Query 031123
Match_columns 165
No_of_seqs 126 out of 1835
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 09:33:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031123.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/031123hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00862 O-ClC intracellular 100.0 2E-30 4.3E-35 193.4 14.0 162 2-164 2-233 (236)
2 PLN02378 glutathione S-transfe 100.0 1.3E-28 2.7E-33 182.0 13.5 164 1-164 1-212 (213)
3 KOG1422 Intracellular Cl- chan 100.0 2.2E-28 4.8E-33 174.3 13.2 161 1-161 2-215 (221)
4 PLN02817 glutathione dehydroge 99.9 1E-26 2.2E-31 176.6 11.4 161 3-164 56-264 (265)
5 KOG0406 Glutathione S-transfer 99.9 3.4E-25 7.3E-30 162.4 11.9 151 13-164 11-224 (231)
6 PRK09481 sspA stringent starva 99.9 3.3E-21 7.2E-26 142.1 11.2 133 17-156 16-207 (211)
7 cd03198 GST_C_CLIC GST_C famil 99.8 2.6E-20 5.6E-25 127.4 9.7 112 50-161 7-134 (134)
8 PLN02473 glutathione S-transfe 99.8 2.1E-19 4.5E-24 132.6 10.6 75 71-150 136-210 (214)
9 cd03201 GST_C_DHAR GST_C famil 99.8 2.8E-19 6E-24 121.0 9.2 111 50-161 10-120 (121)
10 PRK10542 glutathionine S-trans 99.8 9.5E-19 2.1E-23 127.8 8.7 73 71-151 125-197 (201)
11 TIGR01262 maiA maleylacetoacet 99.8 3.8E-18 8.3E-23 125.4 11.6 75 72-152 131-205 (210)
12 PLN02395 glutathione S-transfe 99.8 3.4E-18 7.4E-23 126.1 11.0 76 70-150 134-209 (215)
13 KOG0868 Glutathione S-transfer 99.8 3.8E-18 8.2E-23 119.3 7.9 133 14-152 8-208 (217)
14 PRK10357 putative glutathione 99.7 1.9E-17 4.2E-22 121.0 11.3 76 70-151 125-200 (202)
15 PRK13972 GSH-dependent disulfi 99.7 2.2E-17 4.8E-22 122.0 10.1 74 71-152 133-206 (215)
16 PRK15113 glutathione S-transfe 99.7 1E-16 2.3E-21 118.4 12.3 135 2-153 5-210 (214)
17 PTZ00057 glutathione s-transfe 99.7 2E-17 4.2E-22 121.5 7.4 77 72-153 125-201 (205)
18 PRK10387 glutaredoxin 2; Provi 99.7 2.1E-16 4.6E-21 116.1 9.2 66 71-146 143-208 (210)
19 PRK11752 putative S-transferas 99.7 7.1E-16 1.5E-20 117.4 11.4 78 71-152 179-259 (264)
20 cd03184 GST_C_Omega GST_C fami 99.7 1.2E-15 2.6E-20 103.5 10.3 108 53-161 15-123 (124)
21 COG0625 Gst Glutathione S-tran 99.6 4.1E-15 8.9E-20 109.5 11.3 70 69-146 130-199 (211)
22 cd03203 GST_C_Lambda GST_C fam 99.6 9.1E-15 2E-19 98.7 8.7 87 73-160 33-120 (120)
23 TIGR02182 GRXB Glutaredoxin, G 99.6 1E-14 2.3E-19 107.4 8.0 66 70-146 141-207 (209)
24 cd03190 GST_C_ECM4_like GST_C 99.6 2.2E-14 4.7E-19 99.7 8.9 92 69-162 36-129 (142)
25 KOG4420 Uncharacterized conser 99.6 8.5E-15 1.8E-19 108.1 6.3 87 71-159 206-295 (325)
26 cd03185 GST_C_Tau GST_C family 99.6 3.9E-14 8.4E-19 96.0 9.2 89 69-160 34-124 (126)
27 KOG0867 Glutathione S-transfer 99.5 8.9E-14 1.9E-18 103.6 10.8 139 1-153 1-211 (226)
28 KOG3029 Glutathione S-transfer 99.5 8.1E-14 1.8E-18 104.1 7.6 68 70-142 288-355 (370)
29 KOG1695 Glutathione S-transfer 99.5 3.8E-13 8.2E-18 98.2 9.0 138 2-152 3-201 (206)
30 cd03207 GST_C_8 GST_C family, 99.5 4.6E-13 1E-17 87.7 8.2 73 69-150 29-101 (103)
31 cd03186 GST_C_SspA GST_N famil 99.4 4.6E-13 1E-17 88.3 7.6 73 69-148 34-106 (107)
32 PF00043 GST_C: Glutathione S- 99.4 1.1E-12 2.4E-17 84.5 8.6 68 69-143 27-95 (95)
33 cd03210 GST_C_Pi GST_C family, 99.4 3.9E-13 8.5E-18 91.4 6.1 79 69-152 34-113 (126)
34 cd03209 GST_C_Mu GST_C family, 99.4 7.6E-13 1.7E-17 89.3 7.0 78 69-153 34-111 (121)
35 cd03196 GST_C_5 GST_C family, 99.4 1.3E-12 2.9E-17 87.5 8.0 76 69-149 40-115 (115)
36 cd03191 GST_C_Zeta GST_C famil 99.4 1.1E-12 2.3E-17 88.4 7.6 75 71-151 45-119 (121)
37 COG0435 ECM4 Predicted glutath 99.4 3.2E-13 7E-18 100.6 5.0 91 69-161 204-296 (324)
38 cd03188 GST_C_Beta GST_C famil 99.4 1.4E-12 2.9E-17 86.7 7.2 72 69-148 42-113 (114)
39 cd03204 GST_C_GDAP1 GST_C fami 99.4 3.3E-12 7.2E-17 84.8 8.1 72 69-145 28-111 (111)
40 cd03208 GST_C_Alpha GST_C fami 99.4 2.2E-12 4.7E-17 89.1 6.6 74 74-152 43-116 (137)
41 KOG2903 Predicted glutathione 99.4 9.8E-13 2.1E-17 97.3 5.0 93 69-161 202-298 (319)
42 cd03187 GST_C_Phi GST_C family 99.3 2.1E-12 4.6E-17 86.3 6.1 74 69-148 44-117 (118)
43 cd03177 GST_C_Delta_Epsilon GS 99.3 3.3E-12 7.1E-17 85.7 6.9 76 69-151 37-112 (118)
44 PF13410 GST_C_2: Glutathione 99.3 4.1E-12 8.8E-17 77.3 6.5 65 69-138 5-69 (69)
45 cd03183 GST_C_Theta GST_C fami 99.3 4.7E-12 1E-16 85.8 7.2 75 69-149 44-120 (126)
46 cd03178 GST_C_Ure2p_like GST_C 99.3 3.5E-12 7.6E-17 84.7 6.0 74 69-149 39-112 (113)
47 cd03061 GST_N_CLIC GST_N famil 99.3 4.5E-12 9.8E-17 81.1 5.7 47 2-49 5-51 (91)
48 cd03206 GST_C_7 GST_C family, 99.3 1.1E-11 2.3E-16 80.8 7.5 69 69-145 32-100 (100)
49 cd03182 GST_C_GTT2_like GST_C 99.3 1.2E-11 2.5E-16 82.6 7.8 70 69-145 48-117 (117)
50 cd03180 GST_C_2 GST_C family, 99.3 1.6E-11 3.5E-16 80.9 7.7 69 69-145 42-110 (110)
51 PLN02907 glutamate-tRNA ligase 99.3 3.1E-11 6.8E-16 102.7 10.6 129 1-144 1-159 (722)
52 PF14497 GST_C_3: Glutathione 99.3 1.3E-11 2.8E-16 80.4 6.5 66 69-141 34-99 (99)
53 cd03181 GST_C_EFB1gamma GST_C 99.3 9E-12 2E-16 83.9 5.0 80 69-153 39-118 (123)
54 cd03189 GST_C_GTT1_like GST_C 99.2 3.7E-11 8E-16 80.5 7.4 67 69-143 53-119 (119)
55 cd03202 GST_C_etherase_LigE GS 99.2 6.7E-11 1.4E-15 80.3 7.4 67 69-141 57-123 (124)
56 cd03194 GST_C_3 GST_C family, 99.2 1.1E-10 2.3E-15 78.1 7.1 72 69-149 40-112 (114)
57 cd03195 GST_C_4 GST_C family, 99.2 1.3E-10 2.9E-15 77.6 7.3 71 69-149 41-111 (114)
58 KOG4244 Failed axon connection 99.1 1.1E-10 2.4E-15 86.8 5.9 70 69-142 202-273 (281)
59 cd00299 GST_C_family Glutathio 99.0 8.4E-10 1.8E-14 71.0 6.6 66 69-139 35-100 (100)
60 cd03193 GST_C_Metaxin GST_C fa 99.0 1.4E-09 3.1E-14 69.1 6.9 67 70-140 19-88 (88)
61 cd03179 GST_C_1 GST_C family, 99.0 7.6E-10 1.6E-14 72.3 5.7 64 69-140 42-105 (105)
62 cd03192 GST_C_Sigma_like GST_C 99.0 1.8E-09 3.8E-14 70.6 6.5 66 69-139 38-104 (104)
63 cd03197 GST_C_mPGES2 GST_C fam 99.0 1.5E-09 3.3E-14 75.2 6.3 67 69-141 78-145 (149)
64 cd03200 GST_C_JTV1 GST_C famil 99.0 3E-09 6.6E-14 68.9 6.7 59 73-142 38-96 (96)
65 COG2999 GrxB Glutaredoxin 2 [P 98.9 1.1E-08 2.3E-13 72.1 8.1 66 70-145 142-207 (215)
66 cd03205 GST_C_6 GST_C family, 98.8 3.3E-08 7.2E-13 64.1 6.6 63 69-139 36-98 (98)
67 cd03211 GST_C_Metaxin2 GST_C f 98.7 1.4E-08 3E-13 69.1 4.2 69 69-140 56-126 (126)
68 cd03038 GST_N_etherase_LigE GS 98.7 2.8E-08 6.1E-13 62.6 5.3 44 3-48 1-44 (84)
69 cd03080 GST_N_Metaxin_like GST 98.7 4.8E-08 1E-12 60.3 5.0 42 2-45 1-42 (75)
70 cd03212 GST_C_Metaxin1_3 GST_C 98.6 1.1E-07 2.5E-12 65.5 6.8 69 69-141 63-134 (137)
71 cd03060 GST_N_Omega_like GST_N 98.6 8.9E-08 1.9E-12 58.4 3.9 34 15-48 4-37 (71)
72 cd03054 GST_N_Metaxin GST_N fa 98.5 2.3E-07 4.9E-12 56.7 5.1 41 3-45 1-41 (72)
73 cd03037 GST_N_GRX2 GST_N famil 98.4 4E-07 8.7E-12 55.4 3.6 30 15-44 4-33 (71)
74 PF13417 GST_N_3: Glutathione 98.4 1.6E-07 3.5E-12 57.9 1.4 33 15-47 2-34 (75)
75 cd03059 GST_N_SspA GST_N famil 98.3 1.1E-06 2.5E-11 53.4 3.7 32 16-47 5-36 (73)
76 PF13409 GST_N_2: Glutathione 98.2 9.3E-07 2E-11 53.8 2.9 26 19-44 1-26 (70)
77 cd03051 GST_N_GTT2_like GST_N 98.2 1.6E-06 3.6E-11 52.7 3.8 31 16-46 5-35 (74)
78 cd03043 GST_N_1 GST_N family, 98.2 2E-06 4.3E-11 52.7 4.0 32 15-46 5-36 (73)
79 cd03058 GST_N_Tau GST_N family 98.2 2.3E-06 5E-11 52.4 3.8 32 16-47 5-36 (74)
80 cd03041 GST_N_2GST_N GST_N fam 98.2 2.2E-06 4.8E-11 53.0 3.6 33 2-43 1-33 (77)
81 cd03045 GST_N_Delta_Epsilon GS 98.2 3.9E-06 8.4E-11 51.2 4.6 31 17-47 6-36 (74)
82 cd03055 GST_N_Omega GST_N fami 98.2 4.1E-06 8.8E-11 53.3 4.7 31 17-47 24-54 (89)
83 cd03052 GST_N_GDAP1 GST_N fami 98.1 4.3E-06 9.4E-11 51.3 4.4 29 18-46 7-35 (73)
84 cd03040 GST_N_mPGES2 GST_N fam 98.1 3.6E-06 7.7E-11 51.9 3.3 28 18-45 8-35 (77)
85 cd03056 GST_N_4 GST_N family, 98.1 8.6E-06 1.9E-10 49.4 4.6 31 16-46 5-35 (73)
86 cd00570 GST_N_family Glutathio 98.0 9.1E-06 2E-10 48.2 4.5 30 18-47 7-36 (71)
87 cd03048 GST_N_Ure2p_like GST_N 98.0 1.1E-05 2.4E-10 50.2 4.8 35 2-46 1-35 (81)
88 cd03039 GST_N_Sigma_like GST_N 98.0 7.3E-06 1.6E-10 49.8 3.5 35 3-46 1-35 (72)
89 cd03049 GST_N_3 GST_N family, 98.0 1.1E-05 2.4E-10 49.2 4.0 32 16-47 5-38 (73)
90 cd03053 GST_N_Phi GST_N family 97.9 1.9E-05 4.2E-10 48.4 4.7 30 17-46 7-36 (76)
91 cd03050 GST_N_Theta GST_N fami 97.9 1.7E-05 3.7E-10 48.7 4.3 31 17-47 6-36 (76)
92 COG0695 GrxC Glutaredoxin and 97.9 2.6E-05 5.7E-10 48.7 4.8 37 1-46 1-37 (80)
93 cd03047 GST_N_2 GST_N family, 97.9 2.8E-05 6E-10 47.4 4.6 27 19-45 8-34 (73)
94 PF14834 GST_C_4: Glutathione 97.8 6.3E-05 1.4E-09 49.6 5.7 72 69-150 42-113 (117)
95 cd03044 GST_N_EF1Bgamma GST_N 97.8 2.7E-05 5.8E-10 47.8 3.5 31 15-45 4-34 (75)
96 PF04399 Glutaredoxin2_C: Glut 97.8 0.00011 2.4E-09 50.1 6.9 67 69-145 58-124 (132)
97 cd03076 GST_N_Pi GST_N family, 97.8 3.9E-05 8.4E-10 46.9 4.2 34 3-45 2-35 (73)
98 cd03042 GST_N_Zeta GST_N famil 97.8 4.2E-05 9.2E-10 46.3 4.2 29 18-46 7-35 (73)
99 PRK10329 glutaredoxin-like pro 97.7 4.9E-05 1.1E-09 47.6 3.8 34 1-43 1-34 (81)
100 PRK10638 glutaredoxin 3; Provi 97.7 4E-05 8.6E-10 48.1 3.3 32 3-43 4-35 (83)
101 cd03199 GST_C_GRX2 GST_C famil 97.6 0.00028 6.1E-09 47.8 6.9 66 70-145 60-125 (128)
102 cd03077 GST_N_Alpha GST_N fami 97.6 0.00012 2.5E-09 45.5 4.4 33 3-44 2-34 (79)
103 cd03057 GST_N_Beta GST_N famil 97.6 0.00012 2.6E-09 44.9 4.0 34 3-46 1-34 (77)
104 cd03075 GST_N_Mu GST_N family, 97.5 0.00021 4.5E-09 44.7 4.6 34 4-46 2-35 (82)
105 PF02798 GST_N: Glutathione S- 97.5 6.7E-05 1.5E-09 46.2 2.2 36 1-47 1-36 (76)
106 cd03027 GRX_DEP Glutaredoxin ( 97.5 0.00013 2.7E-09 44.5 3.3 32 3-43 3-34 (73)
107 cd03046 GST_N_GTT1_like GST_N 97.4 0.00027 5.8E-09 43.1 4.0 33 3-45 1-33 (76)
108 TIGR02190 GlrX-dom Glutaredoxi 97.4 0.00027 5.9E-09 43.8 4.0 34 1-43 8-41 (79)
109 TIGR02194 GlrX_NrdH Glutaredox 97.4 0.00021 4.6E-09 43.4 3.3 28 16-43 5-32 (72)
110 KOG3027 Mitochondrial outer me 97.3 0.00042 9.1E-09 50.4 4.8 70 69-142 176-248 (257)
111 cd03029 GRX_hybridPRX5 Glutare 97.3 0.00029 6.3E-09 42.8 3.3 26 18-43 9-34 (72)
112 PF00462 Glutaredoxin: Glutare 97.2 0.00024 5.2E-09 41.5 2.4 28 17-44 6-33 (60)
113 cd03418 GRX_GRXb_1_3_like Glut 97.2 0.00037 7.9E-09 42.4 3.3 27 17-43 7-33 (75)
114 TIGR02181 GRX_bact Glutaredoxi 97.2 0.00045 9.8E-09 42.6 3.3 28 16-43 5-32 (79)
115 TIGR00365 monothiol glutaredox 97.2 0.00052 1.1E-08 44.4 3.6 28 16-43 23-50 (97)
116 TIGR02189 GlrX-like_plant Glut 97.2 0.00046 1E-08 44.8 3.3 26 18-43 16-41 (99)
117 cd03078 GST_N_Metaxin1_like GS 97.1 0.0015 3.2E-08 40.0 4.7 38 3-42 1-38 (73)
118 COG1393 ArsC Arsenate reductas 97.1 0.00081 1.7E-08 45.1 3.8 33 1-42 1-33 (117)
119 cd02976 NrdH NrdH-redoxin (Nrd 97.0 0.001 2.2E-08 39.8 3.3 29 16-44 6-34 (73)
120 KOG3028 Translocase of outer m 97.0 0.0092 2E-07 46.1 9.0 70 69-142 162-234 (313)
121 cd03028 GRX_PICOT_like Glutare 96.9 0.0021 4.6E-08 40.9 4.6 28 16-43 19-46 (90)
122 cd02066 GRX_family Glutaredoxi 96.9 0.0011 2.4E-08 39.4 3.1 26 18-43 8-33 (72)
123 PRK10824 glutaredoxin-4; Provi 96.8 0.0028 6.1E-08 42.3 4.8 33 9-43 21-53 (115)
124 PHA03050 glutaredoxin; Provisi 96.7 0.0019 4.1E-08 42.6 3.3 28 16-43 19-49 (108)
125 TIGR02200 GlrX_actino Glutared 96.6 0.0024 5.2E-08 38.8 3.1 27 17-43 7-33 (77)
126 PRK01655 spxA transcriptional 96.5 0.0035 7.5E-08 42.8 3.6 32 3-43 2-33 (131)
127 PRK11200 grxA glutaredoxin 1; 96.5 0.0047 1E-07 38.7 3.9 34 1-43 1-39 (85)
128 cd03032 ArsC_Spx Arsenate Redu 96.4 0.0042 9.2E-08 41.4 3.6 32 2-42 1-32 (115)
129 cd03036 ArsC_like Arsenate Red 96.4 0.0033 7.2E-08 41.6 3.0 28 16-43 5-32 (111)
130 TIGR02196 GlrX_YruB Glutaredox 96.4 0.0054 1.2E-07 36.5 3.6 27 17-43 7-33 (74)
131 PRK10026 arsenate reductase; P 96.4 0.0052 1.1E-07 42.5 3.7 32 2-42 3-34 (141)
132 cd03419 GRX_GRXh_1_2_like Glut 96.3 0.0057 1.2E-07 37.6 3.6 30 17-46 7-36 (82)
133 cd02977 ArsC_family Arsenate R 96.3 0.0052 1.1E-07 40.1 3.3 28 16-43 5-32 (105)
134 PRK12559 transcriptional regul 96.2 0.0064 1.4E-07 41.5 3.6 33 2-43 1-33 (131)
135 PRK13344 spxA transcriptional 96.0 0.0081 1.8E-07 41.1 3.4 33 2-43 1-33 (132)
136 PRK10853 putative reductase; P 96.0 0.0077 1.7E-07 40.4 3.2 32 2-42 1-32 (118)
137 cd03033 ArsC_15kD Arsenate Red 96.0 0.01 2.2E-07 39.5 3.5 32 2-42 1-32 (113)
138 TIGR02180 GRX_euk Glutaredoxin 95.8 0.013 2.8E-07 36.1 3.4 30 16-45 5-36 (84)
139 TIGR01616 nitro_assoc nitrogen 95.6 0.017 3.8E-07 39.1 3.6 32 2-42 2-33 (126)
140 cd03035 ArsC_Yffb Arsenate Red 95.6 0.014 3.1E-07 38.3 3.1 32 3-43 1-32 (105)
141 TIGR02183 GRXA Glutaredoxin, G 95.6 0.015 3.2E-07 36.6 3.0 27 17-43 7-38 (86)
142 cd03079 GST_N_Metaxin2 GST_N f 95.5 0.017 3.7E-07 35.4 3.0 28 15-42 12-39 (74)
143 TIGR01617 arsC_related transcr 95.4 0.019 4.2E-07 38.3 3.1 28 16-43 5-32 (117)
144 PRK12759 bifunctional gluaredo 95.0 0.024 5.2E-07 46.1 3.3 32 3-43 4-35 (410)
145 TIGR00014 arsC arsenate reduct 94.9 0.034 7.4E-07 37.0 3.2 31 3-42 1-31 (114)
146 KOG1147 Glutamyl-tRNA syntheta 94.9 0.02 4.4E-07 47.5 2.5 61 73-138 91-151 (712)
147 cd03034 ArsC_ArsC Arsenate Red 94.7 0.039 8.4E-07 36.5 3.2 31 3-42 1-31 (112)
148 PTZ00062 glutaredoxin; Provisi 94.2 0.098 2.1E-06 38.5 4.6 28 16-43 124-151 (204)
149 cd03031 GRX_GRX_like Glutaredo 93.7 0.088 1.9E-06 36.7 3.4 39 3-44 2-40 (147)
150 KOG1752 Glutaredoxin and relat 91.7 0.26 5.7E-06 32.2 3.3 27 18-44 22-48 (104)
151 PF11801 Tom37_C: Tom37 C-term 91.1 1.2 2.7E-05 31.7 6.5 40 75-114 113-154 (168)
152 cd02973 TRX_GRX_like Thioredox 87.5 0.41 8.9E-06 28.0 1.7 15 19-33 10-24 (67)
153 COG5515 Uncharacterized conser 86.6 0.94 2E-05 26.4 2.7 27 1-32 1-27 (70)
154 PF04908 SH3BGR: SH3-binding, 85.4 0.78 1.7E-05 29.7 2.2 41 1-44 1-41 (99)
155 cd03030 GRX_SH3BGR Glutaredoxi 85.0 1.3 2.9E-05 28.2 3.2 22 23-44 19-40 (92)
156 TIGR00412 redox_disulf_2 small 84.5 2.3 5.1E-05 25.7 4.1 25 19-43 9-37 (76)
157 COG0278 Glutaredoxin-related p 81.8 3.6 7.9E-05 26.7 4.1 27 16-42 26-53 (105)
158 PF03960 ArsC: ArsC family; I 80.3 1.7 3.7E-05 28.4 2.4 27 16-42 2-28 (110)
159 PF05768 DUF836: Glutaredoxin- 77.5 2.6 5.7E-05 25.9 2.5 39 2-49 1-41 (81)
160 cd01659 TRX_superfamily Thiore 68.4 6.2 0.00013 21.2 2.5 27 17-43 6-37 (69)
161 PHA02125 thioredoxin-like prot 64.2 4.5 9.8E-05 24.3 1.4 31 17-49 7-37 (75)
162 TIGR00411 redox_disulf_1 small 64.0 8.8 0.00019 22.9 2.7 32 18-49 9-44 (82)
163 COG4545 Glutaredoxin-related p 56.3 14 0.0003 22.7 2.5 25 19-43 11-35 (85)
164 cd03026 AhpF_NTD_C TRX-GRX-lik 52.0 12 0.00026 23.4 1.9 25 18-42 22-51 (89)
165 KOG1668 Elongation factor 1 be 51.5 8.2 0.00018 28.9 1.1 58 76-145 10-67 (231)
166 KOG3425 Uncharacterized conser 51.3 74 0.0016 21.5 5.7 46 4-49 29-78 (128)
167 COG1102 Cmk Cytidylate kinase 46.9 19 0.00041 25.8 2.3 28 1-37 1-28 (179)
168 PF04827 Plant_tran: Plant tra 46.5 1.1E+02 0.0025 22.5 6.3 63 50-112 120-194 (205)
169 cd04911 ACT_AKiii-YclM-BS_1 AC 45.7 26 0.00056 21.5 2.6 21 22-42 17-37 (76)
170 PHA03075 glutaredoxin-like pro 40.0 34 0.00073 22.9 2.5 28 18-45 11-38 (123)
171 cd02975 PfPDO_like_N Pyrococcu 39.6 21 0.00046 23.2 1.7 33 17-49 31-66 (113)
172 PRK11657 dsbG disulfide isomer 36.8 33 0.00071 26.0 2.5 25 18-42 127-155 (251)
173 PF13098 Thioredoxin_2: Thiore 35.4 21 0.00045 22.7 1.1 14 18-31 15-28 (112)
174 PF10568 Tom37: Outer mitochon 34.6 1E+02 0.0023 18.4 4.1 28 16-43 10-40 (72)
175 cd03020 DsbA_DsbC_DsbG DsbA fa 34.6 38 0.00083 24.3 2.5 26 18-43 87-114 (197)
176 PF15608 PELOTA_1: PELOTA RNA 32.8 59 0.0013 21.1 2.8 23 19-41 65-87 (100)
177 TIGR01162 purE phosphoribosyla 30.9 61 0.0013 22.8 2.8 30 20-49 11-40 (156)
178 TIGR00106 uncharacterized prot 30.9 1.1E+02 0.0024 19.5 3.9 39 2-42 2-40 (97)
179 KOG0911 Glutaredoxin-related p 28.5 1.1E+02 0.0023 23.1 3.8 27 16-42 150-176 (227)
180 cd02978 KaiB_like KaiB-like fa 28.2 1.4E+02 0.0031 18.0 4.1 38 3-49 4-46 (72)
181 COG2879 Uncharacterized small 28.0 69 0.0015 18.9 2.3 12 130-141 23-34 (65)
182 PF00731 AIRC: AIR carboxylase 27.9 46 0.001 23.3 1.8 30 20-49 13-42 (150)
183 PRK10877 protein disulfide iso 27.6 58 0.0013 24.3 2.5 15 18-32 117-131 (232)
184 cd02972 DsbA_family DsbA famil 26.8 55 0.0012 19.5 2.0 27 18-44 7-39 (98)
185 PF09413 DUF2007: Domain of un 26.4 52 0.0011 19.0 1.7 31 4-43 2-32 (67)
186 PF04134 DUF393: Protein of un 25.4 1E+02 0.0022 19.7 3.1 27 18-44 5-31 (114)
187 PHA03420 E4 protein; Provision 25.0 1.1E+02 0.0023 20.6 3.0 31 1-34 1-31 (137)
188 PF13192 Thioredoxin_3: Thiore 24.7 64 0.0014 19.2 1.9 23 20-42 10-36 (76)
189 COG0011 Uncharacterized conser 24.0 1.5E+02 0.0033 19.2 3.5 38 3-42 5-42 (100)
190 TIGR01295 PedC_BrcD bacterioci 23.7 60 0.0013 21.5 1.8 27 17-43 32-62 (122)
191 PF00392 GntR: Bacterial regul 22.3 1.2E+02 0.0026 17.2 2.7 30 76-107 3-33 (64)
192 PRK13728 conjugal transfer pro 21.3 1.1E+02 0.0024 22.1 2.8 28 18-47 79-110 (181)
193 cd06891 PX_Vps17p The phosphoi 20.7 74 0.0016 22.0 1.7 20 128-147 110-129 (140)
194 PF03490 Varsurf_PPLC: Variant 20.5 88 0.0019 17.5 1.7 18 1-18 22-39 (51)
195 PRK15317 alkyl hydroperoxide r 20.4 1.6E+02 0.0035 24.7 4.0 42 2-49 119-160 (517)
No 1
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.97 E-value=2e-30 Score=193.36 Aligned_cols=162 Identities=28% Similarity=0.552 Sum_probs=130.1
Q ss_pred ceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecCCCCCC--------------------------------
Q 031123 2 AVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQ-------------------------------- 49 (165)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~kp~-------------------------------- 49 (165)
.|+||+++|+++ .+.+.||||+||+++|.+|||+|+.+.+|+.++++
T Consensus 2 ~~el~~ka~~~~-~~~~~cp~~~rv~i~L~ekgi~~e~~~vd~~~~~~~fl~inP~g~vPvL~~~g~~l~ES~aI~eYL~ 80 (236)
T TIGR00862 2 EIELFVKAGSDG-ESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPEDLQNLAPGTHPPFLTYNTEVKTDVNKIEEFLE 80 (236)
T ss_pred ceEEEEecCCCC-CcCCCCHhHHHHHHHHHHcCCCcEEEEECCCCCCHHHHHHCcCCCCCEEEECCEEeecHHHHHHHHH
Confidence 489999998654 89999999999999999999999999999988754
Q ss_pred --CCCC------------------ccHHHHhhhhCCCCc--hhHHHHHHHHHHHHHHHHhh----------------CCC
Q 031123 50 --CGSK------------------IFPSFVNFLKSKDPN--DGTEQALLEELKALDEHLKT----------------HGG 91 (165)
Q Consensus 50 --~~~~------------------~~~~~~~~~~~~~~~--~~~~~~~~~~l~~le~~L~~----------------~~~ 91 (165)
.... +++.+..++.+..+. +...+.+.+.++.||+.|.+ +++
T Consensus 81 e~~~~~~~p~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~ 160 (236)
T TIGR00862 81 ETLCPPRYPKLSPKHPESNTAGLDIFAKFSAYIKNSNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRR 160 (236)
T ss_pred HHcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccCC
Confidence 1111 122222223232221 33445688999999999963 137
Q ss_pred CcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccccccCCchHHHHHHhccccc
Q 031123 92 PFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKAEKQYVIAGWVPKVN 164 (165)
Q Consensus 92 ~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~~~~~~~~~~~~~~~~~ 164 (165)
+|++|+++|+|||+++|.+.++..+..++.++++++++|+|.+|++++.++|+|+.+++.++.++++|.+++|
T Consensus 161 ~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~i~~~~p~l~~w~~~~~~~~sf~~t~p~~~~i~~~~~~~~~ 233 (236)
T TIGR00862 161 KFLDGDELTLADCNLLPKLHIVKVVAKKYRNFDIPAEFTGVWRYLSNAYAREEFTNTCPDDKEIELAYADVAK 233 (236)
T ss_pred CcccCCccchhhHHHHHHHHHHHHHHHHHhCcCccccCchHHHHHHHHhccchHHhhCCChHHHHHHHHHHhh
Confidence 9999999999999999999999853345567787899999999999999999999999999999999999865
No 2
>PLN02378 glutathione S-transferase DHAR1
Probab=99.96 E-value=1.3e-28 Score=182.00 Aligned_cols=164 Identities=73% Similarity=1.173 Sum_probs=129.1
Q ss_pred CceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecCCCCCC-------------------------------
Q 031123 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQ------------------------------- 49 (165)
Q Consensus 1 ~~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~kp~------------------------------- 49 (165)
|.|+||++++-.+..+++.||||+||+++|+++|++|+.+.||+.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~l~inP~G~VPvL~~~~~~l~ES~aI~~YL 80 (213)
T PLN02378 1 MALEICVKAAVGAPDHLGDCPFSQRALLTLEEKSLTYKIHLINLSDKPQWFLDISPQGKVPVLKIDDKWVTDSDVIVGIL 80 (213)
T ss_pred CceehhhhccCCCCCCCCCCcchHHHHHHHHHcCCCCeEEEeCcccCCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHH
Confidence 8899999999999889999999999999999999999999999987764
Q ss_pred ---CC-CCcc-------------HHHHhhhhCCCCchhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHH
Q 031123 50 ---CG-SKIF-------------PSFVNFLKSKDPNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYH 112 (165)
Q Consensus 50 ---~~-~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~ 112 (165)
.. ..+. +.+..++......+...+.+.+.|+.||+.|++++++|++|+++|+||+++++++.+
T Consensus 81 ~~~~~~~~l~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~ 160 (213)
T PLN02378 81 EEKYPDPPLKTPAEFASVGSNIFGTFGTFLKSKDSNDGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYH 160 (213)
T ss_pred HHhCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHH
Confidence 10 0111 111111122222234456778899999999974347999999999999999999988
Q ss_pred HHHHhhhccCCCCCccchHHHHHHHHhhcCccccccCCchHHHHHHhccccc
Q 031123 113 LQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKAEKQYVIAGWVPKVN 164 (165)
Q Consensus 113 ~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~~~~~~~~~~~~~~~~~ 164 (165)
+....+.+..+++.++||+|.+|+++|.++|+++++.+.....++.|....|
T Consensus 161 l~~~~~~~~~~~~~~~~p~l~~w~~~~~~rpa~~~~~~~~~~~~~~~~~~~~ 212 (213)
T PLN02378 161 LQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFEKTKTEEKYVISGWAPKVN 212 (213)
T ss_pred HHHHHHHhcCCCchhHhHHHHHHHHHHhcCCCeecccCChHHHHHHHHhhcC
Confidence 7642333334444578999999999999999999999999999999988776
No 3
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.96 E-value=2.2e-28 Score=174.33 Aligned_cols=161 Identities=44% Similarity=0.767 Sum_probs=144.5
Q ss_pred CceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecCCCCCC-------------------------------
Q 031123 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQ------------------------------- 49 (165)
Q Consensus 1 ~~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~kp~------------------------------- 49 (165)
|.|+||+++|++++.+.+.||||||+-|.|.++|++|+...||+.++|+
T Consensus 2 p~iel~vkA~s~~~~~~Gdcpf~qr~~m~L~~k~~~f~vttVd~~~kp~~f~~~sp~~~~P~l~~d~~~~tDs~~Ie~~L 81 (221)
T KOG1422|consen 2 PEIELCVKAGSDGPDSLGDCPFCQRLFMTLELKGVPFKVTTVDLSRKPEWFLDISPGGKPPVLKFDEKWVTDSDKIEEFL 81 (221)
T ss_pred CceEEEEEeccCCcccCCCChhHHHHHHHHHHcCCCceEEEeecCCCcHHHHhhCCCCCCCeEEeCCceeccHHHHHHHH
Confidence 5799999999999999999999999999999999999999999999887
Q ss_pred -------------------CCCCccHHHHhhhhCCCC-c-hhHHHHHHHHHHHHHHHHhh-CCCCcccCCCCChhhHHHH
Q 031123 50 -------------------CGSKIFPSFVNFLKSKDP-N-DGTEQALLEELKALDEHLKT-HGGPFIAGEKVTAVDLSLA 107 (165)
Q Consensus 50 -------------------~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~~le~~L~~-~~~~~l~G~~~T~AD~~l~ 107 (165)
.+++++..|..++....+ . +...+.+-+.|..|++.|+. +.++|+.|+++|.||+.++
T Consensus 82 ee~l~~p~~~~~~~~E~asag~diF~kF~~fi~ksk~~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLl 161 (221)
T KOG1422|consen 82 EEKLPPPKLPTLAPPESASAGSDIFAKFSAFIKKSKDAANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLL 161 (221)
T ss_pred HHhcCCCCCcccCCHHHHhhHHHHHHHHHHHHhCchhhccchHHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhc
Confidence 445666667666544433 2 55566788889999999986 4589999999999999999
Q ss_pred hHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccccccCCchHHHHHHhcc
Q 031123 108 PKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKAEKQYVIAGWVP 161 (165)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~~~~~~~~~~~~~~ 161 (165)
|-|+.++.+++++.+|+++++.+++++|+..+.++.+|..+++++++|+.+|..
T Consensus 162 PKL~~i~va~k~yk~~~IP~~lt~V~rYl~~~ya~d~F~~tcp~d~ei~~~y~~ 215 (221)
T KOG1422|consen 162 PKLHHIKVAAKHYKNFEIPASLTGVWRYLKNAYARDEFTNTCPADQEIILAYAP 215 (221)
T ss_pred hhHHHHHHHHHHhcCCCCchhhhHHHHHHHHHHhHHHhhcCCchHHHHHHhhhh
Confidence 999999998999999999999999999999999999999999999999999986
No 4
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.94 E-value=1e-26 Score=176.61 Aligned_cols=161 Identities=58% Similarity=1.054 Sum_probs=123.9
Q ss_pred eEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecCCCCCC---------------------------------
Q 031123 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQ--------------------------------- 49 (165)
Q Consensus 3 ~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~kp~--------------------------------- 49 (165)
++++++++.-++++.+.||||+||+++|+++||+|+.+.+|+.++++
T Consensus 56 ~~~~~~~~~~~~~~~g~cp~s~rV~i~L~ekgi~ye~~~vdl~~~~~~fl~iNP~GkVPvL~~d~~~L~ES~aI~~YL~e 135 (265)
T PLN02817 56 LEVCVKASLTVPNKLGDCPFCQRVLLTLEEKHLPYDMKLVDLTNKPEWFLKISPEGKVPVVKLDEKWVADSDVITQALEE 135 (265)
T ss_pred HHHHHhcccCCCCcCCCCcHHHHHHHHHHHcCCCCEEEEeCcCcCCHHHHhhCCCCCCCEEEECCEEEecHHHHHHHHHH
Confidence 34566777767778899999999999999999999999999877554
Q ss_pred -CC-CC-------------ccHHHHhhhhCCCCchhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHH
Q 031123 50 -CG-SK-------------IFPSFVNFLKSKDPNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQ 114 (165)
Q Consensus 50 -~~-~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~ 114 (165)
.. .. +++.+..++..+++.++..+.+.+.++.||+.|+++ ++|++|+++|+||++++|.+.++.
T Consensus 136 ~~p~~~L~~~~era~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~LE~~L~~~-g~yl~Gd~~SlADi~l~p~L~~l~ 214 (265)
T PLN02817 136 KYPDPPLATPPEKASVGSKIFSTFIGFLKSKDPGDGTEQALLDELTSFDDYIKEN-GPFINGEKISAADLSLGPKLYHLE 214 (265)
T ss_pred HCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHhcC-CCeeCCCCCCHHHHHHHHHHHHHH
Confidence 00 01 111122222222222334466788899999999743 699999999999999999998886
Q ss_pred HHhhhccCCCCCccchHHHHHHHHhhcCccccccCCchHHHHHHhccccc
Q 031123 115 VALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKAEKQYVIAGWVPKVN 164 (165)
Q Consensus 115 ~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~~~~~~~~~~~~~~~~~ 164 (165)
...+.+.++++.+.+|+|.+|++++.++|+|+++.+..+.++++|.++++
T Consensus 215 ~~~~~~~~~~i~~~~P~L~~w~~ri~~rps~~~~~~~~~~~~~~~~~~~~ 264 (265)
T PLN02817 215 IALGHYKNWSVPDSLPFVKSYMKNIFSMESFVKTRALPEDVIAGWRPKVM 264 (265)
T ss_pred HHHHHhcCCCccccCHHHHHHHHHHhcchhHhhcCCCHHHHHHHhHhhhc
Confidence 53343445555688999999999999999999999999999999998765
No 5
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=3.4e-25 Score=162.40 Aligned_cols=151 Identities=23% Similarity=0.364 Sum_probs=117.7
Q ss_pred CCCCCCCCcHHHHHHHHHHhCCCCceEEeecCCCCCC------------------------------------C-CCCcc
Q 031123 13 APDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQ------------------------------------C-GSKIF 55 (165)
Q Consensus 13 ~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~kp~------------------------------------~-~~~~~ 55 (165)
-.++|++|||++|++|+|++|||+||++.+|+.+||+ - +..++
T Consensus 11 rL~~~w~sPfa~R~~iaL~~KgI~yE~veedl~~Ks~~ll~~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~~~~iL 90 (231)
T KOG0406|consen 11 KLLGMWFSPFAQRVRIALKLKGIPYEYVEEDLTNKSEWLLEKNPVHKKVPVLEHNGKPICESLIIVEYIDETWPSGPPIL 90 (231)
T ss_pred EEEEeecChHHHHHHHHHHhcCCceEEEecCCCCCCHHHHHhccccccCCEEEECCceehhhHHHHHHHHhhccCCCCCC
Confidence 3568999999999999999999999999999998877 1 22222
Q ss_pred HH---------HH-------------hhhh-CCCCc-hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHH
Q 031123 56 PS---------FV-------------NFLK-SKDPN-DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLY 111 (165)
Q Consensus 56 ~~---------~~-------------~~~~-~~~~~-~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~ 111 (165)
|. +. .... .++++ +...+++.+.|..||+.|.+ +++|++|+++++.|++++|.+.
T Consensus 91 P~DPy~Ra~arfwa~~id~~~~~~~~~~~~~~~~e~~~~~~~e~~e~l~~lE~el~k-~k~~fgG~~~G~vDi~~~p~~~ 169 (231)
T KOG0406|consen 91 PSDPYERAQARFWAEYIDKKVFFVGRFVVAAKGGEEQEAAKEELREALKVLEEELGK-GKDFFGGETIGFVDIAIGPSFE 169 (231)
T ss_pred CCCHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCCcCHhhhhHHhhHH
Confidence 21 10 0111 12222 56678899999999999974 4899999999999999998888
Q ss_pred HHHHHhhhcc--CCCCCccchHHHHHHHHhhcCccccccCCchHHHHHHhccccc
Q 031123 112 HLQVALEHFK--QWTVPESLAHVHGYTKKLFALESFQKTKAEKQYVIAGWVPKVN 164 (165)
Q Consensus 112 ~~~~~~~~~~--~~~~~~~~p~l~~w~~ri~~~p~~~~~~~~~~~~~~~~~~~~~ 164 (165)
++....-.+. .+....++|+|.+|.+||.++|++++++++.+.+++++++++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~~V~~~~p~~e~~~e~~~~~~~ 224 (231)
T KOG0406|consen 170 RWLAVLEKFGGVKFIIEEETPKLIKWIKRMKEDEAVKAVLPDSEKVVEFMKKYRQ 224 (231)
T ss_pred HHHHHHHHhcCcccCCCCCCccHHHHHHHHhcChhHHhhcCCHHHHHHHHHHHHH
Confidence 7764332233 2333589999999999999999999999999999999988754
No 6
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.86 E-value=3.3e-21 Score=142.10 Aligned_cols=133 Identities=23% Similarity=0.374 Sum_probs=97.0
Q ss_pred CCCCcHHHHHHHHHHhCCCCceEEeecCCCCCC----------------------------------CC-CCccHH----
Q 031123 17 LGDCPFSQRALLTLEEKKVPYKRHLINISDKPQ----------------------------------CG-SKIFPS---- 57 (165)
Q Consensus 17 ~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~kp~----------------------------------~~-~~~~~~---- 57 (165)
++.||||+||+++|+++||+||.+.+|+.++++ +. ..++|.
T Consensus 16 ~~~s~~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~nP~g~VPvL~~~g~~l~ES~AIl~YL~~~~~~~~l~p~~~~~ 95 (211)
T PRK09481 16 GPTDIYSHQVRIVLAEKGVSVEIEQVEKDNLPQDLIDLNPYQSVPTLVDRELTLYESRIIMEYLDERFPHPPLMPVYPVA 95 (211)
T ss_pred CCCChhHHHHHHHHHHCCCCCEEEeCCcccCCHHHHHhCCCCCCCEEEECCEEeeCHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 345677999999999999999999999876653 11 112210
Q ss_pred ------H--------Hhh---hhCCCCc--hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhh
Q 031123 58 ------F--------VNF---LKSKDPN--DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALE 118 (165)
Q Consensus 58 ------~--------~~~---~~~~~~~--~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~ 118 (165)
+ ... +...++. +...+.+.+.++.+|+.|++ ++|++|+++|+||+++++.+.++.. .
T Consensus 96 ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~--~~~l~G~~~t~AD~~l~~~~~~~~~-~- 171 (211)
T PRK09481 96 RGESRLMMHRIEKDWYSLMNKIVNGSASEADAARKQLREELLAIAPVFGE--KPYFMSEEFSLVDCYLAPLLWRLPV-L- 171 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhcc--CCcccCCCccHHHHHHHHHHHHHHh-c-
Confidence 0 000 1111111 44566788899999999963 7999999999999999999877653 2
Q ss_pred hccCCCCC-ccchHHHHHHHHhhcCccccccCCchHHHH
Q 031123 119 HFKQWTVP-ESLAHVHGYTKKLFALESFQKTKAEKQYVI 156 (165)
Q Consensus 119 ~~~~~~~~-~~~p~l~~w~~ri~~~p~~~~~~~~~~~~~ 156 (165)
++++. +.+|+|.+|++++.++|++++++.+.+..+
T Consensus 172 ---~~~~~~~~~p~l~~w~~~~~~rp~~~~~~~~~~~~~ 207 (211)
T PRK09481 172 ---GIELSGPGAKELKGYMTRVFERDSFLASLTEAEREM 207 (211)
T ss_pred ---CCCCCCCCChhHHHHHHHHhccHHHHHHcCHHHHHH
Confidence 33432 579999999999999999999988765543
No 7
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.84 E-value=2.6e-20 Score=127.39 Aligned_cols=112 Identities=28% Similarity=0.544 Sum_probs=94.2
Q ss_pred CCCCccHHHHhhhhCCCCc--hhHHHHHHHHHHHHHHHHhh--------------CCCCcccCCCCChhhHHHHhHHHHH
Q 031123 50 CGSKIFPSFVNFLKSKDPN--DGTEQALLEELKALDEHLKT--------------HGGPFIAGEKVTAVDLSLAPKLYHL 113 (165)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~le~~L~~--------------~~~~~l~G~~~T~AD~~l~~~l~~~ 113 (165)
.++++|+.|..++.+++++ +...+.+.+.|..||+.|.+ .+++|++|+++|+|||.++|.+.++
T Consensus 7 ~~~~~f~~~~~~~~~~~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~ 86 (134)
T cd03198 7 AGEDIFAKFSAYIKNSNPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIV 86 (134)
T ss_pred hHHHHHHHHHHHHcCCChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 3567889998888887665 66778899999999999975 2367999999999999999999888
Q ss_pred HHHhhhccCCCCCccchHHHHHHHHhhcCccccccCCchHHHHHHhcc
Q 031123 114 QVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKAEKQYVIAGWVP 161 (165)
Q Consensus 114 ~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~~~~~~~~~~~~~~ 161 (165)
..+.....++++++++|+|.+|++|+.++|+|+++++.++.|+++|+.
T Consensus 87 ~~~~~~~~g~~i~~~~P~L~aw~~ri~aRPsfk~t~~~~~~i~~~~~~ 134 (134)
T cd03198 87 KVVAKKYRNFEIPADLTGLWRYLKNAYQREEFTNTCPADQEIELAYKD 134 (134)
T ss_pred HHHHHhhcCCCccccCHHHHHHHHHHHCCHHHHHHcCCHHHHHHHhcC
Confidence 643323335565688999999999999999999999999999999973
No 8
>PLN02473 glutathione S-transferase
Probab=99.81 E-value=2.1e-19 Score=132.60 Aligned_cols=75 Identities=15% Similarity=0.220 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccccccCC
Q 031123 71 TEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKA 150 (165)
Q Consensus 71 ~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~~~ 150 (165)
..+.+.+.++.+|+.|++ ++|++|+++|+||+++++.+.++.. .... .++.+++|+|.+|++++.++|+++++..
T Consensus 136 ~~~~~~~~l~~le~~L~~--~~~l~Gd~~t~ADi~~~~~~~~~~~-~~~~--~~~~~~~P~l~~w~~~~~~~p~~~~~~~ 210 (214)
T PLN02473 136 LKVKFDKVLDVYENRLAT--NRYLGGDEFTLADLTHMPGMRYIMN-ETSL--SGLVTSRENLNRWWNEISARPAWKKLME 210 (214)
T ss_pred HHHHHHHHHHHHHHHhcc--CCcccCCCCCHHHHHHHHHHHHHHh-cccc--HHHHhcCHHHHHHHHHHhcChhhHHHHH
Confidence 456678899999999963 6899999999999999998887642 1111 1224789999999999999999998764
No 9
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.80 E-value=2.8e-19 Score=121.02 Aligned_cols=111 Identities=71% Similarity=1.152 Sum_probs=93.7
Q ss_pred CCCCccHHHHhhhhCCCCchhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccc
Q 031123 50 CGSKIFPSFVNFLKSKDPNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESL 129 (165)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~ 129 (165)
+++++++.++.++.++++.++..+.+.+.|..||+.|.++ ++|++|+++|+||++++|.+.++......+.++.+++.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Le~~L~~~-~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~ 88 (121)
T cd03201 10 VGSKIFSTFVGFLKSKDSNDGTEQALLDELEALEDHLKEN-GPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESL 88 (121)
T ss_pred HHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHhcC-CCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccc
Confidence 4567888899888887766667788999999999999742 689999999999999999988886533433445445899
Q ss_pred hHHHHHHHHhhcCccccccCCchHHHHHHhcc
Q 031123 130 AHVHGYTKKLFALESFQKTKAEKQYVIAGWVP 161 (165)
Q Consensus 130 p~l~~w~~ri~~~p~~~~~~~~~~~~~~~~~~ 161 (165)
|+|.+|++++.++|+|+++++..+.+++.|..
T Consensus 89 P~l~~w~~rl~~rps~~~t~~~~~~~~~~~~~ 120 (121)
T cd03201 89 TSVKSYMKALFSRESFVKTKAEKEDVIAGWAP 120 (121)
T ss_pred hHHHHHHHHHHCCchhhhcCCCHHHHHHHhcc
Confidence 99999999999999999999999999999975
No 10
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.78 E-value=9.5e-19 Score=127.77 Aligned_cols=73 Identities=19% Similarity=0.287 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccccccCC
Q 031123 71 TEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKA 150 (165)
Q Consensus 71 ~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~~~ 150 (165)
..+.+.+.+..+|++|++ ++|++|+++|+||+++++.+.++.. . +.+ .+.+|+|.+|++++.++|+|++++.
T Consensus 125 ~~~~~~~~l~~le~~L~~--~~~l~G~~~s~ADi~l~~~~~~~~~-~----~~~-~~~~p~l~~w~~~~~~~p~~k~~~~ 196 (201)
T PRK10542 125 VRAQLEKKFQYVDEALAD--EQWICGQRFTIADAYLFTVLRWAYA-V----KLN-LEGLEHIAAYMQRVAERPAVAAALK 196 (201)
T ss_pred HHHHHHHHHHHHHHHhcC--CCeeeCCCCcHHhHHHHHHHHHhhc-c----CCC-cccchHHHHHHHHHHcCHHHHHHHH
Confidence 356688899999999963 6899999999999999998887642 1 233 3689999999999999999998865
Q ss_pred c
Q 031123 151 E 151 (165)
Q Consensus 151 ~ 151 (165)
+
T Consensus 197 ~ 197 (201)
T PRK10542 197 A 197 (201)
T ss_pred H
Confidence 4
No 11
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.77 E-value=3.8e-18 Score=125.37 Aligned_cols=75 Identities=25% Similarity=0.438 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccccccCCc
Q 031123 72 EQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKAE 151 (165)
Q Consensus 72 ~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~~~~ 151 (165)
.+.+.+.|+.+|++|++++++|++|+++|+||+++++.+.++.. . +.+ .++||+|.+|+++|.++|+++++..+
T Consensus 131 ~~~~~~~l~~le~~L~~~~~~~l~G~~~T~ADi~~~~~l~~~~~-~----~~~-~~~~p~l~~~~~~~~~rp~~~~~~~~ 204 (210)
T TIGR01262 131 QHWISKGFAALEALLQPHAGAFCVGDTPTLADLCLVPQVYNAER-F----GVD-LTPYPTLRRIAAALAALPAFQRAHPE 204 (210)
T ss_pred HHHHHHHHHHHHHHHhcCCCCEeeCCCCCHHHHHHHHHHHHHHH-c----CCC-cccchHHHHHHHHHhcCHHHHHhCcc
Confidence 45688899999999975445799999999999999999887642 1 223 37899999999999999999999875
Q ss_pred h
Q 031123 152 K 152 (165)
Q Consensus 152 ~ 152 (165)
.
T Consensus 205 ~ 205 (210)
T TIGR01262 205 N 205 (210)
T ss_pred c
Confidence 4
No 12
>PLN02395 glutathione S-transferase
Probab=99.77 E-value=3.4e-18 Score=126.11 Aligned_cols=76 Identities=18% Similarity=0.239 Sum_probs=59.9
Q ss_pred hHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccccccC
Q 031123 70 GTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTK 149 (165)
Q Consensus 70 ~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~~ 149 (165)
...+.+.+.++.||+.|++ ++|++|+++|+||+++++++.++.. ........+.+|+|.+|++++.++|++++++
T Consensus 134 ~~~~~~~~~l~~le~~L~~--~~~l~G~~~s~ADi~l~~~~~~~~~---~~~~~~~~~~~p~L~~w~~~~~~rp~~k~~~ 208 (215)
T PLN02395 134 ESEEKLAKVLDVYEARLSK--SKYLAGDFVSLADLAHLPFTEYLVG---PIGKAYLIKDRKHVSAWWDDISSRPAWKEVL 208 (215)
T ss_pred HHHHHHHHHHHHHHHHhcC--CccccCCCcCHHHHHHHHHHHHHhc---ccchhhhhccCchHHHHHHHHHcChHHHHHH
Confidence 3456678899999999963 6899999999999999998877631 1111122477899999999999999999876
Q ss_pred C
Q 031123 150 A 150 (165)
Q Consensus 150 ~ 150 (165)
.
T Consensus 209 ~ 209 (215)
T PLN02395 209 A 209 (215)
T ss_pred H
Confidence 4
No 13
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.75 E-value=3.8e-18 Score=119.29 Aligned_cols=133 Identities=23% Similarity=0.400 Sum_probs=100.8
Q ss_pred CCCCCCCcHHHHHHHHHHhCCCCceEEeecCCCCCC--------------------------------------------
Q 031123 14 PDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQ-------------------------------------------- 49 (165)
Q Consensus 14 ~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~kp~-------------------------------------------- 49 (165)
.||++-|.=++|||++|.+|||+||++.||+-+..+
T Consensus 8 LYSYWrSSCswRVRiALaLK~iDYey~PvnLlk~~~q~~~ef~~iNPm~kVP~L~i~g~tl~eS~AII~YLeEt~P~ppL 87 (217)
T KOG0868|consen 8 LYSYWRSSCSWRVRIALALKGIDYEYKPVNLLKEEDQSDSEFKEINPMEKVPTLVIDGLTLTESLAIIEYLEETYPDPPL 87 (217)
T ss_pred hhhhhcccchHHHHHHHHHcCCCcceeehhhhcchhhhhhHHhhcCchhhCCeEEECCEEeehHHHHHHHHHhcCCCCCC
Confidence 578888888999999999999999999999976422
Q ss_pred -----------------CCCCccH----HHHhhhhCCCCc---hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHH
Q 031123 50 -----------------CGSKIFP----SFVNFLKSKDPN---DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLS 105 (165)
Q Consensus 50 -----------------~~~~~~~----~~~~~~~~~~~~---~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~ 105 (165)
+.+.+-| .+..++..+... .-....+.++|..||+.|+...|+|.+||++|+||++
T Consensus 88 LP~d~~KRA~~r~i~~~i~sgIQPlQNl~vl~~l~ek~~~~~~~W~q~~ItkGF~ALEklL~~~aGkycvGDevtiADl~ 167 (217)
T KOG0868|consen 88 LPKDPHKRAKARAISLLIASGIQPLQNLSVLKMLNEKEPGYGDQWAQHFITKGFTALEKLLKSHAGKYCVGDEVTIADLC 167 (217)
T ss_pred CCcCHHHHHHHHHHHHHHHhCCCcchhhHHHHHhcccccchhhHHHHHHHHHhHHHHHHHHHHccCCcccCceeehhhhc
Confidence 1111111 111222222221 2344567899999999998878999999999999999
Q ss_pred HHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccccccCCch
Q 031123 106 LAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKAEK 152 (165)
Q Consensus 106 l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~~~~~ 152 (165)
+.|.+...+. + ..++ .-||.|.+-.+.+.+.|+|+.+-++.
T Consensus 168 L~pqv~nA~r-f----~vdl-~PYPti~ri~e~l~elpaFq~ahP~n 208 (217)
T KOG0868|consen 168 LPPQVYNANR-F----HVDL-TPYPTITRINEELAELPAFQAAHPDN 208 (217)
T ss_pred cchhhhhhhh-c----cccC-CcCchHHHHHHHHHhCHHHHhcCCCC
Confidence 9999988752 1 2353 78999999999999999999987764
No 14
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.75 E-value=1.9e-17 Score=121.04 Aligned_cols=76 Identities=20% Similarity=0.225 Sum_probs=60.9
Q ss_pred hHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccccccC
Q 031123 70 GTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTK 149 (165)
Q Consensus 70 ~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~~ 149 (165)
...+.+.+.|+.||++|.+ ++ ++|+++|+||+++++.+.++.. . .. +..+..++|+|.+|++++.++|+|+++.
T Consensus 125 ~~~~~l~~~l~~le~~L~~--~~-l~Gd~~t~ADi~l~~~l~~~~~-~-~~-~~~~~~~~p~l~~~~~~i~~rp~~~~~~ 198 (202)
T PRK10357 125 RQREKINRSLDALEGYLVD--GT-LKTDTVNLATIAIACAVGYLNF-R-RV-APGWCVDRPHLVKLVENLFQRESFARTE 198 (202)
T ss_pred HHHHHHHHHHHHHHHhhcc--Cc-ccCCCcCHHHHHHHHHHHHHHh-c-cc-CcchhhcChHHHHHHHHHhcChhhhhcC
Confidence 3456788899999999964 56 9999999999999999988753 1 11 1122367999999999999999999998
Q ss_pred Cc
Q 031123 150 AE 151 (165)
Q Consensus 150 ~~ 151 (165)
+.
T Consensus 199 ~~ 200 (202)
T PRK10357 199 PP 200 (202)
T ss_pred CC
Confidence 75
No 15
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.73 E-value=2.2e-17 Score=121.96 Aligned_cols=74 Identities=11% Similarity=0.178 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccccccCC
Q 031123 71 TEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKA 150 (165)
Q Consensus 71 ~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~~~ 150 (165)
..+.+.+.+..||++|++ ++|++|+++|+||+++++.+..... . +.+ .+.||+|.+|+++|.++|+|+++..
T Consensus 133 ~~~~~~~~l~~le~~L~~--~~~l~Gd~~t~ADi~l~~~~~~~~~-~----~~~-~~~~P~l~~w~~r~~~rp~~~~~~~ 204 (215)
T PRK13972 133 YQVETQRLYHVLNKRLEN--SPWLGGENYSIADIACWPWVNAWTR-Q----RID-LAMYPAVKNWHERIRSRPATGQALL 204 (215)
T ss_pred HHHHHHHHHHHHHHHhcc--CccccCCCCCHHHHHHHHHHHHHhh-c----CCc-chhCHHHHHHHHHHHhCHHHHHHHH
Confidence 345677889999999963 6899999999999999887754321 1 233 3789999999999999999988765
Q ss_pred ch
Q 031123 151 EK 152 (165)
Q Consensus 151 ~~ 152 (165)
..
T Consensus 205 ~~ 206 (215)
T PRK13972 205 KA 206 (215)
T ss_pred Hh
Confidence 43
No 16
>PRK15113 glutathione S-transferase; Provisional
Probab=99.72 E-value=1e-16 Score=118.38 Aligned_cols=135 Identities=20% Similarity=0.252 Sum_probs=95.4
Q ss_pred ceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecCCCCC----C----------------------------
Q 031123 2 AVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKP----Q---------------------------- 49 (165)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~kp----~---------------------------- 49 (165)
|++||+.+. +.||||+||+++|.++||+||.+.+|+.+++ +
T Consensus 5 ~~~Ly~~~~-------~~s~~~~rv~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~g~VP~L~~~~~~l~ES~aI~~ 77 (214)
T PRK15113 5 AITLYSDAH-------FFSPYVMSAFVALQEKGLPFELKTVDLDAGEHLQPTYQGYSLTRRVPTLQHDDFELSESSAIAE 77 (214)
T ss_pred eEEEEeCCC-------CCCchHHHHHHHHHHcCCCCeEEEeCCCCccccCHHHHhcCCCCCCCEEEECCEEEecHHHHHH
Confidence 467886543 2378899999999999999999999986532 1
Q ss_pred -----CC-CC---ccHH----------HHhh----h------------h-C-CCCc--hhHHHHHHHHHHHHHHHHhhCC
Q 031123 50 -----CG-SK---IFPS----------FVNF----L------------K-S-KDPN--DGTEQALLEELKALDEHLKTHG 90 (165)
Q Consensus 50 -----~~-~~---~~~~----------~~~~----~------------~-~-~~~~--~~~~~~~~~~l~~le~~L~~~~ 90 (165)
.. .. ++|. +..+ + . . ..+. +...+.+.+.++.+|++|+++
T Consensus 78 YL~~~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~- 156 (214)
T PRK15113 78 YLEERFAPPAWERIYPADLQARARARQIQAWLRSDLMPLREERPTDVVFAGAKKAPLSEAGKAAAEKLFAVAERLLAPG- 156 (214)
T ss_pred HHHHHcCCCCccccCCCCHHHHHHHHHHHHHHHhhhHHHhccCccchhccCCCCCcccHHHHHHHHHHHHHHHHHHhcC-
Confidence 21 11 4331 0000 0 0 0 1111 456777889999999999642
Q ss_pred CCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccccccCCchH
Q 031123 91 GPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKAEKQ 153 (165)
Q Consensus 91 ~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~~~~~~ 153 (165)
++|++|+ +|+||+++++.+.++.. . +.++ .|+|.+|++|+.++|+|+++..+.+
T Consensus 157 ~~~l~G~-~TlADi~l~~~l~~~~~-~----~~~~---~p~l~~~~~r~~~rp~~~~~~~~~~ 210 (214)
T PRK15113 157 QPNLFGE-WCIADTDLALMLNRLVL-H----GDEV---PERLADYATFQWQRASVQRWLALSA 210 (214)
T ss_pred CCEeeCC-ccHHHHHHHHHHHHHHH-c----CCCC---CHHHHHHHHHHhcCHHHHHHHHHhh
Confidence 5799996 99999999999887652 1 2232 2999999999999999999876554
No 17
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.71 E-value=2e-17 Score=121.53 Aligned_cols=77 Identities=10% Similarity=0.160 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccccccCCc
Q 031123 72 EQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKAE 151 (165)
Q Consensus 72 ~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~~~~ 151 (165)
.+.+.+.++.+|+.|++++++|++|+++|+||+++++.+.++.... +.+ .+.||+|.+|++|+.++|++++.+.+
T Consensus 125 ~~~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~~~----~~~-l~~~P~l~~~~~r~~~~P~~k~y~~~ 199 (205)
T PTZ00057 125 NEELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDDIETKY----PNS-LKNFPLLKAHNEFISNLPNIKNYISN 199 (205)
T ss_pred HHHHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHHhC----hhh-hccChhHHHHHHHHHhChHHHHHHHh
Confidence 4567788999999997544589999999999999999888765211 223 37899999999999999999998765
Q ss_pred hH
Q 031123 152 KQ 153 (165)
Q Consensus 152 ~~ 153 (165)
+.
T Consensus 200 ~~ 201 (205)
T PTZ00057 200 RK 201 (205)
T ss_pred CC
Confidence 43
No 18
>PRK10387 glutaredoxin 2; Provisional
Probab=99.68 E-value=2.1e-16 Score=116.07 Aligned_cols=66 Identities=21% Similarity=0.279 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCcccc
Q 031123 71 TEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQ 146 (165)
Q Consensus 71 ~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~ 146 (165)
..+.+.+.|+.+|++|+ ++|++|+++|+||+++++.+.++.. . .+. +.+|+|.+|++||.++|.+.
T Consensus 143 ~~~~~~~~l~~le~~L~---~~~l~G~~~s~ADi~l~~~l~~~~~-~---~~~---~~~p~l~~w~~r~~~r~~~~ 208 (210)
T PRK10387 143 LIKEINADLRALDPLIV---KPNAVNGELSTDDIHLFPILRNLTL-V---KGI---EWPPRVADYRDNMSKKTQVP 208 (210)
T ss_pred HHHHHHHHHHHHHHHhc---CccccCCCCCHHHHHHHHHHhccee-e---cCC---CCCHHHHHHHHHHHHHhCCC
Confidence 35577889999999985 3899999999999999999988753 1 122 34699999999999999864
No 19
>PRK11752 putative S-transferase; Provisional
Probab=99.67 E-value=7.1e-16 Score=117.43 Aligned_cols=78 Identities=19% Similarity=0.305 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhcc--C-CCCCccchHHHHHHHHhhcCccccc
Q 031123 71 TEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFK--Q-WTVPESLAHVHGYTKKLFALESFQK 147 (165)
Q Consensus 71 ~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~--~-~~~~~~~p~l~~w~~ri~~~p~~~~ 147 (165)
..+++.+.|..+|++|++ ++|++|+++|+|||++++.+.++.. ...+. . .+ .+.||+|.+|+++|.++|+|++
T Consensus 179 ~~~~~~~~L~~le~~L~~--~~fl~Gd~~TlADi~l~~~l~~l~~-~~~~~~~~~~~-~~~~P~L~~w~~rv~~rPs~k~ 254 (264)
T PRK11752 179 FTMEAKRQLDVLDKQLAE--HEYIAGDEYTIADIAIWPWYGNLVL-GNLYDAAEFLD-VGSYKHVQRWAKEIAERPAVKR 254 (264)
T ss_pred HHHHHHHHHHHHHHHhcc--CCCCCCCccCHHHHHHHHHHHHHhh-ccccccccccC-cccCHHHHHHHHHHHhCHHHHH
Confidence 345677889999999964 6899999999999999998877642 10010 1 12 3789999999999999999999
Q ss_pred cCCch
Q 031123 148 TKAEK 152 (165)
Q Consensus 148 ~~~~~ 152 (165)
+...+
T Consensus 255 ~~~~~ 259 (264)
T PRK11752 255 GRIVN 259 (264)
T ss_pred HHhcc
Confidence 87544
No 20
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.66 E-value=1.2e-15 Score=103.47 Aligned_cols=108 Identities=17% Similarity=0.246 Sum_probs=83.5
Q ss_pred CccHHHHhhhhCCCCchhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccC-CCCCccchH
Q 031123 53 KIFPSFVNFLKSKDPNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQ-WTVPESLAH 131 (165)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~-~~~~~~~p~ 131 (165)
.+++.++..+..++..++..+.+.+.++.+|+.|++.+++|++|+++|+||++++|.+.++.. .....+ ....+.+|+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~-~~~~~~~~~~~~~~p~ 93 (124)
T cd03184 15 KVVSAFYKLLGAPSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLEA-LKLLLGYEFPLDRFPK 93 (124)
T ss_pred hhhHHHHHHHhccccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHH-HHhhccccCCcccChH
Confidence 344555555554222267888999999999999975347999999999999999999988764 221111 112478999
Q ss_pred HHHHHHHhhcCccccccCCchHHHHHHhcc
Q 031123 132 VHGYTKKLFALESFQKTKAEKQYVIAGWVP 161 (165)
Q Consensus 132 l~~w~~ri~~~p~~~~~~~~~~~~~~~~~~ 161 (165)
|.+|+++|.++|+++.+.++.+.+++.++.
T Consensus 94 l~~w~~r~~~~p~v~~~~~~~~~~~~~~~~ 123 (124)
T cd03184 94 LKKWMDAMKEDPAVQAFYTDTEIHAEFLKS 123 (124)
T ss_pred HHHHHHHhccChHHHHHhCCHHHHHHHHhc
Confidence 999999999999999999999999998875
No 21
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.63 E-value=4.1e-15 Score=109.51 Aligned_cols=70 Identities=24% Similarity=0.517 Sum_probs=57.8
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCcccc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQ 146 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~ 146 (165)
+...+.+...++.+|+.|.. ++|++|+++|+||+++++.+.++.. . +.++ +.+|++.+|++|+.++|+++
T Consensus 130 ~~~~~~~~~~l~~le~~L~~--~~~l~G~~~tiAD~~~~~~~~~~~~-~----~~~~-~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 130 EAARAEIRALLALLEALLAD--GPYLAGDRFTIADIALAPLLWRLAL-L----GEEL-ADYPALKAWYERVLARPAFR 199 (211)
T ss_pred HHHHHHHHHHHHHHHHHhcc--CCcccCCCCCHHHHHHHHHHHHhhh-c----Cccc-ccChHHHHHHHHHHcCCchh
Confidence 34566778899999999974 7999999999999999999988652 1 2232 78999999999999999965
No 22
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.59 E-value=9.1e-15 Score=98.72 Aligned_cols=87 Identities=18% Similarity=0.383 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHhh-CCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccccccCCc
Q 031123 73 QALLEELKALDEHLKT-HGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKAE 151 (165)
Q Consensus 73 ~~~~~~l~~le~~L~~-~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~~~~ 151 (165)
+.+.+.++.||+.|++ ++++|++| ++|+||++++|.+.++........++++.+++|+|.+|+++|.++|+++++.++
T Consensus 33 ~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~~~~~~~~~~~~~~~~~~P~l~~W~~~~~~rp~~~~~~~~ 111 (120)
T cd03203 33 AEAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIERFQIFLSELFNYDITEGRPNLAAWIEEMNKIEAYTQTKQD 111 (120)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHHHHHHHHHhcCccccccCcHHHHHHHHHhcchHHHhHcCC
Confidence 3557788889998863 13789999 999999999999987753222223455557899999999999999999999999
Q ss_pred hHHHHHHhc
Q 031123 152 KQYVIAGWV 160 (165)
Q Consensus 152 ~~~~~~~~~ 160 (165)
.+.+++.++
T Consensus 112 ~~~~~~~~~ 120 (120)
T cd03203 112 PQELLDLAK 120 (120)
T ss_pred HHHHHhhhC
Confidence 999988653
No 23
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.57 E-value=1e-14 Score=107.41 Aligned_cols=66 Identities=15% Similarity=0.246 Sum_probs=51.1
Q ss_pred hHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccch-HHHHHHHHhhcCcccc
Q 031123 70 GTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLA-HVHGYTKKLFALESFQ 146 (165)
Q Consensus 70 ~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p-~l~~w~~ri~~~p~~~ 146 (165)
+..+.+.+.|+.+|++|++ ++|++ +++|+||+++++.+.++.. . .+. .+| +|.+|++||++++++.
T Consensus 141 ~~~~~~~~~l~~le~~L~~--~~~l~-g~~TiADi~l~~~l~~~~~-~---~~~----~~p~~l~~w~~Ri~ar~~~~ 207 (209)
T TIGR02182 141 GLLEEINADLEELDKLIDG--PNAVN-GELSEDDILVFPLLRNLTL-V---AGI----NWPSRVADYLDNMSKKSKVP 207 (209)
T ss_pred HHHHHHHHHHHHHHHHHhC--ccccC-CCCCHHHHHHHHHhcCeee-e---cCC----CCChHHHHHHHHHHHHhCCC
Confidence 3456678899999999964 78985 5699999999999887652 1 111 245 9999999999988763
No 24
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.56 E-value=2.2e-14 Score=99.66 Aligned_cols=92 Identities=18% Similarity=0.318 Sum_probs=73.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhh-cc-CCCCCccchHHHHHHHHhhcCcccc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEH-FK-QWTVPESLAHVHGYTKKLFALESFQ 146 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~-~~-~~~~~~~~p~l~~w~~ri~~~p~~~ 146 (165)
+...+.+.+.|+.||+.|++ ++|++|+++|+||+++++.+.++...... .. +....++||+|.+|+++|.++|+++
T Consensus 36 ~~~~~~l~~~l~~LE~~L~~--~~yl~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~P~~k 113 (142)
T cd03190 36 DEAVDELFEALDRLEELLSD--RRYLLGDRLTEADIRLFTTLIRFDAVYVQHFKCNLKRIRDYPNLWNYLRRLYQNPGVA 113 (142)
T ss_pred HHHHHHHHHHHHHHHHHHcc--CCeeeCCCccHHHHHHHHHHHHHHHHhhhhcccccchhhhCchHHHHHHHHhcCchHh
Confidence 56678899999999999963 69999999999999999998876431111 10 1122368999999999999999999
Q ss_pred ccCCchHHHHHHhccc
Q 031123 147 KTKAEKQYVIAGWVPK 162 (165)
Q Consensus 147 ~~~~~~~~~~~~~~~~ 162 (165)
++....+.+...++..
T Consensus 114 ~~~~~~~~~~~~~~~~ 129 (142)
T cd03190 114 ETTNFDHIKQHYYGSH 129 (142)
T ss_pred hhcCHHHHHHHHHhhc
Confidence 9999888888877654
No 25
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.55 E-value=8.5e-15 Score=108.10 Aligned_cols=87 Identities=20% Similarity=0.261 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHHhhC--CCCcccCCCCChhhHHHHhHHHHHHHHhhhccC-CCCCccchHHHHHHHHhhcCccccc
Q 031123 71 TEQALLEELKALDEHLKTH--GGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQ-WTVPESLAHVHGYTKKLFALESFQK 147 (165)
Q Consensus 71 ~~~~~~~~l~~le~~L~~~--~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~-~~~~~~~p~l~~w~~ri~~~p~~~~ 147 (165)
....+...|..+|+.|.++ ...|++|+.+|+||+.+.++++++.. ++--.. |. ..+.|+|.+|++|+..|++|++
T Consensus 206 ild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~-Lg~e~~yw~-~gsrpnle~Yf~rvrrR~sf~k 283 (325)
T KOG4420|consen 206 ILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKF-LGLEKKYWE-DGSRPNLESYFERVRRRFSFRK 283 (325)
T ss_pred HHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHH-cccHHHhcc-cCCCccHHHHHHHHHhhhHHHH
Confidence 3456667788888888753 35999999999999999999999975 432111 22 3688999999999999999999
Q ss_pred cCCchHHHHHHh
Q 031123 148 TKAEKQYVIAGW 159 (165)
Q Consensus 148 ~~~~~~~~~~~~ 159 (165)
++++...++-++
T Consensus 284 vlg~~fnilr~~ 295 (325)
T KOG4420|consen 284 VLGDIFNILRFR 295 (325)
T ss_pred hhhhHHHHHHHH
Confidence 999998886643
No 26
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.55 E-value=3.9e-14 Score=95.95 Aligned_cols=89 Identities=20% Similarity=0.361 Sum_probs=73.5
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCC--CccchHHHHHHHHhhcCcccc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTV--PESLAHVHGYTKKLFALESFQ 146 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~--~~~~p~l~~w~~ri~~~p~~~ 146 (165)
+...+.+.+.++.||+.|++ ++|++|+++|+||+++++.+.++.. .....+.++ .+.+|++.+|++++.++|+++
T Consensus 34 ~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~ADi~l~~~~~~~~~-~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~ 110 (126)
T cd03185 34 EKAKEEALEALKVLEEELGG--KPFFGGDTIGYVDIALGSFLGWFRA-YEEVGGVKLLDEEKTPLLAAWAERFLELEAVK 110 (126)
T ss_pred HHHHHHHHHHHHHHHHHhcC--CCCCCCCCcchHHHHHHHHHHHHHH-HHHHcCccccCcccCchHHHHHHHHHhccHHH
Confidence 55778899999999999964 6899999999999999999988763 222222231 367999999999999999999
Q ss_pred ccCCchHHHHHHhc
Q 031123 147 KTKAEKQYVIAGWV 160 (165)
Q Consensus 147 ~~~~~~~~~~~~~~ 160 (165)
++.+..+..++.++
T Consensus 111 ~~~~~~~~~~~~~~ 124 (126)
T cd03185 111 EVLPDRDKLVEFAK 124 (126)
T ss_pred HhCCCHHHHHHHHH
Confidence 99999988887664
No 27
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.54 E-value=8.9e-14 Score=103.64 Aligned_cols=139 Identities=19% Similarity=0.307 Sum_probs=101.4
Q ss_pred CceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecCCCCCC-------------------------------
Q 031123 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQ------------------------------- 49 (165)
Q Consensus 1 ~~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~kp~------------------------------- 49 (165)
|.++||+.+++.+ |++|.+++.++|++||.+.+|+....+
T Consensus 1 ~~~~ly~~~~s~~---------~r~vl~~~~~~~l~~e~~~v~~~~ge~~~pefl~~nP~~kVP~l~d~~~~l~eS~AI~ 71 (226)
T KOG0867|consen 1 MKLKLYGHLGSPP---------ARAVLIAAKELGLEVELKPVDLVKGEQKSPEFLKLNPLGKVPALEDGGLTLWESHAIL 71 (226)
T ss_pred CCceEeecCCCcc---------hHHHHHHHHHcCCceeEEEeeccccccCCHHHHhcCcCCCCCeEecCCeEEeeHHHHH
Confidence 6788999998888 999999999999999999998875322
Q ss_pred ------CC--CC-ccH----------------------H------HHhhhhCC--CCc--hhHHHHHHHHHHHHHHHHhh
Q 031123 50 ------CG--SK-IFP----------------------S------FVNFLKSK--DPN--DGTEQALLEELKALDEHLKT 88 (165)
Q Consensus 50 ------~~--~~-~~~----------------------~------~~~~~~~~--~~~--~~~~~~~~~~l~~le~~L~~ 88 (165)
.. .. ++| . +...+... +.. ++....+...+..+|++|.+
T Consensus 72 ~Yl~~ky~~~~~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~ 151 (226)
T KOG0867|consen 72 RYLAEKYGPLGGILLPKDLKERAIVDQWLEFENGVLDPVTFERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKT 151 (226)
T ss_pred HHHHHHcCCCCcccCCcCHHHHHHHHHHHHhhhcccccccccceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHcc
Confidence 11 00 111 0 00001111 111 56778899999999999974
Q ss_pred CCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccccccCCchH
Q 031123 89 HGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKAEKQ 153 (165)
Q Consensus 89 ~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~~~~~~ 153 (165)
+.|++|+++|+||+.+++.+..+.. ... ......++|++.+|++++.++|+++++.....
T Consensus 152 --~~yl~g~~~tlADl~~~~~~~~~~~--~~~-~~~~~~~~p~v~~W~~~~~~~P~~~e~~~~~~ 211 (226)
T KOG0867|consen 152 --QVYLAGDQLTLADLSLASTLSQFQG--KFA-TEKDFEKYPKVARWYERIQKRPAYEEANEKGA 211 (226)
T ss_pred --CCcccCCcccHHHHHHhhHHHHHhH--hhh-hhhhhhhChHHHHHHHHHHhCccHHHHHHHHH
Confidence 6999999999999999999988731 111 11224899999999999999999888665443
No 28
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=99.49 E-value=8.1e-14 Score=104.06 Aligned_cols=68 Identities=21% Similarity=0.277 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcC
Q 031123 70 GTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFAL 142 (165)
Q Consensus 70 ~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~ 142 (165)
..++.+.+++..+-..|+++ ++|+.|+++++||+.++..+..+.. +..++ ++ -...+|..|+-||+..
T Consensus 288 D~Re~lydA~d~Wvaalgkn-r~flGG~kPnLaDLsvfGvl~sm~g-c~afk--d~-~q~t~I~eW~~rmeal 355 (370)
T KOG3029|consen 288 DEREHLYDAADQWVAALGKN-RPFLGGKKPNLADLSVFGVLRSMEG-CQAFK--DC-LQNTSIGEWYYRMEAL 355 (370)
T ss_pred hHHHHHHHHHHHHHHHhCCC-CCccCCCCCchhhhhhhhhhhHhhh-hhHHH--HH-HhcchHHHHHHHHHHH
Confidence 36778888899888889754 8999999999999999999999884 55444 33 2458999999999863
No 29
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.46 E-value=3.8e-13 Score=98.18 Aligned_cols=138 Identities=17% Similarity=0.228 Sum_probs=97.3
Q ss_pred ceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecCCC-CCC-------------------------------
Q 031123 2 AVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISD-KPQ------------------------------- 49 (165)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~-kp~------------------------------- 49 (165)
..+|+++..-.- ++-+|+++...|++||.+++...+ +++
T Consensus 3 ~ykL~Yf~~RG~---------ae~iR~lf~~a~v~fEd~r~~~~~~w~~~K~~~pfgqlP~l~vDg~~i~QS~AI~RyLA 73 (206)
T KOG1695|consen 3 PYKLTYFNIRGL---------AEPIRLLFAYAGVSFEDKRITMEDAWEELKDKMPFGQLPVLEVDGKKLVQSRAILRYLA 73 (206)
T ss_pred ceEEEecCcchh---------HHHHHHHHHhcCCCcceeeeccccchhhhcccCCCCCCCEEeECCEeeccHHHHHHHHH
Confidence 457888877776 899999999999999999998877 433
Q ss_pred -----CCC----------------CccHH-HHhhhhC---CCCc---h-hHHHHHHHHHHHHHHHHhhCCCCcccCCCCC
Q 031123 50 -----CGS----------------KIFPS-FVNFLKS---KDPN---D-GTEQALLEELKALDEHLKTHGGPFIAGEKVT 100 (165)
Q Consensus 50 -----~~~----------------~~~~~-~~~~~~~---~~~~---~-~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T 100 (165)
.+. ++... +...+.. +..+ + .........+..+++.|.+++++|++|+++|
T Consensus 74 rk~gl~Gkt~~E~a~vD~i~d~~~D~~~~~~~~~~~~~~~g~~~~~~~~~~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT 153 (206)
T KOG1695|consen 74 RKFGLAGKTEEEEAWVDMIVDQFKDFRWEIFRQPYTAPEAGKSEEELDKLYLPAKPKYFKILEKILKKNKSGFLVGDKLT 153 (206)
T ss_pred HHhCcCCCCHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhccchhhhhhhhccchHHHHHHHHHHHHhCCCCeeecCccc
Confidence 000 11111 0000010 1111 1 2233456678899999987667899999999
Q ss_pred hhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccccccCCch
Q 031123 101 AVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKAEK 152 (165)
Q Consensus 101 ~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~~~~~ 152 (165)
+||+.++.++..+.. . ...+..+.+|+|.++.+|+.++|.+++.+.++
T Consensus 154 ~aDl~i~e~l~~l~~-~---~~~~~~~~~P~L~a~~~kv~~~p~ik~~i~~r 201 (206)
T KOG1695|consen 154 WADLVIAEHLDTLEE-L---LDPSALDHFPKLKAFKERVSSIPNIKKYLESR 201 (206)
T ss_pred HHHHHHHHHHHHHHH-h---cCchhhccChHHHHHHHHHhcCchHHHHHhcC
Confidence 999999999988864 1 12234578899999999999999999876554
No 30
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.45 E-value=4.6e-13 Score=87.68 Aligned_cols=73 Identities=22% Similarity=0.301 Sum_probs=62.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCcccccc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT 148 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~ 148 (165)
+...+++.+.++.+|++|++ ++|++|+++|+||+++++.+.++.. . + ..+.+|+|.+|++++.++|+++.+
T Consensus 29 ~~~~~~~~~~l~~le~~l~~--~~~l~g~~~t~aDi~~~~~~~~~~~-~----~--~~~~~p~l~~w~~~~~~~p~~~~~ 99 (103)
T cd03207 29 MAGFGSYDDVLAALEQALAK--GPYLLGERFTAADVLVGSPLGWGLQ-F----G--LLPERPAFDAYIARITDRPAFQRA 99 (103)
T ss_pred hhhhhhHHHHHHHHHHHHcc--CCcccCCccCHHHHHHHHHHHHHHH-c----C--CCCCChHHHHHHHHHHcCHHHHHH
Confidence 55678899999999999974 6899999999999999999988753 1 1 236899999999999999999987
Q ss_pred CC
Q 031123 149 KA 150 (165)
Q Consensus 149 ~~ 150 (165)
..
T Consensus 100 ~~ 101 (103)
T cd03207 100 AA 101 (103)
T ss_pred hc
Confidence 64
No 31
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.44 E-value=4.6e-13 Score=88.27 Aligned_cols=73 Identities=32% Similarity=0.536 Sum_probs=61.2
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCcccccc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT 148 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~ 148 (165)
+...+.+.+.+..||+.|.+ ++|++|+++|+||+++++.+.++.. . +.+++..+|++.+|++++.++|+++++
T Consensus 34 ~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aDi~~~~~~~~~~~-~----~~~~~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 34 EKARKELRESLLALAPVFAH--KPYFMSEEFSLVDCALAPLLWRLPA-L----GIELPKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred HHHHHHHHHHHHHHHHHHcC--CCcccCCCCcHHHHHHHHHHHHHHH-c----CCCCcccchHHHHHHHHHHCCHHHHHh
Confidence 55677899999999999963 7999999999999999998866542 1 334446899999999999999999875
No 32
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.43 E-value=1.1e-12 Score=84.45 Aligned_cols=68 Identities=28% Similarity=0.517 Sum_probs=57.5
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCC-ccchHHHHHHHHhhcCc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVP-ESLAHVHGYTKKLFALE 143 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~-~~~p~l~~w~~ri~~~p 143 (165)
+...+.+.+.|..+|+.|+ +++|++|+++|+||+++++.+.++.. . +.... ++||+|.+|++|+.++|
T Consensus 27 ~~~~~~~~~~l~~le~~l~--~~~~l~G~~~t~ADi~~~~~~~~~~~-~----~~~~~~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 27 EEARAKVPRYLEVLEKRLK--GGPYLVGDKLTIADIALFPMLDWLER-L----GPDFLFEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHH--TSSSSSBSS-CHHHHHHHHHHHHHHH-H----TTTTTHTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHHHHc--CCCeeeccCCchhHHHHHHHHHHHHH-h----CCCcccccCHHHHHHHHHHHcCC
Confidence 5567788899999999997 38999999999999999999999874 2 22333 89999999999999987
No 33
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.42 E-value=3.9e-13 Score=91.42 Aligned_cols=79 Identities=23% Similarity=0.302 Sum_probs=64.2
Q ss_pred hhHHHHHHHHHHHHHHHHhhC-CCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccccc
Q 031123 69 DGTEQALLEELKALDEHLKTH-GGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQK 147 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~-~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~ 147 (165)
+...+.+.+.++.||+.|.++ +++|++|+++|+||+++++.+.++.. .. ....+.+|+|.+|++|+.++|++++
T Consensus 34 ~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~-~~----~~~~~~~P~l~~~~~rv~~~p~v~~ 108 (126)
T cd03210 34 DDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLV-LA----PGCLDAFPLLKAFVERLSARPKLKA 108 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHH-hC----hHhhhcChHHHHHHHHHHhCcHHHH
Confidence 445667889999999999753 36899999999999999999888753 11 1124789999999999999999999
Q ss_pred cCCch
Q 031123 148 TKAEK 152 (165)
Q Consensus 148 ~~~~~ 152 (165)
+...+
T Consensus 109 ~~~~~ 113 (126)
T cd03210 109 YLESD 113 (126)
T ss_pred HHhCc
Confidence 87654
No 34
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.41 E-value=7.6e-13 Score=89.31 Aligned_cols=78 Identities=21% Similarity=0.328 Sum_probs=64.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCcccccc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT 148 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~ 148 (165)
+...+.+.+.++.||++|++ ++|++|+++|+||+++++.+.++.. .. ....+.||+|.+|++|+.++|+++++
T Consensus 34 ~~~~~~~~~~l~~le~~L~~--~~~l~G~~~T~aDi~l~~~~~~~~~-~~----~~~~~~~P~l~~~~~rv~~~p~vk~~ 106 (121)
T cd03209 34 PDYLAKLPDKLKLFSDFLGD--RPWFAGDKITYVDFLLYEALDQHRI-FE----PDCLDAFPNLKDFLERFEALPKISAY 106 (121)
T ss_pred HHHHHHHHHHHHHHHHHhCC--CCCcCCCCccHHHHHHHHHHHHHHH-hC----ccccccChHHHHHHHHHHHCHHHHHH
Confidence 44567788899999999963 6899999999999999999888763 21 12247899999999999999999998
Q ss_pred CCchH
Q 031123 149 KAEKQ 153 (165)
Q Consensus 149 ~~~~~ 153 (165)
..++.
T Consensus 107 ~~~~~ 111 (121)
T cd03209 107 MKSDR 111 (121)
T ss_pred Hhccc
Confidence 87664
No 35
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.41 E-value=1.3e-12 Score=87.51 Aligned_cols=76 Identities=17% Similarity=0.276 Sum_probs=61.7
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCcccccc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT 148 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~ 148 (165)
+...+.+.+.+..||++|++ ++|++|+++|+||+++++.+.++.. .. ....+ .+++|+|.+|++++.++|+|+++
T Consensus 40 ~~~~~~i~~~l~~le~~L~~--~~yl~Gd~~tlADi~l~~~l~~~~~-~~-~~~~~-~~~~P~L~~w~~r~~~rpa~~~~ 114 (115)
T cd03196 40 EEYRQQAEAFLKDLEARLQQ--HSYLLGDKPSLADWAIFPFVRQFAH-VD-PKWFD-QSPYPRLRRWLNGFLASPLFSKI 114 (115)
T ss_pred HHHHHHHHHHHHHHHHHHcc--CCccCCCCccHHHHHHHHHHHHHHH-hh-hcccC-cccCHHHHHHHHHHHcChHHHhh
Confidence 56778899999999999974 6899999999999999998877642 11 11122 37899999999999999999986
Q ss_pred C
Q 031123 149 K 149 (165)
Q Consensus 149 ~ 149 (165)
+
T Consensus 115 ~ 115 (115)
T cd03196 115 M 115 (115)
T ss_pred C
Confidence 3
No 36
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.41 E-value=1.1e-12 Score=88.36 Aligned_cols=75 Identities=19% Similarity=0.366 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccccccCC
Q 031123 71 TEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKA 150 (165)
Q Consensus 71 ~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~~~ 150 (165)
..+.+.+.|..+|+.|++++++|++|+++|+||+++++.+.++.. . ++++ +.+|+|.+|++++.++|+|+++.+
T Consensus 45 ~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~~~~~~~-~----~~~~-~~~p~l~~w~~~~~~~p~~~~~~~ 118 (121)
T cd03191 45 YRHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLVPQVYNARR-F----GVDL-SPYPTIARINEACLELPAFQAAHP 118 (121)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHHHHHHHHHH-h----CCCc-ccCcHHHHHHHHHHhChhHHHhCc
Confidence 445688999999999974225799999999999999999887642 1 2333 789999999999999999999876
Q ss_pred c
Q 031123 151 E 151 (165)
Q Consensus 151 ~ 151 (165)
.
T Consensus 119 ~ 119 (121)
T cd03191 119 D 119 (121)
T ss_pred C
Confidence 4
No 37
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.40 E-value=3.2e-13 Score=100.65 Aligned_cols=91 Identities=21% Similarity=0.400 Sum_probs=72.3
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHh-hhcc-CCCCCccchHHHHHHHHhhcCcccc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVAL-EHFK-QWTVPESLAHVHGYTKKLFALESFQ 146 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~-~~~~-~~~~~~~~p~l~~w~~ri~~~p~~~ 146 (165)
+++.+.+-+.|..||+.|++ +.|++|+++|-||+-++++|-+++.+. .+|+ +..-..+||+|..|+..+.+.|.|.
T Consensus 204 eea~~~lF~~Ld~lE~~L~~--~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq~pg~~ 281 (324)
T COG0435 204 EEAVKKLFEALDKLEQILSE--RRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQLPGFA 281 (324)
T ss_pred HHHHHHHHHHHHHHHHHhhc--CeeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHHhcCcccc
Confidence 56777888999999999985 699999999999999999999887532 3333 2211367999999999999999999
Q ss_pred ccCCchHHHHHHhcc
Q 031123 147 KTKAEKQYVIAGWVP 161 (165)
Q Consensus 147 ~~~~~~~~~~~~~~~ 161 (165)
++..-.+.-.+.|..
T Consensus 282 ~T~df~hIK~hYyrS 296 (324)
T COG0435 282 ETVDFDHIKLHYYRS 296 (324)
T ss_pred cccchhHhhhhheec
Confidence 998655555665543
No 38
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.39 E-value=1.4e-12 Score=86.65 Aligned_cols=72 Identities=19% Similarity=0.295 Sum_probs=60.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCcccccc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT 148 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~ 148 (165)
+...+.+.+.+..+|+.|++ ++|++|+++|+|||++++.+.++.. . +.+ .+++|+|.+|++++.++|+++++
T Consensus 42 ~~~~~~~~~~l~~le~~l~~--~~~l~G~~~t~aDi~~~~~~~~~~~-~----~~~-~~~~p~l~~w~~~~~~~p~~k~~ 113 (114)
T cd03188 42 AAARERLAARLAYLDAQLAG--GPYLLGDRFSVADAYLFVVLRWAPG-V----GLD-LSDWPNLAAYLARVAARPAVQAA 113 (114)
T ss_pred HHHHHHHHHHHHHHHHHhcC--CCeeeCCCcchHHHHHHHHHHHHhh-c----CCC-hhhChHHHHHHHHHHhCHHhHhh
Confidence 44567889999999999963 7899999999999999999887652 1 223 26899999999999999999875
No 39
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.37 E-value=3.3e-12 Score=84.84 Aligned_cols=72 Identities=21% Similarity=0.329 Sum_probs=59.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhCC--------CCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCC----CccchHHHHHH
Q 031123 69 DGTEQALLEELKALDEHLKTHG--------GPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTV----PESLAHVHGYT 136 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~--------~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~----~~~~p~l~~w~ 136 (165)
++..+.+...++.||++|.++. ++|++|+++|+||+++++.+.++.. . +++. ...||+|.+|+
T Consensus 28 ~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~-~----~~~~~~~~~~~~P~l~~w~ 102 (111)
T cd03204 28 KKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKF-L----GLSRRYWGNGKRPNLEAYF 102 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHH-c----CccccccccccChHHHHHH
Confidence 5678889999999999997421 1599999999999999999998763 2 2222 25799999999
Q ss_pred HHhhcCccc
Q 031123 137 KKLFALESF 145 (165)
Q Consensus 137 ~ri~~~p~~ 145 (165)
+||.++|+|
T Consensus 103 ~rv~aRpsf 111 (111)
T cd03204 103 ERVLQRESF 111 (111)
T ss_pred HHHHcCCCC
Confidence 999999986
No 40
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.35 E-value=2.2e-12 Score=89.06 Aligned_cols=74 Identities=18% Similarity=0.332 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccccccCCch
Q 031123 74 ALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKAEK 152 (165)
Q Consensus 74 ~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~~~~~ 152 (165)
.+.+.|+.||+.|.+++++|++|+++|+||+++++.+.++.. . .....+.||+|.+|++|+.++|++++++...
T Consensus 43 ~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~-~----~~~~l~~~P~l~~~~~rv~~~P~vk~~~~~~ 116 (137)
T cd03208 43 AKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEE-L----DPSLLSDFPLLQAFKTRISNLPTIKKFLQPG 116 (137)
T ss_pred HHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHH-h----chhhhccChHHHHHHHHHHcCHHHHHHHhcC
Confidence 457899999999974346899999999999999999988753 1 1122478999999999999999999887644
No 41
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.35 E-value=9.8e-13 Score=97.30 Aligned_cols=93 Identities=17% Similarity=0.344 Sum_probs=72.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhh-cc-CC-CCCccchHHHHHHHHhhc-Ccc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEH-FK-QW-TVPESLAHVHGYTKKLFA-LES 144 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~-~~-~~-~~~~~~p~l~~w~~ri~~-~p~ 144 (165)
+...+++.+.|+.+|+.|+++.+.|++|+++|.||+.|++++-+++.+... |+ +. .+.++||+|..|..++-. .|+
T Consensus 202 e~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l~~~lk~iY~~~~~ 281 (319)
T KOG2903|consen 202 EEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNLHNWLKNIYWNIPG 281 (319)
T ss_pred HHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccCcHHHHHHHHHHhhccc
Confidence 667888999999999999875445999999999999999988887653322 22 11 244799999999999998 999
Q ss_pred ccccCCchHHHHHHhcc
Q 031123 145 FQKTKAEKQYVIAGWVP 161 (165)
Q Consensus 145 ~~~~~~~~~~~~~~~~~ 161 (165)
|+.+..-.+.-...|+.
T Consensus 282 ~~~Ttd~~hIk~~Y~~S 298 (319)
T KOG2903|consen 282 FSSTTDFNHIKLHYYRS 298 (319)
T ss_pred hhhccchhHHhhhhccc
Confidence 99998666665655543
No 42
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.35 E-value=2.1e-12 Score=86.30 Aligned_cols=74 Identities=24% Similarity=0.331 Sum_probs=60.5
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCcccccc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT 148 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~ 148 (165)
+...+.+.+.++.||++|++ ++|++|+++|+||+++++.+.++.. .. .....+.+|+|.+|++++.++|+++++
T Consensus 44 ~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aDi~l~~~~~~~~~-~~---~~~~~~~~p~l~~~~~~~~~~p~~~~~ 117 (118)
T cd03187 44 EENEEKLKKVLDVYEARLSK--SKYLAGDSFTLADLSHLPYLQYLMA-TP---FAKLFDSRPHVKAWWEDISARPAWKKV 117 (118)
T ss_pred HHHHHHHHHHHHHHHHHccc--CcccCCCCccHHHHHHHHHHHHHHH-cc---chhhhhcCchHHHHHHHHHhCHHHHhh
Confidence 44567889999999999963 7999999999999999999888752 11 111236899999999999999999875
No 43
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.34 E-value=3.3e-12 Score=85.71 Aligned_cols=76 Identities=24% Similarity=0.407 Sum_probs=63.5
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCcccccc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT 148 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~ 148 (165)
+...+.+.+.+..||+.|++ ++|++|+++|+||+++++.+.++.. . .+.+ ...+|+|.+|+++|.++|+|++.
T Consensus 37 ~~~~~~~~~~l~~le~~L~~--~~~l~G~~~s~aDi~l~~~~~~~~~-~---~~~~-~~~~p~l~~w~~~~~~~p~~~~~ 109 (118)
T cd03177 37 EEKLDKLEEALDFLETFLEG--SDYVAGDQLTIADLSLVATVSTLEA-L---LPLD-LSKYPNVRAWLERLKALPPYEEA 109 (118)
T ss_pred HHHHHHHHHHHHHHHHHHcc--CCeeCCCCcCHHHHHHHHHHHHHHH-h---cCCC-hhhCchHHHHHHHHHcccchHHH
Confidence 66778899999999999963 6899999999999999999988752 1 1233 36799999999999999999986
Q ss_pred CCc
Q 031123 149 KAE 151 (165)
Q Consensus 149 ~~~ 151 (165)
...
T Consensus 110 ~~~ 112 (118)
T cd03177 110 NGK 112 (118)
T ss_pred HHH
Confidence 543
No 44
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.34 E-value=4.1e-12 Score=77.26 Aligned_cols=65 Identities=26% Similarity=0.587 Sum_probs=52.3
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHH
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKK 138 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r 138 (165)
++.++.+.+.++.||+.|.+ ++|++|+++|+||+++++.+.++.. ... +.++.+.+|+|.+|++|
T Consensus 5 ~~~~~~~~~~l~~le~~L~~--~~fl~G~~~s~aD~~l~~~l~~~~~-~~~--~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 5 ERARAQLEAALDALEDHLAD--GPFLFGDRPSLADIALAPFLWRLRF-VGP--DFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHTT--SSBTTBSS--HHHHHHHHHHHHHHH-CTH--TCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhh--CCCCCCCCCCHHHHHHHHHHHHHHH-hCc--CcCccccCHHHHHHHhC
Confidence 46788899999999999975 5799999999999999999999875 221 22345899999999986
No 45
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.33 E-value=4.7e-12 Score=85.80 Aligned_cols=75 Identities=21% Similarity=0.365 Sum_probs=60.7
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhc--Ccccc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFA--LESFQ 146 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~--~p~~~ 146 (165)
+...+.+.+.+..+|++|.+ +++|++|+++|+||+++++.+.++.. . +.+..+++|+|.+|++++.+ +|+|+
T Consensus 44 ~~~~~~~~~~l~~le~~l~~-~~~~l~Gd~~t~ADi~l~~~~~~~~~-~----~~~~~~~~p~l~~w~~~~~~~~~p~~~ 117 (126)
T cd03183 44 KKAEENLEESLDLLENYFLK-DKPFLAGDEISIADLSAVCEIMQPEA-A----GYDVFEGRPKLAAWRKRVKEAGNPLFD 117 (126)
T ss_pred HHHHHHHHHHHHHHHHHHhc-CCCcccCCCCCHHHHHHHHHHHHHHh-c----CCcccccCchHHHHHHHHHHhcchhHH
Confidence 45567889999999997533 26899999999999999998877652 1 23334789999999999999 99999
Q ss_pred ccC
Q 031123 147 KTK 149 (165)
Q Consensus 147 ~~~ 149 (165)
++.
T Consensus 118 ~~~ 120 (126)
T cd03183 118 EAH 120 (126)
T ss_pred HHH
Confidence 854
No 46
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.32 E-value=3.5e-12 Score=84.69 Aligned_cols=74 Identities=15% Similarity=0.256 Sum_probs=62.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCcccccc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT 148 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~ 148 (165)
++..+.+.+.+..+|+.|++ ++|++|+++|+||+++++.+.+... . +.+..+.+|++.+|++++.++|+++++
T Consensus 39 ~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aDi~l~~~~~~~~~-~----~~~~~~~~p~l~~w~~~~~~~p~~~~~ 111 (113)
T cd03178 39 ERYTNEAKRLYGVLDKRLAG--RDYLAGDEYSIADIAIFPWVRRLEW-I----GIDDLDDFPNVKRWLDRIAARPAVQRG 111 (113)
T ss_pred HHHHHHHHHHHHHHHHHHcc--CCcccCCCCCeeeeeHHHHHHHHHh-c----cccchhhchHHHHHHHHHhhCHHHHHh
Confidence 45677889999999999963 7899999999999999998888753 2 223347899999999999999999986
Q ss_pred C
Q 031123 149 K 149 (165)
Q Consensus 149 ~ 149 (165)
.
T Consensus 112 ~ 112 (113)
T cd03178 112 L 112 (113)
T ss_pred c
Confidence 4
No 47
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.31 E-value=4.5e-12 Score=81.05 Aligned_cols=47 Identities=32% Similarity=0.640 Sum_probs=44.0
Q ss_pred ceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecCCCCCC
Q 031123 2 AVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQ 49 (165)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~kp~ 49 (165)
.++||+++++.+.. .+.|||||||||+|.+|||+|+.+.+|+.++|+
T Consensus 5 ~~el~vka~~~~~~-~g~cpf~~rvrl~L~eKgi~ye~~~vd~~~~p~ 51 (91)
T cd03061 5 EIELFVKASSDGES-IGNCPFCQRLFMVLWLKGVVFNVTTVDMKRKPE 51 (91)
T ss_pred cEEEEEEeccCCCC-CCCChhHHHHHHHHHHCCCceEEEEeCCCCCCH
Confidence 47999999998766 999999999999999999999999999999886
No 48
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.31 E-value=1.1e-11 Score=80.84 Aligned_cols=69 Identities=20% Similarity=0.293 Sum_probs=57.5
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESF 145 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~ 145 (165)
++...++.+.+..+|++|++ ++|++|+++|+||+++++.+.+... .+.. .+++|+|.+|++++.++|+|
T Consensus 32 ~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aDi~~~~~~~~~~~-----~~~~-~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 32 ETAIARAHRLLRLLEEHLAG--RDWLAGDRPTIADVAVYPYVALAPE-----GGVD-LEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHcc--CCccCCCCCCHHHHHHHHHHHHHhc-----cCCC-hhhCcHHHHHHHHHHhCcCC
Confidence 56778899999999999974 6899999999999999998876532 1222 37899999999999999975
No 49
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.30 E-value=1.2e-11 Score=82.64 Aligned_cols=70 Identities=26% Similarity=0.426 Sum_probs=58.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESF 145 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~ 145 (165)
++..+++.+.|..||+.|++ ++|++|+++|+||+++++.+.++.. . +.++...+|+|.+|++++.++|++
T Consensus 48 ~~~~~~l~~~l~~le~~L~~--~~~l~gd~~t~aDi~l~~~~~~~~~-~----~~~~~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 48 ERSKARAADFLAYLDTRLAG--SPYVAGDRFTIADITAFVGLDFAKV-V----KLRVPEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHHHHHHHHHHHHhcC--CCcccCCCCCHHHHHHHHHhHHHHh-c----CCCCccccHHHHHHHHHHHhccCC
Confidence 55677899999999999963 6899999999999999999988753 2 234446899999999999999974
No 50
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.29 E-value=1.6e-11 Score=80.90 Aligned_cols=69 Identities=25% Similarity=0.382 Sum_probs=56.3
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESF 145 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~ 145 (165)
+...+.+.+.++.+|++|++ ++|++|+++|+||+++++.+..... . +.. ..++|+|.+|++++.++|+|
T Consensus 42 ~~~~~~~~~~l~~lE~~L~~--~~~l~g~~~t~aDi~~~~~~~~~~~-~----~~~-~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 42 AASLAAWAKLMAILDAQLAG--RPYLAGDRFTLADIPLGCSAYRWFE-L----PIE-RPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHHHHHHHHHHHHHhCC--CCcccCCCCCHHHHHHHHHHHHHHH-c----ccc-cccCchHHHHHHHHHhCCCC
Confidence 34567899999999999974 6899999999999999998754321 1 122 47899999999999999986
No 51
>PLN02907 glutamate-tRNA ligase
Probab=99.28 E-value=3.1e-11 Score=102.67 Aligned_cols=129 Identities=13% Similarity=0.151 Sum_probs=84.8
Q ss_pred CceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecCCCC-CCC--CC--Ccc--HHHHhhhhC---------
Q 031123 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDK-PQC--GS--KIF--PSFVNFLKS--------- 64 (165)
Q Consensus 1 ~~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~k-p~~--~~--~~~--~~~~~~~~~--------- 64 (165)
|+++||+.+++.+ .++.++|++.|++|+.+...+..+ |.+ .. .+. .++..++..
T Consensus 1 ~~~kLy~~~~S~~----------~~v~~~L~~lgv~~e~~~~~p~GkVPvLv~ddG~~L~ES~AIl~YLa~~~p~~~L~p 70 (722)
T PLN02907 1 MEAKLSFPPDSPP----------LAVIAAAKVAGVPLTIDPSLKSGSAPTLLFSSGEKLTGTNVLLRYIARSASLPGFYG 70 (722)
T ss_pred CeEEEEECCCCCh----------HHHHHHHHHcCCCcEEeecCCCCCCcEEEECCCCEEECHHHHHHHHHHhCCCcCCCC
Confidence 7899999998866 679999999999999986443222 221 01 111 011111111
Q ss_pred CCCch--hH------------HHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccch
Q 031123 65 KDPND--GT------------EQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLA 130 (165)
Q Consensus 65 ~~~~~--~~------------~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p 130 (165)
.+..+ +. ...+.+.++.||++|+. ++|++|+++|+||+++++.+....... ......+.||
T Consensus 71 ~d~~erAqV~qWL~~~~~~~~~~~l~~~L~~LE~~L~~--rtYLvGd~lTLADIaL~~~L~~~~~~~---~~~~~~~~yP 145 (722)
T PLN02907 71 QDAFESSQVDEWLDYAPTFSSGSEFENACEYVDGYLAS--RTFLVGYSLTIADIAIWSGLAGSGQRW---ESLRKSKKYQ 145 (722)
T ss_pred CCHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHHhcc--CCeecCCCCCHHHHHHHHHHHhhhhhh---hcccccccCH
Confidence 11100 00 12455678999999964 689999999999999999876652101 1122247899
Q ss_pred HHHHHHHHhhcCcc
Q 031123 131 HVHGYTKKLFALES 144 (165)
Q Consensus 131 ~l~~w~~ri~~~p~ 144 (165)
+|.+|+++|.++|+
T Consensus 146 nL~RW~erI~arPs 159 (722)
T PLN02907 146 NLVRWFNSISAEYS 159 (722)
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999999999
No 52
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.27 E-value=1.3e-11 Score=80.35 Aligned_cols=66 Identities=26% Similarity=0.441 Sum_probs=52.2
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFA 141 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~ 141 (165)
+...+.+.+.++.+|+.|+.++++|++|+++|+||+++++.+..+.. . ++++++|+|.+|++||++
T Consensus 34 ~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~------~-~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 34 DFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRW------A-DFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHC------C-HHTTTCHHHHHHHHHHHT
T ss_pred HhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhh------c-ccccccHHHHHHHHhhcC
Confidence 55678899999999999987545599999999999999998866542 1 122689999999999974
No 53
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.25 E-value=9e-12 Score=83.92 Aligned_cols=80 Identities=18% Similarity=0.184 Sum_probs=64.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCcccccc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT 148 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~ 148 (165)
+...+.+.+.++.+|+.|+. ++|++|+++|+||+++++.+.++.. .. .+..+.+.+|++.+|++++.++|+|+++
T Consensus 39 ~~~~~~~~~~l~~le~~l~~--~~~l~G~~~siaDi~l~~~~~~~~~-~~--~~~~~~~~~p~l~~w~~~~~~~p~~~~~ 113 (123)
T cd03181 39 EAALEELDRVLGVLEERLLK--RTYLVGERLTLADIFVAGALLLGFT-YV--FDKEWRAKYPNVTRWFNTVVNQPIFKAV 113 (123)
T ss_pred HHHHHHHHHHHHHHHHHHcc--CceeccCCccHHHHHHHHHHHHHHH-HH--cCHHHHHhChHHHHHHHHHHcCHHHHHH
Confidence 45677889999999999974 6899999999999999999888642 11 1111236799999999999999999998
Q ss_pred CCchH
Q 031123 149 KAEKQ 153 (165)
Q Consensus 149 ~~~~~ 153 (165)
..+.+
T Consensus 114 ~~~~~ 118 (123)
T cd03181 114 FGEVK 118 (123)
T ss_pred cCCCC
Confidence 77654
No 54
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.24 E-value=3.7e-11 Score=80.50 Aligned_cols=67 Identities=19% Similarity=0.230 Sum_probs=55.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALE 143 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p 143 (165)
+...+.+.+.++.||++|++ ++|++|+++|+||+++++.+.++.. . +.. .+.+|+|.+|++++.++|
T Consensus 53 ~~~~~~~~~~l~~le~~L~~--~~~l~Gd~~t~ADi~l~~~~~~~~~-~----~~~-~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 53 GFINPELKKHLDFLEDRLAK--KGYFVGDKLTAADIMMSFPLEAALA-R----GPL-LEKYPNIAAYLERIEARP 119 (119)
T ss_pred HHHhHHHHHHHHHHHHHHcc--CCCCCCCCCCHHHHHHHHHHHHHHH-c----Ccc-cccCchHHHHHHHHhcCC
Confidence 34566789999999999974 6899999999999999998888753 2 122 478999999999999987
No 55
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.20 E-value=6.7e-11 Score=80.26 Aligned_cols=67 Identities=15% Similarity=0.242 Sum_probs=56.3
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFA 141 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~ 141 (165)
+...+.+.+.++.+|++|.+ ++|++|+++|+||+++++.+.++.. .. +.++.+++|+|.+|++||.+
T Consensus 57 ~~~~~~~~~~l~~l~~~L~~--~~fl~Gd~~t~AD~~l~~~l~~~~~-~~---~~~~~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 57 EAALANFRAALEPLRATLKG--QPFLGGAAPNYADYIVFGGFQWARI-VS---PFPLLEEDDPVYDWFERCLD 123 (124)
T ss_pred HHHHHHHHHHHHHHHHHHcC--CCccCCCCCchhHHHHHHHHHHHHH-cC---cccccccCChHHHHHHHHhc
Confidence 56778899999999999964 7899999999999999999988763 21 23445789999999999976
No 56
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.18 E-value=1.1e-10 Score=78.14 Aligned_cols=72 Identities=19% Similarity=0.335 Sum_probs=56.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhC-CCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccccc
Q 031123 69 DGTEQALLEELKALDEHLKTH-GGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQK 147 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~-~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~ 147 (165)
+...+.+.+.++.+|..++.. +++|++|+ +|+||+++++.+.++.. . +.+. .|+|.+|++|+.++|++++
T Consensus 40 ~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~-~----~~~~---~P~l~~~~~rv~~rPsv~~ 110 (114)
T cd03194 40 EAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRT-Y----GLPL---SPAAQAYVDALLAHPAMQE 110 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHH-c----CCCC---CHHHHHHHHHHHCCHHHHH
Confidence 455666777788888777532 46899999 99999999999988752 2 2232 2999999999999999998
Q ss_pred cC
Q 031123 148 TK 149 (165)
Q Consensus 148 ~~ 149 (165)
.+
T Consensus 111 ~~ 112 (114)
T cd03194 111 WI 112 (114)
T ss_pred HH
Confidence 65
No 57
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.17 E-value=1.3e-10 Score=77.61 Aligned_cols=71 Identities=18% Similarity=0.187 Sum_probs=59.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCcccccc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT 148 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~ 148 (165)
+...+.+.+.+..+|.+|.+ +++|++| ++|+||+++++.+.|+.. . ++++ + |++.+|.+|+.++|+|+++
T Consensus 41 ~~~~~~~~~~~~~le~~l~~-~~~~l~G-~fSiAD~~l~~~~~~~~~-~----g~~l-~--p~l~ay~~r~~~rPa~~~~ 110 (114)
T cd03195 41 EAAQAAAEKLIAVAEALLPP-GAANLFG-EWCIADTDLALMLNRLVL-N----GDPV-P--ERLRDYARRQWQRPSVQAW 110 (114)
T ss_pred HHHHHHHHHHHHHHHHHHhc-CCCcccC-CccHHHHHHHHHHHHHHH-c----CCCC-C--HHHHHHHHHHHCCHHHHHH
Confidence 56677889999999999963 3589999 599999999999998863 2 4454 3 9999999999999999987
Q ss_pred C
Q 031123 149 K 149 (165)
Q Consensus 149 ~ 149 (165)
.
T Consensus 111 ~ 111 (114)
T cd03195 111 L 111 (114)
T ss_pred H
Confidence 5
No 58
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=99.13 E-value=1.1e-10 Score=86.76 Aligned_cols=70 Identities=16% Similarity=0.288 Sum_probs=54.2
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCC-C-CCccchHHHHHHHHhhcC
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQW-T-VPESLAHVHGYTKKLFAL 142 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~-~-~~~~~p~l~~w~~ri~~~ 142 (165)
++..+.+.+-+..++..|+. ++|+.|+++|-+|+.+++.|..+-. +..... + +..++|+|..|.+||++.
T Consensus 202 ~Ei~ell~rDlr~i~~~Lg~--KkflfGdkit~~DatvFgqLa~v~Y--P~~~~i~d~le~d~p~l~eYceRIr~~ 273 (281)
T KOG4244|consen 202 AEIDELLHRDLRAISDYLGD--KKFLFGDKITPADATVFGQLAQVYY--PFRSHISDLLEGDFPNLLEYCERIRKE 273 (281)
T ss_pred HHHHHHHHHHHHHHHHHhCC--CccccCCCCCcceeeehhhhhheec--cCCCcHHHHHhhhchHHHHHHHHHHHH
Confidence 45666778889999999963 7999999999999999998887642 211111 2 248899999999999873
No 59
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.04 E-value=8.4e-10 Score=70.99 Aligned_cols=66 Identities=24% Similarity=0.495 Sum_probs=53.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHh
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKL 139 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri 139 (165)
+...+.+.+.++.||++|++ ++|++|+++|+||+++++++.++.. .... ..+.+.+|++.+|++++
T Consensus 35 ~~~~~~~~~~~~~l~~~L~~--~~~~~g~~~t~aDi~~~~~l~~~~~-~~~~--~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 35 EEAREELAAALAALEKLLAG--RPYLAGDRFSLADIALAPVLARLDL-LGPL--LGLLDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHcc--CCCCCCCCcCHHHHHHHHHHHHHHH-hhhh--hhhhccCccHHHHHHhC
Confidence 56678899999999999974 6899999999999999999999874 2211 11347899999999875
No 60
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.02 E-value=1.4e-09 Score=69.14 Aligned_cols=67 Identities=18% Similarity=0.253 Sum_probs=52.0
Q ss_pred hHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccC--C-CCCccchHHHHHHHHhh
Q 031123 70 GTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQ--W-TVPESLAHVHGYTKKLF 140 (165)
Q Consensus 70 ~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~--~-~~~~~~p~l~~w~~ri~ 140 (165)
+..+++.+.++.+|+.|++ ++|++|+++|+||+++++.+.++.. .. ... . ...+++|+|.+|++|+.
T Consensus 19 ~~~~~~~~~l~~le~~L~~--~~yl~Gd~~t~aDi~l~~~l~~~~~-~~-~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 19 EIYSLAKKDLKALSDLLGD--KKFFFGDKPTSLDATVFGHLASILY-AP-LPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHhCC--CCccCCCCCCHHHHHHHHHHHHHHh-cC-CCChHHHHHHHhCcHHHHHHHHhC
Confidence 5577889999999999974 6899999999999999999888752 11 110 0 01267999999999974
No 61
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.01 E-value=7.6e-10 Score=72.29 Aligned_cols=64 Identities=16% Similarity=0.198 Sum_probs=53.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhh
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLF 140 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~ 140 (165)
+...+++.+.++.||+.|++ ++|++|+++|+||+++++.+.++.. . +.+ ..++|+|.+|+++++
T Consensus 42 ~~~~~~~~~~l~~le~~L~~--~~~l~g~~~slaDi~~~~~~~~~~~-~----~~~-~~~~p~l~~~~~~~~ 105 (105)
T cd03179 42 AFLRERGHAALAVLEAHLAG--RDFLVGDALTIADIALAAYTHVADE-G----GFD-LADYPAIRAWLARIE 105 (105)
T ss_pred HHHHHHHHHHHHHHHHHHcc--CccccCCCCCHHHHHHHHHHHhccc-c----CCC-hHhCccHHHHHHhhC
Confidence 55677889999999999963 6899999999999999999988752 1 233 478999999999874
No 62
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=98.98 E-value=1.8e-09 Score=70.61 Aligned_cols=66 Identities=24% Similarity=0.361 Sum_probs=52.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCC-CccchHHHHHHHHh
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTV-PESLAHVHGYTKKL 139 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~-~~~~p~l~~w~~ri 139 (165)
+...+.+.+.+..||++|.+++++|++|+++|+||+++++.+.++.. .. ... ...+|+|.+|++++
T Consensus 38 ~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~~~~~-~~----~~~~~~~~p~l~~~~~~~ 104 (104)
T cd03192 38 EFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLDYLLY-LD----PKLLLKKYPKLKALRERV 104 (104)
T ss_pred HHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHHHHHh-hC----chhhHHhChhHHHHHHhC
Confidence 44567788999999999974236899999999999999999988763 21 121 47899999999875
No 63
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.98 E-value=1.5e-09 Score=75.22 Aligned_cols=67 Identities=16% Similarity=0.208 Sum_probs=54.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCC-CCCccchHHHHHHHHhhc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQW-TVPESLAHVHGYTKKLFA 141 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~-~~~~~~p~l~~w~~ri~~ 141 (165)
+..++.+.+.++.+-+.+.++ ++|++|+++|+||+++++.+..+.. +. ++ ++ .++|+|.+|++||++
T Consensus 78 ~D~r~~L~~a~~~w~~~~~~~-~~FlaGd~ptIADisvyg~l~s~e~-~~---~~~Dl-~~~p~I~~W~eRm~~ 145 (149)
T cd03197 78 DDVREWLYDALNTWVAALGKD-RQFHGGSKPNLADLAVYGVLRSVEG-HP---AFKDM-VEETKIGEWYERMDA 145 (149)
T ss_pred chHHHHHHHHHHHHHHHhcCC-CCccCCCCCCHHHHHHHHHHHHHHH-hc---cccch-hhCcCHHHHHHHHHH
Confidence 456888888888777777643 7899999999999999999988864 32 34 54 689999999999986
No 64
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=98.95 E-value=3e-09 Score=68.94 Aligned_cols=59 Identities=22% Similarity=0.283 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcC
Q 031123 73 QALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFAL 142 (165)
Q Consensus 73 ~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~ 142 (165)
+++.+.+..+|++|.+ ++|++|+++|+|||++++.+.+. +.. .+.+|+|.+|++||.++
T Consensus 38 ~~~~~~l~~le~~L~~--~~fl~Gd~~tiADi~l~~~l~~~--------~~~-~~~~p~l~~w~~r~~~~ 96 (96)
T cd03200 38 KEKAAVLRALNSALGR--SPWLVGSEFTVADIVSWCALLQT--------GLA-SAAPANVQRWLKSCENL 96 (96)
T ss_pred HHHHHHHHHHHHHHcC--CCccCCCCCCHHHHHHHHHHHHc--------ccc-cccChHHHHHHHHHHhC
Confidence 4566788999999974 68999999999999999877542 122 26799999999999763
No 65
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=98.89 E-value=1.1e-08 Score=72.10 Aligned_cols=66 Identities=17% Similarity=0.259 Sum_probs=49.9
Q ss_pred hHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccc
Q 031123 70 GTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESF 145 (165)
Q Consensus 70 ~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~ 145 (165)
....++...+..+++.+.+. + -....+|.-|+.++|+++.+.. .+ ++.|+ .++..|..+|.+...+
T Consensus 142 ~~~~~i~~dl~~l~~Li~~~-s--~~n~~l~~ddi~vFplLRnlt~-v~---gi~wp---s~v~dy~~~msektqV 207 (215)
T COG2999 142 QYLKRIQADLRALDKLIVGP-S--AVNGELSEDDILVFPLLRNLTL-VA---GIQWP---SRVADYRDNMSEKTQV 207 (215)
T ss_pred HHHHHHHHHHHHHHHHhcCc-c--hhccccchhhhhhhHHhcccee-cc---cCCCc---HHHHHHHHHHHHhhCc
Confidence 34667888999999998743 3 3356799999999999999874 22 44554 7899999999876544
No 66
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.76 E-value=3.3e-08 Score=64.06 Aligned_cols=63 Identities=14% Similarity=0.209 Sum_probs=49.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHh
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKL 139 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri 139 (165)
+...+.+.+.+..+|++|++ ++| +++|+||+++++.+.+..... .+.+..+++|+|.+|++||
T Consensus 36 ~~~~~~~~~~l~~le~~L~~--~~~---d~~TlADi~l~~~l~~~~~~~---~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 36 ERQRGKIERALDALEAELAK--LPL---DPLDLADIAVACALGYLDFRH---PDLDWRAAHPALAAWYARF 98 (98)
T ss_pred HHHHHHHHHHHHHHHHhhhh--CCC---CCCCHHHHHHHHHHHHHHhHc---cCcchhhhChHHHHHHHhC
Confidence 55678899999999999964 577 899999999999998875311 1223347899999999986
No 67
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.73 E-value=1.4e-08 Score=69.09 Aligned_cols=69 Identities=16% Similarity=0.312 Sum_probs=53.7
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHH-hhhccCCC-CCccchHHHHHHHHhh
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVA-LEHFKQWT-VPESLAHVHGYTKKLF 140 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~-~~~~~~~~-~~~~~p~l~~w~~ri~ 140 (165)
++..+...+.++.|++.|++ ++|++|+++|.+|+++++.+.++... .+. .... ...++|+|.+|++||.
T Consensus 56 ee~~~~~~~~l~aLs~~Lg~--~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~-~~l~~~~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 56 DQVIEEVDQCCQALSQRLGT--QPYFFGDQPTELDALVFGHLFTILTTQLPN-DELAEKVKKYSNLLAFCRRIE 126 (126)
T ss_pred HHHHHHHHHHHHHHHHHHCC--CCCCCCCCCcHHHHHHHHHHHHHHhcCCCC-hHHHHHHHhCcHHHHHHHhcC
Confidence 67788889999999999974 79999999999999999998887421 100 0111 2478999999999973
No 68
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=98.72 E-value=2.8e-08 Score=62.61 Aligned_cols=44 Identities=20% Similarity=0.276 Sum_probs=39.7
Q ss_pred eEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecCCCCC
Q 031123 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKP 48 (165)
Q Consensus 3 ~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~kp 48 (165)
|+||.+++..+ -..+||||+|||++|.++||+|+.+.+++.+++
T Consensus 1 ~~~~~~~~~~~--~~~~Sp~~~kv~~~L~~~~i~~~~~~~~~~~~~ 44 (84)
T cd03038 1 ITLYDLAGKDP--VRAFSPNVWKTRLALNHKGLEYKTVPVEFPDIP 44 (84)
T ss_pred CeeEeccCCCC--CCCcCChhHHHHHHHHhCCCCCeEEEecCCCcc
Confidence 68999999988 589999999999999999999999999876544
No 69
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=98.67 E-value=4.8e-08 Score=60.27 Aligned_cols=42 Identities=12% Similarity=0.201 Sum_probs=38.4
Q ss_pred ceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecCC
Q 031123 2 AVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINIS 45 (165)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~ 45 (165)
|++||.++++.+ ...+||||+||+++|+++|++|+.+.++..
T Consensus 1 m~~L~~~~~~~~--~~~~sp~~~~v~~~L~~~gi~~~~~~~~~~ 42 (75)
T cd03080 1 MITLYQFPRAFG--VPSLSPFCLKVETFLRMAGIPYENKFGGLA 42 (75)
T ss_pred CEEEEecCCCCC--CCCCCHHHHHHHHHHHHCCCCcEEeecCcc
Confidence 579999999988 778999999999999999999999988763
No 70
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.64 E-value=1.1e-07 Score=65.49 Aligned_cols=69 Identities=14% Similarity=0.156 Sum_probs=53.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCC---CCCccchHHHHHHHHhhc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQW---TVPESLAHVHGYTKKLFA 141 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~---~~~~~~p~l~~w~~ri~~ 141 (165)
++..+...+.++.|++.|++ ++|++|+++|.+|+++++++..+.. . ..... ....++|+|.+|++||.+
T Consensus 63 ~~~~~~a~~~l~~l~~~L~~--~~~~~Gd~~t~~D~~~~~~l~~~~~-~-~~~~~~l~~~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 63 AEIYRDAKECLNLLSQRLGE--SQFFFGDTPTSLDALVFGYLAPLLK-A-PLPNNKLQNHLKQCPNLCRFCDRILS 134 (137)
T ss_pred HHHHHHHHHHHHHHHHHHCC--CCcCCCCCCcHHHHHHHHHHHHHHh-c-cCCChHHHHHHHHCcHHHHHHHHHHH
Confidence 56677788899999999974 7999999999999999998877642 1 11110 113789999999999975
No 71
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=98.56 E-value=8.9e-08 Score=58.36 Aligned_cols=34 Identities=21% Similarity=0.436 Sum_probs=30.1
Q ss_pred CCCCCCcHHHHHHHHHHhCCCCceEEeecCCCCC
Q 031123 15 DILGDCPFSQRALLTLEEKKVPYKRHLINISDKP 48 (165)
Q Consensus 15 ~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~kp 48 (165)
|++.+||||+||+++|+++|++|+.+.+++.+++
T Consensus 4 y~~~~~p~~~rv~~~L~~~gl~~e~~~v~~~~~~ 37 (71)
T cd03060 4 YSFRRCPYAMRARMALLLAGITVELREVELKNKP 37 (71)
T ss_pred EecCCCcHHHHHHHHHHHcCCCcEEEEeCCCCCC
Confidence 5678899999999999999999999999876543
No 72
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=98.52 E-value=2.3e-07 Score=56.65 Aligned_cols=41 Identities=12% Similarity=0.078 Sum_probs=37.2
Q ss_pred eEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecCC
Q 031123 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINIS 45 (165)
Q Consensus 3 ~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~ 45 (165)
++||..++..+ ..-+||||+|++++|+++||+|+.+.++..
T Consensus 1 ~~L~~~~~~~~--~~s~sp~~~~v~~~L~~~~i~~~~~~~~~~ 41 (72)
T cd03054 1 LELYQWGRAFG--LPSLSPECLKVETYLRMAGIPYEVVFSSNP 41 (72)
T ss_pred CEEEEeCCCCC--CCCCCHHHHHHHHHHHhCCCceEEEecCCc
Confidence 47999999777 788999999999999999999999999864
No 73
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=98.38 E-value=4e-07 Score=55.37 Aligned_cols=30 Identities=23% Similarity=0.483 Sum_probs=26.6
Q ss_pred CCCCCCcHHHHHHHHHHhCCCCceEEeecC
Q 031123 15 DILGDCPFSQRALLTLEEKKVPYKRHLINI 44 (165)
Q Consensus 15 ~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~ 44 (165)
|++..||||+|||++|.++|++|+.+.++.
T Consensus 4 y~~~~~p~~~rvr~~L~~~gl~~~~~~~~~ 33 (71)
T cd03037 4 YIYEHCPFCVKARMIAGLKNIPVEQIILQN 33 (71)
T ss_pred EecCCCcHhHHHHHHHHHcCCCeEEEECCC
Confidence 456778999999999999999999998874
No 74
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=98.35 E-value=1.6e-07 Score=57.88 Aligned_cols=33 Identities=33% Similarity=0.520 Sum_probs=29.8
Q ss_pred CCCCCCcHHHHHHHHHHhCCCCceEEeecCCCC
Q 031123 15 DILGDCPFSQRALLTLEEKKVPYKRHLINISDK 47 (165)
Q Consensus 15 ~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~k 47 (165)
+++..||||+|||++|+++||+|+.+.++..++
T Consensus 2 y~~~~Sp~~~kv~~~l~~~~i~~~~~~v~~~~~ 34 (75)
T PF13417_consen 2 YGFPGSPYSQKVRLALEEKGIPYELVPVDPEEK 34 (75)
T ss_dssp EEETTSHHHHHHHHHHHHHTEEEEEEEEBTTST
T ss_pred CCcCCChHHHHHHHHHHHcCCeEEEeccCcccc
Confidence 467789999999999999999999999997765
No 75
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=98.26 E-value=1.1e-06 Score=53.42 Aligned_cols=32 Identities=22% Similarity=0.164 Sum_probs=27.4
Q ss_pred CCCCCcHHHHHHHHHHhCCCCceEEeecCCCC
Q 031123 16 ILGDCPFSQRALLTLEEKKVPYKRHLINISDK 47 (165)
Q Consensus 16 ~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~k 47 (165)
+...||+|+|++++|+++|++|+.+.+++.++
T Consensus 5 ~~~~~~~~~~v~~~l~~~gi~~~~~~v~~~~~ 36 (73)
T cd03059 5 SGPDDVYSHRVRIVLAEKGVSVEIIDVDPDNP 36 (73)
T ss_pred ECCCChhHHHHHHHHHHcCCccEEEEcCCCCC
Confidence 44568889999999999999999999987644
No 76
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=98.24 E-value=9.3e-07 Score=53.77 Aligned_cols=26 Identities=35% Similarity=0.708 Sum_probs=23.2
Q ss_pred CCcHHHHHHHHHHhCCCCceEEeecC
Q 031123 19 DCPFSQRALLTLEEKKVPYKRHLINI 44 (165)
Q Consensus 19 ~cP~~~rvr~~l~~~gi~ye~~~v~~ 44 (165)
+||||+||+++|+++||+|+.+.++.
T Consensus 1 ~sP~a~Rv~i~l~~~gl~~~~~~v~~ 26 (70)
T PF13409_consen 1 FSPFAHRVRIALEEKGLPYEIKVVPL 26 (70)
T ss_dssp T-HHHHHHHHHHHHHTGTCEEEEEET
T ss_pred CchHhHHHHHHHHHhCCCCEEEEEee
Confidence 69999999999999999999998854
No 77
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=98.22 E-value=1.6e-06 Score=52.67 Aligned_cols=31 Identities=16% Similarity=0.178 Sum_probs=26.6
Q ss_pred CCCCCcHHHHHHHHHHhCCCCceEEeecCCC
Q 031123 16 ILGDCPFSQRALLTLEEKKVPYKRHLINISD 46 (165)
Q Consensus 16 ~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~ 46 (165)
+.+.||||+|+|++|+++|++|+.+.++...
T Consensus 5 ~~~~s~~~~~~~~~L~~~~l~~~~~~v~~~~ 35 (74)
T cd03051 5 DSPTAPNPRRVRIFLAEKGIDVPLVTVDLAA 35 (74)
T ss_pred eCCCCcchHHHHHHHHHcCCCceEEEeeccc
Confidence 4456777999999999999999999998654
No 78
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.21 E-value=2e-06 Score=52.71 Aligned_cols=32 Identities=19% Similarity=0.319 Sum_probs=29.5
Q ss_pred CCCCCCcHHHHHHHHHHhCCCCceEEeecCCC
Q 031123 15 DILGDCPFSQRALLTLEEKKVPYKRHLINISD 46 (165)
Q Consensus 15 ~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~ 46 (165)
++.++||+|+||+++|+++||+|+.+.+++.+
T Consensus 5 ~~~~~s~~s~~v~~~L~~~gl~~e~~~v~~~~ 36 (73)
T cd03043 5 GNKNYSSWSLRPWLLLKAAGIPFEEILVPLYT 36 (73)
T ss_pred cCCCCCHHHHHHHHHHHHcCCCCEEEEeCCCC
Confidence 58899999999999999999999999998754
No 79
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=98.18 E-value=2.3e-06 Score=52.40 Aligned_cols=32 Identities=28% Similarity=0.344 Sum_probs=27.0
Q ss_pred CCCCCcHHHHHHHHHHhCCCCceEEeecCCCC
Q 031123 16 ILGDCPFSQRALLTLEEKKVPYKRHLINISDK 47 (165)
Q Consensus 16 ~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~k 47 (165)
++..||||+|+|++|+++|++|+.+.+++..+
T Consensus 5 ~~~~sp~~~~v~~~l~~~gl~~~~~~~~~~~~ 36 (74)
T cd03058 5 GAWASPFVLRVRIALALKGVPYEYVEEDLGNK 36 (74)
T ss_pred ECCCCchHHHHHHHHHHcCCCCEEEEeCcccC
Confidence 34457889999999999999999999887644
No 80
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.17 E-value=2.2e-06 Score=53.04 Aligned_cols=33 Identities=15% Similarity=0.082 Sum_probs=27.2
Q ss_pred ceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 2 AVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
||+||+.+ .||||+||+++|.++||+|+.+.++
T Consensus 1 ~~~Ly~~~---------~sp~~~kv~~~L~~~gi~y~~~~v~ 33 (77)
T cd03041 1 PLELYEFE---------GSPFCRLVREVLTELELDVILYPCP 33 (77)
T ss_pred CceEecCC---------CCchHHHHHHHHHHcCCcEEEEECC
Confidence 36777655 4667999999999999999998875
No 81
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=98.17 E-value=3.9e-06 Score=51.21 Aligned_cols=31 Identities=19% Similarity=0.219 Sum_probs=26.0
Q ss_pred CCCCcHHHHHHHHHHhCCCCceEEeecCCCC
Q 031123 17 LGDCPFSQRALLTLEEKKVPYKRHLINISDK 47 (165)
Q Consensus 17 ~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~k 47 (165)
.+.||+|+||+++|+++|++|+.+.+++.+.
T Consensus 6 ~~~~~~~~~v~~~l~~~gi~~e~~~i~~~~~ 36 (74)
T cd03045 6 LPGSPPCRAVLLTAKALGLELNLKEVNLMKG 36 (74)
T ss_pred CCCCCcHHHHHHHHHHcCCCCEEEEecCccC
Confidence 3445669999999999999999999987554
No 82
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=98.15 E-value=4.1e-06 Score=53.34 Aligned_cols=31 Identities=42% Similarity=0.681 Sum_probs=26.8
Q ss_pred CCCCcHHHHHHHHHHhCCCCceEEeecCCCC
Q 031123 17 LGDCPFSQRALLTLEEKKVPYKRHLINISDK 47 (165)
Q Consensus 17 ~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~k 47 (165)
...||||+||+++|.++|++|+.+.++...+
T Consensus 24 ~~~sp~~~kv~~~L~~~gl~~~~~~v~~~~~ 54 (89)
T cd03055 24 MRFCPYAQRARLVLAAKNIPHEVININLKDK 54 (89)
T ss_pred CCCCchHHHHHHHHHHcCCCCeEEEeCCCCC
Confidence 4567889999999999999999999987544
No 83
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=98.14 E-value=4.3e-06 Score=51.26 Aligned_cols=29 Identities=17% Similarity=0.121 Sum_probs=24.7
Q ss_pred CCCcHHHHHHHHHHhCCCCceEEeecCCC
Q 031123 18 GDCPFSQRALLTLEEKKVPYKRHLINISD 46 (165)
Q Consensus 18 ~~cP~~~rvr~~l~~~gi~ye~~~v~~~~ 46 (165)
..||+|+|||++|+++|++|+.+.+++..
T Consensus 7 ~~s~~s~rv~~~L~e~gl~~e~~~v~~~~ 35 (73)
T cd03052 7 TQSFSSQKVRLVIAEKGLRCEEYDVSLPL 35 (73)
T ss_pred CCCccHHHHHHHHHHcCCCCEEEEecCCc
Confidence 34555999999999999999999998754
No 84
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=98.09 E-value=3.6e-06 Score=51.91 Aligned_cols=28 Identities=25% Similarity=0.472 Sum_probs=24.5
Q ss_pred CCCcHHHHHHHHHHhCCCCceEEeecCC
Q 031123 18 GDCPFSQRALLTLEEKKVPYKRHLINIS 45 (165)
Q Consensus 18 ~~cP~~~rvr~~l~~~gi~ye~~~v~~~ 45 (165)
..||||+|||++|.++||+|+.+.+++.
T Consensus 8 ~~~p~c~kv~~~L~~~gi~y~~~~~~~~ 35 (77)
T cd03040 8 KTCPFCCKVRAFLDYHGIPYEVVEVNPV 35 (77)
T ss_pred CCCHHHHHHHHHHHHCCCceEEEECCch
Confidence 3478899999999999999999988754
No 85
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.06 E-value=8.6e-06 Score=49.38 Aligned_cols=31 Identities=16% Similarity=0.088 Sum_probs=25.9
Q ss_pred CCCCCcHHHHHHHHHHhCCCCceEEeecCCC
Q 031123 16 ILGDCPFSQRALLTLEEKKVPYKRHLINISD 46 (165)
Q Consensus 16 ~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~ 46 (165)
.++.||+|+|++++|+++|++|+.+.+++..
T Consensus 5 ~~~~~~~~~~v~~~l~~~~~~~~~~~i~~~~ 35 (73)
T cd03056 5 GFPLSGNCYKVRLLLALLGIPYEWVEVDILK 35 (73)
T ss_pred eCCCCccHHHHHHHHHHcCCCcEEEEecCCC
Confidence 3445666999999999999999999998643
No 86
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=98.04 E-value=9.1e-06 Score=48.19 Aligned_cols=30 Identities=33% Similarity=0.513 Sum_probs=25.8
Q ss_pred CCCcHHHHHHHHHHhCCCCceEEeecCCCC
Q 031123 18 GDCPFSQRALLTLEEKKVPYKRHLINISDK 47 (165)
Q Consensus 18 ~~cP~~~rvr~~l~~~gi~ye~~~v~~~~k 47 (165)
+.||+|++++++|+++|++|+.+.++....
T Consensus 7 ~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~ 36 (71)
T cd00570 7 PGSPRSLRVRLALEEKGLPYELVPVDLGEG 36 (71)
T ss_pred CCCccHHHHHHHHHHcCCCcEEEEeCCCCC
Confidence 347889999999999999999999986543
No 87
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=98.03 E-value=1.1e-05 Score=50.17 Aligned_cols=35 Identities=23% Similarity=0.428 Sum_probs=29.3
Q ss_pred ceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecCCC
Q 031123 2 AVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISD 46 (165)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~ 46 (165)
|++||..++ ++ |+|||++|+++||+|+.+.+++..
T Consensus 1 ~~~Ly~~~~-~~---------~~~v~~~l~~~gl~~~~~~~~~~~ 35 (81)
T cd03048 1 MITLYTHGT-PN---------GFKVSIMLEELGLPYEIHPVDISK 35 (81)
T ss_pred CeEEEeCCC-CC---------hHHHHHHHHHcCCCcEEEEecCcC
Confidence 478887654 44 899999999999999999998653
No 88
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=98.01 E-value=7.3e-06 Score=49.84 Aligned_cols=35 Identities=17% Similarity=0.178 Sum_probs=28.5
Q ss_pred eEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecCCC
Q 031123 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISD 46 (165)
Q Consensus 3 ~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~ 46 (165)
++||+.+.+. +|++||++|+++|++|+.+.+++.+
T Consensus 1 ~~Ly~~~~~~---------~~~~v~~~l~~~gi~~e~~~~~~~~ 35 (72)
T cd03039 1 YKLTYFNIRG---------RGEPIRLLLADAGVEYEDVRITYEE 35 (72)
T ss_pred CEEEEEcCcc---------hHHHHHHHHHHCCCCcEEEEeCHHH
Confidence 4677665554 4999999999999999999998643
No 89
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=97.98 E-value=1.1e-05 Score=49.17 Aligned_cols=32 Identities=13% Similarity=0.104 Sum_probs=26.6
Q ss_pred CCCCCcHHHHHHHHHHh--CCCCceEEeecCCCC
Q 031123 16 ILGDCPFSQRALLTLEE--KKVPYKRHLINISDK 47 (165)
Q Consensus 16 ~~~~cP~~~rvr~~l~~--~gi~ye~~~v~~~~k 47 (165)
....||||+|+|++|.+ +|++|+.+.+|..++
T Consensus 5 ~~~~s~~~~~~~~~l~~~~~~i~~~~~~~~~~~~ 38 (73)
T cd03049 5 YSPTSPYVRKVRVAAHETGLGDDVELVLVNPWSD 38 (73)
T ss_pred cCCCCcHHHHHHHHHHHhCCCCCcEEEEcCcccC
Confidence 44567779999999999 899999999986543
No 90
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=97.95 E-value=1.9e-05 Score=48.37 Aligned_cols=30 Identities=30% Similarity=0.413 Sum_probs=25.6
Q ss_pred CCCCcHHHHHHHHHHhCCCCceEEeecCCC
Q 031123 17 LGDCPFSQRALLTLEEKKVPYKRHLINISD 46 (165)
Q Consensus 17 ~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~ 46 (165)
.+.||+|+|+|++|+++|++|+.+.+++..
T Consensus 7 ~~~s~~s~~v~~~l~~~~i~~~~~~~~~~~ 36 (76)
T cd03053 7 AAMSTCVRRVLLCLEEKGVDYELVPVDLTK 36 (76)
T ss_pred CCCChhHHHHHHHHHHcCCCcEEEEeCccc
Confidence 345666999999999999999999998754
No 91
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=97.93 E-value=1.7e-05 Score=48.74 Aligned_cols=31 Identities=16% Similarity=0.184 Sum_probs=25.7
Q ss_pred CCCCcHHHHHHHHHHhCCCCceEEeecCCCC
Q 031123 17 LGDCPFSQRALLTLEEKKVPYKRHLINISDK 47 (165)
Q Consensus 17 ~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~k 47 (165)
.+.||+|++|+++|+++|++|+.+.+++.++
T Consensus 6 ~~~s~~~~~v~~~l~~~g~~~~~~~v~~~~~ 36 (76)
T cd03050 6 DLMSQPSRAVYIFLKLNKIPFEECPIDLRKG 36 (76)
T ss_pred CCCChhHHHHHHHHHHcCCCcEEEEecCCCC
Confidence 3345559999999999999999999987554
No 92
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=97.91 E-value=2.6e-05 Score=48.69 Aligned_cols=37 Identities=30% Similarity=0.513 Sum_probs=31.7
Q ss_pred CceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecCCC
Q 031123 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISD 46 (165)
Q Consensus 1 ~~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~ 46 (165)
|.|++|++++ ||||.++.-+|..+|++|+.+.++...
T Consensus 1 ~~v~iyt~~~---------CPyC~~ak~~L~~~g~~~~~i~~~~~~ 37 (80)
T COG0695 1 ANVTIYTKPG---------CPYCKRAKRLLDRKGVDYEEIDVDDDE 37 (80)
T ss_pred CCEEEEECCC---------CchHHHHHHHHHHcCCCcEEEEecCCc
Confidence 5678887766 999999999999999999999887544
No 93
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=97.88 E-value=2.8e-05 Score=47.42 Aligned_cols=27 Identities=26% Similarity=0.257 Sum_probs=23.2
Q ss_pred CCcHHHHHHHHHHhCCCCceEEeecCC
Q 031123 19 DCPFSQRALLTLEEKKVPYKRHLINIS 45 (165)
Q Consensus 19 ~cP~~~rvr~~l~~~gi~ye~~~v~~~ 45 (165)
.||+++|||++|+++|++|+.+.++..
T Consensus 8 ~s~~~~~v~~~L~~~~l~~~~~~~~~~ 34 (73)
T cd03047 8 SSINVQKVLWLLDELGLPYERIDAGGQ 34 (73)
T ss_pred CCcchHHHHHHHHHcCCCCEEEEeccc
Confidence 345599999999999999999998753
No 94
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=97.82 E-value=6.3e-05 Score=49.65 Aligned_cols=72 Identities=22% Similarity=0.273 Sum_probs=52.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCcccccc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT 148 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~~~~ 148 (165)
+.....+.+.+...+.+|.. +++|++| +.|+||..+++.+.++.. . +.++ .+.+..|.++.-++|+++++
T Consensus 42 ~~a~~~a~kL~~~a~~ll~~-g~~~LFG-ewsIAD~dlA~ml~Rl~~-~----gd~v---P~~l~~Ya~~qwqrpsVQ~W 111 (117)
T PF14834_consen 42 EAAQAAAQKLIAVAERLLAD-GGPNLFG-EWSIADADLALMLNRLVT-Y----GDPV---PERLADYAERQWQRPSVQRW 111 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTTT---SSTTS-S--HHHHHHHHHHHHHHT-T----T-------HHHHHHHHHHHT-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcc-CCCCccc-cchHHHHHHHHHHHHHHH-c----CCCC---CHHHHHHHHHHHCCHHHHHH
Confidence 66777788888999998864 5899998 599999999999999852 1 2233 38899999999999999987
Q ss_pred CC
Q 031123 149 KA 150 (165)
Q Consensus 149 ~~ 150 (165)
+.
T Consensus 112 la 113 (117)
T PF14834_consen 112 LA 113 (117)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 95
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=97.80 E-value=2.7e-05 Score=47.78 Aligned_cols=31 Identities=10% Similarity=-0.074 Sum_probs=26.7
Q ss_pred CCCCCCcHHHHHHHHHHhCCCCceEEeecCC
Q 031123 15 DILGDCPFSQRALLTLEEKKVPYKRHLINIS 45 (165)
Q Consensus 15 ~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~ 45 (165)
+.++.||+|+|+|++|+++|++|+.+.+|+.
T Consensus 4 y~~~~~~~~~~~~~~l~~~gi~~~~~~v~~~ 34 (75)
T cd03044 4 YTYPGNPRSLKILAAAKYNGLDVEIVDFQPG 34 (75)
T ss_pred ecCCCCccHHHHHHHHHHcCCceEEEecccc
Confidence 3455677799999999999999999999875
No 96
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=97.80 E-value=0.00011 Score=50.11 Aligned_cols=67 Identities=19% Similarity=0.293 Sum_probs=46.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccc
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESF 145 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~ 145 (165)
.+..+++...|..||.++.. +...++++|+.|+.++|.|+.+.. .+ +..++ |++.+|+++|.+.-.+
T Consensus 58 ~~~i~~l~~~L~~Le~ll~~---~~~~n~~LS~dDi~lFp~LR~Lti-vk---gi~~P---~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 58 PELIAELNADLEELEPLLAS---PNAVNGELSIDDIILFPILRSLTI-VK---GIQWP---PKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHHHHH-SC---TTBTTSS--HHHHHHHHHHHHHCT-CT---TS------HHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHHhcc---ccccCCCCCHHHHHHHHHHhhhhh-cc---CCcCC---HHHHHHHHHHHHHcCC
Confidence 34567788888999998863 344455999999999999999874 32 45554 9999999999875443
No 97
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=97.80 E-value=3.9e-05 Score=46.88 Aligned_cols=34 Identities=9% Similarity=0.204 Sum_probs=28.9
Q ss_pred eEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecCC
Q 031123 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINIS 45 (165)
Q Consensus 3 ~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~ 45 (165)
++||+++.+.+ |+++|++|.++|++|+.+.+++.
T Consensus 2 ~~Ly~~~~~~~---------~~~v~~~L~~~~i~~e~~~v~~~ 35 (73)
T cd03076 2 YTLTYFPVRGR---------AEAIRLLLADQGISWEEERVTYE 35 (73)
T ss_pred cEEEEeCCcch---------HHHHHHHHHHcCCCCEEEEecHH
Confidence 67888875544 99999999999999999999863
No 98
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=97.79 E-value=4.2e-05 Score=46.31 Aligned_cols=29 Identities=21% Similarity=0.180 Sum_probs=24.7
Q ss_pred CCCcHHHHHHHHHHhCCCCceEEeecCCC
Q 031123 18 GDCPFSQRALLTLEEKKVPYKRHLINISD 46 (165)
Q Consensus 18 ~~cP~~~rvr~~l~~~gi~ye~~~v~~~~ 46 (165)
..||+|+|+|++|+++||+|+.+.+++.+
T Consensus 7 ~~~~~~~~~~~~l~~~gi~~~~~~~~~~~ 35 (73)
T cd03042 7 FRSSASYRVRIALNLKGLDYEYVPVNLLK 35 (73)
T ss_pred CCCcchHHHHHHHHHcCCCCeEEEecCcc
Confidence 34556999999999999999999998753
No 99
>PRK10329 glutaredoxin-like protein; Provisional
Probab=97.72 E-value=4.9e-05 Score=47.60 Aligned_cols=34 Identities=15% Similarity=0.338 Sum_probs=29.2
Q ss_pred CceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 1 ~~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
|.|+||+.+ .||||.+++-.|..+||+|+.+.++
T Consensus 1 ~~v~lYt~~---------~Cp~C~~ak~~L~~~gI~~~~idi~ 34 (81)
T PRK10329 1 MRITIYTRN---------DCVQCHATKRAMESRGFDFEMINVD 34 (81)
T ss_pred CEEEEEeCC---------CCHhHHHHHHHHHHCCCceEEEECC
Confidence 678888654 4777999999999999999999886
No 100
>PRK10638 glutaredoxin 3; Provisional
Probab=97.71 E-value=4e-05 Score=48.07 Aligned_cols=32 Identities=41% Similarity=0.665 Sum_probs=27.3
Q ss_pred eEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 3 ~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
|+||.+ ..||||++++.+|+.+||+|+.+.++
T Consensus 4 v~ly~~---------~~Cp~C~~a~~~L~~~gi~y~~~dv~ 35 (83)
T PRK10638 4 VEIYTK---------ATCPFCHRAKALLNSKGVSFQEIPID 35 (83)
T ss_pred EEEEEC---------CCChhHHHHHHHHHHcCCCcEEEECC
Confidence 677764 44888999999999999999999886
No 101
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=97.65 E-value=0.00028 Score=47.85 Aligned_cols=66 Identities=23% Similarity=0.303 Sum_probs=50.5
Q ss_pred hHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccc
Q 031123 70 GTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESF 145 (165)
Q Consensus 70 ~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~ 145 (165)
+..+++...|..++.++.. +-..++++|+.|+.++|.|+.+.. .+ +..++ |+|.+|+++|.+.-.+
T Consensus 60 ~~i~~l~~~L~~l~~ll~~---~~~~n~~ls~DDi~lFp~LR~Lt~-vk---gi~~P---~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 60 QYIAALNALLEELDPLILS---SEAVNGQLSTDDIILFPILRNLTL-VK---GLVFP---PKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHHHHHcC---ccccCCcCCHHHHHHHHHHhhhhh-hc---CCCCC---HHHHHHHHHHHHHhCC
Confidence 4567788888888888842 233467899999999999999985 33 44554 9999999999876543
No 102
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=97.61 E-value=0.00012 Score=45.49 Aligned_cols=33 Identities=12% Similarity=0.108 Sum_probs=29.5
Q ss_pred eEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecC
Q 031123 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINI 44 (165)
Q Consensus 3 ~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~ 44 (165)
.+||+++.+.+ +++|+++|+++|++||.+.+|.
T Consensus 2 ~~Ly~~~~~~~---------~~~v~~~l~~~gi~~e~~~v~~ 34 (79)
T cd03077 2 PVLHYFNGRGR---------MESIRWLLAAAGVEFEEKFIES 34 (79)
T ss_pred CEEEEeCCCCh---------HHHHHHHHHHcCCCcEEEEecc
Confidence 47899888777 8999999999999999999875
No 103
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=97.56 E-value=0.00012 Score=44.92 Aligned_cols=34 Identities=15% Similarity=0.320 Sum_probs=28.1
Q ss_pred eEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecCCC
Q 031123 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISD 46 (165)
Q Consensus 3 ~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~ 46 (165)
++||..+++ + +++||++|.++||+|+.+.++..+
T Consensus 1 ~~Ly~~~~~-~---------~~~v~~~l~~~~i~~~~~~~~~~~ 34 (77)
T cd03057 1 MKLYYSPGA-C---------SLAPHIALEELGLPFELVRVDLRT 34 (77)
T ss_pred CEEEeCCCC-c---------hHHHHHHHHHcCCCceEEEEeccc
Confidence 478877643 3 689999999999999999998765
No 104
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=97.53 E-value=0.00021 Score=44.75 Aligned_cols=34 Identities=21% Similarity=0.181 Sum_probs=29.5
Q ss_pred EEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecCCC
Q 031123 4 EICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISD 46 (165)
Q Consensus 4 ~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~ 46 (165)
+||++..+.+ |+++|++|+++||+||.+.+++.+
T Consensus 2 ~l~y~~~~~~---------~~~~~~~l~~~gi~~e~~~v~~~~ 35 (82)
T cd03075 2 TLGYWDIRGL---------AQPIRLLLEYTGEKYEEKRYELGD 35 (82)
T ss_pred EEEEeCCccc---------cHHHHHHHHHcCCCcEEEEeccCC
Confidence 5777776666 899999999999999999999765
No 105
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=97.51 E-value=6.7e-05 Score=46.23 Aligned_cols=36 Identities=25% Similarity=0.337 Sum_probs=26.9
Q ss_pred CceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecCCCC
Q 031123 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDK 47 (165)
Q Consensus 1 ~~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~k 47 (165)
|.++||..++ . ++++|++|+++|++|+.+.+|+...
T Consensus 1 ~~l~l~~~~~--~---------~~~~r~~l~~~gv~~e~~~v~~~~~ 36 (76)
T PF02798_consen 1 MTLTLYNGRG--R---------SERIRLLLAEKGVEYEDVRVDFEKG 36 (76)
T ss_dssp EEEEEESSST--T---------THHHHHHHHHTT--EEEEEEETTTT
T ss_pred CEEEEECCCC--c---------hHHHHHHHHHhcccCceEEEecccc
Confidence 4556665555 5 7999999999999999999997554
No 106
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=97.50 E-value=0.00013 Score=44.54 Aligned_cols=32 Identities=31% Similarity=0.386 Sum_probs=26.8
Q ss_pred eEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 3 ~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
|+||+. +.||+|++++.+|+.+||+|+.+.++
T Consensus 3 v~ly~~---------~~C~~C~ka~~~L~~~gi~~~~~di~ 34 (73)
T cd03027 3 VTIYSR---------LGCEDCTAVRLFLREKGLPYVEINID 34 (73)
T ss_pred EEEEec---------CCChhHHHHHHHHHHCCCceEEEECC
Confidence 566665 45788999999999999999998775
No 107
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=97.40 E-value=0.00027 Score=43.11 Aligned_cols=33 Identities=27% Similarity=0.310 Sum_probs=27.4
Q ss_pred eEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecCC
Q 031123 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINIS 45 (165)
Q Consensus 3 ~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~ 45 (165)
++||+.+.+ + ++|||++|+++|++|+.+.+++.
T Consensus 1 ~~l~~~~~~-~---------~~~v~~~l~~~~i~~~~~~~~~~ 33 (76)
T cd03046 1 ITLYHLPRS-R---------SFRILWLLEELGLPYELVLYDRG 33 (76)
T ss_pred CEEEeCCCC-C---------hHHHHHHHHHcCCCcEEEEeCCC
Confidence 478876642 3 79999999999999999999864
No 108
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=97.40 E-value=0.00027 Score=43.82 Aligned_cols=34 Identities=29% Similarity=0.485 Sum_probs=28.2
Q ss_pred CceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 1 ~~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
+.|+||++ ..||||++++.+|..+||+|+.+.++
T Consensus 8 ~~V~ly~~---------~~Cp~C~~ak~~L~~~gi~y~~idi~ 41 (79)
T TIGR02190 8 ESVVVFTK---------PGCPFCAKAKATLKEKGYDFEEIPLG 41 (79)
T ss_pred CCEEEEEC---------CCCHhHHHHHHHHHHcCCCcEEEECC
Confidence 35677766 45788999999999999999998775
No 109
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=97.38 E-value=0.00021 Score=43.45 Aligned_cols=28 Identities=18% Similarity=0.293 Sum_probs=24.5
Q ss_pred CCCCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 16 ILGDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 16 ~~~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
+...||+|++++-+|..+||+|+.+.++
T Consensus 5 ~~~~Cp~C~~ak~~L~~~~i~~~~~di~ 32 (72)
T TIGR02194 5 SKNNCVQCKMTKKALEEHGIAFEEINID 32 (72)
T ss_pred eCCCCHHHHHHHHHHHHCCCceEEEECC
Confidence 4456888999999999999999998876
No 110
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.33 E-value=0.00042 Score=50.39 Aligned_cols=70 Identities=14% Similarity=0.307 Sum_probs=54.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCC---CCCccchHHHHHHHHhhcC
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQW---TVPESLAHVHGYTKKLFAL 142 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~---~~~~~~p~l~~w~~ri~~~ 142 (165)
++..+++..++..|+..|+. .+||.|+++|-.|..+++++..+-. ...+.. .+..+|++|.++..||.++
T Consensus 176 DqVie~vdkc~~aLsa~L~~--q~yf~g~~P~elDAlvFGHlytilT--t~Lpn~ela~~lkkys~LlefcrrIeq~ 248 (257)
T KOG3027|consen 176 DQVIEQVDKCCRALSAQLGS--QPYFTGDQPTELDALVFGHLYTILT--TRLPNMELANILKKYSNLLEFCRRIEQQ 248 (257)
T ss_pred HHHHHHHHHHHHHHHHHhcC--CCccCCCCccHHHHHHHhhhHHhhh--hcCCcHHHHHHHHHhHHHHHHHHHHHHH
Confidence 67788899999999999974 7999999999999999998776532 111111 1248899999999998763
No 111
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=97.30 E-value=0.00029 Score=42.75 Aligned_cols=26 Identities=31% Similarity=0.635 Sum_probs=23.5
Q ss_pred CCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 18 GDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 18 ~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
..||||.+++-+|...|++|+.+.++
T Consensus 9 ~~Cp~C~~ak~~L~~~~i~~~~~~v~ 34 (72)
T cd03029 9 PGCPFCARAKAALQENGISYEEIPLG 34 (72)
T ss_pred CCCHHHHHHHHHHHHcCCCcEEEECC
Confidence 45888999999999999999998876
No 112
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=97.25 E-value=0.00024 Score=41.54 Aligned_cols=28 Identities=29% Similarity=0.587 Sum_probs=25.0
Q ss_pred CCCCcHHHHHHHHHHhCCCCceEEeecC
Q 031123 17 LGDCPFSQRALLTLEEKKVPYKRHLINI 44 (165)
Q Consensus 17 ~~~cP~~~rvr~~l~~~gi~ye~~~v~~ 44 (165)
...||+|.+++-+|+.+|++|+.+.++-
T Consensus 6 ~~~C~~C~~~~~~L~~~~i~y~~~dv~~ 33 (60)
T PF00462_consen 6 KPGCPYCKKAKEFLDEKGIPYEEVDVDE 33 (60)
T ss_dssp STTSHHHHHHHHHHHHTTBEEEEEEGGG
T ss_pred cCCCcCHHHHHHHHHHcCCeeeEccccc
Confidence 4569999999999999999999998863
No 113
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=97.24 E-value=0.00037 Score=42.45 Aligned_cols=27 Identities=30% Similarity=0.556 Sum_probs=24.1
Q ss_pred CCCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 17 LGDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 17 ~~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
...||||.+++-+|+.+||+|+.+.++
T Consensus 7 ~~~Cp~C~~ak~~L~~~~i~~~~i~i~ 33 (75)
T cd03418 7 KPNCPYCVRAKALLDKKGVDYEEIDVD 33 (75)
T ss_pred CCCChHHHHHHHHHHHCCCcEEEEECC
Confidence 345899999999999999999998886
No 114
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=97.19 E-value=0.00045 Score=42.62 Aligned_cols=28 Identities=25% Similarity=0.432 Sum_probs=25.0
Q ss_pred CCCCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 16 ILGDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 16 ~~~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
+.+.||+|.+++-+|+.+||+|+.+.++
T Consensus 5 ~~~~Cp~C~~a~~~L~~~~i~~~~~di~ 32 (79)
T TIGR02181 5 TKPYCPYCTRAKALLSSKGVTFTEIRVD 32 (79)
T ss_pred ecCCChhHHHHHHHHHHcCCCcEEEEec
Confidence 4566889999999999999999999886
No 115
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=97.18 E-value=0.00052 Score=44.40 Aligned_cols=28 Identities=29% Similarity=0.421 Sum_probs=25.0
Q ss_pred CCCCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 16 ILGDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 16 ~~~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
.++.||||.+++-+|..+||+|+.+.++
T Consensus 23 ~~~~Cp~C~~ak~lL~~~~i~~~~~di~ 50 (97)
T TIGR00365 23 QFPQCGFSARAVQILKACGVPFAYVNVL 50 (97)
T ss_pred CCCCCchHHHHHHHHHHcCCCEEEEECC
Confidence 5688999999999999999999987664
No 116
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=97.17 E-value=0.00046 Score=44.81 Aligned_cols=26 Identities=19% Similarity=0.117 Sum_probs=24.2
Q ss_pred CCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 18 GDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 18 ~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
..||||.+++-+|...|++|+.+.||
T Consensus 16 ~~Cp~C~~ak~~L~~~~i~~~~vdid 41 (99)
T TIGR02189 16 SSCCMCHVVKRLLLTLGVNPAVHEID 41 (99)
T ss_pred CCCHHHHHHHHHHHHcCCCCEEEEcC
Confidence 56999999999999999999998887
No 117
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=97.07 E-value=0.0015 Score=40.01 Aligned_cols=38 Identities=18% Similarity=0.013 Sum_probs=33.4
Q ss_pred eEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEee
Q 031123 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLI 42 (165)
Q Consensus 3 ~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v 42 (165)
++||+.++..+ ..-.||||-++...|++.|++|+.+..
T Consensus 1 ~~L~~~~~~~g--~ps~sp~clk~~~~Lr~~~~~~~v~~~ 38 (73)
T cd03078 1 MELHVWGGDWG--LPSVDPECLAVLAYLKFAGAPLKVVPS 38 (73)
T ss_pred CEEEEECCCCC--CCcCCHHHHHHHHHHHcCCCCEEEEec
Confidence 57999998887 677889999999999999999988854
No 118
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=97.07 E-value=0.00081 Score=45.05 Aligned_cols=33 Identities=24% Similarity=0.261 Sum_probs=31.1
Q ss_pred CceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEee
Q 031123 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLI 42 (165)
Q Consensus 1 ~~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v 42 (165)
|||+||..|.|.. |++++-.|+..||+|+.+.+
T Consensus 1 ~~itiy~~p~C~t---------~rka~~~L~~~gi~~~~~~y 33 (117)
T COG1393 1 MMITIYGNPNCST---------CRKALAWLEEHGIEYTFIDY 33 (117)
T ss_pred CeEEEEeCCCChH---------HHHHHHHHHHcCCCcEEEEe
Confidence 7999999999999 99999999999999998866
No 119
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=96.96 E-value=0.001 Score=39.75 Aligned_cols=29 Identities=21% Similarity=0.525 Sum_probs=24.5
Q ss_pred CCCCCcHHHHHHHHHHhCCCCceEEeecC
Q 031123 16 ILGDCPFSQRALLTLEEKKVPYKRHLINI 44 (165)
Q Consensus 16 ~~~~cP~~~rvr~~l~~~gi~ye~~~v~~ 44 (165)
+..+||+|++++.+|.++|++|..+.++.
T Consensus 6 ~~~~c~~c~~~~~~l~~~~i~~~~~~i~~ 34 (73)
T cd02976 6 TKPDCPYCKATKRFLDERGIPFEEVDVDE 34 (73)
T ss_pred eCCCChhHHHHHHHHHHCCCCeEEEeCCC
Confidence 34568889999999999999999888764
No 120
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.96 E-value=0.0092 Score=46.07 Aligned_cols=70 Identities=19% Similarity=0.207 Sum_probs=51.3
Q ss_pred hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCC---CccchHHHHHHHHhhcC
Q 031123 69 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTV---PESLAHVHGYTKKLFAL 142 (165)
Q Consensus 69 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~---~~~~p~l~~w~~ri~~~ 142 (165)
++......++++.|+++|+. ++|++|+++|--|..++..+..+.. .+ .+.-.+ ...++||.++.+++.+.
T Consensus 162 ~~i~~~Aska~~~LS~~Lgs--~kffFgd~psslDa~lfs~la~~~~-~~-Lp~~~Lq~~l~~~~NL~~~~~~i~s~ 234 (313)
T KOG3028|consen 162 DQIYKDASKALNLLSTLLGS--KKFFFGDKPSSLDALLFSYLAILLQ-VA-LPNDSLQVHLLAHKNLVRYVERIRSL 234 (313)
T ss_pred HHHHHHHHHHHHHHHHHhcC--ceEeeCCCCchHHHHHHHHHHHHHh-cc-CCchhHHHHHHhcchHHHHHHHHHHH
Confidence 44555667899999999974 7999999999999999998888432 11 111111 13489999999998863
No 121
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=96.92 E-value=0.0021 Score=40.86 Aligned_cols=28 Identities=21% Similarity=0.268 Sum_probs=25.1
Q ss_pred CCCCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 16 ILGDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 16 ~~~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
+.+.||||.+++-+|..+|++|+.+.++
T Consensus 19 ~~~~Cp~C~~ak~~L~~~~i~y~~idv~ 46 (90)
T cd03028 19 EEPRCGFSRKVVQILNQLGVDFGTFDIL 46 (90)
T ss_pred CCCCCcHHHHHHHHHHHcCCCeEEEEcC
Confidence 4467999999999999999999999875
No 122
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=96.92 E-value=0.0011 Score=39.38 Aligned_cols=26 Identities=27% Similarity=0.468 Sum_probs=22.6
Q ss_pred CCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 18 GDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 18 ~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
..||+|++++.+|..+|++|+.+.++
T Consensus 8 ~~Cp~C~~~~~~L~~~~i~~~~~di~ 33 (72)
T cd02066 8 STCPYCKRAKRLLESLGIEFEEIDIL 33 (72)
T ss_pred CCCHHHHHHHHHHHHcCCcEEEEECC
Confidence 44889999999999999999877664
No 123
>PRK10824 glutaredoxin-4; Provisional
Probab=96.83 E-value=0.0028 Score=42.30 Aligned_cols=33 Identities=21% Similarity=0.165 Sum_probs=27.5
Q ss_pred ecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 9 AAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 9 ~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
-.+.+ ..+.||||.++.-+|..+|++|+.+.++
T Consensus 21 ~Kg~~--~~p~Cpyc~~ak~lL~~~~i~~~~idi~ 53 (115)
T PRK10824 21 MKGSP--KLPSCGFSAQAVQALSACGERFAYVDIL 53 (115)
T ss_pred ECCCC--CCCCCchHHHHHHHHHHcCCCceEEEec
Confidence 33444 6789999999999999999999988764
No 124
>PHA03050 glutaredoxin; Provisional
Probab=96.71 E-value=0.0019 Score=42.64 Aligned_cols=28 Identities=29% Similarity=0.409 Sum_probs=24.2
Q ss_pred CCCCCcHHHHHHHHHHhCCC---CceEEeec
Q 031123 16 ILGDCPFSQRALLTLEEKKV---PYKRHLIN 43 (165)
Q Consensus 16 ~~~~cP~~~rvr~~l~~~gi---~ye~~~v~ 43 (165)
+-..||||.+++-+|..+|| +|+.+.++
T Consensus 19 s~~~CPyC~~ak~~L~~~~i~~~~~~~i~i~ 49 (108)
T PHA03050 19 VKFTCPFCRNALDILNKFSFKRGAYEIVDIK 49 (108)
T ss_pred ECCCChHHHHHHHHHHHcCCCcCCcEEEECC
Confidence 44569999999999999999 78888886
No 125
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=96.63 E-value=0.0024 Score=38.76 Aligned_cols=27 Identities=19% Similarity=0.275 Sum_probs=22.9
Q ss_pred CCCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 17 LGDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 17 ~~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
..+||+|++++..|..+|++|+.+.++
T Consensus 7 ~~~C~~C~~~~~~L~~~~~~~~~idi~ 33 (77)
T TIGR02200 7 TTWCGYCAQLMRTLDKLGAAYEWVDIE 33 (77)
T ss_pred CCCChhHHHHHHHHHHcCCceEEEeCc
Confidence 456777999999999999999877664
No 126
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=96.50 E-value=0.0035 Score=42.84 Aligned_cols=32 Identities=25% Similarity=0.445 Sum_probs=26.9
Q ss_pred eEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 3 ~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
|++|+.++ ||+|++++-+|..+||+|+.+.+.
T Consensus 2 i~iY~~~~---------C~~C~ka~~~L~~~gi~~~~idi~ 33 (131)
T PRK01655 2 VTLFTSPS---------CTSCRKAKAWLEEHDIPFTERNIF 33 (131)
T ss_pred EEEEeCCC---------ChHHHHHHHHHHHcCCCcEEeecc
Confidence 78886654 666999999999999999998773
No 127
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=96.48 E-value=0.0047 Score=38.67 Aligned_cols=34 Identities=29% Similarity=0.418 Sum_probs=29.0
Q ss_pred CceEEEEEecCCCCCCCCCCcHHHHHHHHHHh-----CCCCceEEeec
Q 031123 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEE-----KKVPYKRHLIN 43 (165)
Q Consensus 1 ~~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~-----~gi~ye~~~v~ 43 (165)
|.|++|+.++ ||||.+++-+|.. .|++|+.+.++
T Consensus 1 m~v~iy~~~~---------C~~C~~a~~~L~~l~~~~~~i~~~~idi~ 39 (85)
T PRK11200 1 MFVVIFGRPG---------CPYCVRAKELAEKLSEERDDFDYRYVDIH 39 (85)
T ss_pred CEEEEEeCCC---------ChhHHHHHHHHHhhcccccCCcEEEEECC
Confidence 7788887764 7779999999999 89999988876
No 128
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=96.43 E-value=0.0042 Score=41.36 Aligned_cols=32 Identities=19% Similarity=0.492 Sum_probs=26.7
Q ss_pred ceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEee
Q 031123 2 AVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLI 42 (165)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v 42 (165)
||++|+.++ ||+|++++-.|..+||+|+.+.+
T Consensus 1 mi~iY~~~~---------C~~c~ka~~~L~~~gi~~~~idi 32 (115)
T cd03032 1 MIKLYTSPS---------CSSCRKAKQWLEEHQIPFEERNL 32 (115)
T ss_pred CEEEEeCCC---------CHHHHHHHHHHHHCCCceEEEec
Confidence 378886655 55599999999999999998877
No 129
>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.
Probab=96.41 E-value=0.0033 Score=41.61 Aligned_cols=28 Identities=25% Similarity=0.243 Sum_probs=23.9
Q ss_pred CCCCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 16 ILGDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 16 ~~~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
+.+.||+|++++-+|+.+||+|+.+.+.
T Consensus 5 ~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (111)
T cd03036 5 EYPKCSTCRKAKKWLDEHGVDYTAIDIV 32 (111)
T ss_pred ECCCCHHHHHHHHHHHHcCCceEEeccc
Confidence 3455788999999999999999998774
No 130
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=96.39 E-value=0.0054 Score=36.54 Aligned_cols=27 Identities=19% Similarity=0.263 Sum_probs=22.5
Q ss_pred CCCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 17 LGDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 17 ~~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
..+||+|++++..|+.+|++|+.+.++
T Consensus 7 ~~~C~~C~~~~~~l~~~~i~~~~vdi~ 33 (74)
T TIGR02196 7 TPWCPPCKKAKEYLTSKGIAFEEIDVE 33 (74)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEecc
Confidence 345777999999999999999887665
No 131
>PRK10026 arsenate reductase; Provisional
Probab=96.35 E-value=0.0052 Score=42.51 Aligned_cols=32 Identities=16% Similarity=0.132 Sum_probs=29.9
Q ss_pred ceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEee
Q 031123 2 AVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLI 42 (165)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v 42 (165)
+|++|+.|+|.. |++++-+|...|++|+.+.+
T Consensus 3 ~i~iY~~p~Cst---------~RKA~~wL~~~gi~~~~~d~ 34 (141)
T PRK10026 3 NITIYHNPACGT---------SRNTLEMIRNSGTEPTIIHY 34 (141)
T ss_pred EEEEEeCCCCHH---------HHHHHHHHHHCCCCcEEEee
Confidence 699999999999 99999999999999998876
No 132
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=96.33 E-value=0.0057 Score=37.65 Aligned_cols=30 Identities=23% Similarity=0.297 Sum_probs=25.9
Q ss_pred CCCCcHHHHHHHHHHhCCCCceEEeecCCC
Q 031123 17 LGDCPFSQRALLTLEEKKVPYKRHLINISD 46 (165)
Q Consensus 17 ~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~ 46 (165)
...||+|.+++-+|...+++|+.+.++..+
T Consensus 7 ~~~Cp~C~~~~~~l~~~~~~~~~~~v~~~~ 36 (82)
T cd03419 7 KSYCPYCKRAKSLLKELGVKPAVVELDQHE 36 (82)
T ss_pred cCCCHHHHHHHHHHHHcCCCcEEEEEeCCC
Confidence 356999999999999999999999887543
No 133
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=96.27 E-value=0.0052 Score=40.11 Aligned_cols=28 Identities=29% Similarity=0.241 Sum_probs=23.6
Q ss_pred CCCCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 16 ILGDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 16 ~~~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
+.+.||+|++++-.|..+||+|+.+.+.
T Consensus 5 ~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (105)
T cd02977 5 GNPNCSTSRKALAWLEEHGIEYEFIDYL 32 (105)
T ss_pred ECCCCHHHHHHHHHHHHcCCCcEEEeec
Confidence 3445777999999999999999988874
No 134
>PRK12559 transcriptional regulator Spx; Provisional
Probab=96.21 E-value=0.0064 Score=41.54 Aligned_cols=33 Identities=24% Similarity=0.323 Sum_probs=27.5
Q ss_pred ceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 2 AVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
||++|+.++|.. |+++.-+|..+||+|+.+.+.
T Consensus 1 mi~iY~~~~C~~---------crkA~~~L~~~gi~~~~~di~ 33 (131)
T PRK12559 1 MVVLYTTASCAS---------CRKAKAWLEENQIDYTEKNIV 33 (131)
T ss_pred CEEEEeCCCChH---------HHHHHHHHHHcCCCeEEEEee
Confidence 478887766555 999999999999999998774
No 135
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=96.04 E-value=0.0081 Score=41.09 Aligned_cols=33 Identities=18% Similarity=0.383 Sum_probs=27.2
Q ss_pred ceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 2 AVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
||++|+.+. ||.|++++-.|...||+|+.+.+.
T Consensus 1 Mi~iY~~~~---------C~~crkA~~~L~~~~i~~~~~d~~ 33 (132)
T PRK13344 1 MIKIYTISS---------CTSCKKAKTWLNAHQLSYKEQNLG 33 (132)
T ss_pred CEEEEeCCC---------CHHHHHHHHHHHHcCCCeEEEECC
Confidence 388886554 555999999999999999999874
No 136
>PRK10853 putative reductase; Provisional
Probab=96.03 E-value=0.0077 Score=40.40 Aligned_cols=32 Identities=19% Similarity=0.162 Sum_probs=29.2
Q ss_pred ceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEee
Q 031123 2 AVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLI 42 (165)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v 42 (165)
||++|+.+.|.. |++++-+|+..|++|+.+.+
T Consensus 1 Mi~iy~~~~C~t---------~rkA~~~L~~~~i~~~~~d~ 32 (118)
T PRK10853 1 MVTLYGIKNCDT---------IKKARRWLEAQGIDYRFHDY 32 (118)
T ss_pred CEEEEcCCCCHH---------HHHHHHHHHHcCCCcEEeeh
Confidence 389999999998 99999999999999998865
No 137
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=95.95 E-value=0.01 Score=39.52 Aligned_cols=32 Identities=13% Similarity=0.050 Sum_probs=27.6
Q ss_pred ceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEee
Q 031123 2 AVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLI 42 (165)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v 42 (165)
.|+||+.|.|.. |++++-+|+..|++|+.+.+
T Consensus 1 ~i~iy~~p~C~~---------crkA~~~L~~~gi~~~~~d~ 32 (113)
T cd03033 1 DIIFYEKPGCAN---------NARQKALLEAAGHEVEVRDL 32 (113)
T ss_pred CEEEEECCCCHH---------HHHHHHHHHHcCCCcEEeeh
Confidence 477888777766 99999999999999998876
No 138
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=95.82 E-value=0.013 Score=36.13 Aligned_cols=30 Identities=20% Similarity=0.324 Sum_probs=25.6
Q ss_pred CCCCCcHHHHHHHHHHhCCCC--ceEEeecCC
Q 031123 16 ILGDCPFSQRALLTLEEKKVP--YKRHLINIS 45 (165)
Q Consensus 16 ~~~~cP~~~rvr~~l~~~gi~--ye~~~v~~~ 45 (165)
...+||||++++-+|...+++ |+.+.++..
T Consensus 5 ~~~~Cp~C~~~~~~L~~~~i~~~~~~~~v~~~ 36 (84)
T TIGR02180 5 SKSYCPYCKKAKEILAKLNVKPAYEVVELDQL 36 (84)
T ss_pred ECCCChhHHHHHHHHHHcCCCCCCEEEEeeCC
Confidence 346799999999999999999 888888743
No 139
>TIGR01616 nitro_assoc nitrogenase-associated protein. This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.
Probab=95.61 E-value=0.017 Score=39.15 Aligned_cols=32 Identities=13% Similarity=0.076 Sum_probs=29.3
Q ss_pred ceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEee
Q 031123 2 AVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLI 42 (165)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v 42 (165)
.|+||+.|.|.. |++++-+|..+||+|+.+.+
T Consensus 2 ~i~iY~~p~Cst---------~RKA~~~L~~~gi~~~~~d~ 33 (126)
T TIGR01616 2 TIIFYEKPGCAN---------NARQKAALKASGHDVEVQDI 33 (126)
T ss_pred eEEEEeCCCCHH---------HHHHHHHHHHCCCCcEEEec
Confidence 588999998888 99999999999999999876
No 140
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=95.60 E-value=0.014 Score=38.26 Aligned_cols=32 Identities=19% Similarity=0.178 Sum_probs=25.4
Q ss_pred eEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 3 ~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
|++|+.++|.. |++++-.|...||+|+.+.+.
T Consensus 1 i~iy~~~~C~~---------crka~~~L~~~~i~~~~~di~ 32 (105)
T cd03035 1 ITLYGIKNCDT---------VKKARKWLEARGVAYTFHDYR 32 (105)
T ss_pred CEEEeCCCCHH---------HHHHHHHHHHcCCCeEEEecc
Confidence 45666555554 999999999999999988773
No 141
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=95.57 E-value=0.015 Score=36.57 Aligned_cols=27 Identities=22% Similarity=0.333 Sum_probs=20.3
Q ss_pred CCCCcHHHHHHHHHHhCC-----CCceEEeec
Q 031123 17 LGDCPFSQRALLTLEEKK-----VPYKRHLIN 43 (165)
Q Consensus 17 ~~~cP~~~rvr~~l~~~g-----i~ye~~~v~ 43 (165)
...||||.+++-+|..++ ++|+.+.++
T Consensus 7 ~~~Cp~C~~ak~~L~~~~~~~~~i~~~~idi~ 38 (86)
T TIGR02183 7 RPGCPYCVRAKQLAEKLAIERADFEFRYIDIH 38 (86)
T ss_pred CCCCccHHHHHHHHHHhCcccCCCcEEEEECC
Confidence 346888999999999885 456665554
No 142
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=95.52 E-value=0.017 Score=35.40 Aligned_cols=28 Identities=14% Similarity=0.073 Sum_probs=24.3
Q ss_pred CCCCCCcHHHHHHHHHHhCCCCceEEee
Q 031123 15 DILGDCPFSQRALLTLEEKKVPYKRHLI 42 (165)
Q Consensus 15 ~~~~~cP~~~rvr~~l~~~gi~ye~~~v 42 (165)
-.++.+|+|.|++++|++.|++||.+..
T Consensus 12 ~~~~~~~~~~kv~~~L~elglpye~~~~ 39 (74)
T cd03079 12 ILLPDNASCLAVQTFLKMCNLPFNVRCR 39 (74)
T ss_pred eecCCCCCHHHHHHHHHHcCCCcEEEec
Confidence 3567789999999999999999999843
No 143
>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family. This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.
Probab=95.36 E-value=0.019 Score=38.26 Aligned_cols=28 Identities=21% Similarity=0.197 Sum_probs=23.2
Q ss_pred CCCCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 16 ILGDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 16 ~~~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
+.+.||+|++++-+|+.+||+|+.+.+.
T Consensus 5 ~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (117)
T TIGR01617 5 GSPNCTTCKKARRWLEANGIEYQFIDIG 32 (117)
T ss_pred eCCCCHHHHHHHHHHHHcCCceEEEecC
Confidence 3445777999999999999999888763
No 144
>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional
Probab=95.01 E-value=0.024 Score=46.11 Aligned_cols=32 Identities=25% Similarity=0.558 Sum_probs=27.4
Q ss_pred eEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 3 ~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
|++|+.+ .||||.++.-+|..+||+|+.+.|+
T Consensus 4 V~vys~~---------~Cp~C~~aK~~L~~~gi~~~~idi~ 35 (410)
T PRK12759 4 VRIYTKT---------NCPFCDLAKSWFGANDIPFTQISLD 35 (410)
T ss_pred EEEEeCC---------CCHHHHHHHHHHHHCCCCeEEEECC
Confidence 6676654 4788999999999999999999887
No 145
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=94.89 E-value=0.034 Score=36.96 Aligned_cols=31 Identities=23% Similarity=0.192 Sum_probs=27.7
Q ss_pred eEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEee
Q 031123 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLI 42 (165)
Q Consensus 3 ~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v 42 (165)
|+||+.++|.. |+|++-.|...|++|+.+.+
T Consensus 1 i~iy~~~~C~t---------~rkA~~~L~~~~i~~~~~di 31 (114)
T TIGR00014 1 VTIYHNPRCSK---------SRNTLALLEDKGIEPEVVKY 31 (114)
T ss_pred CEEEECCCCHH---------HHHHHHHHHHCCCCeEEEec
Confidence 57888888888 99999999999999998765
No 146
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=94.88 E-value=0.02 Score=47.50 Aligned_cols=61 Identities=15% Similarity=0.235 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHH
Q 031123 73 QALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKK 138 (165)
Q Consensus 73 ~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r 138 (165)
..+...++.++..|.- ..|++|.++|+||++++..+..-.. .... ...-..+.++.+|++-
T Consensus 91 ~~~s~~~~~ld~~l~~--~t~lvg~sls~Ad~aiw~~l~~n~~-~~~~--lk~~k~~~~v~Rw~~~ 151 (712)
T KOG1147|consen 91 DEISSSLSELDKFLVL--RTFLVGNSLSIADFAIWGALHSNGM-RQEQ--LKAKKDYQNVERWYDL 151 (712)
T ss_pred HHHHHHHHHHHhhhhH--HHHhhccchhHHHHHHHHHHhcccc-hHHH--HHhhCCchhhhhhcCc
Confidence 3466677888888864 6899999999999999998876311 1000 1112467889999983
No 147
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=94.71 E-value=0.039 Score=36.54 Aligned_cols=31 Identities=23% Similarity=0.168 Sum_probs=27.6
Q ss_pred eEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEee
Q 031123 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLI 42 (165)
Q Consensus 3 ~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v 42 (165)
|+||+.++|.. |++++-.|+..|++|+.+.+
T Consensus 1 i~iy~~~~C~t---------~rkA~~~L~~~~i~~~~~di 31 (112)
T cd03034 1 ITIYHNPRCSK---------SRNALALLEEAGIEPEIVEY 31 (112)
T ss_pred CEEEECCCCHH---------HHHHHHHHHHCCCCeEEEec
Confidence 57898888888 99999999999999998765
No 148
>PTZ00062 glutaredoxin; Provisional
Probab=94.20 E-value=0.098 Score=38.49 Aligned_cols=28 Identities=25% Similarity=0.298 Sum_probs=24.2
Q ss_pred CCCCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 16 ILGDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 16 ~~~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
.-+.||||+++.-+|+.+||+|+.+.|+
T Consensus 124 ~~p~C~~C~~~k~~L~~~~i~y~~~DI~ 151 (204)
T PTZ00062 124 TFPFCRFSNAVVNMLNSSGVKYETYNIF 151 (204)
T ss_pred CCCCChhHHHHHHHHHHcCCCEEEEEcC
Confidence 3457999999999999999999887664
No 149
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=93.71 E-value=0.088 Score=36.68 Aligned_cols=39 Identities=10% Similarity=0.118 Sum_probs=29.5
Q ss_pred eEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecC
Q 031123 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINI 44 (165)
Q Consensus 3 ~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~ 44 (165)
|.||.-.- .+ .-..||+|++|+-+|+.+||+|+++.|++
T Consensus 2 VvlYttsl-~g--iR~t~~~C~~ak~iL~~~~V~~~e~DVs~ 40 (147)
T cd03031 2 VVLYTTSL-RG--VRKTFEDCNNVRAILESFRVKFDERDVSM 40 (147)
T ss_pred EEEEEcCC-cC--CCCcChhHHHHHHHHHHCCCcEEEEECCC
Confidence 55665431 11 34578999999999999999999988864
No 150
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=91.66 E-value=0.26 Score=32.24 Aligned_cols=27 Identities=26% Similarity=0.361 Sum_probs=24.7
Q ss_pred CCCcHHHHHHHHHHhCCCCceEEeecC
Q 031123 18 GDCPFSQRALLTLEEKKVPYKRHLINI 44 (165)
Q Consensus 18 ~~cP~~~rvr~~l~~~gi~ye~~~v~~ 44 (165)
..||||+++.-+|...|+++..+++|-
T Consensus 22 s~C~~c~~~k~ll~~~~v~~~vvELD~ 48 (104)
T KOG1752|consen 22 SSCPYCHRAKELLSDLGVNPKVVELDE 48 (104)
T ss_pred CcCchHHHHHHHHHhCCCCCEEEEccC
Confidence 579999999999999999999999873
No 151
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=91.06 E-value=1.2 Score=31.67 Aligned_cols=40 Identities=23% Similarity=0.237 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHhhC-CCCcccCCC-CChhhHHHHhHHHHHH
Q 031123 75 LLEELKALDEHLKTH-GGPFIAGEK-VTAVDLSLAPKLYHLQ 114 (165)
Q Consensus 75 ~~~~l~~le~~L~~~-~~~~l~G~~-~T~AD~~l~~~l~~~~ 114 (165)
-.+.+..|++.|+.. ..+|+.|+. +|-.||.+++.+..+.
T Consensus 113 a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~l 154 (168)
T PF11801_consen 113 AMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALLL 154 (168)
T ss_pred HHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHh
Confidence 467889999999641 127888877 9999999999888764
No 152
>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri
Probab=87.51 E-value=0.41 Score=28.00 Aligned_cols=15 Identities=20% Similarity=0.556 Sum_probs=11.8
Q ss_pred CCcHHHHHHHHHHhC
Q 031123 19 DCPFSQRALLTLEEK 33 (165)
Q Consensus 19 ~cP~~~rvr~~l~~~ 33 (165)
+||+|.++.-.|+..
T Consensus 10 ~C~~C~~~~~~l~~l 24 (67)
T cd02973 10 TCPYCPDAVQAANRI 24 (67)
T ss_pred CCCCcHHHHHHHHHH
Confidence 577799998888765
No 153
>COG5515 Uncharacterized conserved small protein [Function unknown]
Probab=86.63 E-value=0.94 Score=26.43 Aligned_cols=27 Identities=19% Similarity=0.258 Sum_probs=23.0
Q ss_pred CceEEEEEecCCCCCCCCCCcHHHHHHHHHHh
Q 031123 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEE 32 (165)
Q Consensus 1 ~~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~ 32 (165)
|.++||-+-..+. .+.||+||-.+|+.
T Consensus 1 ~~mKLYRfiTGpD-----DssFChrvta~LN~ 27 (70)
T COG5515 1 MKMKLYRFITGPD-----DSSFCHRVTAALNK 27 (70)
T ss_pred CcceeeEeecCCc-----hHHHHHHHHHHHhC
Confidence 7789999988777 58899999999874
No 154
>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised. SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.
Probab=85.36 E-value=0.78 Score=29.74 Aligned_cols=41 Identities=27% Similarity=0.437 Sum_probs=25.8
Q ss_pred CceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecC
Q 031123 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINI 44 (165)
Q Consensus 1 ~~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~ 44 (165)
|-|++|+--.+.+ ...---.++|..+|.-++|+|+.+.|..
T Consensus 1 m~I~vy~ss~sg~---~~ikk~q~~v~~iL~a~kI~fe~vDIa~ 41 (99)
T PF04908_consen 1 MVIKVYISSISGS---REIKKRQQRVLMILEAKKIPFEEVDIAM 41 (99)
T ss_dssp -SEEEEE-SS-SS---HHHHHHHHHHHHHHHHTT--EEEEETTT
T ss_pred CEEEEEEecccCC---HHHHHHHHHHHHHHHHcCCCcEEEeCcC
Confidence 7788888433333 3333346899999999999999887754
No 155
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=85.01 E-value=1.3 Score=28.21 Aligned_cols=22 Identities=32% Similarity=0.387 Sum_probs=19.8
Q ss_pred HHHHHHHHHhCCCCceEEeecC
Q 031123 23 SQRALLTLEEKKVPYKRHLINI 44 (165)
Q Consensus 23 ~~rvr~~l~~~gi~ye~~~v~~ 44 (165)
|++|..+|.-+||+|+.+.|+.
T Consensus 19 ~~~v~~lL~~k~I~f~eiDI~~ 40 (92)
T cd03030 19 QQEVLGFLEAKKIEFEEVDISM 40 (92)
T ss_pred HHHHHHHHHHCCCceEEEecCC
Confidence 6889999999999999998874
No 156
>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2. This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.
Probab=84.53 E-value=2.3 Score=25.72 Aligned_cols=25 Identities=16% Similarity=0.173 Sum_probs=19.4
Q ss_pred CCcHHHHH----HHHHHhCCCCceEEeec
Q 031123 19 DCPFSQRA----LLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 19 ~cP~~~rv----r~~l~~~gi~ye~~~v~ 43 (165)
+||+|..+ .-++.+.|++++.+.+|
T Consensus 9 ~C~~C~~~~~~~~~~~~e~~~~~~~~~v~ 37 (76)
T TIGR00412 9 GCANCQMTEKNVKKAVEELGIDAEFEKVT 37 (76)
T ss_pred CCcCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 46668887 55677889999998887
No 157
>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=81.80 E-value=3.6 Score=26.69 Aligned_cols=27 Identities=22% Similarity=0.298 Sum_probs=22.0
Q ss_pred CCCCCcHHHHHHHHHHhCC-CCceEEee
Q 031123 16 ILGDCPFSQRALLTLEEKK-VPYKRHLI 42 (165)
Q Consensus 16 ~~~~cP~~~rvr~~l~~~g-i~ye~~~v 42 (165)
.++-|-||.++.=+|...| ++|..+.|
T Consensus 26 ~~P~CGFS~~~vqiL~~~g~v~~~~vnV 53 (105)
T COG0278 26 EFPQCGFSAQAVQILSACGVVDFAYVDV 53 (105)
T ss_pred CCCCCCccHHHHHHHHHcCCcceeEEee
Confidence 5899999999999999999 55554443
No 158
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=80.28 E-value=1.7 Score=28.37 Aligned_cols=27 Identities=26% Similarity=0.252 Sum_probs=19.2
Q ss_pred CCCCCcHHHHHHHHHHhCCCCceEEee
Q 031123 16 ILGDCPFSQRALLTLEEKKVPYKRHLI 42 (165)
Q Consensus 16 ~~~~cP~~~rvr~~l~~~gi~ye~~~v 42 (165)
+.+-|.=|++++-.|+..||+|+.+.+
T Consensus 2 ~~~~C~t~rka~~~L~~~gi~~~~~d~ 28 (110)
T PF03960_consen 2 GNPNCSTCRKALKWLEENGIEYEFIDY 28 (110)
T ss_dssp E-TT-HHHHHHHHHHHHTT--EEEEET
T ss_pred cCCCCHHHHHHHHHHHHcCCCeEeehh
Confidence 344566699999999999999988765
No 159
>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.
Probab=77.47 E-value=2.6 Score=25.87 Aligned_cols=39 Identities=21% Similarity=0.417 Sum_probs=27.5
Q ss_pred ceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCC--CCceEEeecCCCCCC
Q 031123 2 AVEICVKAAVGAPDILGDCPFSQRALLTLEEKK--VPYKRHLINISDKPQ 49 (165)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~g--i~ye~~~v~~~~kp~ 49 (165)
.|+||++++| +.|..+.-+|.... .+++...||+.+.++
T Consensus 1 ~l~l~~k~~C---------~LC~~a~~~L~~~~~~~~~~l~~vDI~~d~~ 41 (81)
T PF05768_consen 1 TLTLYTKPGC---------HLCDEAKEILEEVAAEFPFELEEVDIDEDPE 41 (81)
T ss_dssp -EEEEE-SSS---------HHHHHHHHHHHHCCTTSTCEEEEEETTTTHH
T ss_pred CEEEEcCCCC---------ChHHHHHHHHHHHHhhcCceEEEEECCCCHH
Confidence 3678888765 55999999998654 467788888776554
No 160
>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.
Probab=68.36 E-value=6.2 Score=21.20 Aligned_cols=27 Identities=26% Similarity=0.364 Sum_probs=18.6
Q ss_pred CCCCcHHHHHHHHHH-----hCCCCceEEeec
Q 031123 17 LGDCPFSQRALLTLE-----EKKVPYKRHLIN 43 (165)
Q Consensus 17 ~~~cP~~~rvr~~l~-----~~gi~ye~~~v~ 43 (165)
...||+|++++..+. ..++.+..+.++
T Consensus 6 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~ 37 (69)
T cd01659 6 APWCPFCQALRPVLAELALLNKGVKFEAVDVD 37 (69)
T ss_pred CCCChhHHhhhhHHHHHHhhCCCcEEEEEEcC
Confidence 346899999999998 445555544443
No 161
>PHA02125 thioredoxin-like protein
Probab=64.18 E-value=4.5 Score=24.27 Aligned_cols=31 Identities=13% Similarity=0.120 Sum_probs=20.9
Q ss_pred CCCCcHHHHHHHHHHhCCCCceEEeecCCCCCC
Q 031123 17 LGDCPFSQRALLTLEEKKVPYKRHLINISDKPQ 49 (165)
Q Consensus 17 ~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~kp~ 49 (165)
..+||.|+++.-.|+ +++++.+.||....++
T Consensus 7 a~wC~~Ck~~~~~l~--~~~~~~~~vd~~~~~~ 37 (75)
T PHA02125 7 AEWCANCKMVKPMLA--NVEYTYVDVDTDEGVE 37 (75)
T ss_pred CCCCHhHHHHHHHHH--HHhheEEeeeCCCCHH
Confidence 456777998877775 4567777777544333
No 162
>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1. This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.
Probab=63.99 E-value=8.8 Score=22.90 Aligned_cols=32 Identities=28% Similarity=0.477 Sum_probs=21.0
Q ss_pred CCCcHHHHHHHHHHh----CCCCceEEeecCCCCCC
Q 031123 18 GDCPFSQRALLTLEE----KKVPYKRHLINISDKPQ 49 (165)
Q Consensus 18 ~~cP~~~rvr~~l~~----~gi~ye~~~v~~~~kp~ 49 (165)
.+||+|..+.=.++. .+..++...||..+.++
T Consensus 9 ~~C~~C~~~~~~l~~l~~~~~~~~~~~~vd~~~~~~ 44 (82)
T TIGR00411 9 PTCPYCPAAKRVVEEVAKEMGDAVEVEYINVMENPQ 44 (82)
T ss_pred CCCcchHHHHHHHHHHHHHhcCceEEEEEeCccCHH
Confidence 457778888777653 35556777787655444
No 163
>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=56.27 E-value=14 Score=22.72 Aligned_cols=25 Identities=32% Similarity=0.312 Sum_probs=22.1
Q ss_pred CCcHHHHHHHHHHhCCCCceEEeec
Q 031123 19 DCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 19 ~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
.||-|.-..--|+-.+++||.|.|.
T Consensus 11 ~Cpdca~a~eyl~rl~v~yd~VeIt 35 (85)
T COG4545 11 LCPDCAPAVEYLERLNVDYDFVEIT 35 (85)
T ss_pred cCcchHHHHHHHHHcCCCceeeehh
Confidence 4888999999999999999999874
No 164
>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides. AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.
Probab=51.97 E-value=12 Score=23.41 Aligned_cols=25 Identities=8% Similarity=-0.069 Sum_probs=14.5
Q ss_pred CCCcHHHHHHHHHHhC-----CCCceEEee
Q 031123 18 GDCPFSQRALLTLEEK-----KVPYKRHLI 42 (165)
Q Consensus 18 ~~cP~~~rvr~~l~~~-----gi~ye~~~v 42 (165)
+.||+|..+.-++... +|+++.+.+
T Consensus 22 ~~C~~C~~~~~~~~~l~~~~~~i~~~~vd~ 51 (89)
T cd03026 22 LSCHNCPDVVQALNLMAVLNPNIEHEMIDG 51 (89)
T ss_pred CCCCCcHHHHHHHHHHHHHCCCceEEEEEh
Confidence 3477777777766543 455544444
No 165
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=51.53 E-value=8.2 Score=28.91 Aligned_cols=58 Identities=22% Similarity=0.254 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHHHHHHhhhccCCCCCccchHHHHHHHHhhcCccc
Q 031123 76 LEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESF 145 (165)
Q Consensus 76 ~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ri~~~p~~ 145 (165)
..+++.++..|.+ +.|..|.++|-+|+.++.-+.-- +....+++..+|+..+.+.-..
T Consensus 10 ~~glk~l~~sLA~--ks~~~g~~~s~edv~vf~al~~e----------p~s~~~v~~~~w~~~l~a~~~~ 67 (231)
T KOG1668|consen 10 PAGLKKLNKSLAE--KSYIEGYQLSKEDVVVFAALGVE----------PQSARLVNAERWYSKLEALLRL 67 (231)
T ss_pred hhhhhhhhHhhhc--ccCCCCCCcccccceeehhcccC----------cchhhhhHHHHHHHHHHHHHHH
Confidence 5678899999974 79999999999999887633211 1135677788888777664443
No 166
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=51.32 E-value=74 Score=21.51 Aligned_cols=46 Identities=11% Similarity=0.039 Sum_probs=33.3
Q ss_pred EEEEEecCCCCCCCCCCcHHHHHH----HHHHhCCCCceEEeecCCCCCC
Q 031123 4 EICVKAAVGAPDILGDCPFSQRAL----LTLEEKKVPYKRHLINISDKPQ 49 (165)
Q Consensus 4 ~l~~~~~~~~~~~~~~cP~~~rvr----~~l~~~gi~ye~~~v~~~~kp~ 49 (165)
-.|..++-++...=.|||.|.++. =+|++.+-+...+.++..+.|.
T Consensus 29 fvlF~gskd~~tGqSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~ 78 (128)
T KOG3425|consen 29 FVLFLGSKDDTTGQSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPY 78 (128)
T ss_pred EEEEecccCCCCCCcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCc
Confidence 344445554667789999999864 4556677788889998887665
No 167
>COG1102 Cmk Cytidylate kinase [Nucleotide transport and metabolism]
Probab=46.94 E-value=19 Score=25.77 Aligned_cols=28 Identities=18% Similarity=0.103 Sum_probs=25.1
Q ss_pred CceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCc
Q 031123 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPY 37 (165)
Q Consensus 1 ~~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~y 37 (165)
|.|++=+.|||++ +.-.+++.++.|+++
T Consensus 1 m~ItIsG~pGsG~---------TTva~~lAe~~gl~~ 28 (179)
T COG1102 1 MVITISGLPGSGK---------TTVARELAEHLGLKL 28 (179)
T ss_pred CEEEeccCCCCCh---------hHHHHHHHHHhCCce
Confidence 7899999999999 788888999999876
No 168
>PF04827 Plant_tran: Plant transposon protein; InterPro: IPR006912 This entry represents a putative Harbinger transposase-derived nuclease, which is thought to have nuclease activity. However it does not have transposase activity [, ]. ; GO: 0016788 hydrolase activity, acting on ester bonds
Probab=46.45 E-value=1.1e+02 Score=22.50 Aligned_cols=63 Identities=14% Similarity=0.296 Sum_probs=40.0
Q ss_pred CCCCccHHHHhhhhC---CCC-c--------hhHHHHHHHHHHHHHHHHhhCCCCcccCCCCChhhHHHHhHHHH
Q 031123 50 CGSKIFPSFVNFLKS---KDP-N--------DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYH 112 (165)
Q Consensus 50 ~~~~~~~~~~~~~~~---~~~-~--------~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD~~l~~~l~~ 112 (165)
+...++|.+..+.+. +.. . +..++.++++++.|..+..--.++.-.=+.-+++++..++++-+
T Consensus 120 LaDGiYP~watfvktI~~p~~~k~k~fa~~QE~~RKDVErAFGVLQaRfaIi~~p~r~w~~~~l~~Im~aCiILH 194 (205)
T PF04827_consen 120 LADGIYPEWATFVKTISLPQGEKRKLFAKHQESARKDVERAFGVLQARFAIIRGPARLWDREDLANIMRACIILH 194 (205)
T ss_pred eccCcCcchHhHhhhcchhhchhhHHHHHhCHHHHHHHHHHHHHHHHHHHHhcCchhccCHHHHHHHHHHHHHhh
Confidence 667778776554432 111 1 56788999999999988753223333335668888888875443
No 169
>cd04911 ACT_AKiii-YclM-BS_1 ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. Bacillus subtilis YclM is reported to be a single polypeptide of 50 kD. AKIII from Bacillus subtilis strain 168 is induced by lysine and repressed by threonine and it is synergistically inhibited by lysine and threonine. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=45.67 E-value=26 Score=21.49 Aligned_cols=21 Identities=24% Similarity=0.468 Sum_probs=19.1
Q ss_pred HHHHHHHHHHhCCCCceEEee
Q 031123 22 FSQRALLTLEEKKVPYKRHLI 42 (165)
Q Consensus 22 ~~~rvr~~l~~~gi~ye~~~v 42 (165)
|++|+.=.|+..||+||+.+-
T Consensus 17 F~rk~L~I~E~~~is~Eh~PS 37 (76)
T cd04911 17 FGRKLLSILEDNGISYEHMPS 37 (76)
T ss_pred HHHHHHHHHHHcCCCEeeecC
Confidence 789999999999999999964
No 170
>PHA03075 glutaredoxin-like protein; Provisional
Probab=39.98 E-value=34 Score=22.92 Aligned_cols=28 Identities=21% Similarity=0.216 Sum_probs=24.5
Q ss_pred CCCcHHHHHHHHHHhCCCCceEEeecCC
Q 031123 18 GDCPFSQRALLTLEEKKVPYKRHLINIS 45 (165)
Q Consensus 18 ~~cP~~~rvr~~l~~~gi~ye~~~v~~~ 45 (165)
+.||-|+-+.-+|....=+|+..+||.-
T Consensus 11 P~C~vCe~~s~~l~~ledeY~ilrVNIl 38 (123)
T PHA03075 11 PLCSVCESISEALKELEDEYDILRVNIL 38 (123)
T ss_pred cccHHHHHHHHHHHHhhccccEEEEEee
Confidence 4688899999999998889999999864
No 171
>cd02975 PfPDO_like_N Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding. PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions.
Probab=39.63 E-value=21 Score=23.23 Aligned_cols=33 Identities=15% Similarity=0.259 Sum_probs=20.2
Q ss_pred CCCCcHHHHHHHHHHhCCCC---ceEEeecCCCCCC
Q 031123 17 LGDCPFSQRALLTLEEKKVP---YKRHLINISDKPQ 49 (165)
Q Consensus 17 ~~~cP~~~rvr~~l~~~gi~---ye~~~v~~~~kp~ 49 (165)
-.+||+|+.++-+++...-. .+...+|..+.++
T Consensus 31 a~wC~~C~~~~~~l~~la~~~~~i~~~~vd~d~~~~ 66 (113)
T cd02975 31 KEGCQYCEVTKQLLEELSELSDKLKLEIYDFDEDKE 66 (113)
T ss_pred CCCCCChHHHHHHHHHHHHhcCceEEEEEeCCcCHH
Confidence 35899999888888644322 3445565544443
No 172
>PRK11657 dsbG disulfide isomerase/thiol-disulfide oxidase; Provisional
Probab=36.78 E-value=33 Score=26.02 Aligned_cols=25 Identities=16% Similarity=0.433 Sum_probs=16.4
Q ss_pred CCCcHHHHHHHHHHh---CC-CCceEEee
Q 031123 18 GDCPFSQRALLTLEE---KK-VPYKRHLI 42 (165)
Q Consensus 18 ~~cP~~~rvr~~l~~---~g-i~ye~~~v 42 (165)
+.||||+|..-.+.. .| |.+.++.+
T Consensus 127 p~CpyC~kl~~~l~~~~~~g~V~v~~ip~ 155 (251)
T PRK11657 127 PNCPYCKQFWQQARPWVDSGKVQLRHILV 155 (251)
T ss_pred CCChhHHHHHHHHHHHhhcCceEEEEEec
Confidence 469999999777642 33 55555544
No 173
>PF13098 Thioredoxin_2: Thioredoxin-like domain; PDB: 1T3B_A 2L57_A 1EEJ_B 1TJD_A 1JZD_B 1JZO_A 1G0T_B 3GV1_A 1V58_A 2H0H_A ....
Probab=35.35 E-value=21 Score=22.71 Aligned_cols=14 Identities=21% Similarity=0.373 Sum_probs=9.7
Q ss_pred CCCcHHHHHHHHHH
Q 031123 18 GDCPFSQRALLTLE 31 (165)
Q Consensus 18 ~~cP~~~rvr~~l~ 31 (165)
++||||++..-.+.
T Consensus 15 ~~C~~C~~~~~~~~ 28 (112)
T PF13098_consen 15 PWCPYCKKLEKELF 28 (112)
T ss_dssp TT-HHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 46999998866554
No 174
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=34.65 E-value=1e+02 Score=18.41 Aligned_cols=28 Identities=18% Similarity=0.083 Sum_probs=22.6
Q ss_pred CCCCCcHHHHHHHHHHhCCCC---ceEEeec
Q 031123 16 ILGDCPFSQRALLTLEEKKVP---YKRHLIN 43 (165)
Q Consensus 16 ~~~~cP~~~rvr~~l~~~gi~---ye~~~v~ 43 (165)
.--.+|-|-.+...|++.+.+ ++++..+
T Consensus 10 lpsid~ecLa~~~yl~~~~~~~~~~~vv~s~ 40 (72)
T PF10568_consen 10 LPSIDPECLAVIAYLKFAGAPEQQFKVVPSN 40 (72)
T ss_pred CCccCHHHHHHHHHHHhCCCCCceEEEEEcC
Confidence 334568899999999999999 8887654
No 175
>cd03020 DsbA_DsbC_DsbG DsbA family, DsbC and DsbG subfamily; V-shaped homodimeric proteins containing a redox active CXXC motif imbedded in a TRX fold. They function as protein disulfide isomerases and chaperones in the bacterial periplasm to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins. DsbC and DsbG are kept in their reduced state by the cytoplasmic membrane protein DsbD, which utilizes the TRX/TRX reductase system in the cytosol as a source of reducing equivalents. DsbG differ from DsbC in that it has a more limited substrate specificity, and it may preferentially act later in the folding process to catalyze disulfide rearrangements in folded or partially folded proteins. Also included in the alignment is the predicted protein TrbB, whose gene was sequenced from the enterohemorrhagic E. coli type IV pilus gene cluster, which is required for efficient plasmid transfer.
Probab=34.58 E-value=38 Score=24.31 Aligned_cols=26 Identities=19% Similarity=0.411 Sum_probs=17.7
Q ss_pred CCCcHHHHHHHHHHh--CCCCceEEeec
Q 031123 18 GDCPFSQRALLTLEE--KKVPYKRHLIN 43 (165)
Q Consensus 18 ~~cP~~~rvr~~l~~--~gi~ye~~~v~ 43 (165)
+.||||++..-.+.. .++.+..+.+.
T Consensus 87 ~~Cp~C~~~~~~l~~~~~~v~v~~~~~p 114 (197)
T cd03020 87 PDCPYCRKLEKELKPNADGVTVRIFPVP 114 (197)
T ss_pred CCCccHHHHHHHHhhccCceEEEEEEcC
Confidence 469999999888863 45555555443
No 176
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=32.77 E-value=59 Score=21.11 Aligned_cols=23 Identities=39% Similarity=0.307 Sum_probs=19.7
Q ss_pred CCcHHHHHHHHHHhCCCCceEEe
Q 031123 19 DCPFSQRALLTLEEKKVPYKRHL 41 (165)
Q Consensus 19 ~cP~~~rvr~~l~~~gi~ye~~~ 41 (165)
..|...-++.+.+++||+++...
T Consensus 65 ~~pd~~Hl~~LA~ekgVpVe~~~ 87 (100)
T PF15608_consen 65 DDPDLAHLLLLAEEKGVPVEVYP 87 (100)
T ss_pred CCccHHHHHHHHHHcCCcEEEeC
Confidence 35889999999999999988764
No 177
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=30.88 E-value=61 Score=22.84 Aligned_cols=30 Identities=27% Similarity=0.469 Sum_probs=25.5
Q ss_pred CcHHHHHHHHHHhCCCCceEEeecCCCCCC
Q 031123 20 CPFSQRALLTLEEKKVPYKRHLINISDKPQ 49 (165)
Q Consensus 20 cP~~~rvr~~l~~~gi~ye~~~v~~~~kp~ 49 (165)
-|.++++...|+..||+||..-...-..|+
T Consensus 11 ~~~~~~a~~~L~~~gi~~dv~V~SaHRtp~ 40 (156)
T TIGR01162 11 LPTMKKAADILEEFGIPYELRVVSAHRTPE 40 (156)
T ss_pred HHHHHHHHHHHHHcCCCeEEEEECcccCHH
Confidence 478999999999999999999887666555
No 178
>TIGR00106 uncharacterized protein, MTH1187 family. This protein has been crystallized in both Methanobacterium thermoautotrophicum and yeast, but its function remains unknown. Both crystal structures showed sulfate ions bound at the interface of two dimers to form a tetramer.
Probab=30.87 E-value=1.1e+02 Score=19.55 Aligned_cols=39 Identities=15% Similarity=0.192 Sum_probs=28.0
Q ss_pred ceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEee
Q 031123 2 AVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLI 42 (165)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v 42 (165)
.+.+...|-... +--.|+|+.++.=.|+..|++|+.-+.
T Consensus 2 ~aeisv~P~g~~--~~s~s~yVa~~i~~l~~sGl~y~~~pm 40 (97)
T TIGR00106 2 IAEVSIIPIGTV--GASVSSYVAAAIEVLKESGLKYELHPM 40 (97)
T ss_pred EEEEEEeecCCC--CCcHHHHHHHHHHHHHHcCCCeEecCC
Confidence 445566664322 335689999999999999999987754
No 179
>KOG0911 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=28.52 E-value=1.1e+02 Score=23.08 Aligned_cols=27 Identities=22% Similarity=0.315 Sum_probs=24.4
Q ss_pred CCCCCcHHHHHHHHHHhCCCCceEEee
Q 031123 16 ILGDCPFSQRALLTLEEKKVPYKRHLI 42 (165)
Q Consensus 16 ~~~~cP~~~rvr~~l~~~gi~ye~~~v 42 (165)
..+.|-|++++.-+|...|++|+...|
T Consensus 150 ~~P~CGFS~~~v~iL~~~nV~~~~fdI 176 (227)
T KOG0911|consen 150 EEPKCGFSRQLVGILQSHNVNYTIFDV 176 (227)
T ss_pred CcccccccHHHHHHHHHcCCCeeEEec
Confidence 578899999999999999999887766
No 180
>cd02978 KaiB_like KaiB-like family; composed of the circadian clock proteins, KaiB and the N-terminal KaiB-like sensory domain of SasA. KaiB is an essential protein in maintaining circadian rhythm. It was originally discovered from the cyanobacterium Synechococcus as part of the circadian clock gene cluster, kaiABC. KaiB attenuates KaiA-enhanced KaiC autokinase activity by interacting with KaiA-KaiC complexes in a circadian fashion. KaiB is membrane-associated as well as cytosolic. The amount of membrane-associated protein peaks in the evening (at circadian time (CT) 12-16) while the cytosolic form peaks later (at CT 20). The rhythmic localization of KaiB may function in regulating the formation of Kai complexes. SasA is a sensory histidine kinase which associates with KaiC. Although it is not an essential oscillator component, it is important in enhancing kaiABC expression and is important in metabolic growth control under day/night cycle conditions. SasA contains an N-terminal sensor
Probab=28.16 E-value=1.4e+02 Score=18.03 Aligned_cols=38 Identities=32% Similarity=0.462 Sum_probs=26.6
Q ss_pred eEEEEEecCCCCCCCCCCcHHHHHHH----HH-HhCCCCceEEeecCCCCCC
Q 031123 3 VEICVKAAVGAPDILGDCPFSQRALL----TL-EEKKVPYKRHLINISDKPQ 49 (165)
Q Consensus 3 ~~l~~~~~~~~~~~~~~cP~~~rvr~----~l-~~~gi~ye~~~v~~~~kp~ 49 (165)
+.||+...++. |+++-- .| ++++-+|+..-||+.+.|+
T Consensus 4 L~Lyv~g~tp~---------S~~ai~nl~~i~e~~l~~~~~LeVIDv~~~P~ 46 (72)
T cd02978 4 LRLYVAGRTPK---------SERALQNLKRILEELLGGPYELEVIDVLKQPQ 46 (72)
T ss_pred EEEEECCCCch---------HHHHHHHHHHHHHHhcCCcEEEEEEEcccCHh
Confidence 46777666666 554432 23 3568899999999999887
No 181
>COG2879 Uncharacterized small protein [Function unknown]
Probab=27.98 E-value=69 Score=18.88 Aligned_cols=12 Identities=8% Similarity=0.257 Sum_probs=6.2
Q ss_pred hHHHHHHHHhhc
Q 031123 130 AHVHGYTKKLFA 141 (165)
Q Consensus 130 p~l~~w~~ri~~ 141 (165)
|.-..|.+.|++
T Consensus 23 pdYdnYVehmr~ 34 (65)
T COG2879 23 PDYDNYVEHMRK 34 (65)
T ss_pred CcHHHHHHHHHH
Confidence 444455555554
No 182
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=27.90 E-value=46 Score=23.26 Aligned_cols=30 Identities=30% Similarity=0.523 Sum_probs=21.8
Q ss_pred CcHHHHHHHHHHhCCCCceEEeecCCCCCC
Q 031123 20 CPFSQRALLTLEEKKVPYKRHLINISDKPQ 49 (165)
Q Consensus 20 cP~~~rvr~~l~~~gi~ye~~~v~~~~kp~ 49 (165)
-|++++++-.|+..||+|+..-......|+
T Consensus 13 ~~~~~~a~~~L~~~gi~~~~~V~saHR~p~ 42 (150)
T PF00731_consen 13 LPIAEEAAKTLEEFGIPYEVRVASAHRTPE 42 (150)
T ss_dssp HHHHHHHHHHHHHTT-EEEEEE--TTTSHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEeccCCHH
Confidence 488999999999999999987665544443
No 183
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=27.58 E-value=58 Score=24.32 Aligned_cols=15 Identities=7% Similarity=0.341 Sum_probs=11.8
Q ss_pred CCCcHHHHHHHHHHh
Q 031123 18 GDCPFSQRALLTLEE 32 (165)
Q Consensus 18 ~~cP~~~rvr~~l~~ 32 (165)
+.||||+|..=-+..
T Consensus 117 p~CpyCkkl~~~l~~ 131 (232)
T PRK10877 117 ITCGYCHKLHEQMKD 131 (232)
T ss_pred CCChHHHHHHHHHHH
Confidence 479999998776654
No 184
>cd02972 DsbA_family DsbA family; consists of DsbA and DsbA-like proteins, including DsbC, DsbG, glutathione (GSH) S-transferase kappa (GSTK), 2-hydroxychromene-2-carboxylate (HCCA) isomerase, an oxidoreductase (FrnE) presumed to be involved in frenolicin biosynthesis, a 27-kDa outer membrane protein, and similar proteins. Members of this family contain a redox active CXXC motif (except GSTK and HCCA isomerase) imbedded in a TRX fold, and an alpha helical insert of about 75 residues (shorter in DsbC and DsbG) relative to TRX. DsbA is involved in the oxidative protein folding pathway in prokaryotes, catalyzing disulfide bond formation of proteins secreted into the bacterial periplasm. DsbC and DsbG function as protein disulfide isomerases and chaperones to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins.
Probab=26.84 E-value=55 Score=19.49 Aligned_cols=27 Identities=19% Similarity=0.150 Sum_probs=17.2
Q ss_pred CCCcHHHHHHHHHHhC------CCCceEEeecC
Q 031123 18 GDCPFSQRALLTLEEK------KVPYKRHLINI 44 (165)
Q Consensus 18 ~~cP~~~rvr~~l~~~------gi~ye~~~v~~ 44 (165)
..||||....-.+... ++.++.+.+.+
T Consensus 7 ~~Cp~C~~~~~~l~~~~~~~~~~~~~~~~~~~~ 39 (98)
T cd02972 7 PLCPYCYLFEPELEKLLYADDGGVRVVYRPFPL 39 (98)
T ss_pred CCCHhHHhhhHHHHHHHhhcCCcEEEEEecccc
Confidence 4699999988777653 34444444443
No 185
>PF09413 DUF2007: Domain of unknown function (DUF2007); InterPro: IPR018551 This is a family of proteins with unknown function. ; PDB: 2HFV_A.
Probab=26.42 E-value=52 Score=18.99 Aligned_cols=31 Identities=13% Similarity=-0.006 Sum_probs=17.4
Q ss_pred EEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeec
Q 031123 4 EICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLIN 43 (165)
Q Consensus 4 ~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~ 43 (165)
+||......- ++.++-+|+..||++.....+
T Consensus 2 ~l~~~~~~~e---------a~~i~~~L~~~gI~~~v~~~~ 32 (67)
T PF09413_consen 2 KLYTAGDPIE---------AELIKGLLEENGIPAFVKNEH 32 (67)
T ss_dssp EEEEE--HHH---------HHHHHHHHHHTT--EE--S--
T ss_pred EEEEcCCHHH---------HHHHHHHHHhCCCcEEEECCc
Confidence 4555555444 788899999999999887554
No 186
>PF04134 DUF393: Protein of unknown function, DUF393; InterPro: IPR007263 The DCC family, named after the conserved N-terminal DxxCxxC motif, encompasses COG3011 from COG. Proteins in this family are predicted to have a thioredoxin-like fold which, together with the presence of an invariant catalytic cysteine residue, suggests that they are a novel group of thiol-disulphide oxidoreductases []. As some of the bacterial proteins are encoded near penicillin-binding proteins, it has been suggested that these may be involved in redox regulation of cell wall biosynthesis [].
Probab=25.43 E-value=1e+02 Score=19.72 Aligned_cols=27 Identities=26% Similarity=0.604 Sum_probs=18.2
Q ss_pred CCCcHHHHHHHHHHhCCCCceEEeecC
Q 031123 18 GDCPFSQRALLTLEEKKVPYKRHLINI 44 (165)
Q Consensus 18 ~~cP~~~rvr~~l~~~gi~ye~~~v~~ 44 (165)
+.||+|.+..-.+...+..-...-++.
T Consensus 5 g~C~lC~~~~~~l~~~d~~~~l~~~~~ 31 (114)
T PF04134_consen 5 GDCPLCRREVRFLRRRDRGGRLRFVDI 31 (114)
T ss_pred CCCHhHHHHHHHHHhcCCCCCEEEEEC
Confidence 469999999888877765333444443
No 187
>PHA03420 E4 protein; Provisional
Probab=25.04 E-value=1.1e+02 Score=20.60 Aligned_cols=31 Identities=23% Similarity=0.273 Sum_probs=23.5
Q ss_pred CceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCC
Q 031123 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKK 34 (165)
Q Consensus 1 ~~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~g 34 (165)
|.+.||..|. ..+-+.-||-+|+.=-.++++
T Consensus 1 m~vHLYLaPP---~~hPWdTPYYrrlldg~~~~~ 31 (137)
T PHA03420 1 MTVHLYLAPP---LHHPWDTPYYRRLLDGRAENQ 31 (137)
T ss_pred CeeEEEecCC---cCCCcccHHHHHHHhhhhccC
Confidence 8899999873 345677899999876666655
No 188
>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B ....
Probab=24.74 E-value=64 Score=19.19 Aligned_cols=23 Identities=26% Similarity=0.411 Sum_probs=14.5
Q ss_pred CcHHHHHHHHH----HhCCCCceEEee
Q 031123 20 CPFSQRALLTL----EEKKVPYKRHLI 42 (165)
Q Consensus 20 cP~~~rvr~~l----~~~gi~ye~~~v 42 (165)
||+|.++.-++ ...|++++.+.+
T Consensus 10 C~~C~~~~~~~~~~~~~~~i~~ei~~~ 36 (76)
T PF13192_consen 10 CPYCPELVQLLKEAAEELGIEVEIIDI 36 (76)
T ss_dssp CTTHHHHHHHHHHHHHHTTEEEEEEET
T ss_pred CCCcHHHHHHHHHHHHhcCCeEEEEEc
Confidence 67777666544 456777766654
No 189
>COG0011 Uncharacterized conserved protein [Function unknown]
Probab=23.98 E-value=1.5e+02 Score=19.21 Aligned_cols=38 Identities=18% Similarity=0.156 Sum_probs=28.4
Q ss_pred eEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEee
Q 031123 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLI 42 (165)
Q Consensus 3 ~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v 42 (165)
+.+-+-|-.-+ +--.|+|+-++-=.|+..|++|+.-+.
T Consensus 5 v~~sviP~gt~--~~svs~yVa~~i~~lk~~glky~~~pm 42 (100)
T COG0011 5 VELSVIPLGTG--GPSVSKYVAEAIEILKESGLKYQLGPM 42 (100)
T ss_pred EEEEEEecCCC--CCCHHHHHHHHHHHHHHcCCceeecCc
Confidence 45566665544 223789999999999999999987754
No 190
>TIGR01295 PedC_BrcD bacteriocin transport accessory protein, putative. This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.
Probab=23.73 E-value=60 Score=21.51 Aligned_cols=27 Identities=22% Similarity=0.268 Sum_probs=16.9
Q ss_pred CCCCcHHHHHHHHHHh----CCCCceEEeec
Q 031123 17 LGDCPFSQRALLTLEE----KKVPYKRHLIN 43 (165)
Q Consensus 17 ~~~cP~~~rvr~~l~~----~gi~ye~~~v~ 43 (165)
..+||+|+.+.=.|.. .++++-.+.+|
T Consensus 32 ~~~Cp~C~~~~P~l~~~~~~~~~~~y~vdvd 62 (122)
T TIGR01295 32 RKTCPYCRKFSGTLSGVVAQTKAPIYYIDSE 62 (122)
T ss_pred CCCChhHHHHhHHHHHHHHhcCCcEEEEECC
Confidence 4679999997776653 33444444444
No 191
>PF00392 GntR: Bacterial regulatory proteins, gntR family; InterPro: IPR000524 Many bacterial transcription regulation proteins bind DNA through a helix-turn-helix (HTH) motif, which can be classified into subfamilies on the basis of sequence similarities. The HTH GntR family has many members distributed among diverse bacterial groups that regulate various biological processes. It was named GntR after the Bacillus subtilis repressor of the gluconate operon []. Family members include GntR, HutC, KorA, NtaR, FadR, ExuR, FarR, DgoR and PhnF. The crystal structure of the FadR protein has been determined []. In general, these proteins contain a DNA-binding HTH domain at the N terminus, and an effector-binding or oligomerisation domain at the C terminus (IPR011711 from INTERPRO). The DNA-binding domain is well conserved in structure for the whole of the GntR family, consisting of a 3-helical bundle core with a small beta-sheet (wing); the GntR winged helix structure is similar to that found in several other transcriptional regulator families. The regions outside the DNA-binding domain are more variable and are consequently used to define GntR subfamilies []. This entry represents the N-terminal DNA-binding domain of the GntR family.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1HW1_B 1H9T_A 1HW2_A 1H9G_A 1E2X_A 3IHU_A 3C7J_A 2RA5_A 3BY6_C 3IC7_A ....
Probab=22.34 E-value=1.2e+02 Score=17.25 Aligned_cols=30 Identities=13% Similarity=0.295 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHhhCCCCcccCCCC-ChhhHHHH
Q 031123 76 LEELKALDEHLKTHGGPFIAGEKV-TAVDLSLA 107 (165)
Q Consensus 76 ~~~l~~le~~L~~~~~~~l~G~~~-T~AD~~l~ 107 (165)
.+....|.+.+.. +.|-.|+.+ |.++++--
T Consensus 3 ~~i~~~l~~~I~~--g~~~~g~~lps~~~la~~ 33 (64)
T PF00392_consen 3 EQIYDQLRQAILS--GRLPPGDRLPSERELAER 33 (64)
T ss_dssp HHHHHHHHHHHHT--TSS-TTSBE--HHHHHHH
T ss_pred HHHHHHHHHHHHc--CCCCCCCEeCCHHHHHHH
Confidence 3456677777763 678889988 88887643
No 192
>PRK13728 conjugal transfer protein TrbB; Provisional
Probab=21.30 E-value=1.1e+02 Score=22.10 Aligned_cols=28 Identities=11% Similarity=0.357 Sum_probs=16.4
Q ss_pred CCCcHHHHHHHH----HHhCCCCceEEeecCCCC
Q 031123 18 GDCPFSQRALLT----LEEKKVPYKRHLINISDK 47 (165)
Q Consensus 18 ~~cP~~~rvr~~----l~~~gi~ye~~~v~~~~k 47 (165)
.+||||++..=. .+..| ++++.|++.+.
T Consensus 79 swCp~C~~e~P~L~~l~~~~g--~~Vi~Vs~D~~ 110 (181)
T PRK13728 79 GHCPYCHQFDPVLKQLAQQYG--FSVFPYTLDGQ 110 (181)
T ss_pred CCCHhHHHHHHHHHHHHHHcC--CEEEEEEeCCC
Confidence 479999997422 23345 45555555444
No 193
>cd06891 PX_Vps17p The phosphoinositide binding Phox Homology domain of yeast sorting nexin Vps17p. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Vsp17p forms a dimer with Vps5p, the yeast counterpart of human SNX1, and is part of the retromer complex that mediates the transport of the carboxypeptidase Y receptor Vps10p from endosomes to Golgi. Similar to Vps5p and SNX1, Vps17p harbors a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvatur
Probab=20.74 E-value=74 Score=22.00 Aligned_cols=20 Identities=5% Similarity=0.092 Sum_probs=16.4
Q ss_pred cchHHHHHHHHhhcCccccc
Q 031123 128 SLAHVHGYTKKLFALESFQK 147 (165)
Q Consensus 128 ~~p~l~~w~~ri~~~p~~~~ 147 (165)
....|+.|++|+..+|....
T Consensus 110 rr~~LqrfL~RV~~hP~L~~ 129 (140)
T cd06891 110 LKANLQRWFNRVCSDPILIR 129 (140)
T ss_pred HHHHHHHHHHHHhCChhhcc
Confidence 35789999999999996554
No 194
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=20.54 E-value=88 Score=17.50 Aligned_cols=18 Identities=17% Similarity=0.167 Sum_probs=14.1
Q ss_pred CceEEEEEecCCCCCCCC
Q 031123 1 MAVEICVKAAVGAPDILG 18 (165)
Q Consensus 1 ~~~~l~~~~~~~~~~~~~ 18 (165)
|.|+..+.+|++++.+++
T Consensus 22 ~~I~ql~ipGsHns~tyg 39 (51)
T PF03490_consen 22 MAITQLFIPGSHNSGTYG 39 (51)
T ss_pred ceeeeEEecccccccccc
Confidence 678899999999965543
No 195
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=20.44 E-value=1.6e+02 Score=24.70 Aligned_cols=42 Identities=17% Similarity=0.120 Sum_probs=24.5
Q ss_pred ceEEEEEecCCCCCCCCCCcHHHHHHHHHHhCCCCceEEeecCCCCCC
Q 031123 2 AVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQ 49 (165)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~cP~~~rvr~~l~~~gi~ye~~~v~~~~kp~ 49 (165)
.|++++.++|+. ||.+.++.--+...+=..+...+|-..-|+
T Consensus 119 ~i~~fv~~~Cp~------Cp~~v~~~~~~a~~~~~i~~~~id~~~~~~ 160 (517)
T PRK15317 119 HFETYVSLSCHN------CPDVVQALNLMAVLNPNITHTMIDGALFQD 160 (517)
T ss_pred EEEEEEcCCCCC------cHHHHHHHHHHHHhCCCceEEEEEchhCHh
Confidence 467788777777 777666665555442234444455555454
Done!