Query 031128
Match_columns 165
No_of_seqs 248 out of 1776
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 15:13:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031128.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031128hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wfj_A Putative elicitor-respo 100.0 7.3E-27 2.5E-31 157.9 16.2 127 2-164 6-136 (136)
2 2fk9_A Protein kinase C, ETA t 99.9 1.4E-26 4.7E-31 160.0 14.5 120 2-157 25-156 (157)
3 2dmh_A Myoferlin; beta-sandwic 99.9 4.1E-26 1.4E-30 154.9 15.5 124 2-162 3-137 (140)
4 1gmi_A Protein kinase C, epsil 99.9 5.9E-26 2E-30 153.6 13.9 121 1-159 1-134 (136)
5 2ep6_A MCTP2 protein; beta san 99.9 2.2E-26 7.5E-31 155.1 11.4 117 3-158 10-132 (133)
6 3kwu_A MUNC13-1; calcium bindi 99.9 1.8E-25 6.1E-30 153.2 16.1 117 2-157 13-146 (148)
7 1rlw_A Phospholipase A2, CALB 99.9 1.5E-25 5.1E-30 149.5 13.2 116 5-158 2-125 (126)
8 3b7y_A E3 ubiquitin-protein li 99.9 3.6E-25 1.2E-29 152.4 13.2 125 3-158 17-153 (153)
9 2nq3_A Itchy homolog E3 ubiqui 99.9 2.2E-24 7.7E-29 151.5 17.0 126 4-162 34-165 (173)
10 3m7f_B E3 ubiquitin-protein li 99.9 1.1E-24 3.7E-29 153.4 14.0 127 2-159 4-142 (176)
11 3pyc_A E3 ubiquitin-protein li 99.9 5.7E-23 1.9E-27 138.1 16.0 92 4-96 3-100 (132)
12 2b3r_A Phosphatidylinositol-4- 99.9 4.3E-23 1.5E-27 139.2 12.1 93 4-96 18-119 (134)
13 1a25_A CALB, protein kinase C 99.9 2.8E-23 9.5E-28 142.4 8.8 91 5-95 30-128 (149)
14 3rdl_A Protein kinase C alpha 99.9 6.9E-23 2.4E-27 138.3 10.4 93 4-96 14-114 (137)
15 1rsy_A Synaptotagmin I; calciu 99.9 1.4E-22 4.9E-27 139.3 10.7 93 4-96 40-139 (152)
16 2d8k_A Synaptotagmin VII; exoc 99.9 3.4E-22 1.1E-26 135.8 11.2 94 4-97 24-125 (141)
17 3fbk_A RGS3, RGP3, regulator o 99.9 2.8E-22 9.7E-27 138.0 10.6 93 3-95 24-124 (153)
18 3f04_A Synaptotagmin-1; C2A, c 99.9 1.4E-22 4.9E-27 137.9 9.0 94 4-97 32-132 (143)
19 3fdw_A Synaptotagmin-like prot 99.9 3.7E-22 1.3E-26 136.7 10.7 96 4-99 21-126 (148)
20 3jzy_A Intersectin 2; C2 domai 99.9 3E-21 1E-25 155.6 17.5 122 4-158 385-508 (510)
21 2bwq_A Regulating synaptic mem 99.9 4.1E-22 1.4E-26 133.3 9.9 92 4-95 16-119 (129)
22 1rh8_A Piccolo protein; beta-s 99.9 1.2E-22 4E-27 138.1 6.9 93 5-97 17-128 (142)
23 2z0u_A WW domain-containing pr 99.9 2.1E-22 7.3E-27 139.0 7.8 91 4-94 41-141 (155)
24 2chd_A Rabphilin-3A, exophilin 99.9 7.3E-22 2.5E-26 134.2 9.9 95 3-97 26-130 (142)
25 2q3x_A Regulating synaptic mem 99.9 5.8E-22 2E-26 138.9 9.6 92 5-96 29-128 (171)
26 2r83_A Synaptotagmin-1; C2A-C2 99.9 3.5E-21 1.2E-25 144.6 14.0 94 3-96 16-116 (284)
27 1v27_A Regulating synaptic mem 99.9 3.5E-22 1.2E-26 135.5 7.6 92 4-95 19-122 (141)
28 1ugk_A Synaptotagmin IV, KIAA1 99.9 2.2E-21 7.6E-26 131.2 11.3 93 4-96 20-121 (138)
29 2cm5_A Rabphilin-3A; protein t 99.9 1.4E-21 4.7E-26 136.3 10.4 92 4-95 35-135 (166)
30 1wfm_A Synaptotagmin XIII; C2 99.9 2.4E-21 8.3E-26 131.2 10.3 89 4-95 24-120 (138)
31 3n5a_A Synaptotagmin-7; calciu 99.9 1.3E-21 4.4E-26 132.1 8.7 95 3-97 13-116 (138)
32 1tjx_A Similar to synaptotagmi 99.9 6.2E-21 2.1E-25 132.0 11.2 92 4-95 23-123 (159)
33 2dmg_A KIAA1228 protein; beta- 99.9 3.7E-21 1.3E-25 130.7 9.5 93 4-97 22-125 (142)
34 2enp_A B/K protein; C2 type 1, 99.8 2.3E-21 8E-26 132.5 7.9 95 3-97 23-131 (147)
35 3nsj_A Perforin-1; pore formin 99.8 2.7E-20 9.3E-25 150.4 15.1 87 4-91 392-481 (540)
36 3l9b_A Otoferlin; C2-domain, b 99.8 2.7E-19 9.4E-24 119.8 15.1 120 5-162 20-144 (144)
37 1w15_A Synaptotagmin IV; metal 99.8 4E-20 1.4E-24 127.1 10.9 89 4-92 28-125 (153)
38 1dqv_A Synaptotagmin III; beta 99.8 8E-20 2.7E-24 138.2 13.5 91 3-93 17-115 (296)
39 2cjt_A UNC-13 homolog A, MUNC1 99.8 8.1E-20 2.8E-24 122.7 9.8 87 4-95 3-90 (131)
40 2cjs_A UNC-13 homolog A, MUNC1 99.8 2.4E-19 8.1E-24 125.1 8.9 88 3-95 11-99 (167)
41 1djx_A PLC-D1, phosphoinositid 99.8 8.4E-18 2.9E-22 138.3 15.6 92 4-95 495-596 (624)
42 2r83_A Synaptotagmin-1; C2A-C2 99.8 3.7E-18 1.3E-22 128.1 11.2 92 4-95 148-248 (284)
43 1cjy_A CPLA2, protein (cytosol 99.8 2.6E-18 8.8E-23 143.0 10.9 94 3-97 15-116 (749)
44 3bxj_A RAS GTPase-activating p 99.7 5.4E-19 1.8E-23 141.8 1.1 90 4-97 9-106 (483)
45 1dqv_A Synaptotagmin III; beta 99.7 1.6E-17 5.4E-22 125.6 4.6 92 4-95 150-250 (296)
46 3pfq_A PKC-B, PKC-beta, protei 99.6 1E-15 3.4E-20 127.3 9.4 92 5-96 171-270 (674)
47 3qr0_A Phospholipase C-beta (P 99.6 5.6E-14 1.9E-18 118.1 13.9 86 5-97 649-745 (816)
48 3ohm_B 1-phosphatidylinositol- 99.5 4.5E-14 1.6E-18 119.3 11.7 86 5-97 724-819 (885)
49 2zkm_X 1-phosphatidylinositol- 99.5 1.5E-13 5.2E-18 115.7 12.2 86 4-96 676-772 (799)
50 1yrk_A NPKC-delta, protein kin 99.5 1.2E-12 4E-17 85.4 13.1 115 4-157 4-124 (126)
51 2enj_A NPKC-theta, protein kin 99.4 1.5E-12 5E-17 86.0 11.1 116 4-158 8-130 (138)
52 3l4c_A Dedicator of cytokinesi 96.2 0.16 5.4E-06 36.3 11.8 109 3-117 24-158 (220)
53 2wxf_A Phosphatidylinositol-4, 95.9 0.11 3.7E-06 44.9 11.7 103 5-116 216-340 (940)
54 3hhm_A Phosphatidylinositol-4, 95.7 0.15 5.2E-06 44.6 11.8 103 5-115 354-470 (1091)
55 2yrb_A Protein fantom; beta sa 94.6 0.65 2.2E-05 31.3 11.3 92 2-96 14-119 (156)
56 1e7u_A Phosphatidylinositol 3- 94.3 0.55 1.9E-05 40.7 11.3 104 6-116 218-346 (961)
57 2y3a_A Phosphatidylinositol-4, 89.7 0.45 1.5E-05 41.7 5.2 102 5-115 352-485 (1092)
No 1
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.95 E-value=7.3e-27 Score=157.90 Aligned_cols=127 Identities=25% Similarity=0.402 Sum_probs=110.5
Q ss_pred CcccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEECCeEEeccccc-CCCCCeEecEEEEEEeCCCCcEEEEEEeCCCCCC
Q 031128 2 ENLMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGKQKLKTRVVK-NNVNPEWNEDLTLSISDSNLPIKLTVYDKDTFSL 79 (165)
Q Consensus 2 ~~~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~~~~~~T~~~~-~~~~P~w~e~f~f~~~~~~~~l~i~v~d~~~~~~ 79 (165)
..+.|.|.|+|++|++|+..+ .+.+||||+++++++.++|++++ ++.||.|||+|.|.+......|.|+|||++.+++
T Consensus 6 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~~~ 85 (136)
T 1wfj_A 6 SGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGTE 85 (136)
T ss_dssp CCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSCTT
T ss_pred CCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCCCC
Confidence 357899999999999999988 78999999999999999999998 8999999999999998766779999999999999
Q ss_pred CCeeEEEEEechhhhhhhcccccCCCCceEEEEEeeCCCccccccceeEEeCCcEEeeeeeeec--cceeeeEEEEEEEE
Q 031128 80 DDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLR--NVEVGEVKIQLEWI 157 (165)
Q Consensus 80 d~~iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~--~~~~G~l~l~l~~~ 157 (165)
|++||++.++|.++..... ..+.|++|. +...|+|+|.++|.
T Consensus 86 d~~lG~~~i~l~~l~~~~~------------------------------------~~~~w~~L~~~~~~~G~i~l~l~~~ 129 (136)
T 1wfj_A 86 DDAVGEATIPLEPVFVEGS------------------------------------IPPTAYNVVKDEEYKGEIWVALSFK 129 (136)
T ss_dssp TCCSEEEEEESHHHHHHSE------------------------------------EEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred CceEEEEEEEHHHhccCCC------------------------------------CCcEEEEeecCCccCEEEEEEEEEE
Confidence 9999999999999855321 126677764 34589999999999
Q ss_pred eCCCCCC
Q 031128 158 DIPGSRG 164 (165)
Q Consensus 158 ~~~~~~~ 164 (165)
|...+-|
T Consensus 130 p~~~~~g 136 (136)
T 1wfj_A 130 PSGPSSG 136 (136)
T ss_dssp ECCSCCC
T ss_pred eCCCCCC
Confidence 9887654
No 2
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.95 E-value=1.4e-26 Score=160.01 Aligned_cols=120 Identities=18% Similarity=0.314 Sum_probs=101.9
Q ss_pred CcccEEEEEEEEEeeCCCCCC-C----------CCCCcEEEEEECCeE-EecccccCCCCCeEecEEEEEEeCCCCcEEE
Q 031128 2 ENLMGLLRVHVLRGVNLAVRD-V----------VSSDPYVVIKMGKQK-LKTRVVKNNVNPEWNEDLTLSISDSNLPIKL 69 (165)
Q Consensus 2 ~~~~g~L~V~v~~a~~L~~~~-~----------~~~dpyv~v~~~~~~-~~T~~~~~~~~P~w~e~f~f~~~~~~~~l~i 69 (165)
....|.|+|+|++|++|++++ . +.+||||++.++++. .+|++++++.||.|||+|.|.+.. ...|.|
T Consensus 25 ~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~L~~ 103 (157)
T 2fk9_A 25 MKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGHLEL 103 (157)
T ss_dssp CCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEEEE
T ss_pred ccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-CCEEEE
Confidence 457899999999999999876 2 568999999999865 699999999999999999999865 457999
Q ss_pred EEEeCCCCCCCCeeEEEEEechhhhhhhcccccCCCCceEEEEEeeCCCccccccceeEEeCCcEEeeeeeeeccceeee
Q 031128 70 TVYDKDTFSLDDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLRNVEVGE 149 (165)
Q Consensus 70 ~v~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~G~ 149 (165)
+|||++.+++|++||++.|++.++..+... + -..+.|++|. ++|+
T Consensus 104 ~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~--------------------------------~-~~~~~W~~L~--~~G~ 148 (157)
T 2fk9_A 104 AVFHETPLGYDHFVANCTLQFQELLRTTGA--------------------------------S-DTFEGWVDLE--PEGK 148 (157)
T ss_dssp EEEECCSSSSCEEEEEEEEEHHHHHHHHTT--------------------------------C-SEEEEEEECB--SSCE
T ss_pred EEEECCCCCCCCEEEEEEEEHHHhhcccCC--------------------------------C-CcccEEEECC--CCcE
Confidence 999999999999999999999998875100 0 0138999997 5999
Q ss_pred EEEEEEEE
Q 031128 150 VKIQLEWI 157 (165)
Q Consensus 150 l~l~l~~~ 157 (165)
|+|+++|.
T Consensus 149 i~l~l~~~ 156 (157)
T 2fk9_A 149 VFVVITLT 156 (157)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEE
Confidence 99999883
No 3
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.94 E-value=4.1e-26 Score=154.91 Aligned_cols=124 Identities=23% Similarity=0.334 Sum_probs=105.4
Q ss_pred CcccEEEEEEEEEeeCCCCCCCCCCCcEEEEEECCeEEecccccCCCCCeEecEEEEEEeCC----CCcEEEEEEeCCCC
Q 031128 2 ENLMGLLRVHVLRGVNLAVRDVVSSDPYVVIKMGKQKLKTRVVKNNVNPEWNEDLTLSISDS----NLPIKLTVYDKDTF 77 (165)
Q Consensus 2 ~~~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~~~~~~~~T~~~~~~~~P~w~e~f~f~~~~~----~~~l~i~v~d~~~~ 77 (165)
+...|.|.|+|++|++|+..+.+.+||||++++++++++|++++++.||.|||+|.|.+..+ ...|.|+|||++.+
T Consensus 3 s~~~g~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~ 82 (140)
T 2dmh_A 3 SGSSGMLRVIVESASNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETI 82 (140)
T ss_dssp SCBCCEEEEEEEEEESCCCCSSSCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCS
T ss_pred CCCCcEEEEEEEEeeCCCCCCCCCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCC
Confidence 35678999999999999988778899999999999999999999999999999999998653 35599999999999
Q ss_pred CCCCeeEEEEEechhhhhhhcccccCCCCceEEEEEeeCCCccccccceeEEeCCcEEeeeeee---ecc----ceeeeE
Q 031128 78 SLDDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLR---LRN----VEVGEV 150 (165)
Q Consensus 78 ~~d~~iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---l~~----~~~G~l 150 (165)
++|++||++.+++.++..+... +.|++ |.+ ...|+|
T Consensus 83 ~~~~~lG~~~i~l~~l~~~~~~-------------------------------------~~w~~l~~l~~~~~~~~~G~l 125 (140)
T 2dmh_A 83 GQNKLIGTATVALKDLTGDQSR-------------------------------------SLPYKLISLLNEKGQDTGATI 125 (140)
T ss_dssp SSCCCCEEEEEEGGGTCSSSCE-------------------------------------EEEEEEEEEECTTCCEEEEEE
T ss_pred CCCceEEEEEEEHHHhccCCCc-------------------------------------eeEEeeeeccCCCCCCCCCEE
Confidence 9999999999999988654322 55555 433 246999
Q ss_pred EEEEEEEeCCCC
Q 031128 151 KIQLEWIDIPGS 162 (165)
Q Consensus 151 ~l~l~~~~~~~~ 162 (165)
+|+++|.|.++.
T Consensus 126 ~l~~~~~p~~~~ 137 (140)
T 2dmh_A 126 DLVIGYDPPSGP 137 (140)
T ss_dssp EEEEEECCCBSS
T ss_pred EEEEEEECCCCC
Confidence 999999997764
No 4
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.94 E-value=5.9e-26 Score=153.60 Aligned_cols=121 Identities=17% Similarity=0.374 Sum_probs=103.4
Q ss_pred CCcccEEEEEEEEEeeCCCCCC-CCC-----------CCcEEEEEECCeE-EecccccCCCCCeEecEEEEEEeCCCCcE
Q 031128 1 MENLMGLLRVHVLRGVNLAVRD-VVS-----------SDPYVVIKMGKQK-LKTRVVKNNVNPEWNEDLTLSISDSNLPI 67 (165)
Q Consensus 1 ~~~~~g~L~V~v~~a~~L~~~~-~~~-----------~dpyv~v~~~~~~-~~T~~~~~~~~P~w~e~f~f~~~~~~~~l 67 (165)
|....|.|.|+|++|++|++.+ .+. +||||++.+++.. .+|++++++.||.|||+|.|.+... ..|
T Consensus 1 m~~~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L 79 (136)
T 1gmi_A 1 MVVFNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKI 79 (136)
T ss_dssp CCCEEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEE
T ss_pred CcccceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEE
Confidence 6677899999999999999877 333 8999999998765 5999999999999999999998765 679
Q ss_pred EEEEEeCCCCCCCCeeEEEEEechhhhhhhcccccCCCCceEEEEEeeCCCccccccceeEEeCCcEEeeeeeeecccee
Q 031128 68 KLTVYDKDTFSLDDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLRNVEV 147 (165)
Q Consensus 68 ~i~v~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~ 147 (165)
.|+|||++.+++|++||.+.+++.++..+... ..+.|++|. +.
T Consensus 80 ~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~-----------------------------------~~~~w~~L~--~~ 122 (136)
T 1gmi_A 80 ELAVFHDAPIGYDDFVANCTIQFEELLQNGSR-----------------------------------HFEDWIDLE--PE 122 (136)
T ss_dssp EEEEEECCSSSSCEEEEEEEEEHHHHTSTTCS-----------------------------------EEEEEEECB--SS
T ss_pred EEEEEeCCCCCCCCEEEEEEEEHHHhcccCCC-----------------------------------CccEEEEcC--CC
Confidence 99999999999999999999999988764211 127899887 58
Q ss_pred eeEEEEEEEEeC
Q 031128 148 GEVKIQLEWIDI 159 (165)
Q Consensus 148 G~l~l~l~~~~~ 159 (165)
|+|+|+++|.+-
T Consensus 123 G~i~l~l~~~~~ 134 (136)
T 1gmi_A 123 GKVYVIIDLSGS 134 (136)
T ss_dssp CEEEEEEEEEEE
T ss_pred eEEEEEEEEEec
Confidence 999999999763
No 5
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.94 E-value=2.2e-26 Score=155.08 Aligned_cols=117 Identities=28% Similarity=0.497 Sum_probs=103.5
Q ss_pred cccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEECCeEEecccccCCCCCeEecEEEEEEeCCCCcEEEEEEeCCCCCCCC
Q 031128 3 NLMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGKQKLKTRVVKNNVNPEWNEDLTLSISDSNLPIKLTVYDKDTFSLDD 81 (165)
Q Consensus 3 ~~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~~~~~~T~~~~~~~~P~w~e~f~f~~~~~~~~l~i~v~d~~~~~~d~ 81 (165)
.+.|.|.|+|++|++|+..+ .+.+||||++.+++++++|++++++.||.|||+|.|.+.+....|.|+|||++.+++|+
T Consensus 10 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~~~~~ 89 (133)
T 2ep6_A 10 KDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGDKPPD 89 (133)
T ss_dssp CCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETTEEEE
T ss_pred CCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCCCCCC
Confidence 57899999999999999988 78999999999999999999999999999999999999877777999999999998999
Q ss_pred eeEEEEEechhhhhhhcccccCCCCceEEEEEeeCCCccccccceeEEeCCcEEeeeeeeecc-----ceeeeEEEEEEE
Q 031128 82 KMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLRN-----VEVGEVKIQLEW 156 (165)
Q Consensus 82 ~iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~-----~~~G~l~l~l~~ 156 (165)
+||++.+++.++..+. ..|++|.. ...|+|+|+++|
T Consensus 90 ~lG~~~i~l~~l~~~~---------------------------------------~~w~~L~~~~~~~~~~G~i~l~i~~ 130 (133)
T 2ep6_A 90 FLGKVAIPLLSIRDGQ---------------------------------------PNCYVLKNKDLEQAFKGVIYLEMDL 130 (133)
T ss_dssp ECCBCEEEGGGCCSSC---------------------------------------CEECCCBCSCTTSCCSSEEEEEEEE
T ss_pred eeEEEEEEHHHccCCC---------------------------------------ceEEEeecCCCCCccceEEEEEEEE
Confidence 9999999998875421 45666653 357999999999
Q ss_pred Ee
Q 031128 157 ID 158 (165)
Q Consensus 157 ~~ 158 (165)
+.
T Consensus 131 ~~ 132 (133)
T 2ep6_A 131 IY 132 (133)
T ss_dssp EE
T ss_pred Ee
Confidence 75
No 6
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.94 E-value=1.8e-25 Score=153.16 Aligned_cols=117 Identities=25% Similarity=0.451 Sum_probs=101.4
Q ss_pred CcccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEECCeEEecccccCCCCCeEecEEEEEEeCCCCcEEEEEEeCCCC---
Q 031128 2 ENLMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGKQKLKTRVVKNNVNPEWNEDLTLSISDSNLPIKLTVYDKDTF--- 77 (165)
Q Consensus 2 ~~~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~~~~~~T~~~~~~~~P~w~e~f~f~~~~~~~~l~i~v~d~~~~--- 77 (165)
+...|.|.|+|++|++|+..+ .+.+||||++.++++.++|++++++.||.|||+|.|.+..+...|.|+|||++..
T Consensus 13 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~ 92 (148)
T 3kwu_A 13 SKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKS 92 (148)
T ss_dssp --CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHH
T ss_pred cccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCccc
Confidence 456799999999999999988 8899999999999999999999999999999999999987777799999999985
Q ss_pred --------CCCCeeEEEEEechhhhhhhcccccCCCCceEEEEEeeCCCccccccceeEEeCCcEEeeeeeeeccc----
Q 031128 78 --------SLDDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLRNV---- 145 (165)
Q Consensus 78 --------~~d~~iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~---- 145 (165)
++|++||++.+++.++... .+.|++|...
T Consensus 93 ~~~~~~~~~~~~~lG~~~i~l~~l~~~---------------------------------------~~~w~~L~~~~~~~ 133 (148)
T 3kwu_A 93 RVKQRFKRESDDFLGQTIIEVRTLSGE---------------------------------------MDVWYNLDKRTDKS 133 (148)
T ss_dssp HHHTTTSSCSSEEEEEEEEEGGGCCSE---------------------------------------EEEEEECBCSSTTC
T ss_pred cccccccCCCCccEEEEEEEHHHCcCC---------------------------------------CCEEEEcccCCCCC
Confidence 7899999999999887321 1677777632
Q ss_pred -eeeeEEEEEEEE
Q 031128 146 -EVGEVKIQLEWI 157 (165)
Q Consensus 146 -~~G~l~l~l~~~ 157 (165)
..|+|+|+++|.
T Consensus 134 ~~~G~i~l~l~~e 146 (148)
T 3kwu_A 134 AVSGAIRLHISVE 146 (148)
T ss_dssp CCCCEEEEEEEEE
T ss_pred CCceEEEEEEEEE
Confidence 479999999874
No 7
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.93 E-value=1.5e-25 Score=149.50 Aligned_cols=116 Identities=23% Similarity=0.418 Sum_probs=100.9
Q ss_pred cEEEEEEEEEeeCCCCC---C-CCCCCcEEEEEECC---eEEecccccCCCCCeEecEEEEEEeCC-CCcEEEEEEeCCC
Q 031128 5 MGLLRVHVLRGVNLAVR---D-VVSSDPYVVIKMGK---QKLKTRVVKNNVNPEWNEDLTLSISDS-NLPIKLTVYDKDT 76 (165)
Q Consensus 5 ~g~L~V~v~~a~~L~~~---~-~~~~dpyv~v~~~~---~~~~T~~~~~~~~P~w~e~f~f~~~~~-~~~l~i~v~d~~~ 76 (165)
.|.|.|+|++|++|+.. + .+.+||||++.+++ ..++|++++++.||.|||+|.|.+..+ ...|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 58999999999999984 4 68899999999985 788999999999999999999999644 3559999999998
Q ss_pred CCCCCeeEEEEEechhhhhhhcccccCCCCceEEEEEeeCCCccccccceeEEeCCcEEeeeeeeeccceeeeEEEEEEE
Q 031128 77 FSLDDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLRNVEVGEVKIQLEW 156 (165)
Q Consensus 77 ~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~G~l~l~l~~ 156 (165)
+ +|++||++.++|.++..+... +.|++|....+|.|++.++.
T Consensus 82 ~-~~~~iG~~~i~l~~l~~~~~~-------------------------------------~~~~~L~~~~~g~i~~~le~ 123 (126)
T 1rlw_A 82 V-MDETLGTATFTVSSMKVGEKK-------------------------------------EVPFIFNQVTEMVLEMSLEV 123 (126)
T ss_dssp S-CCEEEEEEEEEGGGSCTTCEE-------------------------------------EEEEEETTTEEEEEEEEEEC
T ss_pred C-CCceeEEEEEEHHHccCCCcE-------------------------------------EEEEEcCCCceEEEEEEEEe
Confidence 8 589999999999988664432 88999999889999999886
Q ss_pred Ee
Q 031128 157 ID 158 (165)
Q Consensus 157 ~~ 158 (165)
.|
T Consensus 124 ~~ 125 (126)
T 1rlw_A 124 AS 125 (126)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 8
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.93 E-value=3.6e-25 Score=152.44 Aligned_cols=125 Identities=22% Similarity=0.446 Sum_probs=98.0
Q ss_pred cccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEECC------eEEecccccCCCCCeEecEEEEEEeCCCCcEEEEEEeCC
Q 031128 3 NLMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK------QKLKTRVVKNNVNPEWNEDLTLSISDSNLPIKLTVYDKD 75 (165)
Q Consensus 3 ~~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~~------~~~~T~~~~~~~~P~w~e~f~f~~~~~~~~l~i~v~d~~ 75 (165)
...+.|.|+|++|++|+..+ .+.+||||++++.. ..++|++++++.||.|||+|.|.+......|.|+|||++
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~d~d 96 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFDEN 96 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEEECC
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEEECC
Confidence 46789999999999999988 78899999999873 578999999999999999999999876667999999999
Q ss_pred CCCCCCeeEEEEEechhhhhhhcccccCCCCceEEEEEeeCCCccccccceeEEeCCcEEeeeeeeecc-----ceeeeE
Q 031128 76 TFSLDDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLRN-----VEVGEV 150 (165)
Q Consensus 76 ~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~-----~~~G~l 150 (165)
.+++|++||++.++|.++..+.... ..-..+.|++|.. ...|+|
T Consensus 97 ~~~~d~~iG~~~i~l~~l~~~~~~~-------------------------------~~~~~~~w~~L~~~~~~~~~~G~i 145 (153)
T 3b7y_A 97 RLTRDDFLGQVDVPLYPLPTENPRL-------------------------------ERPYTFKDFVLHPRSHKSRVKGYL 145 (153)
T ss_dssp SSSCCEEEEEEEEECCSCCBCCTTS-------------------------------CCCCCCEEEECBCSSTTCCCCSEE
T ss_pred CCcCCCeeEEEEEEHHHcccCCCcc-------------------------------cccccccccccccccCCCCcceEE
Confidence 9999999999999999886643210 0001145666643 347999
Q ss_pred EEEEEEEe
Q 031128 151 KIQLEWID 158 (165)
Q Consensus 151 ~l~l~~~~ 158 (165)
+|+++|+|
T Consensus 146 ~l~l~~~P 153 (153)
T 3b7y_A 146 RLKMTYLP 153 (153)
T ss_dssp EEEEEECC
T ss_pred EEEEEEeC
Confidence 99999986
No 9
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.93 E-value=2.2e-24 Score=151.46 Aligned_cols=126 Identities=22% Similarity=0.376 Sum_probs=102.7
Q ss_pred ccEEEEEEEEEeeCCCC-CCCCCCCcEEEEEECCeEEecccccCCCCCeEecEEEEEEeCCCCcEEEEEEeCCCCCCCCe
Q 031128 4 LMGLLRVHVLRGVNLAV-RDVVSSDPYVVIKMGKQKLKTRVVKNNVNPEWNEDLTLSISDSNLPIKLTVYDKDTFSLDDK 82 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~-~~~~~~dpyv~v~~~~~~~~T~~~~~~~~P~w~e~f~f~~~~~~~~l~i~v~d~~~~~~d~~ 82 (165)
..+.|.|+|++|++|+. .+.+.+||||+++++++.++|++++++.||.|||+|.|.+. +...|.|+|||++.+++|++
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~-~~~~L~~~V~D~d~~~~dd~ 112 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVT-PVSKLHFRVWSHQTLKSDVL 112 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEEC-TTCEEEEEEEECCSSSCCEE
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeC-CCCEEEEEEEECCCCCCCce
Confidence 56889999999999994 44556999999999999999999999999999999999985 46679999999999999999
Q ss_pred eEEEEEechhhhhhhcccccCCCCceEEEEEeeCCCccccccceeEEeCCcEEeeeeeeeccc-----eeeeEEEEEEEE
Q 031128 83 MGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLRNV-----EVGEVKIQLEWI 157 (165)
Q Consensus 83 iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~-----~~G~l~l~l~~~ 157 (165)
||++.++|.++......... ..+.|++|... ..|+|.+.|.++
T Consensus 113 lG~~~i~l~~l~~~~~~~~~--------------------------------~~~~~~~L~~~~~~~~~~G~L~v~l~~l 160 (173)
T 2nq3_A 113 LGTAALDIYETLKSNNMKLE--------------------------------EVVVTLQLGGDKEPTETIGDLSICLDGL 160 (173)
T ss_dssp EEEEEEEHHHHHHHTTTEES--------------------------------SEEEEEEEEESSCTTSEEEEEEEEEESE
T ss_pred EEEEEEEHHHhcccCCCCcc--------------------------------eeEEEEECccCCCCCcccEEEEEEEeee
Confidence 99999999998875432000 01456766543 589999999999
Q ss_pred eCCCC
Q 031128 158 DIPGS 162 (165)
Q Consensus 158 ~~~~~ 162 (165)
++...
T Consensus 161 ~~~~~ 165 (173)
T 2nq3_A 161 QLESE 165 (173)
T ss_dssp ECC--
T ss_pred ecchh
Confidence 88554
No 10
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.93 E-value=1.1e-24 Score=153.45 Aligned_cols=127 Identities=22% Similarity=0.436 Sum_probs=96.8
Q ss_pred CcccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEECC------eEEecccccCCCCCeEecEEEEEEeCCCCcEEEEEEeC
Q 031128 2 ENLMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK------QKLKTRVVKNNVNPEWNEDLTLSISDSNLPIKLTVYDK 74 (165)
Q Consensus 2 ~~~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~~------~~~~T~~~~~~~~P~w~e~f~f~~~~~~~~l~i~v~d~ 74 (165)
.+..|.|.|+|++|++|+..+ .+.+||||++++.. ..++|++++++.||.|||.|.|.+......|.|+|||+
T Consensus 4 ~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d~ 83 (176)
T 3m7f_B 4 NDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFDE 83 (176)
T ss_dssp CTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEEC
T ss_pred CCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEEC
Confidence 357899999999999999988 78999999999974 67899999999999999999999987666799999999
Q ss_pred CCCCCCCeeEEEEEechhhhhhhcccccCCCCceEEEEEeeCCCccccccceeEEeCCcEEeeeeeeeccc-----eeee
Q 031128 75 DTFSLDDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLRNV-----EVGE 149 (165)
Q Consensus 75 ~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~-----~~G~ 149 (165)
+.+++|++||++.++|.++....... . ......|++|... ..|+
T Consensus 84 d~~~~d~~lG~~~i~l~~l~~~~~~~-------~------------------------~~~~~~w~~L~~~~~~~~~~G~ 132 (176)
T 3m7f_B 84 NRLTRDDFLGQVDVPLYPLPTENPRM-------E------------------------RPYTFKDFVLHPRSHKSRVKGY 132 (176)
T ss_dssp C----CEEEEEEEEESCSCCBC-------------------------------------CCCCEEEECBCSSTTCCCCSE
T ss_pred CCCCCCcEEEEEEEEHHHccccCCcc-------c------------------------ccccccEEEccccCCCCccCEE
Confidence 99999999999999999887643210 0 0000256776542 3799
Q ss_pred EEEEEEEEeC
Q 031128 150 VKIQLEWIDI 159 (165)
Q Consensus 150 l~l~l~~~~~ 159 (165)
|+|.+.|+|.
T Consensus 133 l~l~l~~~p~ 142 (176)
T 3m7f_B 133 LRLKMTYLPK 142 (176)
T ss_dssp EEEEEEECC-
T ss_pred EEEEEEEEeC
Confidence 9999999986
No 11
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.91 E-value=5.7e-23 Score=138.11 Aligned_cols=92 Identities=24% Similarity=0.403 Sum_probs=82.2
Q ss_pred ccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEECC--eEEecccccCCCCCeEecEEEEEEeCCCCcEEEEEEeCCCCCC-
Q 031128 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK--QKLKTRVVKNNVNPEWNEDLTLSISDSNLPIKLTVYDKDTFSL- 79 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~~--~~~~T~~~~~~~~P~w~e~f~f~~~~~~~~l~i~v~d~~~~~~- 79 (165)
....|.|+|++|++|+..+ .+.+||||++.++. +.++|++++++.||.|||.|.|.+.... .|.|+|||++.+++
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~~~~ 81 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD-SITISVWNHKKIHKK 81 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC-CEEEEEEEGGGTTSS
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC-EEEEEEEECCCCCCC
Confidence 3568999999999999988 78999999999974 7899999999999999999999997654 59999999999876
Q ss_pred --CCeeEEEEEechhhhhh
Q 031128 80 --DDKMGDAEFYITPFLEA 96 (165)
Q Consensus 80 --d~~iG~~~i~l~~l~~~ 96 (165)
|++||++.+++.++...
T Consensus 82 ~~d~~lG~~~i~l~~l~~~ 100 (132)
T 3pyc_A 82 QGAGFLGCVRLLSNAISRL 100 (132)
T ss_dssp TTTTEEEEEEECHHHHHHH
T ss_pred CCCCceEEEEEeHHHhhcc
Confidence 89999999999988553
No 12
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.90 E-value=4.3e-23 Score=139.19 Aligned_cols=93 Identities=24% Similarity=0.336 Sum_probs=81.3
Q ss_pred ccEEEEEEEEEeeCCCCCCCCCCCcEEEEEE-----CCeEEecccccCCCCCeEecEEEEE-EeC---CCCcEEEEEEeC
Q 031128 4 LMGLLRVHVLRGVNLAVRDVVSSDPYVVIKM-----GKQKLKTRVVKNNVNPEWNEDLTLS-ISD---SNLPIKLTVYDK 74 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~~-----~~~~~~T~~~~~~~~P~w~e~f~f~-~~~---~~~~l~i~v~d~ 74 (165)
..+.|.|+|++|++|+....+.+||||++++ ...+++|++++++.||.|||+|.|. +.. ....|.|+|||+
T Consensus 18 ~~~~L~V~V~~a~~L~~~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~ 97 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVTEDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSA 97 (134)
T ss_dssp ETTEEEEEEEEEECCCCTTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEEC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEEC
Confidence 4678999999999999733788999999998 3567899999999999999999999 653 235699999999
Q ss_pred CCCCCCCeeEEEEEechhhhhh
Q 031128 75 DTFSLDDKMGDAEFYITPFLEA 96 (165)
Q Consensus 75 ~~~~~d~~iG~~~i~l~~l~~~ 96 (165)
+.++++++||++.++|.++..+
T Consensus 98 d~~~~~~~lG~~~i~l~~l~~~ 119 (134)
T 2b3r_A 98 ESLRENFFLGGITLPLKDFNLS 119 (134)
T ss_dssp CSSSCCEEEEEEEEEGGGSCTT
T ss_pred CCCCCCcEEEEEEEEhhhccCC
Confidence 9999999999999999988654
No 13
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.89 E-value=2.8e-23 Score=142.42 Aligned_cols=91 Identities=34% Similarity=0.498 Sum_probs=82.2
Q ss_pred cEEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC-----CeEEecccccCCCCCeEecEEEEEEeCCC--CcEEEEEEeCCC
Q 031128 5 MGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG-----KQKLKTRVVKNNVNPEWNEDLTLSISDSN--LPIKLTVYDKDT 76 (165)
Q Consensus 5 ~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~-----~~~~~T~~~~~~~~P~w~e~f~f~~~~~~--~~l~i~v~d~~~ 76 (165)
.+.|.|+|++|++|+..+ .+.+||||++++. ...++|++++++.||.|||+|.|.+...+ ..|.|+|||++.
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 109 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 109 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC
Confidence 468999999999999988 7889999999997 46889999999999999999999987542 469999999999
Q ss_pred CCCCCeeEEEEEechhhhh
Q 031128 77 FSLDDKMGDAEFYITPFLE 95 (165)
Q Consensus 77 ~~~d~~iG~~~i~l~~l~~ 95 (165)
+++|++||++.++|.++..
T Consensus 110 ~~~~~~iG~~~i~l~~l~~ 128 (149)
T 1a25_A 110 TSRNDFMGSLSFGISELQK 128 (149)
T ss_dssp SSCCEEEEEEEEEHHHHTT
T ss_pred CCCCCEEEEEEEEHHHhCc
Confidence 9999999999999998865
No 14
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.89 E-value=6.9e-23 Score=138.32 Aligned_cols=93 Identities=30% Similarity=0.505 Sum_probs=83.4
Q ss_pred ccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEE-----CCeEEecccccCCCCCeEecEEEEEEeCCC--CcEEEEEEeCC
Q 031128 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKM-----GKQKLKTRVVKNNVNPEWNEDLTLSISDSN--LPIKLTVYDKD 75 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~-----~~~~~~T~~~~~~~~P~w~e~f~f~~~~~~--~~l~i~v~d~~ 75 (165)
..|.|.|+|++|++|+..+ .+.+||||++.+ ....++|++++++.||.|||.|.|.+.... ..|.|+|||++
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d 93 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWD 93 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECC
Confidence 3578999999999999988 789999999999 467889999999999999999999986543 45999999999
Q ss_pred CCCCCCeeEEEEEechhhhhh
Q 031128 76 TFSLDDKMGDAEFYITPFLEA 96 (165)
Q Consensus 76 ~~~~d~~iG~~~i~l~~l~~~ 96 (165)
.+++|++||++.++|.++...
T Consensus 94 ~~~~~~~iG~~~i~l~~l~~~ 114 (137)
T 3rdl_A 94 RTTRNDFMGSLSFGVSELMKM 114 (137)
T ss_dssp SSSCCEEEEEEEEEHHHHHHS
T ss_pred CCCCCceEEEEEEeHHHhccC
Confidence 999999999999999999763
No 15
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.88 E-value=1.4e-22 Score=139.35 Aligned_cols=93 Identities=29% Similarity=0.430 Sum_probs=82.5
Q ss_pred ccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC---CeEEecccccCCCCCeEecEEEEEEeCC---CCcEEEEEEeCCC
Q 031128 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG---KQKLKTRVVKNNVNPEWNEDLTLSISDS---NLPIKLTVYDKDT 76 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~---~~~~~T~~~~~~~~P~w~e~f~f~~~~~---~~~l~i~v~d~~~ 76 (165)
..+.|.|+|++|++|+..+ .+.+||||++.+. ...++|++++++.||.|||+|.|.+... ...|.|+|||++.
T Consensus 40 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 119 (152)
T 1rsy_A 40 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR 119 (152)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS
T ss_pred CCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCC
Confidence 4678999999999999988 7889999999994 5678999999999999999999988642 4569999999999
Q ss_pred CCCCCeeEEEEEechhhhhh
Q 031128 77 FSLDDKMGDAEFYITPFLEA 96 (165)
Q Consensus 77 ~~~d~~iG~~~i~l~~l~~~ 96 (165)
++++++||++.++|.++..+
T Consensus 120 ~~~~~~iG~~~i~l~~l~~~ 139 (152)
T 1rsy_A 120 FSKHDIIGEFKVPMNTVDFG 139 (152)
T ss_dssp SSCCEEEEEEEEEGGGCCCS
T ss_pred CCCCcEEEEEEEEchhccCC
Confidence 98999999999999987553
No 16
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.88 E-value=3.4e-22 Score=135.76 Aligned_cols=94 Identities=30% Similarity=0.455 Sum_probs=82.6
Q ss_pred ccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC---CeEEecccccCCCCCeEecEEEEEEeC----CCCcEEEEEEeCC
Q 031128 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG---KQKLKTRVVKNNVNPEWNEDLTLSISD----SNLPIKLTVYDKD 75 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~---~~~~~T~~~~~~~~P~w~e~f~f~~~~----~~~~l~i~v~d~~ 75 (165)
..+.|.|+|++|++|+..+ .+.+||||++++. ...++|++++++.||.|||+|.|.+.. ....|.|+|||++
T Consensus 24 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d 103 (141)
T 2d8k_A 24 QESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYD 103 (141)
T ss_dssp SSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECC
T ss_pred CCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECC
Confidence 5678999999999999988 7889999999994 468899999999999999999998532 2356999999999
Q ss_pred CCCCCCeeEEEEEechhhhhhh
Q 031128 76 TFSLDDKMGDAEFYITPFLEAL 97 (165)
Q Consensus 76 ~~~~d~~iG~~~i~l~~l~~~~ 97 (165)
.++++++||++.+++.++..+.
T Consensus 104 ~~~~~~~iG~~~i~l~~l~~~~ 125 (141)
T 2d8k_A 104 RFSRNDPIGEVSIPLNKVDLTQ 125 (141)
T ss_dssp SSSSCEEEEEEEEETTTSCTTS
T ss_pred CCCCCcEEEEEEEEhhhhcCCC
Confidence 9999999999999999887643
No 17
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.88 E-value=2.8e-22 Score=138.01 Aligned_cols=93 Identities=23% Similarity=0.395 Sum_probs=81.6
Q ss_pred cccEEEEEEEEEeeCCCCCCCCCCCcEEEEEEC-----CeEEecccccCCCCCeEecEEEEEEe--CCCCcEEEEEEeCC
Q 031128 3 NLMGLLRVHVLRGVNLAVRDVVSSDPYVVIKMG-----KQKLKTRVVKNNVNPEWNEDLTLSIS--DSNLPIKLTVYDKD 75 (165)
Q Consensus 3 ~~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~~~-----~~~~~T~~~~~~~~P~w~e~f~f~~~--~~~~~l~i~v~d~~ 75 (165)
...+.|.|+|++|++|+..+.+.+||||++.+. ...++|++++++.||.|||+|.|.+. .....|.|+|||++
T Consensus 24 ~~~~~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d 103 (153)
T 3fbk_A 24 AQDRVLLLHIIEGKGLISKQPGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRA 103 (153)
T ss_dssp ESSSEEEEEEEEEESCCCCSSSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECC
T ss_pred CCCCEEEEEEEEeeCCCCCCCCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCC
Confidence 356889999999999998887889999999983 45789999999999999999999984 33355999999999
Q ss_pred CCCC-CCeeEEEEEechhhhh
Q 031128 76 TFSL-DDKMGDAEFYITPFLE 95 (165)
Q Consensus 76 ~~~~-d~~iG~~~i~l~~l~~ 95 (165)
.+++ |++||++.++|.++..
T Consensus 104 ~~~~~d~~lG~~~i~l~~l~~ 124 (153)
T 3fbk_A 104 SQSRQSGLIGCMSFGVKSLLT 124 (153)
T ss_dssp SSGGGCEEEEEEEEEHHHHTC
T ss_pred CCCCCCcEEEEEEEEHHHhcC
Confidence 9877 9999999999998864
No 18
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.88 E-value=1.4e-22 Score=137.85 Aligned_cols=94 Identities=29% Similarity=0.430 Sum_probs=83.4
Q ss_pred ccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEE---CCeEEecccccCCCCCeEecEEEEEEeCC---CCcEEEEEEeCCC
Q 031128 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKM---GKQKLKTRVVKNNVNPEWNEDLTLSISDS---NLPIKLTVYDKDT 76 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~---~~~~~~T~~~~~~~~P~w~e~f~f~~~~~---~~~l~i~v~d~~~ 76 (165)
..+.|.|+|++|++|+..+ .+.+||||++.+ +.+.++|++++++.||.|||+|.|.+... ...|.|+|||++.
T Consensus 32 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 111 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR 111 (143)
T ss_dssp TTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS
T ss_pred CCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCC
Confidence 5678999999999999988 788999999999 45688999999999999999999998643 2569999999999
Q ss_pred CCCCCeeEEEEEechhhhhhh
Q 031128 77 FSLDDKMGDAEFYITPFLEAL 97 (165)
Q Consensus 77 ~~~d~~iG~~~i~l~~l~~~~ 97 (165)
+++|++||++.++|.++..+.
T Consensus 112 ~~~~~~iG~~~i~l~~l~~~~ 132 (143)
T 3f04_A 112 FSKHDIIGEFKVPMNTVDFGH 132 (143)
T ss_dssp SSCCEEEEEEEEEGGGCCTTS
T ss_pred CCCCceEEEEEEEHHHccCCC
Confidence 999999999999999886643
No 19
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.88 E-value=3.7e-22 Score=136.67 Aligned_cols=96 Identities=28% Similarity=0.398 Sum_probs=84.3
Q ss_pred ccEEEEEEEEEeeCCCCCC--CCCCCcEEEEEEC-----CeEEecccccCCCCCeEecEEEEEEeCCC---CcEEEEEEe
Q 031128 4 LMGLLRVHVLRGVNLAVRD--VVSSDPYVVIKMG-----KQKLKTRVVKNNVNPEWNEDLTLSISDSN---LPIKLTVYD 73 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~--~~~~dpyv~v~~~-----~~~~~T~~~~~~~~P~w~e~f~f~~~~~~---~~l~i~v~d 73 (165)
..+.|.|+|++|++|+..+ .+.+||||++.+. ..+++|++++++.||.|||+|.|.+.... ..|.|+|||
T Consensus 21 ~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d 100 (148)
T 3fdw_A 21 QTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWH 100 (148)
T ss_dssp TTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEE
Confidence 4678999999999999876 6789999999987 34889999999999999999999987643 349999999
Q ss_pred CCCCCCCCeeEEEEEechhhhhhhcc
Q 031128 74 KDTFSLDDKMGDAEFYITPFLEALKM 99 (165)
Q Consensus 74 ~~~~~~d~~iG~~~i~l~~l~~~~~~ 99 (165)
++.++++++||++.++|.++..+...
T Consensus 101 ~d~~~~~~~iG~~~i~l~~l~~~~~~ 126 (148)
T 3fdw_A 101 HGRFGRNTFLGEAEIQMDSWKLDKKL 126 (148)
T ss_dssp ECGGGCEEEEEEEEEEHHHHHHHCCS
T ss_pred CCCCcCCcEEEEEEEEcccccccCCc
Confidence 99999999999999999999876543
No 20
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.88 E-value=3e-21 Score=155.60 Aligned_cols=122 Identities=31% Similarity=0.467 Sum_probs=106.0
Q ss_pred ccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEECCeEEecccccCCCCCeEecEEEEEEeCCC-CcEEEEEEeCCCCCCCC
Q 031128 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGKQKLKTRVVKNNVNPEWNEDLTLSISDSN-LPIKLTVYDKDTFSLDD 81 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~~~~~~T~~~~~~~~P~w~e~f~f~~~~~~-~~l~i~v~d~~~~~~d~ 81 (165)
..|.|.|+|++|++|+..+ .+.+||||++.+++..++|++++++.||.|||+|.|.+.... ..|.|+|||++.+++|+
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~d 464 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPDD 464 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSCC
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCCC
Confidence 5689999999999999988 889999999999999999999999999999999999997655 45999999999999999
Q ss_pred eeEEEEEechhhhhhhcccccCCCCceEEEEEeeCCCccccccceeEEeCCcEEeeeeeeeccceeeeEEEEEEEEe
Q 031128 82 KMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLRNVEVGEVKIQLEWID 158 (165)
Q Consensus 82 ~iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~G~l~l~l~~~~ 158 (165)
+||++.+++.++..+... .+. .+.|+.+.+..+|+|++.++..-
T Consensus 465 ~lG~~~~~l~~l~~~~~~-------------------------------~~~--~~~~~~l~~~~~G~i~l~~~l~l 508 (510)
T 3jzy_A 465 FLGRTEIPVAKIRTEQES-------------------------------KGP--MTRRLLLHEVPTGEVWVRFDLQL 508 (510)
T ss_dssp EEEEEEEEHHHHHHHHHH-------------------------------HCS--CCEEEECBSSSSCEEEEEEEEEE
T ss_pred ceEEEEEEHHHhccccCC-------------------------------CCc--eeeeecCCCCCCceEEEEEEEEE
Confidence 999999999999875431 010 16789999989999999987653
No 21
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.87 E-value=4.1e-22 Score=133.25 Aligned_cols=92 Identities=24% Similarity=0.401 Sum_probs=76.6
Q ss_pred ccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEE-----CCeEEecccccCCCCCeEecEEEEEEeC----CCCcEEEEEEe
Q 031128 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKM-----GKQKLKTRVVKNNVNPEWNEDLTLSISD----SNLPIKLTVYD 73 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~-----~~~~~~T~~~~~~~~P~w~e~f~f~~~~----~~~~l~i~v~d 73 (165)
..+.|.|+|++|++|+..+ .+.+||||++.+ +...++|++++++.||.|||+|.|.+.. ....|.|+|||
T Consensus 16 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d 95 (129)
T 2bwq_A 16 VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWD 95 (129)
T ss_dssp TTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEE
Confidence 4678999999999999988 788999999998 4578999999999999999999999532 13469999999
Q ss_pred CCCCCC--CCeeEEEEEechhhhh
Q 031128 74 KDTFSL--DDKMGDAEFYITPFLE 95 (165)
Q Consensus 74 ~~~~~~--d~~iG~~~i~l~~l~~ 95 (165)
++.+++ +++||++.++|.++..
T Consensus 96 ~d~~~~~~~~~lG~~~i~l~~l~~ 119 (129)
T 2bwq_A 96 QARVREEESEFLGEILIELETALL 119 (129)
T ss_dssp C-------CEEEEEEEEEGGGCCC
T ss_pred CCcCcCcCCceeEEEEEEccccCC
Confidence 999876 9999999999998754
No 22
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.87 E-value=1.2e-22 Score=138.09 Aligned_cols=93 Identities=32% Similarity=0.506 Sum_probs=81.1
Q ss_pred cEEEEEEEEEeeCCCCCC-CCCCCcEEEEEECCe--------------EEecccccCCCCCeEecEEEEE-EeC---CCC
Q 031128 5 MGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGKQ--------------KLKTRVVKNNVNPEWNEDLTLS-ISD---SNL 65 (165)
Q Consensus 5 ~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~~~--------------~~~T~~~~~~~~P~w~e~f~f~-~~~---~~~ 65 (165)
.|.|.|+|++|++|+..+ .+.+||||++++... .++|++++++.||.|||+|.|. +.. ...
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 468999999999999988 889999999999852 4789999999999999999997 532 245
Q ss_pred cEEEEEEeCCCCCCCCeeEEEEEechhhhhhh
Q 031128 66 PIKLTVYDKDTFSLDDKMGDAEFYITPFLEAL 97 (165)
Q Consensus 66 ~l~i~v~d~~~~~~d~~iG~~~i~l~~l~~~~ 97 (165)
.|.|+|||++.++++++||++.++|.++....
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~ 128 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLD 128 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGGT
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccCC
Confidence 69999999999999999999999999886643
No 23
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.87 E-value=2.1e-22 Score=139.00 Aligned_cols=91 Identities=14% Similarity=0.156 Sum_probs=81.7
Q ss_pred ccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEECC------eEEecccccCCCCCeEecEEEEEEeCC---CCcEEEEEEe
Q 031128 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK------QKLKTRVVKNNVNPEWNEDLTLSISDS---NLPIKLTVYD 73 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~~------~~~~T~~~~~~~~P~w~e~f~f~~~~~---~~~l~i~v~d 73 (165)
..+.|.|+|++|++|+.++ .+.+||||++++.. .+++|++++++.||+|||+|.|.+... ...|.|+|||
T Consensus 41 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d 120 (155)
T 2z0u_A 41 KNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCT 120 (155)
T ss_dssp TTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEE
T ss_pred CCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEE
Confidence 4678999999999999998 88999999999964 378999999999999999999998643 3569999999
Q ss_pred CCCCCCCCeeEEEEEechhhh
Q 031128 74 KDTFSLDDKMGDAEFYITPFL 94 (165)
Q Consensus 74 ~~~~~~d~~iG~~~i~l~~l~ 94 (165)
++.++++++||++.++|.++.
T Consensus 121 ~d~~~~~d~iG~~~i~l~~l~ 141 (155)
T 2z0u_A 121 TDRSHLEECLGGAQISLAEVC 141 (155)
T ss_dssp ECTTSCEEEEEEEEEECTTSC
T ss_pred CCCCCCCcEEEEEEEEHHHcc
Confidence 999999999999999999875
No 24
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.87 E-value=7.3e-22 Score=134.19 Aligned_cols=95 Identities=26% Similarity=0.496 Sum_probs=83.5
Q ss_pred cccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEECC-----eEEecccccCCCCCeEecEEEEE-EeCC---CCcEEEEEE
Q 031128 3 NLMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK-----QKLKTRVVKNNVNPEWNEDLTLS-ISDS---NLPIKLTVY 72 (165)
Q Consensus 3 ~~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~~-----~~~~T~~~~~~~~P~w~e~f~f~-~~~~---~~~l~i~v~ 72 (165)
...+.|.|+|++|++|+..+ .+.+||||++++.. ..++|++++++.||.|||+|.|. +... ...|.|+||
T Consensus 26 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 105 (142)
T 2chd_A 26 QDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVC 105 (142)
T ss_dssp GGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEE
T ss_pred CCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEE
Confidence 35678999999999999988 78899999999974 78899999999999999999998 5332 256999999
Q ss_pred eCCCCCCCCeeEEEEEechhhhhhh
Q 031128 73 DKDTFSLDDKMGDAEFYITPFLEAL 97 (165)
Q Consensus 73 d~~~~~~d~~iG~~~i~l~~l~~~~ 97 (165)
|++.+++|++||++.+++.++..+.
T Consensus 106 d~d~~~~d~~iG~~~i~l~~l~~~~ 130 (142)
T 2chd_A 106 DEDKFGHNEFIGETRFSLKKLKANQ 130 (142)
T ss_dssp EECTTSCEEEEEEEEEEGGGCCTTC
T ss_pred ECCCCCCCcEEEEEEEEHHHcCCCC
Confidence 9999999999999999999887644
No 25
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.87 E-value=5.8e-22 Score=138.90 Aligned_cols=92 Identities=23% Similarity=0.369 Sum_probs=81.5
Q ss_pred cEEEEEEEEEeeCCCCCC--CCCCCcEEEEEECC-----eEEecccccCCCCCeEecEEEEEEeCCCCcEEEEEE-eCCC
Q 031128 5 MGLLRVHVLRGVNLAVRD--VVSSDPYVVIKMGK-----QKLKTRVVKNNVNPEWNEDLTLSISDSNLPIKLTVY-DKDT 76 (165)
Q Consensus 5 ~g~L~V~v~~a~~L~~~~--~~~~dpyv~v~~~~-----~~~~T~~~~~~~~P~w~e~f~f~~~~~~~~l~i~v~-d~~~ 76 (165)
.+.|.|+|++|++|+..+ .+.+||||++.+.. ..++|++++++.||+|||+|.|.+......|.|+|| |++.
T Consensus 29 ~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d~ 108 (171)
T 2q3x_A 29 KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGR 108 (171)
T ss_dssp TTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECST
T ss_pred CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCCC
Confidence 578999999999999987 48899999999863 378999999999999999999998665566999999 9999
Q ss_pred CCCCCeeEEEEEechhhhhh
Q 031128 77 FSLDDKMGDAEFYITPFLEA 96 (165)
Q Consensus 77 ~~~d~~iG~~~i~l~~l~~~ 96 (165)
+++|++||++.++|.++..+
T Consensus 109 ~~~d~~iG~~~i~l~~l~~~ 128 (171)
T 2q3x_A 109 MDHKCFMGVAQILLEELDLS 128 (171)
T ss_dssp TCSSEEEEEEEECGGGSCTT
T ss_pred CCCCCEEEEEEEEHHHcccC
Confidence 99999999999999988643
No 26
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.87 E-value=3.5e-21 Score=144.59 Aligned_cols=94 Identities=29% Similarity=0.415 Sum_probs=83.0
Q ss_pred cccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC---CeEEecccccCCCCCeEecEEEEEEeCC---CCcEEEEEEeCC
Q 031128 3 NLMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG---KQKLKTRVVKNNVNPEWNEDLTLSISDS---NLPIKLTVYDKD 75 (165)
Q Consensus 3 ~~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~---~~~~~T~~~~~~~~P~w~e~f~f~~~~~---~~~l~i~v~d~~ 75 (165)
...+.|.|+|++|++|+..+ .+.+||||++.++ .+.++|++++++.||.|||+|.|.+... ...|.|+|||++
T Consensus 16 ~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d 95 (284)
T 2r83_A 16 FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFD 95 (284)
T ss_dssp TTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECC
T ss_pred CCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECC
Confidence 35688999999999999988 7899999999996 3578999999999999999999998643 356999999999
Q ss_pred CCCCCCeeEEEEEechhhhhh
Q 031128 76 TFSLDDKMGDAEFYITPFLEA 96 (165)
Q Consensus 76 ~~~~d~~iG~~~i~l~~l~~~ 96 (165)
.+++|++||++.++|.++..+
T Consensus 96 ~~~~~~~lG~~~i~l~~l~~~ 116 (284)
T 2r83_A 96 RFSKHDIIGEFKVPMNTVDFG 116 (284)
T ss_dssp SSSCCCEEEEEEEEGGGCCCS
T ss_pred CCCCCceeEEEEEcchhcccC
Confidence 999999999999999987653
No 27
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.86 E-value=3.5e-22 Score=135.47 Aligned_cols=92 Identities=24% Similarity=0.401 Sum_probs=80.3
Q ss_pred ccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEE-----CCeEEecccccCCCCCeEecEEEEEEeCC----CCcEEEEEEe
Q 031128 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKM-----GKQKLKTRVVKNNVNPEWNEDLTLSISDS----NLPIKLTVYD 73 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~-----~~~~~~T~~~~~~~~P~w~e~f~f~~~~~----~~~l~i~v~d 73 (165)
..+.|.|+|++|++|+..+ .+.+||||++.+ ....++|++++++.||.|||+|.|.+... ...|.|+|||
T Consensus 19 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d 98 (141)
T 1v27_A 19 VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWD 98 (141)
T ss_dssp TTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEE
T ss_pred CCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEE
Confidence 4578999999999999988 788999999998 35688999999999999999999995322 2569999999
Q ss_pred CCCCCC--CCeeEEEEEechhhhh
Q 031128 74 KDTFSL--DDKMGDAEFYITPFLE 95 (165)
Q Consensus 74 ~~~~~~--d~~iG~~~i~l~~l~~ 95 (165)
++.+++ +++||++.++|.++..
T Consensus 99 ~d~~~~~~~~~lG~~~i~l~~l~~ 122 (141)
T 1v27_A 99 QARVREEESEFLGEILIELETALL 122 (141)
T ss_dssp BCSSSSCCBCCCEEEEEEGGGCCC
T ss_pred CCCCcCCCCceEEEEEEEccccCC
Confidence 999986 9999999999988754
No 28
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.86 E-value=2.2e-21 Score=131.22 Aligned_cols=93 Identities=27% Similarity=0.458 Sum_probs=81.8
Q ss_pred ccEEEEEEEEEeeCCCCCC-C-CCCCcEEEEEEC---CeEEecccccCCCCCeEecEEEEE-EeCC---CCcEEEEEEeC
Q 031128 4 LMGLLRVHVLRGVNLAVRD-V-VSSDPYVVIKMG---KQKLKTRVVKNNVNPEWNEDLTLS-ISDS---NLPIKLTVYDK 74 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~-~-~~~dpyv~v~~~---~~~~~T~~~~~~~~P~w~e~f~f~-~~~~---~~~l~i~v~d~ 74 (165)
..+.|.|+|++|++|+..+ . +.+||||++.+. .+.++|++++++.||.|||+|.|. +... ...|.|+|||+
T Consensus 20 ~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~ 99 (138)
T 1ugk_A 20 ERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSF 99 (138)
T ss_dssp GGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEEC
Confidence 5678999999999999988 4 789999999996 478999999999999999999996 6543 24699999999
Q ss_pred CCCCCCCeeEEEEEechhhhhh
Q 031128 75 DTFSLDDKMGDAEFYITPFLEA 96 (165)
Q Consensus 75 ~~~~~d~~iG~~~i~l~~l~~~ 96 (165)
+.+++|++||++.++|.++..+
T Consensus 100 d~~~~~~~lG~~~i~l~~l~~~ 121 (138)
T 1ugk_A 100 DRFSRDDIIGEVLIPLSGIELS 121 (138)
T ss_dssp CSSCCCCCCEEEEEECTTCCCT
T ss_pred CCCCCCcEEEEEEEehhHccCC
Confidence 9999999999999999988664
No 29
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.86 E-value=1.4e-21 Score=136.27 Aligned_cols=92 Identities=33% Similarity=0.441 Sum_probs=82.5
Q ss_pred ccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEECC-----eEEecccccCCCCCeEecEEEEEEeCC---CCcEEEEEEeC
Q 031128 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK-----QKLKTRVVKNNVNPEWNEDLTLSISDS---NLPIKLTVYDK 74 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~~-----~~~~T~~~~~~~~P~w~e~f~f~~~~~---~~~l~i~v~d~ 74 (165)
..+.|.|+|++|++|+..+ .+.+||||++++.. ..++|++++++.||.|||+|.|.+... ...|.|+|||+
T Consensus 35 ~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 114 (166)
T 2cm5_A 35 QQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDY 114 (166)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEEC
Confidence 4678999999999999988 78899999999975 688999999999999999999998653 34699999999
Q ss_pred CCCCCCCeeEEEEEechhhhh
Q 031128 75 DTFSLDDKMGDAEFYITPFLE 95 (165)
Q Consensus 75 ~~~~~d~~iG~~~i~l~~l~~ 95 (165)
+.++++++||++.+++.++..
T Consensus 115 d~~~~~~~iG~~~i~l~~~~~ 135 (166)
T 2cm5_A 115 DIGKSNDYIGGCQLGISAKGE 135 (166)
T ss_dssp CSSSCCEEEEEEEEETTCCHH
T ss_pred CCCCCCcEEEeEEEecccCCc
Confidence 999999999999999998654
No 30
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.86 E-value=2.4e-21 Score=131.18 Aligned_cols=89 Identities=21% Similarity=0.266 Sum_probs=76.9
Q ss_pred ccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC---C-eEEecccccCCCCCeEecEEEEEEeCCC---CcEEEEEEeCC
Q 031128 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG---K-QKLKTRVVKNNVNPEWNEDLTLSISDSN---LPIKLTVYDKD 75 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~---~-~~~~T~~~~~~~~P~w~e~f~f~~~~~~---~~l~i~v~d~~ 75 (165)
..+.|.|+|++|++ .+ .+.+||||++.+. + ..++|++++++.||.|||+|.|.+...+ ..|.|+|||++
T Consensus 24 ~~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d 100 (138)
T 1wfm_A 24 QKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCD 100 (138)
T ss_dssp TTTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECC
T ss_pred CCCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECC
Confidence 46789999999993 45 7789999999983 2 3679999999999999999999986542 45999999999
Q ss_pred CCCCCCeeEEEEEechhhhh
Q 031128 76 TFSLDDKMGDAEFYITPFLE 95 (165)
Q Consensus 76 ~~~~d~~iG~~~i~l~~l~~ 95 (165)
.+++|++||++.++|.++..
T Consensus 101 ~~~~dd~lG~~~i~l~~l~~ 120 (138)
T 1wfm_A 101 RFSRHSVAGELRLGLDGTSV 120 (138)
T ss_dssp SSCTTSCSEEEEEESSSSSS
T ss_pred CCCCCcEEEEEEEEcccccC
Confidence 99999999999999998753
No 31
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.86 E-value=1.3e-21 Score=132.11 Aligned_cols=95 Identities=29% Similarity=0.370 Sum_probs=83.2
Q ss_pred cccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEECC-----eEEecccccCCCCCeEecEEEEEEeCCC---CcEEEEEEe
Q 031128 3 NLMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK-----QKLKTRVVKNNVNPEWNEDLTLSISDSN---LPIKLTVYD 73 (165)
Q Consensus 3 ~~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~~-----~~~~T~~~~~~~~P~w~e~f~f~~~~~~---~~l~i~v~d 73 (165)
...+.|.|+|++|++|+..+ .+.+||||++++.. .+++|++++++.||.|||+|.|.+.... ..|.|+|||
T Consensus 13 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d 92 (138)
T 3n5a_A 13 PSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMD 92 (138)
T ss_dssp TTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEE
T ss_pred CCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEE
Confidence 35688999999999999988 77899999999873 4789999999999999999999986544 459999999
Q ss_pred CCCCCCCCeeEEEEEechhhhhhh
Q 031128 74 KDTFSLDDKMGDAEFYITPFLEAL 97 (165)
Q Consensus 74 ~~~~~~d~~iG~~~i~l~~l~~~~ 97 (165)
++.+++|++||++.+++.++..+.
T Consensus 93 ~~~~~~~~~lG~~~i~l~~~~~~~ 116 (138)
T 3n5a_A 93 KDKLSRNDVIGKIYLSWKSGPGEV 116 (138)
T ss_dssp CCSSSCCEEEEEEEESSSSCHHHH
T ss_pred CCCCCCCcEEEEEEEccccCChHH
Confidence 999999999999999999765543
No 32
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.85 E-value=6.2e-21 Score=131.99 Aligned_cols=92 Identities=30% Similarity=0.392 Sum_probs=81.1
Q ss_pred ccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEECC-----eEEecccccCCCCCeEecEEEEEEeCCC---CcEEEEEEeC
Q 031128 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK-----QKLKTRVVKNNVNPEWNEDLTLSISDSN---LPIKLTVYDK 74 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~~-----~~~~T~~~~~~~~P~w~e~f~f~~~~~~---~~l~i~v~d~ 74 (165)
..+.|.|+|++|++|+..+ .+.+||||++++.. ..++|++++++.||.|||+|.|.+.... ..|.|+|||+
T Consensus 23 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 102 (159)
T 1tjx_A 23 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDY 102 (159)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEEC
T ss_pred CCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEEC
Confidence 5678999999999999988 78899999999862 4789999999999999999999986542 4599999999
Q ss_pred CCCCCCCeeEEEEEechhhhh
Q 031128 75 DTFSLDDKMGDAEFYITPFLE 95 (165)
Q Consensus 75 ~~~~~d~~iG~~~i~l~~l~~ 95 (165)
+.+++|++||++.+++..+..
T Consensus 103 d~~~~~~~iG~~~i~l~~~~~ 123 (159)
T 1tjx_A 103 DKIGKNDAIGKVFVGYNSTGA 123 (159)
T ss_dssp CSSSCCEEEEEEEEETTCCHH
T ss_pred CCCCCCceEEEEEECCCCCCc
Confidence 999999999999999987543
No 33
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=3.7e-21 Score=130.71 Aligned_cols=93 Identities=24% Similarity=0.228 Sum_probs=79.5
Q ss_pred ccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC-----CeEEecccccCCCCCeEecEEEEEEeCC---CCcEEEEEEeC
Q 031128 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG-----KQKLKTRVVKNNVNPEWNEDLTLSISDS---NLPIKLTVYDK 74 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~-----~~~~~T~~~~~~~~P~w~e~f~f~~~~~---~~~l~i~v~d~ 74 (165)
..+.|.|+|++|++|+..+ .+ +||||++++. ...++|++++++.||.|||+|.|.+... ...|.|+|||+
T Consensus 22 ~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 100 (142)
T 2dmg_A 22 QRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNS 100 (142)
T ss_dssp TTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEEC
Confidence 4678999999999999988 77 9999999984 2678999999999999999999998542 24699999999
Q ss_pred CCCCC--CCeeEEEEEechhhhhhh
Q 031128 75 DTFSL--DDKMGDAEFYITPFLEAL 97 (165)
Q Consensus 75 ~~~~~--d~~iG~~~i~l~~l~~~~ 97 (165)
+.+++ +++||++.++|.++....
T Consensus 101 d~~~~~~~~~iG~~~i~l~~~~~~~ 125 (142)
T 2dmg_A 101 GGFLSKDKGLLGKVLVALASEELAK 125 (142)
T ss_dssp CCSSCCSCCCCEEEEEECCCSTTTT
T ss_pred CCccccCCcEEEEEEEecccccccc
Confidence 98764 579999999998876543
No 34
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=2.3e-21 Score=132.47 Aligned_cols=95 Identities=26% Similarity=0.283 Sum_probs=81.2
Q ss_pred cccEEEEEEEEEeeCCCCC-C-------CCCCCcEEEEEEC---CeEEecccccCCCCCeEecEEEEEEeCC---CCcEE
Q 031128 3 NLMGLLRVHVLRGVNLAVR-D-------VVSSDPYVVIKMG---KQKLKTRVVKNNVNPEWNEDLTLSISDS---NLPIK 68 (165)
Q Consensus 3 ~~~g~L~V~v~~a~~L~~~-~-------~~~~dpyv~v~~~---~~~~~T~~~~~~~~P~w~e~f~f~~~~~---~~~l~ 68 (165)
...+.|.|+|++|++|+.. + .+.+||||++.+. .+.++|++++++.||.|||+|.|.+... ...|.
T Consensus 23 ~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 102 (147)
T 2enp_A 23 LLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLL 102 (147)
T ss_dssp TTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEE
T ss_pred CCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEE
Confidence 3567899999999999984 3 3579999999986 4678999999999999999999998642 24699
Q ss_pred EEEEeCCCCCCCCeeEEEEEechhhhhhh
Q 031128 69 LTVYDKDTFSLDDKMGDAEFYITPFLEAL 97 (165)
Q Consensus 69 i~v~d~~~~~~d~~iG~~~i~l~~l~~~~ 97 (165)
|+|||++.++++++||++.++|.++....
T Consensus 103 ~~V~d~d~~~~~~~iG~~~i~l~~l~~~~ 131 (147)
T 2enp_A 103 LTVVDFDKFSRHCVIGKVSVPLCEVDLVK 131 (147)
T ss_dssp EEEECCSTTCCSCCCEEEEEETTTSCTTT
T ss_pred EEEEECCCCcCCcEEEEEEEechhcCCCC
Confidence 99999999999999999999999886543
No 35
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.85 E-value=2.7e-20 Score=150.40 Aligned_cols=87 Identities=28% Similarity=0.397 Sum_probs=80.3
Q ss_pred ccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEECCeEEecccccCCCCCeEecEEEEEEeC--CCCcEEEEEEeCCCCCCC
Q 031128 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGKQKLKTRVVKNNVNPEWNEDLTLSISD--SNLPIKLTVYDKDTFSLD 80 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~~~~~~T~~~~~~~~P~w~e~f~f~~~~--~~~~l~i~v~d~~~~~~d 80 (165)
..|.|.|+|++|++|+. + .+.+||||++.++++.++|++++++.||+|||+|.|.+.. ....|.|+|||+|..++|
T Consensus 392 ~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~d 470 (540)
T 3nsj_A 392 GLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDD 470 (540)
T ss_dssp TEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCC
T ss_pred cccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCC
Confidence 47899999999999998 7 8899999999999999999999999999999999998643 456799999999999899
Q ss_pred CeeEEEEEech
Q 031128 81 DKMGDAEFYIT 91 (165)
Q Consensus 81 ~~iG~~~i~l~ 91 (165)
++||++.++|.
T Consensus 471 D~LG~~~~~L~ 481 (540)
T 3nsj_A 471 DLLGSCDRSPH 481 (540)
T ss_dssp EEEEEEEECCC
T ss_pred CEEEEEEEEee
Confidence 99999999996
No 36
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.83 E-value=2.7e-19 Score=119.81 Aligned_cols=120 Identities=13% Similarity=0.233 Sum_probs=97.5
Q ss_pred cEEEEEEEEEeeCCCCCCCCCCCcEEEEEECCeEEeccccc-CCCCCeEecEEEEEEeCC---CCcEEEEEEeCCCCCCC
Q 031128 5 MGLLRVHVLRGVNLAVRDVVSSDPYVVIKMGKQKLKTRVVK-NNVNPEWNEDLTLSISDS---NLPIKLTVYDKDTFSLD 80 (165)
Q Consensus 5 ~g~L~V~v~~a~~L~~~~~~~~dpyv~v~~~~~~~~T~~~~-~~~~P~w~e~f~f~~~~~---~~~l~i~v~d~~~~~~d 80 (165)
.--|+|+|.+|.+|+ +.+|||+++.+.+.+++|++++ ++.||.|||.|.|++..+ ++.|.+.|+|++.++++
T Consensus 20 ~msL~V~l~~a~~Lp----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~n 95 (144)
T 3l9b_A 20 HMALIVHLKTVSELR----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFSN 95 (144)
T ss_dssp CEEEEEEEEEEESCC----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSCC
T ss_pred cEEEEEEEEEecCCC----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccCC
Confidence 346899999999998 4689999999999999999998 589999999999999753 34599999999999999
Q ss_pred CeeEEEEEechhhhhhhcccccCCCCceEEEEEeeCCCccccccceeEEeCCcEEeeeeeeeccc-eeeeEEEEEEEEeC
Q 031128 81 DKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLRNV-EVGEVKIQLEWIDI 159 (165)
Q Consensus 81 ~~iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~-~~G~l~l~l~~~~~ 159 (165)
++||++.++|.++.......+ .+.-++.+.. ..+.|.+.+.|.|.
T Consensus 96 rlIG~~~i~Lq~lv~~~~l~l----------------------------------~~~LvD~n~~~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 96 KLIGTFRMVLQKVVEENRVEV----------------------------------SDTLIDDNNAIIKTSLSMEVRYQAA 141 (144)
T ss_dssp EEEEEEEEESHHHHHHSEEEE----------------------------------EEEEECTTSCEEEEEEEEEEEEEET
T ss_pred CEEEEEEEEhHHhccCCeEEE----------------------------------eecccCCCCCccccEEEEEEEecCC
Confidence 999999999999998664310 0111122222 25899999999998
Q ss_pred CCC
Q 031128 160 PGS 162 (165)
Q Consensus 160 ~~~ 162 (165)
+++
T Consensus 142 ~g~ 144 (144)
T 3l9b_A 142 DGT 144 (144)
T ss_dssp TCC
T ss_pred CCC
Confidence 864
No 37
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.83 E-value=4e-20 Score=127.07 Aligned_cols=89 Identities=29% Similarity=0.346 Sum_probs=75.3
Q ss_pred ccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC--Ce---EEecccccCCCCCeEecEEEEEEeCCC---CcEEEEEEeC
Q 031128 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG--KQ---KLKTRVVKNNVNPEWNEDLTLSISDSN---LPIKLTVYDK 74 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~--~~---~~~T~~~~~~~~P~w~e~f~f~~~~~~---~~l~i~v~d~ 74 (165)
..+.|.|+|++|++|+..+ .+.+||||++.+. +. +++|++++++.||.|||+|.|.+.... ..|.|+|||+
T Consensus 28 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~ 107 (153)
T 1w15_A 28 TTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDS 107 (153)
T ss_dssp TTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeC
Confidence 4678999999999999988 7889999999983 33 679999999999999999999987643 3599999999
Q ss_pred CCCCCCCeeEEEEEechh
Q 031128 75 DTFSLDDKMGDAEFYITP 92 (165)
Q Consensus 75 ~~~~~d~~iG~~~i~l~~ 92 (165)
+.++++++||++.+++.+
T Consensus 108 d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 108 ERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp CTTSCCEEEEEEEESTTC
T ss_pred CCCCCCcEEEEEEECCCC
Confidence 999999999999999987
No 38
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.83 E-value=8e-20 Score=138.20 Aligned_cols=91 Identities=31% Similarity=0.492 Sum_probs=79.8
Q ss_pred cccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEE---CCeEEecccccCCCCCeEecEEEEEEeCC---CCcEEEEEEeCC
Q 031128 3 NLMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKM---GKQKLKTRVVKNNVNPEWNEDLTLSISDS---NLPIKLTVYDKD 75 (165)
Q Consensus 3 ~~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~---~~~~~~T~~~~~~~~P~w~e~f~f~~~~~---~~~l~i~v~d~~ 75 (165)
...+.|.|+|++|++|+..+ .+.+||||++++ +.+.++|++++++.||.|||+|.|.+... ...|.|+|||++
T Consensus 17 ~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d 96 (296)
T 1dqv_A 17 YGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFD 96 (296)
T ss_dssp SSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECC
T ss_pred CCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcC
Confidence 45789999999999999988 888999999999 46788999999999999999999998643 246999999999
Q ss_pred CCCCCCeeEEEEEe-chhh
Q 031128 76 TFSLDDKMGDAEFY-ITPF 93 (165)
Q Consensus 76 ~~~~d~~iG~~~i~-l~~l 93 (165)
.+++|++||++.++ +.++
T Consensus 97 ~~~~~~~iG~~~i~~l~~~ 115 (296)
T 1dqv_A 97 RFSRHDLIGQVVLDNLLEL 115 (296)
T ss_dssp SSSCCCEEEEEECCCTTGG
T ss_pred CCCCCceEEEEEecccccc
Confidence 99999999999996 4443
No 39
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.82 E-value=8.1e-20 Score=122.68 Aligned_cols=87 Identities=22% Similarity=0.381 Sum_probs=73.6
Q ss_pred ccEEEEEEEEEeeCCCCCCCCCCCcEEEEEECCeEEeccccc-CCCCCeEecEEEEEEeCCCCcEEEEEEeCCCCCCCCe
Q 031128 4 LMGLLRVHVLRGVNLAVRDVVSSDPYVVIKMGKQKLKTRVVK-NNVNPEWNEDLTLSISDSNLPIKLTVYDKDTFSLDDK 82 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~~~~~~~~T~~~~-~~~~P~w~e~f~f~~~~~~~~l~i~v~d~~~~~~d~~ 82 (165)
+++.|.|+|++|++++. .+.+||||+++ . +..+|++++ ++.||.|||+|.|.+......|.|+|||++ +++|++
T Consensus 3 ~~~~L~V~V~~A~~l~~--~g~~DPYv~v~-~-~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~ 77 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA--QEKFNTYVTLK-V-QNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDTM 77 (131)
T ss_dssp CCEEEEEEEEEEECSSC--GGGCEEEEEEE-E-TTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SSCEEE
T ss_pred cceEEEEEEEEeECCCC--CCCcCeEEEEE-e-cCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CCCCCe
Confidence 56899999999998853 56789999999 3 334555554 689999999999999876677999999999 889999
Q ss_pred eEEEEEechhhhh
Q 031128 83 MGDAEFYITPFLE 95 (165)
Q Consensus 83 iG~~~i~l~~l~~ 95 (165)
||++.++|.++..
T Consensus 78 iG~~~i~l~~l~~ 90 (131)
T 2cjt_A 78 VGTVWIPLRTIRQ 90 (131)
T ss_dssp EEEEEEEGGGSCB
T ss_pred EEEEEEEHHHhhh
Confidence 9999999998765
No 40
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.79 E-value=2.4e-19 Score=125.07 Aligned_cols=88 Identities=19% Similarity=0.373 Sum_probs=74.8
Q ss_pred cccEEEEEEEEEeeCCCCCCCCCCCcEEEEEECCeEEeccccc-CCCCCeEecEEEEEEeCCCCcEEEEEEeCCCCCCCC
Q 031128 3 NLMGLLRVHVLRGVNLAVRDVVSSDPYVVIKMGKQKLKTRVVK-NNVNPEWNEDLTLSISDSNLPIKLTVYDKDTFSLDD 81 (165)
Q Consensus 3 ~~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~~~~~~~~T~~~~-~~~~P~w~e~f~f~~~~~~~~l~i~v~d~~~~~~d~ 81 (165)
.+++.|.|+|++|++++ ..+.+||||+++ .+..+|++++ ++.||.|||+|.|.+......|.|+|||++ +++|+
T Consensus 11 g~~~~L~V~V~~A~~l~--~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd 85 (167)
T 2cjs_A 11 GILSLLCVGVKKAKFDG--AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDT 85 (167)
T ss_dssp SCCCEEEEEEEEEECSS--CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SSCCE
T ss_pred CceEEEEEEEEEEECCC--CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CCCCc
Confidence 35789999999999884 256889999999 3345666665 589999999999999876677999999999 88999
Q ss_pred eeEEEEEechhhhh
Q 031128 82 KMGDAEFYITPFLE 95 (165)
Q Consensus 82 ~iG~~~i~l~~l~~ 95 (165)
+||++.++|.++..
T Consensus 86 ~iG~~~i~L~~l~~ 99 (167)
T 2cjs_A 86 MVGTVWIPLRTIRQ 99 (167)
T ss_dssp EEEEEEEEGGGSCB
T ss_pred eEEEEEEEHHHhcc
Confidence 99999999998765
No 41
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.77 E-value=8.4e-18 Score=138.29 Aligned_cols=92 Identities=23% Similarity=0.400 Sum_probs=82.2
Q ss_pred ccEEEEEEEEEeeCCCCCC---CCCCCcEEEEEECC-----eEEecccccCC-CCCeEecEEEEEEeCCC-CcEEEEEEe
Q 031128 4 LMGLLRVHVLRGVNLAVRD---VVSSDPYVVIKMGK-----QKLKTRVVKNN-VNPEWNEDLTLSISDSN-LPIKLTVYD 73 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~---~~~~dpyv~v~~~~-----~~~~T~~~~~~-~~P~w~e~f~f~~~~~~-~~l~i~v~d 73 (165)
..+.|.|+|++|++|+..+ .+.+||||+|.+.+ .+++|++++++ .||+|||+|.|.+..+. ..|.|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 4689999999999999877 57899999999843 68899999997 99999999999998665 459999999
Q ss_pred CCCCCCCCeeEEEEEechhhhh
Q 031128 74 KDTFSLDDKMGDAEFYITPFLE 95 (165)
Q Consensus 74 ~~~~~~d~~iG~~~i~l~~l~~ 95 (165)
++.++++++||++.++|..+..
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~ 596 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQ 596 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCC
T ss_pred cCCCCCCceeEEEEEEHHHcCC
Confidence 9999999999999999988765
No 42
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.76 E-value=3.7e-18 Score=128.06 Aligned_cols=92 Identities=30% Similarity=0.383 Sum_probs=80.6
Q ss_pred ccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC--C---eEEecccccCCCCCeEecEEEEEEeCCC---CcEEEEEEeC
Q 031128 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG--K---QKLKTRVVKNNVNPEWNEDLTLSISDSN---LPIKLTVYDK 74 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~--~---~~~~T~~~~~~~~P~w~e~f~f~~~~~~---~~l~i~v~d~ 74 (165)
..+.|.|+|++|++|+..+ .+.+||||++.+. + .+++|++++++.||.|||.|.|.+.... ..|.|+|||+
T Consensus 148 ~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 227 (284)
T 2r83_A 148 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDY 227 (284)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEEC
T ss_pred cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeC
Confidence 3578999999999999988 7889999999984 2 4679999999999999999999987553 3499999999
Q ss_pred CCCCCCCeeEEEEEechhhhh
Q 031128 75 DTFSLDDKMGDAEFYITPFLE 95 (165)
Q Consensus 75 ~~~~~d~~iG~~~i~l~~l~~ 95 (165)
+.++++++||++.+++..+..
T Consensus 228 d~~~~~~~iG~~~i~l~~~~~ 248 (284)
T 2r83_A 228 DKIGKNDAIGKVFVGYNSTGA 248 (284)
T ss_dssp CSSSCCCEEEEEEEETTCCHH
T ss_pred CCCCCCcEEEEEEECCCCCCc
Confidence 999999999999999987554
No 43
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.76 E-value=2.6e-18 Score=142.97 Aligned_cols=94 Identities=24% Similarity=0.470 Sum_probs=84.1
Q ss_pred cccEEEEEEEEEeeCCCC---CC-CCCCCcEEEEEEC---CeEEecccccCCCCCeEecEEEEEEeCC-CCcEEEEEEeC
Q 031128 3 NLMGLLRVHVLRGVNLAV---RD-VVSSDPYVVIKMG---KQKLKTRVVKNNVNPEWNEDLTLSISDS-NLPIKLTVYDK 74 (165)
Q Consensus 3 ~~~g~L~V~v~~a~~L~~---~~-~~~~dpyv~v~~~---~~~~~T~~~~~~~~P~w~e~f~f~~~~~-~~~l~i~v~d~ 74 (165)
.+.+.|.|+|++|++|+. .+ .+.+||||++.+. ..+++|++++++.||+|||+|.|.+... ...|.|+|||+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 367899999999999998 66 7889999999998 4688999999999999999999999864 35699999999
Q ss_pred CCCCCCCeeEEEEEechhhhhhh
Q 031128 75 DTFSLDDKMGDAEFYITPFLEAL 97 (165)
Q Consensus 75 ~~~~~d~~iG~~~i~l~~l~~~~ 97 (165)
+.++ |++||++.++|.++..+.
T Consensus 95 D~~~-ddfIG~v~I~L~~L~~g~ 116 (749)
T 1cjy_A 95 NYVM-DETLGTATFTVSSMKVGE 116 (749)
T ss_dssp CSSS-CEEEEEECCBSTTSCTTC
T ss_pred CCCC-CceeEEEEEEHHHcCCCC
Confidence 9998 999999999999886544
No 44
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.72 E-value=5.4e-19 Score=141.76 Aligned_cols=90 Identities=11% Similarity=0.189 Sum_probs=9.5
Q ss_pred ccEEEEEEEEEeeCCCCCCCCCCCcEEEEEECCe-EEecccccCC---CCCeEecEEEEEEeCCCCcEEEEEEeC-C---
Q 031128 4 LMGLLRVHVLRGVNLAVRDVVSSDPYVVIKMGKQ-KLKTRVVKNN---VNPEWNEDLTLSISDSNLPIKLTVYDK-D--- 75 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~~~~~-~~~T~~~~~~---~~P~w~e~f~f~~~~~~~~l~i~v~d~-~--- 75 (165)
..+.|.|+|++|++|++++ ||||++.++++ ..||++++++ .||.|||+|.|.+......|.|+|||. +
T Consensus 9 ~~~~L~V~VieAk~L~~~d----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~~~ 84 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDKKR 84 (483)
T ss_dssp EEECC-------------------------------------------------CCEECC--------------------
T ss_pred eccEEEEEEEEcCCcCCCC----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCccc
Confidence 4678999999999998876 99999999875 5699999998 999999999999755556799999994 4
Q ss_pred CCCCCCeeEEEEEechhhhhhh
Q 031128 76 TFSLDDKMGDAEFYITPFLEAL 97 (165)
Q Consensus 76 ~~~~d~~iG~~~i~l~~l~~~~ 97 (165)
..++|++||.+.|++.++..+.
T Consensus 85 ~~~~d~~lG~v~i~l~~l~~~~ 106 (483)
T 3bxj_A 85 KKDKAGYVGLVTVPVATLAGRH 106 (483)
T ss_dssp ----------------------
T ss_pred cCCCCceEEEEEEEHHHhcCCC
Confidence 3678999999999999887643
No 45
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.68 E-value=1.6e-17 Score=125.58 Aligned_cols=92 Identities=28% Similarity=0.411 Sum_probs=81.2
Q ss_pred ccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC--C---eEEecccccCCCCCeEecEEEEEEeCCC---CcEEEEEEeC
Q 031128 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG--K---QKLKTRVVKNNVNPEWNEDLTLSISDSN---LPIKLTVYDK 74 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~--~---~~~~T~~~~~~~~P~w~e~f~f~~~~~~---~~l~i~v~d~ 74 (165)
..|.|.|+|++|++|+..+ .+.+||||++++. + .+++|++++++.||.|||.|.|.+.... ..|.|+|||+
T Consensus 150 ~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 229 (296)
T 1dqv_A 150 TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDY 229 (296)
T ss_dssp TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEEC
T ss_pred ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeC
Confidence 4578999999999999988 7889999999986 2 5789999999999999999999986542 3599999999
Q ss_pred CCCCCCCeeEEEEEechhhhh
Q 031128 75 DTFSLDDKMGDAEFYITPFLE 95 (165)
Q Consensus 75 ~~~~~d~~iG~~~i~l~~l~~ 95 (165)
+.++++++||.+.+++..+..
T Consensus 230 d~~~~~~~iG~~~i~l~~~~~ 250 (296)
T 1dqv_A 230 DCIGHNEVIGVCRVGPEAADP 250 (296)
T ss_dssp CSSSCCEEEEECCCSSCTTCH
T ss_pred CCCCCCceEEEEEECCccCCc
Confidence 999999999999999987644
No 46
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.62 E-value=1e-15 Score=127.30 Aligned_cols=92 Identities=35% Similarity=0.529 Sum_probs=82.3
Q ss_pred cEEEEEEEEEeeCCCCCC-CCCCCcEEEEEE-----CCeEEecccccCCCCCeEecEEEEEEeCCC--CcEEEEEEeCCC
Q 031128 5 MGLLRVHVLRGVNLAVRD-VVSSDPYVVIKM-----GKQKLKTRVVKNNVNPEWNEDLTLSISDSN--LPIKLTVYDKDT 76 (165)
Q Consensus 5 ~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~-----~~~~~~T~~~~~~~~P~w~e~f~f~~~~~~--~~l~i~v~d~~~ 76 (165)
.+.|.|++++|++|.+++ .+.+||||++.+ ...+++|++++++.||.|||.|.|.+...+ ..|.++|||++.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 467899999999999998 889999999998 346789999999999999999999986543 449999999999
Q ss_pred CCCCCeeEEEEEechhhhhh
Q 031128 77 FSLDDKMGDAEFYITPFLEA 96 (165)
Q Consensus 77 ~~~d~~iG~~~i~l~~l~~~ 96 (165)
+++|++||.+.+++.++...
T Consensus 251 ~~~dd~iG~~~i~l~~l~~~ 270 (674)
T 3pfq_A 251 TSRNDFMGSLSFGISELQKA 270 (674)
T ss_dssp SSCCEECCBCCCBTTHHHHC
T ss_pred ccccccccccccchhhhccC
Confidence 99999999999999998764
No 47
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.56 E-value=5.6e-14 Score=118.09 Aligned_cols=86 Identities=16% Similarity=0.394 Sum_probs=72.7
Q ss_pred cEEEEEEEEEeeCCCCCCCCCCCcEEEEEECC-------eEEecccccC-CCCCeEecE-EEEE-EeCCCC-cEEEEEEe
Q 031128 5 MGLLRVHVLRGVNLAVRDVVSSDPYVVIKMGK-------QKLKTRVVKN-NVNPEWNED-LTLS-ISDSNL-PIKLTVYD 73 (165)
Q Consensus 5 ~g~L~V~v~~a~~L~~~~~~~~dpyv~v~~~~-------~~~~T~~~~~-~~~P~w~e~-f~f~-~~~~~~-~l~i~v~d 73 (165)
.+.|.|+|++|++|+.. ..||||+|.+.+ .+++|+++++ +.||+|||+ |.|. +..++. .|.|+|||
T Consensus 649 ~~~L~V~Visaq~L~~~---~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D 725 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK---QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSE 725 (816)
T ss_dssp CEEEEEEEEEEECCCSS---CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC---CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEe
Confidence 47899999999999864 589999999864 5789999986 599999998 9998 765553 48999999
Q ss_pred CCCCCCCCeeEEEEEechhhhhhh
Q 031128 74 KDTFSLDDKMGDAEFYITPFLEAL 97 (165)
Q Consensus 74 ~~~~~~d~~iG~~~i~l~~l~~~~ 97 (165)
++ +++||++.++|+.+..+.
T Consensus 726 ~d----ddfiG~~~ipL~~L~~Gy 745 (816)
T 3qr0_A 726 EN----GKFIGHRVMPLDGIKPGY 745 (816)
T ss_dssp TT----SCEEEEEEEESTTCCCEE
T ss_pred cC----CCeeeEEEEEHHHcCCcc
Confidence 84 799999999998877643
No 48
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.54 E-value=4.5e-14 Score=119.32 Aligned_cols=86 Identities=22% Similarity=0.421 Sum_probs=71.4
Q ss_pred cEEEEEEEEEeeCCCCCCCCCCCcEEEEEECC------eEEecccccCC-CCCeEec-EEEEE-EeCCC-CcEEEEEEeC
Q 031128 5 MGLLRVHVLRGVNLAVRDVVSSDPYVVIKMGK------QKLKTRVVKNN-VNPEWNE-DLTLS-ISDSN-LPIKLTVYDK 74 (165)
Q Consensus 5 ~g~L~V~v~~a~~L~~~~~~~~dpyv~v~~~~------~~~~T~~~~~~-~~P~w~e-~f~f~-~~~~~-~~l~i~v~d~ 74 (165)
...|.|+|++|++|+.. .+||||+|.+.+ .+++|++++++ .||+||| .|.|. +..++ ..|.|+|||+
T Consensus 724 ~~~L~V~Visaq~L~~~---~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~ 800 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR---KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEE 800 (885)
T ss_dssp CEEEEEEEEEEESCCSS---CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred ceEEEEEEEEeccCccc---CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcC
Confidence 35899999999999864 589999999863 35799999864 9999999 69998 65554 3499999998
Q ss_pred CCCCCCCeeEEEEEechhhhhhh
Q 031128 75 DTFSLDDKMGDAEFYITPFLEAL 97 (165)
Q Consensus 75 ~~~~~d~~iG~~~i~l~~l~~~~ 97 (165)
+ +++||++.++|..+..+.
T Consensus 801 d----ddfiG~~~lpL~~L~~Gy 819 (885)
T 3ohm_B 801 G----GKFVGHRILPVSAIRSGY 819 (885)
T ss_dssp T----TEEEEEEEEETTTCCCEE
T ss_pred C----ccEEeeEEEEHHHcCCCc
Confidence 6 789999999998876643
No 49
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.50 E-value=1.5e-13 Score=115.69 Aligned_cols=86 Identities=20% Similarity=0.385 Sum_probs=71.3
Q ss_pred ccEEEEEEEEEeeCCCCCCCCCCCcEEEEEECC------eEEecc-cccC-CCCCeEec-EEEE-EEeCCCC-cEEEEEE
Q 031128 4 LMGLLRVHVLRGVNLAVRDVVSSDPYVVIKMGK------QKLKTR-VVKN-NVNPEWNE-DLTL-SISDSNL-PIKLTVY 72 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~~~~------~~~~T~-~~~~-~~~P~w~e-~f~f-~~~~~~~-~l~i~v~ 72 (165)
..+.|.|+|++|++|+. +.+||||+|.+.+ ++++|+ ++++ +.||+||| .|.| .+..++. .|.|+||
T Consensus 676 ~~~~L~V~Visa~~L~~---~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~ 752 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE---RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVM 752 (799)
T ss_dssp TCEEEEEEEEEEESCCS---SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEE
T ss_pred eeeeEEEEEEeccccCc---cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEE
Confidence 36799999999999985 3589999999842 367999 8875 59999999 6999 7865553 4899999
Q ss_pred eCCCCCCCCeeEEEEEechhhhhh
Q 031128 73 DKDTFSLDDKMGDAEFYITPFLEA 96 (165)
Q Consensus 73 d~~~~~~d~~iG~~~i~l~~l~~~ 96 (165)
|++ +++||++.++|+.+..+
T Consensus 753 D~d----~d~iG~~~ipl~~L~~G 772 (799)
T 2zkm_X 753 EEG----NKFLGHRIIPINALNSG 772 (799)
T ss_dssp ETT----TEEEEEEEEEGGGBCCE
T ss_pred EeC----CCccceEeeehhhcCCC
Confidence 986 78999999999887653
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.49 E-value=1.2e-12 Score=85.36 Aligned_cols=115 Identities=17% Similarity=0.297 Sum_probs=85.8
Q ss_pred ccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEECCeE----Eec-ccccCCCCCeEecEEEEEEeCCCCcEEEEEEeCCCC
Q 031128 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGKQK----LKT-RVVKNNVNPEWNEDLTLSISDSNLPIKLTVYDKDTF 77 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~~~~----~~T-~~~~~~~~P~w~e~f~f~~~~~~~~l~i~v~d~~~~ 77 (165)
....|+|.+.++.--+... ....||||.+.+.... .+| ...++|..|.||++|.-.+.+ +..|.|.|++...
T Consensus 4 m~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~a~- 81 (126)
T 1yrk_A 4 MAPFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE-GRVIQIVLMRAAE- 81 (126)
T ss_dssp CCCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT-TCEEEEEEEEETT-
T ss_pred cCccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC-CEEEEEEEEcCCC-
Confidence 4456888887665322111 2358999999988433 244 666778999999999999864 6679999997654
Q ss_pred CCCCeeEEEEEechhhhhhhcccccCCCCceEEEEEeeCCCccccccceeEEeCCcEEeeeeeeeccceeeeEEEEEEEE
Q 031128 78 SLDDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLRNVEVGEVKIQLEWI 157 (165)
Q Consensus 78 ~~d~~iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~G~l~l~l~~~ 157 (165)
+|++.+++++.++....+. .+| ..+.|++|+ ++|+|++.++|.
T Consensus 82 ---~fvAn~tV~~edL~~~c~~------------------------------~~g--~~e~WvdLe--P~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 ---EPVSEVTVGVSVLAERCKK------------------------------NNG--KAEFWLDLQ--PQAKVLMSVQYF 124 (126)
T ss_dssp ---EEEEEEEEEHHHHHHHHHT------------------------------TTT--EEEEEEECB--SSCEEEEEEEEE
T ss_pred ---CeeeEEEEEHHHHHhhhcc------------------------------CCC--ceEEEEecc--cCcEEEEEEEEe
Confidence 8999999999999975322 012 239999998 899999999986
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=99.45 E-value=1.5e-12 Score=85.98 Aligned_cols=116 Identities=15% Similarity=0.286 Sum_probs=86.8
Q ss_pred ccEEEEEEEEEeeCCCCC--CCCCCCcEEEEEECCe-E---Eec-ccccCCCCCeEecEEEEEEeCCCCcEEEEEEeCCC
Q 031128 4 LMGLLRVHVLRGVNLAVR--DVVSSDPYVVIKMGKQ-K---LKT-RVVKNNVNPEWNEDLTLSISDSNLPIKLTVYDKDT 76 (165)
Q Consensus 4 ~~g~L~V~v~~a~~L~~~--~~~~~dpyv~v~~~~~-~---~~T-~~~~~~~~P~w~e~f~f~~~~~~~~l~i~v~d~~~ 76 (165)
..+.|+|.+.++.--+.. .....||||.|.+... . .+| ...++|..|.||+.|.-.+.+ +..|.|.|++...
T Consensus 8 m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~a~ 86 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK-GRVMQIIVKGKNV 86 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS-SCEEEEEEECSSC
T ss_pred cCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC-CeEEEEEEEcCCC
Confidence 455688888776643322 2346899999998843 2 455 556678999999999988864 6679999997553
Q ss_pred CCCCCeeEEEEEechhhhhhhcccccCCCCceEEEEEeeCCCccccccceeEEeCCcEEeeeeeeeccceeeeEEEEEEE
Q 031128 77 FSLDDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLRNVEVGEVKIQLEW 156 (165)
Q Consensus 77 ~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~G~l~l~l~~ 156 (165)
+|++.++|++.++....+. .+|+ .+.|++|+ ++|+|++.++|
T Consensus 87 ----~fVAn~tV~~edL~~~ck~------------------------------~~g~--~e~WvdLe--P~Gkl~v~i~~ 128 (138)
T 2enj_A 87 ----DLISETTVELYSLAERCRK------------------------------NNGK--TEIWLELK--PQGRMLMNARY 128 (138)
T ss_dssp ----SCCEEEEEESHHHHHHHHH------------------------------TTTC--EEEEEECB--SSCEEEEEEEE
T ss_pred ----CeeeEEEEEHHHHHhhhcc------------------------------CCCc--eEEEEecc--cCcEEEEEEEE
Confidence 8999999999999975321 0122 29999998 89999999998
Q ss_pred Ee
Q 031128 157 ID 158 (165)
Q Consensus 157 ~~ 158 (165)
.-
T Consensus 129 ~~ 130 (138)
T 2enj_A 129 FL 130 (138)
T ss_dssp CC
T ss_pred EE
Confidence 53
No 52
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=96.19 E-value=0.16 Score=36.25 Aligned_cols=109 Identities=11% Similarity=0.118 Sum_probs=66.1
Q ss_pred cccEEEEEEEEEeeCCCCCCCCCCCcEEEEEEC-------------------CeEEecccccCCCCCeEecEEEEEEeCC
Q 031128 3 NLMGLLRVHVLRGVNLAVRDVVSSDPYVVIKMG-------------------KQKLKTRVVKNNVNPEWNEDLTLSISDS 63 (165)
Q Consensus 3 ~~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~~~-------------------~~~~~T~~~~~~~~P~w~e~f~f~~~~~ 63 (165)
+..+.|.|++.+|.--........|--|.+.+. -..++|.+...+.+|.|+|++.+.+...
T Consensus 24 d~RNdLYVtl~~g~F~~~~k~~aRNIeV~vevr~~~G~~i~~~I~~~sg~~~~se~~S~V~YHnk~P~w~EtIKi~LP~~ 103 (220)
T 3l4c_A 24 DVRNDIYVTLVQGDFDKGSKTTAKNVEVTVSVYDEDGKRLEHVIFPGAGDEAISEYKSVIYYQVKQPRWFETVKVAIPIE 103 (220)
T ss_dssp --CEEEEEEEEEEECCCSSSSSCCCEEEEEEEEETTSCBCCSCEECTTCCSCBSCEECCCCTTCSSCCCCEEEEEEECTT
T ss_pred CCcccEEEEeeEeEECCCCCCCcceEEEEEEEEcCCCCCcccCEEcCCCCCCceeEEEEEEEcCCCCCceEeEEEeeChh
Confidence 356778888888863221112223444444431 0356788888889999999999998654
Q ss_pred C---CcEEEEEEeCCCC----CCCCeeEEEEEechhhhhhhcccccCCCCceEEEEEeeCC
Q 031128 64 N---LPIKLTVYDKDTF----SLDDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSR 117 (165)
Q Consensus 64 ~---~~l~i~v~d~~~~----~~d~~iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~ 117 (165)
. ..|.|++++...- ..+..+|.+.+||-+-. . .-+..|.--+.++..+
T Consensus 104 ~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~~d--G----~~L~DG~H~L~vyk~d 158 (220)
T 3l4c_A 104 DVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMRYD--G----TTLRDGEHDLIVYKAE 158 (220)
T ss_dssp SSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBCTT--S----CBCCSEEEEEEEEECC
T ss_pred hcCCeEEEEEEEEecccccccccCCeeEEEEEEcccCC--C----cEEccCCEEEEEEEcc
Confidence 3 2389999875432 12357899999984311 0 1245666555555543
No 53
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=95.92 E-value=0.11 Score=44.90 Aligned_cols=103 Identities=16% Similarity=0.250 Sum_probs=67.9
Q ss_pred cEEEEEEEEEeeCCCCCCCCCCCcEEEEEE--CCe----EEecccccCCCCCeEecEEEEEEeC---C-CCcEEEEEEeC
Q 031128 5 MGLLRVHVLRGVNLAVRDVVSSDPYVVIKM--GKQ----KLKTRVVKNNVNPEWNEDLTLSISD---S-NLPIKLTVYDK 74 (165)
Q Consensus 5 ~g~L~V~v~~a~~L~~~~~~~~dpyv~v~~--~~~----~~~T~~~~~~~~P~w~e~f~f~~~~---~-~~~l~i~v~d~ 74 (165)
...+.|+|..+.++...+ ..+-||.+.+ |++ ...|..+.-..+|.|||.+.|++.- | +..|.|+||+.
T Consensus 216 ~~~f~i~i~~~~~~~~~~--~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 293 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNADE--RMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYAV 293 (940)
T ss_dssp CSEEEEEEEEEECCCC-----CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred CCceEEEEEEecccCCCC--CceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEEe
Confidence 457899999999986542 3567777664 432 3445555446789999999998853 2 34599999995
Q ss_pred CCC--C----------CCCeeEEEEEechhhhhhhcccccCCCCceEEEEEeeC
Q 031128 75 DTF--S----------LDDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPS 116 (165)
Q Consensus 75 ~~~--~----------~d~~iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~ 116 (165)
..- + .+..+|.+.++|-+... .+..|.....++|.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~-------~l~~G~~~l~lw~~ 340 (940)
T 2wxf_A 294 VEKAKKARSTKKKSKKADCPIAWANLMLFDYKD-------QLKTGERCLYMWPS 340 (940)
T ss_dssp C----------------CEEEEEEEEESBCTTS-------BBCCEEEEEECEEC
T ss_pred cCCccCccccccccccccceEEEEeeeEECCcC-------ccccCCEEEEEeeC
Confidence 321 1 23489999999976443 34567766666663
No 54
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=95.73 E-value=0.15 Score=44.55 Aligned_cols=103 Identities=19% Similarity=0.257 Sum_probs=68.2
Q ss_pred cEEEEEEEEEeeCCCCCCCCCCCcEEEEEE--CC----eEEecccccCCCCCeEecEEEEEEeC---C-CCcEEEEEEeC
Q 031128 5 MGLLRVHVLRGVNLAVRDVVSSDPYVVIKM--GK----QKLKTRVVKNNVNPEWNEDLTLSISD---S-NLPIKLTVYDK 74 (165)
Q Consensus 5 ~g~L~V~v~~a~~L~~~~~~~~dpyv~v~~--~~----~~~~T~~~~~~~~P~w~e~f~f~~~~---~-~~~l~i~v~d~ 74 (165)
...+.|+|..+.++........+-||.+.+ |+ ...+|+.+. ..+|.|||.+.|++.- | ...|.|+||+.
T Consensus 354 ~~~f~v~i~~~~~~n~~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~ 432 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICSV 432 (1091)
T ss_dssp CSEEEEEEEEESCCCCCCSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECCC
T ss_pred CCCEEEEEEEecCCCCCccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEEe
Confidence 357899999998876443334567888775 32 344554443 4578899999998853 2 34599999986
Q ss_pred CCC----CCCCeeEEEEEechhhhhhhcccccCCCCceEEEEEee
Q 031128 75 DTF----SLDDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQP 115 (165)
Q Consensus 75 ~~~----~~d~~iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~ 115 (165)
... .....||.+.++|-+... .+..|.....+.+
T Consensus 433 ~~~~~~~~~~~~lg~~n~~lfd~~~-------~L~~G~~~L~lW~ 470 (1091)
T 3hhm_A 433 KGRKGAKEEHCPLAWGNINLFDYTD-------TLVSGKMALNLWP 470 (1091)
T ss_dssp CCCC-------CCEEEEEESBCTTC-------BBCCEEEEEECEE
T ss_pred cCccCcccccceeEEeeeeeEccCC-------eEEcCCeEEEeec
Confidence 542 124579999999976543 4456776666665
No 55
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=94.56 E-value=0.65 Score=31.27 Aligned_cols=92 Identities=16% Similarity=0.184 Sum_probs=62.7
Q ss_pred CcccEEEEEEEEEeeCCCCCC---CCCCCcE--EEEEECC-eEEecccccCCCCCeEecEEEEEEeCCC--------CcE
Q 031128 2 ENLMGLLRVHVLRGVNLAVRD---VVSSDPY--VVIKMGK-QKLKTRVVKNNVNPEWNEDLTLSISDSN--------LPI 67 (165)
Q Consensus 2 ~~~~g~L~V~v~~a~~L~~~~---~~~~dpy--v~v~~~~-~~~~T~~~~~~~~P~w~e~f~f~~~~~~--------~~l 67 (165)
+...+.+.|.|.++.- .+.. .+..+|. |.+.+-. +.+.|.++. ..+|.+|-+-.|.+...+ ..+
T Consensus 14 ~~gEnlfEihi~~~~~-~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l 91 (156)
T 2yrb_A 14 ERGENLFEIHINKVTF-SSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTI 91 (156)
T ss_dssp CSSCEEEEEEEEEECC-CHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCE
T ss_pred cCCCcEEEEEEeEEEE-cHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCE
Confidence 4566889999998873 2211 2334564 5544444 445555554 789999998888885322 358
Q ss_pred EEEEEeCCCCCCCCeeEEEEEechhhhhh
Q 031128 68 KLTVYDKDTFSLDDKMGDAEFYITPFLEA 96 (165)
Q Consensus 68 ~i~v~d~~~~~~d~~iG~~~i~l~~l~~~ 96 (165)
.++++..... .-+.||.++|+|.++...
T Consensus 92 ~lELhqa~g~-~~~tla~~~I~l~~lLe~ 119 (156)
T 2yrb_A 92 TLEVHQAYST-EYETIAACQLKFHEILEK 119 (156)
T ss_dssp EEEEEEECSS-CEEEEEEEEECCSHHHHC
T ss_pred EEEEEEeeCC-CceEEEEEEEEhHHhhCc
Confidence 9999887532 557999999999999874
No 56
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=94.31 E-value=0.55 Score=40.66 Aligned_cols=104 Identities=15% Similarity=0.084 Sum_probs=64.2
Q ss_pred EEEEEEEEEeeCCCCCCCCCCCcEEEEEE--CCeE---EecccccCCCCCeEecEEEEEEeC---C-CCcEEEEEEeCCC
Q 031128 6 GLLRVHVLRGVNLAVRDVVSSDPYVVIKM--GKQK---LKTRVVKNNVNPEWNEDLTLSISD---S-NLPIKLTVYDKDT 76 (165)
Q Consensus 6 g~L~V~v~~a~~L~~~~~~~~dpyv~v~~--~~~~---~~T~~~~~~~~P~w~e~f~f~~~~---~-~~~l~i~v~d~~~ 76 (165)
..+.|+|..+...........+-||.+.+ |++. .+|..+.-+.+|.|||.+.|.+.- | +..|.|+||+...
T Consensus 218 ~~f~i~i~~~~~~~~~~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~ 297 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLPRTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGAK 297 (961)
T ss_dssp SEEEEEEEEEECSSCCTTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEEC
T ss_pred CceEEEEeecccccccCCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEeccc
Confidence 45788888876522112234567777654 4432 345444445679999999998753 2 3459999997432
Q ss_pred CC----------------CCCeeEEEEEechhhhhhhcccccCCCCceEEEEEeeC
Q 031128 77 FS----------------LDDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPS 116 (165)
Q Consensus 77 ~~----------------~d~~iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~ 116 (165)
.+ +...+|.+.++|-+... .+..|.....++|.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~~-------~l~~G~~~L~lw~~ 346 (961)
T 1e7u_A 298 PALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHRF-------LLRHGEYVLHMWQL 346 (961)
T ss_dssp --------------------CEEEEEEEESBCTTS-------BBCCEEEEEECEEC
T ss_pred CccccccccccccccccccceeEEEEeeeeecCCC-------ccccCCEEEEEeeC
Confidence 21 34589999999976543 34567766666663
No 57
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=89.69 E-value=0.45 Score=41.74 Aligned_cols=102 Identities=14% Similarity=0.212 Sum_probs=62.3
Q ss_pred cEEEEEEEEEeeCCCCCCCCCCCcEEEE--EECCeE----EecccccCCCCCeEecEEEEEEeCCC----CcEEEEEEeC
Q 031128 5 MGLLRVHVLRGVNLAVRDVVSSDPYVVI--KMGKQK----LKTRVVKNNVNPEWNEDLTLSISDSN----LPIKLTVYDK 74 (165)
Q Consensus 5 ~g~L~V~v~~a~~L~~~~~~~~dpyv~v--~~~~~~----~~T~~~~~~~~P~w~e~f~f~~~~~~----~~l~i~v~d~ 74 (165)
...+.|+|..+.++...+ ..+-||.+ ..|++. ..|..+.-..+|.|||.+.|++.-.+ ..|.|+||+.
T Consensus 352 ~~~f~i~i~~~~~~~~~~--~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~ 429 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTEE--TVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYAV 429 (1092)
T ss_dssp CSEEEEEECCCCCCCCCS--SCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCCC
T ss_pred CCCEEEEEEEeccCCCCC--CceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEEe
Confidence 357889999998886543 34566654 445433 34544444678999999999886432 4499999985
Q ss_pred CCC----------------------CCCCeeEEEEEechhhhhhhcccccCCCCceEEEEEee
Q 031128 75 DTF----------------------SLDDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQP 115 (165)
Q Consensus 75 ~~~----------------------~~d~~iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~ 115 (165)
... +.+..+|.+.++|-+... .+..|.....++|
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~-------~l~~G~~~l~lw~ 485 (1092)
T 2y3a_A 430 LDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFKG-------QLRSGDVILHSWS 485 (1092)
T ss_dssp ------------------------------CCEEEEESBCTTC-------BBCCEEEECCCCT
T ss_pred cCccccccccccccccccccccccccccceeEEEeeeeECCcC-------cccCCCeEEEEee
Confidence 311 012378888888865443 3345665555555
Done!