+ G+ K++E + I+ V +D E ++ V+K
Sbjct: 26 VRSLGLNGFYRKYHGFNSLRFVRVLQEAGIDDKKSETLMRLISNVYSDMHEKISDFSVTK 85
Query: 96 GEMQKTEMIQEANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAG 155
+ + Q+ + + +SE+QS + L + E+L SD+E++++ R +++ T+
Sbjct: 86 EQQDRVMYQQKVDFAHLRSELQSIERQEMVALHSQVEQLFSDVERLKTSFRDQLNNSTSE 145
Query: 156 QRLDLNLER 164
RL LN++R
Sbjct: 146 ARLQLNIDR 154
>sp|Q0P4J6|MCUR1_XENTR Mitochondrial calcium uniporter regulator 1 OS=Xenopus tropicalis
GN=ccdc90a PE=2 SV=1
Length = 262
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 87/149 (58%), Gaps = 3/149 (2%)
Query: 17 RVTKSQGFNLNYSNTIGYRQISQLVKSNGKRAFLVDTLQLVRGLEAQGVPSKQAEAITAA 76
RVT + FN+ ++T+ Y + + ++ + + DT +V+ LEA G ++Q+E + +A
Sbjct: 36 RVTCFRDFNI-ITSTMQYNLDKRNIYTSVGKHYFFDTHAVVQLLEANGFSAEQSEIVVSA 94
Query: 77 ITEVLNDSLENVAHTFVSKGEMQKTEMIQEANL-SKFKSEVQSSQEHHFSMLQRETEKLR 135
+ ++LN ++ N+ H + E Q+ + Q +L + K ++ ++ FS L+ + EK++
Sbjct: 95 LVKILNVNM-NLIHKDMVTKEQQEISLQQVMSLIASVKKDMIILEKSEFSALRTQNEKVK 153
Query: 136 SDIEKMRSELRYEIDKVTAGQRLDLNLER 164
++++++ +L I KV A +LD NLE+
Sbjct: 154 IELQQLKKQLNDSIVKVRASNKLDFNLEK 182
>sp|Q4V897|CC90B_RAT Coiled-coil domain-containing protein 90B, mitochondrial OS=Rattus
norvegicus GN=Ccdc90b PE=2 SV=1
Length = 256
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 66/120 (55%)
Query: 46 KRAFLVDTLQLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQ 105
+R DT LV+ LE G QA+ I + ++ + N SL+ V V+K + + T
Sbjct: 56 QRKLTFDTHALVQDLETHGFDKGQAQTIVSVLSTLSNVSLDTVYKEMVTKAQQEITIQQL 115
Query: 106 EANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERG 165
A+L + ++ ++ F+ L+ E EK++ ++++++ +L E ++ A RLD+NLER
Sbjct: 116 MAHLDSIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLINETSRIRADNRLDINLERS 175
>sp|P43557|FMP32_YEAST Protein FMP32, mitochondrial OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=FMP32 PE=1 SV=1
Length = 207
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 56/97 (57%)
Query: 69 QAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQEANLSKFKSEVQSSQEHHFSMLQ 128
QA I +T+ + + +V+ + ++ + Q + +K + ++ S+ F +Q
Sbjct: 50 QATTIVEIMTDAIRGGVNHVSQDLAKREKLTQLSYQQRVDFAKLRDQLLSADRSEFHNIQ 109
Query: 129 RETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERG 165
E E +++D+EK+R++LR EI K AG +LDL+LE+G
Sbjct: 110 NEYESVKNDLEKLRNKLREEITKTNAGFKLDLSLEKG 146
>sp|Q8C3X2|CC90B_MOUSE Coiled-coil domain-containing protein 90B, mitochondrial OS=Mus
musculus GN=Ccdc90b PE=2 SV=1
Length = 256
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 66/120 (55%)
Query: 46 KRAFLVDTLQLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQ 105
+R DT LV+ LE G QA+ I + ++ + N SL+ + V+K + + T
Sbjct: 56 QRKLTFDTHALVQDLETHGFDKTQAQTIVSVLSTLSNVSLDTIYKEMVTKAQQEITVQQL 115
Query: 106 EANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERG 165
A+L + ++ ++ F+ L+ E EK++ ++++++ +L E ++ A +LD+NLER
Sbjct: 116 MAHLDSIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLTNETSRIRADNKLDINLERS 175
>sp|Q96AQ8|MCUR1_HUMAN Mitochondrial calcium uniporter regulator 1 OS=Homo sapiens
GN=CCDC90A PE=1 SV=1
Length = 359
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 68/122 (55%)
Query: 43 SNGKRAFLVDTLQLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTE 102
S+G R DT LV LE G ++QAE I +A+ ++L +++ V V+K + + T
Sbjct: 158 SSGSRKLYFDTHALVCLLEDNGFATQQAEIIVSALVKILEANMDIVYKDMVTKMQQEITF 217
Query: 103 MIQEANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNL 162
+ ++ K ++ ++ FS L+ E EK++ ++ +++ ++ E+ KV +LD NL
Sbjct: 218 QQVMSQIANVKKDMIILEKSEFSALRAENEKIKLELHQLKQQVMDEVIKVRTDTKLDFNL 277
Query: 163 ER 164
E+
Sbjct: 278 EK 279
>sp|Q9CXD6|MCUR1_MOUSE Mitochondrial calcium uniporter regulator 1 OS=Mus musculus
GN=Ccdc90a PE=2 SV=1
Length = 340
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
Query: 47 RAFLVDTLQLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQE 106
R DT LV LEA G +QAE I +A+ ++ ++ + VSK MQ+ +Q+
Sbjct: 143 RQLYFDTHALVCLLEANGFTIQQAEIIVSALVKITETNMNIIYKDMVSK--MQQEIALQQ 200
Query: 107 --ANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLER 164
+ ++ K ++ ++ FS L+ E EK++ ++ +++ ++ E+ KV +L+ NLE+
Sbjct: 201 VLSKIANVKKDMVILEKSEFSALRAENEKIKLELHQLKQQVMDEVTKVRTDTKLNFNLEK 260
>sp|Q10073|YAN8_SCHPO Uncharacterized CCDC90 family protein C3H1.08c, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC3H1.08c PE=3 SV=1
Length = 211
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 57/108 (52%)
Query: 58 RGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQEANLSKFKSEVQ 117
R LE G K AE IT + + ++L + K + + Q+ + + ++
Sbjct: 44 RRLEQAGYSVKNAETITNLMRTITGEALTELEKNIGFKAKQESVSFQQKRTFLQIRKYLE 103
Query: 118 SSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLERG 165
+ +E+ F +++ ++KL ++IEK +S LR ++ + RL+LNLE+G
Sbjct: 104 TIEENEFDKVRKSSDKLINEIEKTKSSLREDVKTALSEVRLNLNLEKG 151
>sp|Q2NY41|GLNE_XANOM Glutamate-ammonia-ligase adenylyltransferase OS=Xanthomonas oryzae
pv. oryzae (strain MAFF 311018) GN=glnE PE=3 SV=1
Length = 941
Score = 35.4 bits (80), Expect = 0.18, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 119 SQEHHFSMLQ-RETEKLRSDIEKMRSELRYEIDKVTAGQRLDL 160
+Q +++++ R+T +L D+ KMR+ +R E+D+ AG RLDL
Sbjct: 789 AQVRRYTLMRVRDTAQLHEDVRKMRARMRTELDRSDAG-RLDL 830
>sp|Q8PPY3|GLNE_XANAC Glutamate-ammonia-ligase adenylyltransferase OS=Xanthomonas
axonopodis pv. citri (strain 306) GN=glnE PE=3 SV=1
Length = 941
Score = 35.0 bits (79), Expect = 0.20, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 126 MLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDL 160
M R+T +L D+ KMR+ +R E+D+ AG RLDL
Sbjct: 797 MRVRDTAQLHEDVRKMRARMRAELDRSDAG-RLDL 830
>sp|Q6CNY5|MED5_KLULA Mediator of RNA polymerase II transcription subunit 5
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=NUT1 PE=3
SV=1
Length = 1067
Score = 34.3 bits (77), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 24 FNLNYSNTIGYRQISQLVKSNGKRAFLVDTLQ-LVRGLEAQGVPSKQAEAITAAITEVLN 82
+NL+ S Y + +L+K FLVD+++ L + A G+P Q + T+AI +V N
Sbjct: 876 WNLHSSTYYNYDYLLELIKLITPEKFLVDSIRTLTYKVAAYGIPGVQGKLNTSAIEQVAN 935
>sp|Q61043|NIN_MOUSE Ninein OS=Mus musculus GN=Nin PE=2 SV=3
Length = 2035
Score = 33.1 bits (74), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 13 DSGVRVTKSQGFNLNYSNTIGYRQISQLVKSNGKRAF--LVDTLQLVRGLEAQGVPSKQA 70
+SG R S ++TIG+R S L G+ + ++DT Q +G+ + Q
Sbjct: 275 ESGRRTATSSAM----TSTIGFRVFSCLDDGMGQASVERILDTWQ------EEGIENSQE 324
Query: 71 EAITAAITEVLNDSLENVAHTFVSKGEMQKTEM-IQEANLSKFKSEVQSSQEHHFSMLQR 129
I A+ L+ ++ T + E+ T+ I +A L+ FK+E++ E + R
Sbjct: 325 --ILKALDFSLDGNINLTELTLALENELLVTKNGIHQAALASFKAEIRHLLER-VDQVVR 381
Query: 130 ETEKLRSDI---EKMRSELRYEIDKVTAG 155
E EKLRSD+ EK++S + E+D A
Sbjct: 382 EKEKLRSDLDKAEKLKSLMASEVDDHHAA 410
>sp|Q6NXH9|K2C73_MOUSE Keratin, type II cytoskeletal 73 OS=Mus musculus GN=Krt73 PE=1 SV=1
Length = 539
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 100 KTEMIQEANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKV 152
K E++Q+ +LS + ++ E H S LQ++ + L D ++ SELR D V
Sbjct: 162 KWELLQQLDLSNCRRNLEPVYEAHISSLQKQLDSLSGDRVRLDSELRGMRDAV 214
>sp|Q6IG03|K2C73_RAT Keratin, type II cytoskeletal 73 OS=Rattus norvegicus GN=Krt73 PE=1
SV=1
Length = 553
Score = 33.1 bits (74), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 100 KTEMIQEANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKV 152
K E++Q+ +LS + ++ E H S LQ++ + L D ++ SELR D V
Sbjct: 162 KWELLQQLDLSNCRRNLEPVYEAHISSLQKQLDSLSGDRVRLDSELRGMRDAV 214
>sp|A0Q1Z1|ARLY_CLONN Argininosuccinate lyase OS=Clostridium novyi (strain NT) GN=argH
PE=3 SV=1
Length = 437
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 70 AEAITAAITEVLNDSLENVAHTFVSKGE-MQKTEMIQEANLSKFKSEVQSSQEHHFSMLQ 128
A++IT I E +N+ LE + + S M +Q A + KFK + + ++SM
Sbjct: 120 AKSITFEIIEYINELLEVITNLADSNDVIMPGYTHLQRAQVIKFKLHMMA----YYSMFN 175
Query: 129 RETEKLRSDIEKM 141
R+ ++L SDIE M
Sbjct: 176 RDKKRLLSDIEVM 188
>sp|Q8ZVB2|MDH_PYRAE Malate dehydrogenase OS=Pyrobaculum aerophilum (strain ATCC 51768 /
IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=mdh PE=3
SV=1
Length = 309
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 4 CKRVVKLVADSGVRVTKSQGFNLNYSNTIGYRQISQLVKSNGKRAFL 50
K VV+ +G R+T+ +GF+ N+ G +++ VK + KRA +
Sbjct: 200 LKEVVEETVKAGARITELRGFSSNWGPGAGLAIMAEAVKRDAKRALI 246
>sp|Q9ULU4|PKCB1_HUMAN Protein kinase C-binding protein 1 OS=Homo sapiens GN=ZMYND8 PE=1
SV=2
Length = 1186
Score = 32.3 bits (72), Expect = 1.3, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 13/98 (13%)
Query: 67 SKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEMIQEANLSKFKSEVQSSQEHHFSM 126
SK +AI +TE+ ND +N + + A + + + E++ Q H
Sbjct: 931 SKMMDAIKGTMTEIYNDLSKNTTGSTI-------------AEIRRLRIEIEKLQWLHQQE 977
Query: 127 LQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLER 164
L L + +MR L E D++ A + L LE+
Sbjct: 978 LSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEK 1015
>sp|Q1INI5|HEM12_KORVE Glutamyl-tRNA reductase 2 OS=Koribacter versatilis (strain
Ellin345) GN=hemA2 PE=3 SV=1
Length = 436
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
Query: 83 DSLENVAHTFVS--KGEMQKTEMIQEANLSKFKSEVQ---------SSQEHHFSMLQRET 131
D L+ V H+ +S K E E I A + KF+ ++ S QEH ++ Q E
Sbjct: 298 DDLQQVVHSHISDRKDEAAHAEAIVNAEVEKFEERLRTLDVVPTIVSLQEHLETVRQAEI 357
Query: 132 EKLRSDIEKMRSELRYEIDKVTAG 155
++LR + ++ E +D +T G
Sbjct: 358 DRLRGRLGELSPEQEMAVDALTKG 381
>sp|B0U0S3|BIOB_FRAP2 Biotin synthase OS=Francisella philomiragia subsp. philomiragia
(strain ATCC 25017) GN=bioB PE=3 SV=1
Length = 313
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 55 QLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEM--IQEANLSKF 112
+ G + +P K + + ITEV N LE T V+ G + E ++EA L +
Sbjct: 88 RFCMGAAWKHIPKKDFDQVAEIITEVKNLGLE----TCVTLGSINAEEATKLKEAGLDYY 143
Query: 113 KSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAG 155
+ +S+E + ++ T K IE +R+ +I+ G
Sbjct: 144 NHNLDTSREFYPEIIT--TRKFEERIETIRNVANADINVCCGG 184
>sp|P50104|STB4_YEAST Probable transcriptional regulatory protein STB4 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=STB4 PE=1
SV=1
Length = 949
Score = 31.6 bits (70), Expect = 2.3, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 13 DSGVRVTKSQGFNLNYSNTIGYRQISQLVKSNGKRAFLVDTLQLVRGLEAQGVPSKQAEA 72
+S +R T++ ++N + T+ + SQ R+ + D+ + L + SK+ +
Sbjct: 235 ESSIRTTRTNASDVNANPTVVNMKNSQEDCDTNHRSAICDSAE---ALHNNNINSKENKI 291
Query: 73 ITAAITEVLNDSLENVAHTF 92
I + IT +ND E+ TF
Sbjct: 292 INSQITNTVNDHFESPWQTF 311
>sp|A5UKU6|SYA_METS3 Alanine--tRNA ligase OS=Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861) GN=alaS PE=3 SV=1
Length = 897
Score = 31.6 bits (70), Expect = 2.3, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 35/60 (58%)
Query: 104 IQEANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAGQRLDLNLE 163
IQ L+KF E++ S++H +++ E E+ +S I+K S ++ I ++ + ++ L+
Sbjct: 371 IQLEFLTKFYPEIKDSEDHIMNIISLEEERYQSTIKKGTSIVKRSIKRLKKEGKTEMPLD 430
>sp|C5P436|FCJ1_COCP7 Formation of crista junctions protein 1 OS=Coccidioides posadasii
(strain C735) GN=FCJ1 PE=3 SV=1
Length = 671
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 107 ANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTA 154
A+ K + ++++ + Q E EK R+D+EK +EL ID+V A
Sbjct: 347 ADFEKLGERIIAAKQESYKFAQEEIEKARADMEKSANELIRRIDEVRA 394
>sp|Q8P4V7|GLNE_XANCP Glutamate-ammonia-ligase adenylyltransferase OS=Xanthomonas
campestris pv. campestris (strain ATCC 33913 / NCPPB 528
/ LMG 568) GN=glnE PE=3 SV=1
Length = 937
Score = 31.2 bits (69), Expect = 3.1, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 129 RETEKLRSDIEKMRSELRYEIDKVTAGQRLDL 160
R+ L D+ KMR+ +R E+D+ AG RLDL
Sbjct: 799 RDPALLHEDVRKMRARMRSELDRSDAG-RLDL 829
>sp|Q4UZ80|GLNE_XANC8 Glutamate-ammonia-ligase adenylyltransferase OS=Xanthomonas
campestris pv. campestris (strain 8004) GN=glnE PE=3
SV=1
Length = 937
Score = 31.2 bits (69), Expect = 3.1, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 129 RETEKLRSDIEKMRSELRYEIDKVTAGQRLDL 160
R+ L D+ KMR+ +R E+D+ AG RLDL
Sbjct: 799 RDPALLHEDVRKMRARMRSELDRSDAG-RLDL 829
>sp|B0RN79|GLNE_XANCB Glutamate-ammonia-ligase adenylyltransferase OS=Xanthomonas
campestris pv. campestris (strain B100) GN=glnE PE=3
SV=1
Length = 937
Score = 31.2 bits (69), Expect = 3.3, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 129 RETEKLRSDIEKMRSELRYEIDKVTAGQRLDL 160
R+ L D+ KMR+ +R E+D+ AG RLDL
Sbjct: 799 RDPALLHEDVRKMRARMRSELDRSDAG-RLDL 829
>sp|A4IXP5|BIOB_FRATW Biotin synthase OS=Francisella tularensis subsp. tularensis (strain
WY96-3418) GN=bioB PE=3 SV=1
Length = 313
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 55 QLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEM--IQEANLSKF 112
+ G + +P K + + ITEV N LE T V+ G + E +++A L +
Sbjct: 88 RFCMGAAWKHIPKKDFDQVAEIITEVKNLGLE----TCVTLGSINADEATKLKQAGLDYY 143
Query: 113 KSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAG 155
+ +S+E + ++ T K IE +R+ +I+ G
Sbjct: 144 NHNLDTSREFYPEIIT--TRKFEERIETIRNVANADINVCCGG 184
>sp|A0Q638|BIOB_FRATN Biotin synthase OS=Francisella tularensis subsp. novicida (strain
U112) GN=bioB PE=3 SV=1
Length = 313
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 55 QLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEM--IQEANLSKF 112
+ G + +P K + + ITEV N LE T V+ G + E +++A L +
Sbjct: 88 RFCMGAAWKHIPKKDFDQVAEIITEVKNLGLE----TCVTLGSINADEATKLKQAGLDYY 143
Query: 113 KSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAG 155
+ +S+E + ++ T K IE +R+ +I+ G
Sbjct: 144 NHNLDTSREFYPEIIT--TRKFEERIETIRNVANADINVCCGG 184
>sp|Q5NGB2|BIOB_FRATT Biotin synthase OS=Francisella tularensis subsp. tularensis (strain
SCHU S4 / Schu 4) GN=bioB PE=3 SV=1
Length = 313
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 55 QLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEM--IQEANLSKF 112
+ G + +P K + + ITEV N LE T V+ G + E +++A L +
Sbjct: 88 RFCMGAAWKHIPKKDFDQVAEIITEVKNLGLE----TCVTLGSINADEATKLKQAGLDYY 143
Query: 113 KSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAG 155
+ +S+E + ++ T K IE +R+ +I+ G
Sbjct: 144 NHNLDTSREFYPEIIT--TRKFEERIETIRNVANADINVCCGG 184
>sp|B2SGE3|BIOB_FRATM Biotin synthase OS=Francisella tularensis subsp. mediasiatica
(strain FSC147) GN=bioB PE=3 SV=1
Length = 313
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 55 QLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEM--IQEANLSKF 112
+ G + +P K + + ITEV N LE T V+ G + E +++A L +
Sbjct: 88 RFCMGAAWKHIPKKDFDQVAEIITEVKNLGLE----TCVTLGSINADEATKLKQAGLDYY 143
Query: 113 KSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAG 155
+ +S+E + ++ T K IE +R+ +I+ G
Sbjct: 144 NHNLDTSREFYPEIIT--TRKFEERIETIRNVANADINVCCGG 184
>sp|Q14HR4|BIOB_FRAT1 Biotin synthase OS=Francisella tularensis subsp. tularensis (strain
FSC 198) GN=bioB PE=3 SV=1
Length = 313
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 55 QLVRGLEAQGVPSKQAEAITAAITEVLNDSLENVAHTFVSKGEMQKTEM--IQEANLSKF 112
+ G + +P K + + ITEV N LE T V+ G + E +++A L +
Sbjct: 88 RFCMGAAWKHIPKKDFDQVAEIITEVKNLGLE----TCVTLGSINADEATKLKQAGLDYY 143
Query: 113 KSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELRYEIDKVTAG 155
+ +S+E + ++ T K IE +R+ +I+ G
Sbjct: 144 NHNLDTSREFYPEIIT--TRKFEERIETIRNVANADINVCCGG 184
>sp|A5UM10|MPTA_METS3 GTP cyclohydrolase MptA OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=mptA PE=3 SV=1
Length = 311
Score = 30.8 bits (68), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 19 TKSQGFNLNYSNTIGYRQISQLVKSNGKRAFLVDTLQLVRGL--EAQGVP-SKQAEAITA 75
T S L G +++ QL ++N + LV T L + +GV S+ EAI+
Sbjct: 12 TPSIPIKLTRVGVTGVKKLLQLERNNKRPIILVPTFDAFVDLPNDQKGVHMSRNPEAISE 71
Query: 76 AITEVLNDS---LENVAHTFVSK 95
+ EV NDS +E + VSK
Sbjct: 72 VLDEVANDSSVEVETLCAKIVSK 94
>sp|Q8CGB3|UACA_MOUSE Uveal autoantigen with coiled-coil domains and ankyrin repeats
OS=Mus musculus GN=Uaca PE=1 SV=2
Length = 1411
Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 98 MQKTEMIQEANLSKFKSE--VQSSQ-----EHHFSMLQRETEKLRSDIEKMRSELRYEID 150
+K +Q+ NLS + E V+S+Q H F L+ E E LR + K++ E R +D
Sbjct: 268 WRKGPPLQQRNLSHTQDEGSVKSTQREQREPHSFQDLEIENEDLREKLRKIQQEQRILLD 327
Query: 151 KVTAGQRLDLNLE 163
KV G +L LN E
Sbjct: 328 KVN-GLQLQLNEE 339
>sp|Q6IME9|K2C72_MOUSE Keratin, type II cytoskeletal 72 OS=Mus musculus GN=Krt72 PE=2 SV=1
Length = 520
Score = 30.0 bits (66), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 100 KTEMIQEANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELR 146
K E++Q+ +L+ K ++ E + S LQ++ E L D ++ SELR
Sbjct: 165 KWELLQQLDLNNSKRSLEPVHESYISNLQKQLEILSGDRVRLDSELR 211
>sp|Q9R0H5|K2C71_MOUSE Keratin, type II cytoskeletal 71 OS=Mus musculus GN=Krt71 PE=1 SV=1
Length = 524
Score = 30.0 bits (66), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 100 KTEMIQEANLSKFKSEVQSSQEHHFSMLQRETEKLRSDIEKMRSELR 146
K E++Q+ +L+ K+ ++ E H S ++++ E L D ++ SELR
Sbjct: 162 KWELLQQLDLNNCKNNLEPILEGHISNMRKQLETLSGDRVRLDSELR 208
>sp|Q9M7J4|MFP1_TOBAC MAR-binding filament-like protein 1-1 OS=Nicotiana tabacum
GN=MFP1-1 PE=2 SV=1
Length = 722
Score = 30.0 bits (66), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 20/71 (28%)
Query: 108 NLSKFKSEVQSSQE--------------------HHFSMLQRETEKLRSDIEKMRSELRY 147
N+SK K EVQ +QE H S L+ E KL+ ++E+ R+ LR
Sbjct: 423 NISKLKLEVQVTQETLEKSRSDASDIAQQLQQSRHLCSKLEAEVSKLQMELEETRTSLRR 482
Query: 148 EIDKVTAGQRL 158
ID+ G L
Sbjct: 483 NIDETKRGAEL 493
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.127 0.331
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,823,439
Number of Sequences: 539616
Number of extensions: 1585045
Number of successful extensions: 7464
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 162
Number of HSP's that attempted gapping in prelim test: 7343
Number of HSP's gapped (non-prelim): 284
length of query: 165
length of database: 191,569,459
effective HSP length: 109
effective length of query: 56
effective length of database: 132,751,315
effective search space: 7434073640
effective search space used: 7434073640
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (26.2 bits)