Query         031128
Match_columns 165
No_of_seqs    248 out of 1776
Neff          9.6 
Searched_HMMs 13730
Date          Mon Mar 25 15:13:15 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031128.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031128hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1wfja_ b.7.1.2 (A:) C2 domain 100.0 6.3E-28 4.6E-32  161.8  16.6  127    2-164     6-136 (136)
  2 d2ep6a1 b.7.1.1 (A:92-217) Mul 100.0 2.3E-28 1.7E-32  162.0  11.2   93    3-95      3-96  (126)
  3 d1rlwa_ b.7.1.1 (A:) Domain fr  99.9 4.9E-26 3.6E-30  150.5  14.0  116    5-158     2-125 (126)
  4 d1gmia_ b.7.1.1 (A:) Domain fr  99.9   2E-25 1.4E-29  149.5  16.1  122    1-160     1-135 (136)
  5 d2nq3a1 b.7.1.1 (A:13-145) E3   99.9 1.3E-24 9.4E-29  145.0  16.5   92    5-97      5-97  (133)
  6 d1a25a_ b.7.1.2 (A:) C2 domain  99.9 5.6E-24 4.1E-28  141.6  10.4   91    5-95     14-112 (132)
  7 d1qasa2 b.7.1.1 (A:626-756) PI  99.9 8.5E-22 6.2E-26  130.8  15.7   90    6-95      4-103 (131)
  8 d2cjta1 b.7.1.1 (A:1-128) Unc-  99.9 4.1E-22   3E-26  131.6  13.2   88    5-96      1-88  (128)
  9 d1rsya_ b.7.1.2 (A:) Synaptoga  99.9 2.1E-22 1.5E-26  135.6  10.7   93    4-96     32-131 (143)
 10 d1rh8a_ b.7.1.2 (A:) Piccolo {  99.9 1.1E-22 7.8E-27  136.8   6.0   95    5-99     17-130 (142)
 11 d1dqva1 b.7.1.2 (A:295-424) Sy  99.9   2E-21 1.4E-25  128.8  11.1   90    3-92     15-111 (130)
 12 d2bwqa1 b.7.1.2 (A:729-853) Re  99.8 2.1E-20 1.5E-24  122.9  10.1   93    3-95     11-115 (125)
 13 d2cm5a1 b.7.1.2 (A:541-677) C2  99.8 5.6E-20 4.1E-24  122.6  12.0   94    3-96     12-114 (137)
 14 d1wfma_ b.7.1.2 (A:) Synaptota  99.8 4.4E-20 3.2E-24  123.4  10.7   92    4-97     24-122 (138)
 15 d1ugka_ b.7.1.2 (A:) Synaptota  99.8   7E-20 5.1E-24  122.4  11.3   92    4-95     20-120 (138)
 16 d1uowa_ b.7.1.2 (A:) Synaptoga  99.8 2.8E-19 2.1E-23  121.9  11.8   92    4-95     23-123 (157)
 17 d1bdya_ b.7.1.1 (A:) Domain fr  99.8   3E-19 2.2E-23  117.0  11.0  111    8-158     7-122 (123)
 18 d1w15a_ b.7.1.2 (A:) Synaptota  99.8 2.9E-19 2.1E-23  119.4  10.1   92    4-95     13-113 (138)
 19 d1dqva2 b.7.1.2 (A:425-569) Sy  99.7   8E-19 5.8E-23  118.1   4.1   93    3-95     17-118 (145)
 20 d2zkmx2 b.7.1.1 (X:678-799) Ph  99.7   3E-16 2.2E-20  102.3  11.9   84    7-97      2-96  (122)
 21 d1e7ua2 b.7.1.1 (A:351-524) Ph  96.8   0.011 8.4E-07   39.1  10.5  104    6-116     9-137 (174)
 22 d2yrba1 b.7.1.1 (A:596-737) Fa  93.9    0.41   3E-05   30.1   9.9   95    1-96      5-111 (142)
 23 d1d5ra1 b.7.1.1 (A:188-351) Pt  31.1      51  0.0037   19.8   9.0   80    8-89      6-89  (141)

No 1  
>d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.96  E-value=6.3e-28  Score=161.76  Aligned_cols=127  Identities=25%  Similarity=0.407  Sum_probs=108.6

Q ss_pred             CcccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEECCeEEecccccC-CCCCeEecEEEEEEeCCCCcEEEEEEeCCCCCC
Q 031128            2 ENLMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGKQKLKTRVVKN-NVNPEWNEDLTLSISDSNLPIKLTVYDKDTFSL   79 (165)
Q Consensus         2 ~~~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~~~~~~T~~~~~-~~~P~w~e~f~f~~~~~~~~l~i~v~d~~~~~~   79 (165)
                      ..+.|.|.|+|++|++|+..+ .+.+||||+++++.+.++|+++++ +.||.|||+|.|.+......|.|+|||++.+++
T Consensus         6 ~~p~G~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~t~~~~~~~~nP~Wne~f~f~v~~~~~~L~v~V~d~d~~~~   85 (136)
T d1wfja_           6 SGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGTE   85 (136)
T ss_dssp             CCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSCTT
T ss_pred             CCCcEEEEEEEEEeeCCCCCCCCCCCCccEEEEEeeeeEEEEEEecCCCcEEEeeEEEEEEcCccceEEEEEEEecCCCC
Confidence            368899999999999999988 789999999999999999999874 789999999999998777779999999999999


Q ss_pred             CCeeEEEEEechhhhhhhcccccCCCCceEEEEEeeCCCccccccceeEEeCCcEEeeeeeeec--cceeeeEEEEEEEE
Q 031128           80 DDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLR--NVEVGEVKIQLEWI  157 (165)
Q Consensus        80 d~~iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~--~~~~G~l~l~l~~~  157 (165)
                      |++||++.|+|.++......                                    ...|+.+.  ....|+|+|.++|.
T Consensus        86 d~~iG~~~i~L~~l~~~~~~------------------------------------~~~~~~l~~~~~~~G~i~l~l~~~  129 (136)
T d1wfja_          86 DDAVGEATIPLEPVFVEGSI------------------------------------PPTAYNVVKDEEYKGEIWVALSFK  129 (136)
T ss_dssp             TCCSEEEEEESHHHHHHSEE------------------------------------EEEEEEEEETTEEEEEEEEEEEEE
T ss_pred             CCEEEEEEEEhHHhcccCCc------------------------------------CcEEEEecCCCccCEEEEEEEEEE
Confidence            99999999999998764321                                    24556553  34479999999999


Q ss_pred             eCCCCCC
Q 031128          158 DIPGSRG  164 (165)
Q Consensus       158 ~~~~~~~  164 (165)
                      |...+.|
T Consensus       130 p~~p~~g  136 (136)
T d1wfja_         130 PSGPSSG  136 (136)
T ss_dssp             ECCSCCC
T ss_pred             eCCCCCC
Confidence            9876654


No 2  
>d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane domain-containing protein 2, MCTP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95  E-value=2.3e-28  Score=161.96  Aligned_cols=93  Identities=31%  Similarity=0.577  Sum_probs=87.1

Q ss_pred             cccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEECCeEEecccccCCCCCeEecEEEEEEeCCCCcEEEEEEeCCCCCCCC
Q 031128            3 NLMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGKQKLKTRVVKNNVNPEWNEDLTLSISDSNLPIKLTVYDKDTFSLDD   81 (165)
Q Consensus         3 ~~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~~~~~~T~~~~~~~~P~w~e~f~f~~~~~~~~l~i~v~d~~~~~~d~   81 (165)
                      +++|.|+|+|++|++|+.++ .+.+||||++++++++++|++++++.||.|||.|.|.+..+...|.|+|||++.+++|+
T Consensus         3 ~~~G~L~V~v~~A~~L~~~d~~g~~Dpyv~v~~~~~~~~T~~~~~t~nP~wne~f~f~v~~~~~~L~i~V~d~~~~~~d~   82 (126)
T d2ep6a1           3 KDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGDKPPD   82 (126)
T ss_dssp             CCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETTEEEE
T ss_pred             CccEEEEEEEEEeECCCCCCCCCCcCeEEEEEcCCeEEEEEeeCCceeEEEEEEEEEEEeccCceeEEEEEEccCCcCcc
Confidence            47899999999999999988 78999999999999999999999999999999999999877777999999999998999


Q ss_pred             eeEEEEEechhhhh
Q 031128           82 KMGDAEFYITPFLE   95 (165)
Q Consensus        82 ~iG~~~i~l~~l~~   95 (165)
                      +||++.++|.++..
T Consensus        83 ~lG~~~i~l~~l~~   96 (126)
T d2ep6a1          83 FLGKVAIPLLSIRD   96 (126)
T ss_dssp             ECCBCEEEGGGCCS
T ss_pred             eEEEEEEEHHHCCC
Confidence            99999999988754


No 3  
>d1rlwa_ b.7.1.1 (A:) Domain from cytosolic phospholipase A2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94  E-value=4.9e-26  Score=150.49  Aligned_cols=116  Identities=22%  Similarity=0.412  Sum_probs=101.1

Q ss_pred             cEEEEEEEEEeeCCCCCC----CCCCCcEEEEEECC---eEEecccccCCCCCeEecEEEEEEeCCCC-cEEEEEEeCCC
Q 031128            5 MGLLRVHVLRGVNLAVRD----VVSSDPYVVIKMGK---QKLKTRVVKNNVNPEWNEDLTLSISDSNL-PIKLTVYDKDT   76 (165)
Q Consensus         5 ~g~L~V~v~~a~~L~~~~----~~~~dpyv~v~~~~---~~~~T~~~~~~~~P~w~e~f~f~~~~~~~-~l~i~v~d~~~   76 (165)
                      .+.|+|+|++|+||+...    .+.+||||++.++.   ++++|+++.++.||.|||+|.|.+..... .|.|+|||++.
T Consensus         2 s~~l~V~v~~a~~L~~~~~~d~~~~~Dpyv~v~l~~~~~~~~~T~~~~~t~nP~wne~f~f~i~~~~~~~L~v~V~d~d~   81 (126)
T d1rlwa_           2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY   81 (126)
T ss_dssp             CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred             CcEEEEEEEEccCCCCccccccCCCCCcEEEEEECCcccceeEeeecCCCccceeceeeeecccCcccCcEEEEEEECCC
Confidence            578999999999998753    57899999999974   67899999999999999999999976654 49999999987


Q ss_pred             CCCCCeeEEEEEechhhhhhhcccccCCCCceEEEEEeeCCCccccccceeEEeCCcEEeeeeeeeccceeeeEEEEEEE
Q 031128           77 FSLDDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLRNVEVGEVKIQLEW  156 (165)
Q Consensus        77 ~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~G~l~l~l~~  156 (165)
                      . +|++||++.++|+++..+..                                     .+.|++|.....|++++.+++
T Consensus        82 ~-~d~~lG~~~i~L~~l~~~~~-------------------------------------~~~~~~L~~~~~g~i~~~l~~  123 (126)
T d1rlwa_          82 V-MDETLGTATFTVSSMKVGEK-------------------------------------KEVPFIFNQVTEMVLEMSLEV  123 (126)
T ss_dssp             S-CCEEEEEEEEEGGGSCTTCE-------------------------------------EEEEEEETTTEEEEEEEEEEC
T ss_pred             C-CCCeEEEEEEEHHHccCCCe-------------------------------------EEEEEEccCCCeEEEEEEEEE
Confidence            6 68999999999998865432                                     278999999999999999998


Q ss_pred             Ee
Q 031128          157 ID  158 (165)
Q Consensus       157 ~~  158 (165)
                      .|
T Consensus       124 ~~  125 (126)
T d1rlwa_         124 AS  125 (126)
T ss_dssp             CC
T ss_pred             Ee
Confidence            76


No 4  
>d1gmia_ b.7.1.1 (A:) Domain from protein kinase C epsilon {Rat (Rattus rattus) [TaxId: 10117]}
Probab=99.94  E-value=2e-25  Score=149.52  Aligned_cols=122  Identities=17%  Similarity=0.365  Sum_probs=104.4

Q ss_pred             CCcccEEEEEEEEEeeCCCCCC------------CCCCCcEEEEEECCeE-EecccccCCCCCeEecEEEEEEeCCCCcE
Q 031128            1 MENLMGLLRVHVLRGVNLAVRD------------VVSSDPYVVIKMGKQK-LKTRVVKNNVNPEWNEDLTLSISDSNLPI   67 (165)
Q Consensus         1 ~~~~~g~L~V~v~~a~~L~~~~------------~~~~dpyv~v~~~~~~-~~T~~~~~~~~P~w~e~f~f~~~~~~~~l   67 (165)
                      |+=..|.|.|+|++|++|++.+            .+.+||||+++++++. .+|+++.++.+|.|||+|.|.+.+ ...|
T Consensus         1 ~~~~~G~L~v~I~~A~~L~~~~~~~~~~~~~~~~~~~~DPYv~v~l~~~~~~~T~~~~~t~~P~Wne~f~f~v~~-~~~l   79 (136)
T d1gmia_           1 MVVFNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCN-GRKI   79 (136)
T ss_dssp             CCCEEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEE
T ss_pred             CccEEEEEEEEEEEeECCCcccccccccccccCCCCCcCcEEEEEeCCCcCcEeeEEcCCCCccCccEEEEEEec-CCce
Confidence            5667899999999999998741            5678999999999866 589999999999999999999975 4569


Q ss_pred             EEEEEeCCCCCCCCeeEEEEEechhhhhhhcccccCCCCceEEEEEeeCCCccccccceeEEeCCcEEeeeeeeecccee
Q 031128           68 KLTVYDKDTFSLDDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLRNVEV  147 (165)
Q Consensus        68 ~i~v~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~  147 (165)
                      .|+|||++.+++|++||.+.|+|+++......                                   ..+.|++|+  ++
T Consensus        80 ~i~V~d~~~~~~d~~iG~~~i~l~~l~~~~~~-----------------------------------~~~~w~~L~--p~  122 (136)
T d1gmia_          80 ELAVFHDAPIGYDDFVANCTIQFEELLQNGSR-----------------------------------HFEDWIDLE--PE  122 (136)
T ss_dssp             EEEEEECCSSSSCEEEEEEEEEHHHHTSTTCS-----------------------------------EEEEEEECB--SS
T ss_pred             EEEEEEecCCCCceeEEEEEEEHHHhhhcCCc-----------------------------------ceeEEEeCC--CC
Confidence            99999999999999999999999998765322                                   248899997  68


Q ss_pred             eeEEEEEEEEeCC
Q 031128          148 GEVKIQLEWIDIP  160 (165)
Q Consensus       148 G~l~l~l~~~~~~  160 (165)
                      |+|++++++.+-+
T Consensus       123 G~v~l~v~~~~~~  135 (136)
T d1gmia_         123 GKVYVIIDLSGSS  135 (136)
T ss_dssp             CEEEEEEEEEEEE
T ss_pred             cEEEEEEEEEeCC
Confidence            9999999998754


No 5  
>d2nq3a1 b.7.1.1 (A:13-145) E3 ubiquitin-protein ligase Itchy {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93  E-value=1.3e-24  Score=144.95  Aligned_cols=92  Identities=22%  Similarity=0.348  Sum_probs=83.8

Q ss_pred             cEEEEEEEEEeeCCCCCC-CCCCCcEEEEEECCeEEecccccCCCCCeEecEEEEEEeCCCCcEEEEEEeCCCCCCCCee
Q 031128            5 MGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGKQKLKTRVVKNNVNPEWNEDLTLSISDSNLPIKLTVYDKDTFSLDDKM   83 (165)
Q Consensus         5 ~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~~~~~~T~~~~~~~~P~w~e~f~f~~~~~~~~l~i~v~d~~~~~~d~~i   83 (165)
                      .+.|.|+|++|++++..+ .+.+||||++.++++.++|++++++.||.|||.|.|.+.. ...|.|+|||++.+++|++|
T Consensus         5 ~~~L~v~v~~A~~~~~~~~~~~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~~~~-~~~l~~~V~d~d~~~~d~~i   83 (133)
T d2nq3a1           5 KSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP-VSKLHFRVWSHQTLKSDVLL   83 (133)
T ss_dssp             CEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT-TCEEEEEEEECCSSSCCEEE
T ss_pred             ceEEEEEEEEeECCCcCCCCCCcCeEEEEEECCeEEeeEEEEecccEEEcceEEEEEEe-cceeEEEEEEccCCCCCceE
Confidence            478999999999998877 7789999999999999999999999999999999999864 56799999999999999999


Q ss_pred             EEEEEechhhhhhh
Q 031128           84 GDAEFYITPFLEAL   97 (165)
Q Consensus        84 G~~~i~l~~l~~~~   97 (165)
                      |++.++|.++....
T Consensus        84 G~~~i~L~~l~~~~   97 (133)
T d2nq3a1          84 GTAALDIYETLKSN   97 (133)
T ss_dssp             EEEEEEHHHHHHHT
T ss_pred             EEEEEEHHHhhhhc
Confidence            99999999987654


No 6  
>d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.90  E-value=5.6e-24  Score=141.61  Aligned_cols=91  Identities=34%  Similarity=0.516  Sum_probs=81.1

Q ss_pred             cEEEEEEEEEeeCCCCCC-CCCCCcEEEEEE-----CCeEEecccccCCCCCeEecEEEEEEeCCC--CcEEEEEEeCCC
Q 031128            5 MGLLRVHVLRGVNLAVRD-VVSSDPYVVIKM-----GKQKLKTRVVKNNVNPEWNEDLTLSISDSN--LPIKLTVYDKDT   76 (165)
Q Consensus         5 ~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~-----~~~~~~T~~~~~~~~P~w~e~f~f~~~~~~--~~l~i~v~d~~~   76 (165)
                      .+.|.|+|++|++|+.++ .+.+||||++++     +..+++|++++++.||.|||.|.|.+....  ..|.|+|||++.
T Consensus        14 ~~~L~V~V~~a~~L~~~d~~g~~DpYv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~   93 (132)
T d1a25a_          14 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL   93 (132)
T ss_dssp             SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS
T ss_pred             CCEEEEEEEeeeCCCCCCCCCCcCeEEEEEEccCCCCccccEEeeecCCCCCccceEEEEEeEccccCCEEeEEEEecCC
Confidence            468999999999999988 788999999998     456789999999999999999999986543  359999999999


Q ss_pred             CCCCCeeEEEEEechhhhh
Q 031128           77 FSLDDKMGDAEFYITPFLE   95 (165)
Q Consensus        77 ~~~d~~iG~~~i~l~~l~~   95 (165)
                      +++|++||.+.|++.++..
T Consensus        94 ~~~d~~iG~~~i~l~~l~~  112 (132)
T d1a25a_          94 TSRNDFMGSLSFGISELQK  112 (132)
T ss_dssp             SSCCEEEEEEEEEHHHHTT
T ss_pred             CCCCcEeEEEEEeHHHcCC
Confidence            9999999999999998754


No 7  
>d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.88  E-value=8.5e-22  Score=130.76  Aligned_cols=90  Identities=23%  Similarity=0.430  Sum_probs=75.9

Q ss_pred             EEEEEEEEEeeCCCCCC---CCCCCcEEEEEEC-----CeEEecccccCC-CCCeEecEEEEEEeCCC-CcEEEEEEeCC
Q 031128            6 GLLRVHVLRGVNLAVRD---VVSSDPYVVIKMG-----KQKLKTRVVKNN-VNPEWNEDLTLSISDSN-LPIKLTVYDKD   75 (165)
Q Consensus         6 g~L~V~v~~a~~L~~~~---~~~~dpyv~v~~~-----~~~~~T~~~~~~-~~P~w~e~f~f~~~~~~-~~l~i~v~d~~   75 (165)
                      ..|.|+|++|++|+..+   .+.+||||++++.     .++++|++++++ .||.|||+|.|.+..+. ..|.|+|||++
T Consensus         4 ~~l~V~Vi~a~~L~~~~~~~~~~~DPyV~v~l~g~~~~~~~~~T~~v~~~~~nP~wne~f~f~~~~~~~~~L~~~V~D~d   83 (131)
T d1qasa2           4 ERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDYD   83 (131)
T ss_dssp             EEEEEEEEEEESCCCCC-----CCCEEEEEEEESSTTTCEEEECCCCSSCSSSCEEEEEEEEEESCGGGCEEEEEEEECC
T ss_pred             EEEEEEEEEeeCCCCCCCCCCCCcCeEEEEEEccCCCCcEEEEEEEEecccCCceEEEEEEEEEEcchhceEEEEEEEec
Confidence            57999999999997543   6789999999983     578899988766 79999999999987654 34899999999


Q ss_pred             CCCCCCeeEEEEEechhhhh
Q 031128           76 TFSLDDKMGDAEFYITPFLE   95 (165)
Q Consensus        76 ~~~~d~~iG~~~i~l~~l~~   95 (165)
                      .+++|++||++.++|+.+..
T Consensus        84 ~~~~d~~iG~~~i~l~~l~~  103 (131)
T d1qasa2          84 SSSKNDFIGQSTIPWNSLKQ  103 (131)
T ss_dssp             TTTCCEEEEEEEEEGGGBCC
T ss_pred             CCCCCcEEEEEEEEEeccCC
Confidence            99999999999999987754


No 8  
>d2cjta1 b.7.1.1 (A:1-128) Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.88  E-value=4.1e-22  Score=131.57  Aligned_cols=88  Identities=23%  Similarity=0.393  Sum_probs=79.3

Q ss_pred             cEEEEEEEEEeeCCCCCCCCCCCcEEEEEECCeEEecccccCCCCCeEecEEEEEEeCCCCcEEEEEEeCCCCCCCCeeE
Q 031128            5 MGLLRVHVLRGVNLAVRDVVSSDPYVVIKMGKQKLKTRVVKNNVNPEWNEDLTLSISDSNLPIKLTVYDKDTFSLDDKMG   84 (165)
Q Consensus         5 ~g~L~V~v~~a~~L~~~~~~~~dpyv~v~~~~~~~~T~~~~~~~~P~w~e~f~f~~~~~~~~l~i~v~d~~~~~~d~~iG   84 (165)
                      ++.|.|+|.+|++|.+++  ..||||++++++.+.+|.+++ +.||.|||.|.|.+..+...|.|+|||++.. +|++||
T Consensus         1 ~~~L~V~v~~a~~l~~~~--~~dpYv~l~~~~~k~~T~~~k-~~nP~Wne~f~f~v~~~~~~L~v~V~d~~~~-~d~~lG   76 (128)
T d2cjta1           1 MSLLCVGVKKAKFDGAQE--KFNTYVTLKVQNVKSTTIAVR-GSQPSWEQDFMFEINRLDLGLTVEVWNKGLI-WDTMVG   76 (128)
T ss_dssp             CEEEEEEEEEEECSSCGG--GCEEEEEEEETTEEEECCCEE-SSSCEEEEEEEEEECCCSSEEEEEEEECCSS-CEEEEE
T ss_pred             CeEEEEEEEEEECCCCCC--CcCeEEEEEeCCEEEEEEEec-CCCCeEEEEEEEeeccccceEEEEEEeCCCc-CCcceE
Confidence            478999999999999876  679999999999999999886 4599999999999988888899999999887 699999


Q ss_pred             EEEEechhhhhh
Q 031128           85 DAEFYITPFLEA   96 (165)
Q Consensus        85 ~~~i~l~~l~~~   96 (165)
                      ++.|+|+++..+
T Consensus        77 ~~~I~L~~l~~~   88 (128)
T d2cjta1          77 TVWIPLRTIRQS   88 (128)
T ss_dssp             EEEEEGGGSCBC
T ss_pred             EEEEEehhhccC
Confidence            999999998653


No 9  
>d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.88  E-value=2.1e-22  Score=135.63  Aligned_cols=93  Identities=29%  Similarity=0.442  Sum_probs=81.4

Q ss_pred             ccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEE---CCeEEecccccCCCCCeEecEEEEEEeCC---CCcEEEEEEeCCC
Q 031128            4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKM---GKQKLKTRVVKNNVNPEWNEDLTLSISDS---NLPIKLTVYDKDT   76 (165)
Q Consensus         4 ~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~---~~~~~~T~~~~~~~~P~w~e~f~f~~~~~---~~~l~i~v~d~~~   76 (165)
                      ..+.|.|+|++|+||+..+ .+.+||||++++   +.+.++|++++++.||.|||.|.|.+...   ...|.|+|||++.
T Consensus        32 ~~~~L~V~V~~a~~L~~~~~~g~~dpyV~v~l~~~~~~~~kT~~~~~t~~P~wne~f~f~i~~~~l~~~~L~i~V~d~d~  111 (143)
T d1rsya_          32 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR  111 (143)
T ss_dssp             TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS
T ss_pred             CCCEEEEEEEEccCCCCCCCCCCCCeEEEEEEcCCCCeeEEEEEeccccCcceeeeeEEEEEeeccCCceEEEEEEEcCC
Confidence            3568999999999999888 788999999998   45678999999999999999999987543   3459999999999


Q ss_pred             CCCCCeeEEEEEechhhhhh
Q 031128           77 FSLDDKMGDAEFYITPFLEA   96 (165)
Q Consensus        77 ~~~d~~iG~~~i~l~~l~~~   96 (165)
                      ++++++||++.|+|.++..+
T Consensus       112 ~~~~~~iG~~~i~L~~~~~~  131 (143)
T d1rsya_         112 FSKHDIIGEFKVPMNTVDFG  131 (143)
T ss_dssp             SSCCEEEEEEEEEGGGCCCS
T ss_pred             CCCCcEEEEEEEEchhccCC
Confidence            98999999999999987543


No 10 
>d1rh8a_ b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.86  E-value=1.1e-22  Score=136.78  Aligned_cols=95  Identities=29%  Similarity=0.472  Sum_probs=80.6

Q ss_pred             cEEEEEEEEEeeCCCCCC-CCCCCcEEEEEECC--------------eEEecccccCCCCCeEecEEEEEEeC----CCC
Q 031128            5 MGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK--------------QKLKTRVVKNNVNPEWNEDLTLSISD----SNL   65 (165)
Q Consensus         5 ~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~~--------------~~~~T~~~~~~~~P~w~e~f~f~~~~----~~~   65 (165)
                      .|.|.|+|++|+||+..+ .+.+||||++++..              .+++|++++++.||.|||.|.|....    ...
T Consensus        17 ~~~L~V~V~~A~~L~~~d~~g~~DpyV~v~l~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~   96 (142)
T d1rh8a_          17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK   96 (142)
T ss_dssp             TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred             CCEEEEEEEEeECCCCcCCCCCCCcCEEEEEecCcccccccccCCCceeeeccCCcCCCCceeEEEEEEeeecccccCCC
Confidence            478999999999999988 88899999999842              23579999999999999999997533    234


Q ss_pred             cEEEEEEeCCCCCCCCeeEEEEEechhhhhhhcc
Q 031128           66 PIKLTVYDKDTFSLDDKMGDAEFYITPFLEALKM   99 (165)
Q Consensus        66 ~l~i~v~d~~~~~~d~~iG~~~i~l~~l~~~~~~   99 (165)
                      .|.|+|||++.+++|++||++.|+|.++......
T Consensus        97 ~L~i~V~d~d~~~~~~~lG~~~i~L~~l~~~~~~  130 (142)
T d1rh8a_          97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNT  130 (142)
T ss_dssp             EEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTC
T ss_pred             EEEEEEEEecCCCCCeeeEEEEEEhHHcCCCCCc
Confidence            5999999999999999999999999998765443


No 11 
>d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.86  E-value=2e-21  Score=128.82  Aligned_cols=90  Identities=31%  Similarity=0.451  Sum_probs=79.3

Q ss_pred             cccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC---CeEEecccccCCCCCeEecEEEEEEeCC---CCcEEEEEEeCC
Q 031128            3 NLMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG---KQKLKTRVVKNNVNPEWNEDLTLSISDS---NLPIKLTVYDKD   75 (165)
Q Consensus         3 ~~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~---~~~~~T~~~~~~~~P~w~e~f~f~~~~~---~~~l~i~v~d~~   75 (165)
                      ...+.|.|+|++|+||+..+ .+.+||||++++.   .++++|++++++.||.|||.|.|.+...   ...|.|+|||++
T Consensus        15 ~~~~~L~V~V~~a~~L~~~~~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~~P~wne~f~f~v~~~~~~~~~L~v~V~d~~   94 (130)
T d1dqva1          15 YGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFD   94 (130)
T ss_dssp             SSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECC
T ss_pred             CCCCEEEEEEEeeeCCccccCCCCcceEEEEEEccCCCceEeceeEcCCCCeeeeeEEEEEEchHHcCCCeEEEEEEEcC
Confidence            46789999999999999888 7889999999984   4678999999999999999999998653   345999999999


Q ss_pred             CCCCCCeeEEEEEechh
Q 031128           76 TFSLDDKMGDAEFYITP   92 (165)
Q Consensus        76 ~~~~d~~iG~~~i~l~~   92 (165)
                      .+++|++||++.|++..
T Consensus        95 ~~~~d~~iG~~~i~~~~  111 (130)
T d1dqva1          95 RFSRHDLIGQVVLDNLL  111 (130)
T ss_dssp             SSSCCCEEEEEECCCTT
T ss_pred             CCCCCceEEEEEECchh
Confidence            99999999999998654


No 12 
>d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis protein, rim2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83  E-value=2.1e-20  Score=122.92  Aligned_cols=93  Identities=24%  Similarity=0.404  Sum_probs=74.4

Q ss_pred             cccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC-----CeEEecccccCCCCCeEecEEEEE-EeCC---CCcEEEEEE
Q 031128            3 NLMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG-----KQKLKTRVVKNNVNPEWNEDLTLS-ISDS---NLPIKLTVY   72 (165)
Q Consensus         3 ~~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~-----~~~~~T~~~~~~~~P~w~e~f~f~-~~~~---~~~l~i~v~   72 (165)
                      ...+.|.|+|++|+||+..+ .+.+||||++.+.     ..+++|++++++.+|.|||.|.|. +...   ...|.|+||
T Consensus        11 ~~~~~L~V~V~~a~~L~~~~~~~~~dpyVkv~l~~~~~~~~~~kT~~~~~t~~P~wne~f~f~~~~~~~l~~~~L~i~v~   90 (125)
T d2bwqa1          11 KVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLW   90 (125)
T ss_dssp             TTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEE
T ss_pred             CCCCEEEEEEEEeECCCCcCCCCCCCEEEEEEEeCCCCCccccccCEEcCCCCCEEccEEEEeeeChhhcCCCEEEEEEE
Confidence            45678999999999999887 7889999999983     457899999999999999999997 4322   235999999


Q ss_pred             eCCCCC--CCCeeEEEEEechhhhh
Q 031128           73 DKDTFS--LDDKMGDAEFYITPFLE   95 (165)
Q Consensus        73 d~~~~~--~d~~iG~~~i~l~~l~~   95 (165)
                      |.+.++  ++++||++.++|+++..
T Consensus        91 d~~~~~~~~~~~iG~~~i~l~~~~~  115 (125)
T d2bwqa1          91 DQARVREEESEFLGEILIELETALL  115 (125)
T ss_dssp             EC-------CEEEEEEEEEGGGCCC
T ss_pred             ECCCCCCCCCeeEEEEEEEchhcCC
Confidence            999764  35599999999988764


No 13 
>d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.82  E-value=5.6e-20  Score=122.56  Aligned_cols=94  Identities=33%  Similarity=0.450  Sum_probs=81.2

Q ss_pred             cccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC-----CeEEecccccCCCCCeEecEEEEEEeCCC---CcEEEEEEe
Q 031128            3 NLMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG-----KQKLKTRVVKNNVNPEWNEDLTLSISDSN---LPIKLTVYD   73 (165)
Q Consensus         3 ~~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~-----~~~~~T~~~~~~~~P~w~e~f~f~~~~~~---~~l~i~v~d   73 (165)
                      ...+.|.|+|++|+||+..+ .+.+||||++++.     ..+++|++++++.+|.|||.|.|.+...+   ..|.|+|||
T Consensus        12 ~~~~~L~V~v~~a~nL~~~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~~P~wne~f~f~v~~~~l~~~~l~v~v~~   91 (137)
T d2cm5a1          12 TQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWD   91 (137)
T ss_dssp             TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEE
T ss_pred             CCCCEEEEEEEEEECCCCCCCCCCcCeEEEEEEEcCCccceeecCEeEcCCCCCccceEEEEEeEHHHccccEEEEEeee
Confidence            35678999999999999887 7789999999983     35679999999999999999999986432   459999999


Q ss_pred             CCCCCCCCeeEEEEEechhhhhh
Q 031128           74 KDTFSLDDKMGDAEFYITPFLEA   96 (165)
Q Consensus        74 ~~~~~~d~~iG~~~i~l~~l~~~   96 (165)
                      .+.++++++||++.+++..+..+
T Consensus        92 ~~~~~~~~~iG~~~i~l~~~~~~  114 (137)
T d2cm5a1          92 YDIGKSNDYIGGCQLGISAKGER  114 (137)
T ss_dssp             CCSSSCCEEEEEEEEETTCCHHH
T ss_pred             CCCCCCCCEEEEEEeCccccCcc
Confidence            99999999999999999876543


No 14 
>d1wfma_ b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82  E-value=4.4e-20  Score=123.42  Aligned_cols=92  Identities=22%  Similarity=0.255  Sum_probs=78.2

Q ss_pred             ccEEEEEEEEEeeCCCCCCCCCCCcEEEEEEC----CeEEecccccCCCCCeEecEEEEEEeCCC---CcEEEEEEeCCC
Q 031128            4 LMGLLRVHVLRGVNLAVRDVVSSDPYVVIKMG----KQKLKTRVVKNNVNPEWNEDLTLSISDSN---LPIKLTVYDKDT   76 (165)
Q Consensus         4 ~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~~~----~~~~~T~~~~~~~~P~w~e~f~f~~~~~~---~~l~i~v~d~~~   76 (165)
                      ..+.|.|+|++|++|+.  .+.+||||++.+.    ...++|++++++.+|.|||.|.|.+...+   ..|.|+|||++.
T Consensus        24 ~~~~L~V~v~~a~~L~~--~g~~dpyVkv~l~~~~~~~~~kT~v~~~~~~P~wne~f~f~v~~~~l~~~~L~~~V~d~~~  101 (138)
T d1wfma_          24 QKAELFVTRLEAVTSNH--DGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDR  101 (138)
T ss_dssp             TTTEEEEEEEEEECCCC--SSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCS
T ss_pred             CCCEEEEEEEEcCCCCC--CCCcCcEEEEEECCCCCccceeeeEECCCCCceEeeeEEEEeeehhccceEEEEEEeeecc
Confidence            45789999999999964  3578999999984    24578999999999999999999986532   459999999999


Q ss_pred             CCCCCeeEEEEEechhhhhhh
Q 031128           77 FSLDDKMGDAEFYITPFLEAL   97 (165)
Q Consensus        77 ~~~d~~iG~~~i~l~~l~~~~   97 (165)
                      ++++++||++.|+|.++....
T Consensus       102 ~~~~~~iG~~~i~L~~l~~~~  122 (138)
T d1wfma_         102 FSRHSVAGELRLGLDGTSVPL  122 (138)
T ss_dssp             SCTTSCSEEEEEESSSSSSCT
T ss_pred             cccceeeeEEEEEhHHccCCC
Confidence            999999999999999876543


No 15 
>d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82  E-value=7e-20  Score=122.42  Aligned_cols=92  Identities=26%  Similarity=0.417  Sum_probs=78.3

Q ss_pred             ccEEEEEEEEEeeCCCCCC-CC-CCCcEEEEEE---CCeEEecccccCCCCCeEecEEEEEEeCCC----CcEEEEEEeC
Q 031128            4 LMGLLRVHVLRGVNLAVRD-VV-SSDPYVVIKM---GKQKLKTRVVKNNVNPEWNEDLTLSISDSN----LPIKLTVYDK   74 (165)
Q Consensus         4 ~~g~L~V~v~~a~~L~~~~-~~-~~dpyv~v~~---~~~~~~T~~~~~~~~P~w~e~f~f~~~~~~----~~l~i~v~d~   74 (165)
                      ..+.|.|+|++|+||+..+ .+ .+||||++.+   ...+++|++++++.||.|||.|.|......    ..|.|+|||.
T Consensus        20 ~~~~L~V~V~~a~~L~~~d~~~~~~dpyV~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~l~~~~L~~~V~d~   99 (138)
T d1ugka_          20 ERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSF   99 (138)
T ss_dssp             GGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEE
T ss_pred             CCCEEEEEEEEecCCCCCCCCCCccceEEEEEEcCCCCEeEeCeeEeCCCCCceeeEEEEeeeCHHHcccceEEEEEEEC
Confidence            4568999999999999887 43 5799999998   456889999999999999999999743222    3599999999


Q ss_pred             CCCCCCCeeEEEEEechhhhh
Q 031128           75 DTFSLDDKMGDAEFYITPFLE   95 (165)
Q Consensus        75 ~~~~~d~~iG~~~i~l~~l~~   95 (165)
                      +.++++++||++.++|.++..
T Consensus       100 d~~~~~~~iG~~~i~L~~~~~  120 (138)
T d1ugka_         100 DRFSRDDIIGEVLIPLSGIEL  120 (138)
T ss_dssp             CSSCCCCCCEEEEEECTTCCC
T ss_pred             CCCCCCcEEEEEEEEcccccC
Confidence            999999999999999988743


No 16 
>d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.80  E-value=2.8e-19  Score=121.89  Aligned_cols=92  Identities=30%  Similarity=0.392  Sum_probs=79.5

Q ss_pred             ccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEECC-----eEEecccccCCCCCeEecEEEEEEeCCC---CcEEEEEEeC
Q 031128            4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK-----QKLKTRVVKNNVNPEWNEDLTLSISDSN---LPIKLTVYDK   74 (165)
Q Consensus         4 ~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~~-----~~~~T~~~~~~~~P~w~e~f~f~~~~~~---~~l~i~v~d~   74 (165)
                      ..+.|.|+|++|+||+..+ .+.+||||++++..     ..++|++++++.||.|||+|.|.+...+   ..|.|+|||.
T Consensus        23 ~~~~L~V~V~~a~~L~~~~~~~~~dpyV~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~F~v~~~~l~~~~l~i~v~d~  102 (157)
T d1uowa_          23 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDY  102 (157)
T ss_dssp             TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEEC
T ss_pred             CCCEEEEEEEEEEEcccccCCCCCCeeEEEEEecCCccccceecccccCCCCcccCCeEEEEecHHHcCccEEEEEEccc
Confidence            4578999999999999887 78999999999852     3458999999999999999999986543   3599999999


Q ss_pred             CCCCCCCeeEEEEEechhhhh
Q 031128           75 DTFSLDDKMGDAEFYITPFLE   95 (165)
Q Consensus        75 ~~~~~d~~iG~~~i~l~~l~~   95 (165)
                      +.++++++||++.|++.....
T Consensus       103 ~~~~~~~~iG~~~i~l~~~~~  123 (157)
T d1uowa_         103 DKIGKNDAIGKVFVGYNSTGA  123 (157)
T ss_dssp             CSSSCCCEEEEEEEETTCCHH
T ss_pred             CCCCCCceeEEEEEecccCCh
Confidence            999999999999999976543


No 17 
>d1bdya_ b.7.1.1 (A:) Domain from protein kinase C delta {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.80  E-value=3e-19  Score=116.97  Aligned_cols=111  Identities=16%  Similarity=0.267  Sum_probs=84.8

Q ss_pred             EEEEEEEeeCCCCCCCCCCCcEEEEEECC-----eEEecccccCCCCCeEecEEEEEEeCCCCcEEEEEEeCCCCCCCCe
Q 031128            8 LRVHVLRGVNLAVRDVVSSDPYVVIKMGK-----QKLKTRVVKNNVNPEWNEDLTLSISDSNLPIKLTVYDKDTFSLDDK   82 (165)
Q Consensus         8 L~V~v~~a~~L~~~~~~~~dpyv~v~~~~-----~~~~T~~~~~~~~P~w~e~f~f~~~~~~~~l~i~v~d~~~~~~d~~   82 (165)
                      +.|.+..+..++.. .+.+||||++++.+     ...+|++.++|.||.|||+|.|.+.+ ...|.|.|||++    +++
T Consensus         7 ~~~~~~~~~~~~~~-~~~~dPY~~v~l~~~~~~~~~~~t~~~kkT~nP~WnE~F~~~v~~-~~~l~i~V~d~d----d~~   80 (123)
T d1bdya_           7 ISFNSYELGSLQAE-DDASQPFCAVKMKEALTTDRGKTLVQKKPTMYPEWKSTFDAHIYE-GRVIQIVLMRAA----EDP   80 (123)
T ss_dssp             EEEEEEECCTTCCC-CCSCCCEEEEEEEEECCGGGTTBEEECSCCBCCCTTCEEEEECCT-TCEEEEEEEEET----TEE
T ss_pred             EEEEEeecccCCCC-CCCCCCEEEEEEcCccccccceEEEEeCCCCCcccceEEEEEEcc-ccEEEEEEEEcc----ccc
Confidence            34444444433332 67899999999963     23568888999999999999999865 456999999975    789


Q ss_pred             eEEEEEechhhhhhhcccccCCCCceEEEEEeeCCCccccccceeEEeCCcEEeeeeeeeccceeeeEEEEEEEEe
Q 031128           83 MGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLRNVEVGEVKIQLEWID  158 (165)
Q Consensus        83 iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~G~l~l~l~~~~  158 (165)
                      +|.+.+++..+......                                .....+.|++|+  ++|+|++.++|..
T Consensus        81 ~g~~~i~l~~l~~~~~~--------------------------------~~~~~~~W~~L~--~~Gkl~l~v~~f~  122 (123)
T d1bdya_          81 MSEVTVGVSVLAERCKK--------------------------------NNGKAEFWLDLQ--PQAKVLMCVQYFL  122 (123)
T ss_dssp             EEEEEEEHHHHHHHHHT--------------------------------TTTEEEEEEECB--SSCEEEEEEEEEE
T ss_pred             cCccEEehhheeecccc--------------------------------CCCcccEEEeCC--CCEEEEEEEEEec
Confidence            99999999998775432                                011348999997  7999999999964


No 18 
>d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.79  E-value=2.9e-19  Score=119.35  Aligned_cols=92  Identities=28%  Similarity=0.301  Sum_probs=74.4

Q ss_pred             ccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC--C---eEEecccccCCCCCeEecEEEEEEeCCC---CcEEEEEEeC
Q 031128            4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG--K---QKLKTRVVKNNVNPEWNEDLTLSISDSN---LPIKLTVYDK   74 (165)
Q Consensus         4 ~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~--~---~~~~T~~~~~~~~P~w~e~f~f~~~~~~---~~l~i~v~d~   74 (165)
                      ..+.|.|+|++|+||+..+ .+.+||||++++.  .   .+.+|++++++.||.|||+|.|.+....   ..|.|+|||+
T Consensus        13 ~~~~L~V~v~~a~~L~~~~~~~~~dpyvkv~l~~~~~~~~~~kT~~~~~t~~P~wne~f~F~v~~~~~~~~~l~i~v~d~   92 (138)
T d1w15a_          13 TTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDS   92 (138)
T ss_dssp             TTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEEC
T ss_pred             CCCEEEEEEEEeECCCCCCCCCCcCEEEEEEEeCCcccCccccceeECCCCCCeECcEEEEEecHHHhCccEEEEEEEeC
Confidence            3578999999999999888 7789999999983  2   3568999999999999999999986533   2489999999


Q ss_pred             CCCCCCCeeEEEEEechhhhh
Q 031128           75 DTFSLDDKMGDAEFYITPFLE   95 (165)
Q Consensus        75 ~~~~~d~~iG~~~i~l~~l~~   95 (165)
                      +.++++++||++.+++.....
T Consensus        93 ~~~~~~~~iG~~~i~l~~~~~  113 (138)
T d1w15a_          93 ERGSRNEVIGRLVLGATAEGS  113 (138)
T ss_dssp             CTTSCCEEEEEEEESTTCCSH
T ss_pred             CCCCCCCEEEEEEEcchhCCc
Confidence            999999999999999976543


No 19 
>d1dqva2 b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.73  E-value=8e-19  Score=118.07  Aligned_cols=93  Identities=29%  Similarity=0.418  Sum_probs=79.9

Q ss_pred             cccEEEEEEEEEeeCCCCCC-CCCCCcEEEEEECC-----eEEecccccCCCCCeEecEEEEEEeCC---CCcEEEEEEe
Q 031128            3 NLMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK-----QKLKTRVVKNNVNPEWNEDLTLSISDS---NLPIKLTVYD   73 (165)
Q Consensus         3 ~~~g~L~V~v~~a~~L~~~~-~~~~dpyv~v~~~~-----~~~~T~~~~~~~~P~w~e~f~f~~~~~---~~~l~i~v~d   73 (165)
                      ...|.|.|+|++|+||+..+ .+.+||||++++..     .+++|++++++.||.|||.|.|.+...   ...|.|.|||
T Consensus        17 ~~~~~L~V~V~~a~nL~~~~~~~~~dpyv~v~l~~~~~~~~~~kT~~~~~t~~P~wne~f~F~v~~~~~~~~~l~v~v~d   96 (145)
T d1dqva2          17 PTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVD   96 (145)
T ss_dssp             TTTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEE
T ss_pred             CCCCEEEEEEEEEeCCCCcCCCCCcCceEEEEEccCCccceeecCEEEeCCCCceecceEEEEEehhhcCCCEEEEEEEe
Confidence            34689999999999999887 77889999999863     357899999999999999999987643   2459999999


Q ss_pred             CCCCCCCCeeEEEEEechhhhh
Q 031128           74 KDTFSLDDKMGDAEFYITPFLE   95 (165)
Q Consensus        74 ~~~~~~d~~iG~~~i~l~~l~~   95 (165)
                      ++.++++++||++.|+++.+..
T Consensus        97 ~~~~~~~~~iG~~~i~l~~~~~  118 (145)
T d1dqva2          97 YDCIGHNEVIGVCRVGPEAADP  118 (145)
T ss_dssp             CCSSSCCEEEEECCCSSCTTCH
T ss_pred             cCCCCCCcEEEEEEECchHcCc
Confidence            9999999999999999987643


No 20 
>d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68  E-value=3e-16  Score=102.30  Aligned_cols=84  Identities=23%  Similarity=0.472  Sum_probs=63.3

Q ss_pred             EEEEEEEEeeCCCCCCCCCCCcEEEEEEC------CeEEeccc--ccCCCCCeEecE-EEE-EEeCCCC-cEEEEEEeCC
Q 031128            7 LLRVHVLRGVNLAVRDVVSSDPYVVIKMG------KQKLKTRV--VKNNVNPEWNED-LTL-SISDSNL-PIKLTVYDKD   75 (165)
Q Consensus         7 ~L~V~v~~a~~L~~~~~~~~dpyv~v~~~------~~~~~T~~--~~~~~~P~w~e~-f~f-~~~~~~~-~l~i~v~d~~   75 (165)
                      .|.|+|++|++|+...   .||||+|++-      ..+.+|++  ..++.||.|||+ |.| .+..++. .|.|.|||++
T Consensus         2 tl~V~Visaq~L~~~~---~dPyV~V~l~g~~~D~~~~~~t~~~~~~n~~nP~wne~~~~~~~~~~~~l~~L~f~V~D~d   78 (122)
T d2zkmx2           2 TLSITVISGQFLSERS---VRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVMEEG   78 (122)
T ss_dssp             EEEEEEEEEESCCSSC---CCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEEETT
T ss_pred             EEEEEEEEeeCCCCCC---CCcEEEEEEECcCCCCCccEEEEEEEeCCeecceEcccEeEEEecCCCcccEEEEEEECCC
Confidence            6899999999998654   7999999982      23344444  356799999976 444 3444443 4899999975


Q ss_pred             CCCCCCeeEEEEEechhhhhhh
Q 031128           76 TFSLDDKMGDAEFYITPFLEAL   97 (165)
Q Consensus        76 ~~~~d~~iG~~~i~l~~l~~~~   97 (165)
                          |++||++.++++.+..+.
T Consensus        79 ----~~~lG~~~ipl~~l~~Gy   96 (122)
T d2zkmx2          79 ----NKFLGHRIIPINALNSGY   96 (122)
T ss_dssp             ----TEEEEEEEEEGGGBCCEE
T ss_pred             ----CCEEEEEEEEcccCcCCc
Confidence                789999999998776644


No 21 
>d1e7ua2 b.7.1.1 (A:351-524) Phoshoinositide 3-kinase (PI3K) {Pig (Sus scrofa) [TaxId: 9823]}
Probab=96.78  E-value=0.011  Score=39.06  Aligned_cols=104  Identities=15%  Similarity=0.075  Sum_probs=64.6

Q ss_pred             EEEEEEEEEeeCCCCCCCCCCCcEEEEE--ECCeE---EecccccCCCCCeEecEEEEEEeC---C-CCcEEEEEEeCCC
Q 031128            6 GLLRVHVLRGVNLAVRDVVSSDPYVVIK--MGKQK---LKTRVVKNNVNPEWNEDLTLSISD---S-NLPIKLTVYDKDT   76 (165)
Q Consensus         6 g~L~V~v~~a~~L~~~~~~~~dpyv~v~--~~~~~---~~T~~~~~~~~P~w~e~f~f~~~~---~-~~~l~i~v~d~~~   76 (165)
                      ..++|+|..+.++........+-||.+.  .|.+.   .+|........+.|||.+.|++.-   | +..|.|+||+...
T Consensus         9 ~~f~i~i~~~~~~~~~~~~~~~l~V~~~ly~G~~~L~~~~tt~~~~~~~~~Wne~l~f~i~i~~LPr~arL~itiy~~~~   88 (174)
T d1e7ua2           9 RKFRVKIRGIDIPVLPRTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGAK   88 (174)
T ss_dssp             SEEEEEEEEEECSSCCTTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEEC
T ss_pred             CceEEEEEeccCccCCccCceEEEEEEEEEECCEEccCceeecCCCCCCceeeeEEEeccchhhCChhhEEEEEEEEecc
Confidence            4588999888755433233345676654  45443   234334445679999999998753   2 3459999997321


Q ss_pred             ----------------CCCCCeeEEEEEechhhhhhhcccccCCCCceEEEEEeeC
Q 031128           77 ----------------FSLDDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPS  116 (165)
Q Consensus        77 ----------------~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~  116 (165)
                                      -+....||.+.++|-+...       .+..|.....+.|.
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~lgw~n~~LFD~~~-------~L~~G~~~L~lWp~  137 (174)
T d1e7ua2          89 PALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHRF-------LLRHGEYVLHMWQL  137 (174)
T ss_dssp             --------------------CEEEEEEEESBCTTS-------BBCCEEEEEECEEC
T ss_pred             cccccccccccccccccCceeeEEEEeEEeEcCcC-------cEeccCEEEEecCC
Confidence                            1133489999999977655       34457766666653


No 22 
>d2yrba1 b.7.1.1 (A:596-737) Fantom {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.86  E-value=0.41  Score=30.09  Aligned_cols=95  Identities=15%  Similarity=0.146  Sum_probs=65.5

Q ss_pred             CCcccEEEEEEEEEeeCCCCC----CCCCCCcEEEEEECCeEEecccccCCCCCeEecEEEEEEeCCC--------CcEE
Q 031128            1 MENLMGLLRVHVLRGVNLAVR----DVVSSDPYVVIKMGKQKLKTRVVKNNVNPEWNEDLTLSISDSN--------LPIK   68 (165)
Q Consensus         1 ~~~~~g~L~V~v~~a~~L~~~----~~~~~dpyv~v~~~~~~~~T~~~~~~~~P~w~e~f~f~~~~~~--------~~l~   68 (165)
                      ++...+.+.+.|.++.--+..    +...+..||.+.+-.....+..+....+|.+|-+..|.+....        ..+.
T Consensus         5 l~~gEnlfEihi~~~~~s~e~l~~~~d~~p~tF~T~~Fyd~Etq~TPv~~g~~p~ynfts~Y~V~~d~~fl~YL~~~~~~   84 (142)
T d2yrba1           5 LERGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVRGLHPEYNFTSQYLVHVNDLFLQYIQKNTIT   84 (142)
T ss_dssp             CCSSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEESSSCCCCEEEEEEECCSHHHHHHHHHCCEE
T ss_pred             ecCCCcEEEEEEeeEEEcHHHHhhccCCCCcEEEEEEEEeeeeecCceecCCCCcceeEEEEEEccCHHHHHHHhhCCEE
Confidence            355677888888887421111    1223456888877665554555556779999998888886432        4599


Q ss_pred             EEEEeCCCCCCCCeeEEEEEechhhhhh
Q 031128           69 LTVYDKDTFSLDDKMGDAEFYITPFLEA   96 (165)
Q Consensus        69 i~v~d~~~~~~d~~iG~~~i~l~~l~~~   96 (165)
                      +++|..... .-..++.+.|.+.++.+.
T Consensus        85 lelhqa~g~-~~~tvA~g~i~l~~lLd~  111 (142)
T d2yrba1          85 LEVHQAYST-EYETIAACQLKFHEILEK  111 (142)
T ss_dssp             EEEEEECSS-CEEEEEEEEECCSHHHHC
T ss_pred             EEEEeecCC-CcceeEEEEEEhhHhhCc
Confidence            999987633 445899999999998874


No 23 
>d1d5ra1 b.7.1.1 (A:188-351) Pten tumor suppressor (Phoshphoinositide phosphatase), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.06  E-value=51  Score=19.78  Aligned_cols=80  Identities=15%  Similarity=0.068  Sum_probs=43.6

Q ss_pred             EEEEEEEeeCCCCCCCCCCCcEEEEEECCeEEecccccCCCCCeEecEEEEEEeC---CCCcEEEEEEeCCC-CCCCCee
Q 031128            8 LRVHVLRGVNLAVRDVVSSDPYVVIKMGKQKLKTRVVKNNVNPEWNEDLTLSISD---SNLPIKLTVYDKDT-FSLDDKM   83 (165)
Q Consensus         8 L~V~v~~a~~L~~~~~~~~dpyv~v~~~~~~~~T~~~~~~~~P~w~e~f~f~~~~---~~~~l~i~v~d~~~-~~~d~~i   83 (165)
                      |.+.-+.-+.+|..+.|.+.||+.+.-+..+.-|...... . .=...+.+.+..   -...+.+++|+.+. ..+.+.+
T Consensus         6 L~L~~I~l~~vP~f~~ggCrP~~~I~~~~~~v~ts~~~~~-~-~~~~~~~i~l~~~~~v~GDV~v~~yh~~~~~~~~~~m   83 (141)
T d1d5ra1           6 LLFHKMMFETIPMFSGGTCNPQFVVCQLKVKIYSSNSGPT-R-REDKFMYFEFPQPLPVCGDIKVEFFHKQNKMLKKDKM   83 (141)
T ss_dssp             EEEEEEEESSCCCSBTTBCCEEEEEEETTEEEEECCSSCS-E-EETTEEEEEEEEEEEEESEEEEEEEECCTTCSSCEEE
T ss_pred             EEEEEEEEECCCccCCCeeEEEEEEEcCCeEEEecCcEeE-e-ccccEEEEEeCCCCEEECCEEEEEEECCCCccCceEE
Confidence            4555555566666666678899999988765433322111 0 111223333321   13568999999653 3344555


Q ss_pred             EEEEEe
Q 031128           84 GDAEFY   89 (165)
Q Consensus        84 G~~~i~   89 (165)
                      =++.+.
T Consensus        84 F~~~Fn   89 (141)
T d1d5ra1          84 FHFWVN   89 (141)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            444444


Done!