BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031130
(165 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A6QQC0|AHSA2_BOVIN Activator of 90 kDa heat shock protein ATPase homolog 2 OS=Bos
taurus GN=AHSA2 PE=2 SV=1
Length = 260
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 27 WEEKSLNKWASDRIKELLTSVGSVEFSGGKAEITEVSNCVGDAFLVTVRNKKRVGYNYEL 86
W E+ W+ R++ELL + +VE G+ EI+E+ G+A + K ++ + YE
Sbjct: 27 WTERDATSWSKGRLRELLVGI-TVENEAGRCEISELKQVEGEASCSS--RKGKLIFFYEW 83
Query: 87 TLKVRGEWNIREEKKMVKGHIDIPEFS-FGELDDLQMQV 124
+K+ + IRE KG I+IP S E+DD ++ V
Sbjct: 84 NIKLGWKGIIRESGAKHKGLIEIPSLSEENEVDDTEVNV 122
>sp|O95433|AHSA1_HUMAN Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Homo
sapiens GN=AHSA1 PE=1 SV=1
Length = 338
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 78/140 (55%), Gaps = 13/140 (9%)
Query: 27 WEEKSLNKWASDRIKELLTSVGSVEFSGGKAEITEVSNCVGDAFLVTVRNKK-RVGYNYE 85
W E+ + W++D++K L +V V+ GK E+TEVS G+A ++ N+K ++ + YE
Sbjct: 27 WTERDASNWSTDKLKTLFLAV-QVQNEEGKCEVTEVSKLDGEA---SINNRKGKLIFFYE 82
Query: 86 LTLKVRGEWNIREEKKM-VKGHIDIPEFS-FGELDDLQMQVRISEEKDLSKEDKLQISQD 143
++K+ W + + KGH++IP S +D++++ V +++++ + L +
Sbjct: 83 WSVKLN--WTGTSKSGVQYKGHVEIPNLSDENSVDEVEISVSLAKDEPDTNLVALMKEEG 140
Query: 144 LKMFLQPVREKLLLFEQELK 163
+K+ +RE + ++ LK
Sbjct: 141 VKL----LREAMGIYISTLK 156
>sp|Q8BK64|AHSA1_MOUSE Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Mus
musculus GN=Ahsa1 PE=2 SV=2
Length = 338
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 71/123 (57%), Gaps = 15/123 (12%)
Query: 27 WEEKSLNKWASDRIKELLTSVGSVEFSGGKAEITEVSNCVGDAFLVTVRNKK-RVGYNYE 85
W E+ + W+++++K L +V VE GK E+TEV+ G+A ++ N+K ++ + YE
Sbjct: 27 WTERDASNWSTEKLKTLFLAV-RVENEEGKCEVTEVNKLDGEA---SINNRKGKLIFFYE 82
Query: 86 LTLKVRGEWNIREEKKM-VKGHIDIPEFS-FGELDDLQMQVRISEEKD------LSKEDK 137
T+K+ W + + KGH++IP S +D++++ V +++++ L KED
Sbjct: 83 WTIKLN--WTGTSKSGVQYKGHVEIPNLSDENSVDEVEISVSLAKDEPDTNLVALMKEDG 140
Query: 138 LQI 140
+++
Sbjct: 141 VKL 143
>sp|Q8N9S3|AHSA2_MOUSE Activator of 90 kDa heat shock protein ATPase homolog 2 OS=Mus
musculus GN=Ahsa2 PE=2 SV=2
Length = 331
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 27 WEEKSLNKWASDRIKELLTSVGSVEFSGGKAEITEVSNCVGDAFLVTVRNKKRVGYNYEL 86
W E+ W+ +++ELL + ++E G+ EI+E+ G+A + + K Y + +
Sbjct: 27 WTERDATIWSKGKLRELLVGI-AMENEAGRCEISELKQVEGEASCNSRKGKLIFFYEWNI 85
Query: 87 TLKVRGEWNIREEKKMVKGHIDIPEFS-FGELDDLQMQV 124
L +G ++E KG I+IP S E++D ++ V
Sbjct: 86 KLAWKG--TVKESGAKHKGLIEIPSLSEENEINDTEVNV 122
>sp|P53834|HCH1_YEAST Hsp90 co-chaperone HCH1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HCH1 PE=1 SV=1
Length = 153
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 27 WEEKSLNKWASDRIKELLTSVGSVEFSG-GKAEITEVSNCVGDAFLVTVRNKKRVGYNYE 85
W +K+ W+ D + LTS+ +V G K E+T+VS+ GD+ + + K ++ +
Sbjct: 11 WVDKNTLPWSKDYLNGKLTSLSTVSSDGKSKIELTQVSSITGDSNVSQRKGKPICYFDLQ 70
Query: 86 LTLKVRGEWNIREEKK-------MVKGHIDIPEFSFGELD 118
L++ V+ N+ K + G ++IPEF E D
Sbjct: 71 LSMNVKVT-NLDTNKDDEDDDGILADGKLEIPEFMHDESD 109
>sp|Q4A009|LYTS_STAS1 Sensor protein LytS OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=lytS
PE=3 SV=1
Length = 591
Score = 33.5 bits (75), Expect = 0.70, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 99 EKKMVKGHIDIPEFSFGELDDLQMQVRISEEKDLSKEDKLQISQDLKMFLQPVREKLLLF 158
E K ++ ++ P F F ++ + +RI EK ++E LQ+SQ + LQ R +
Sbjct: 379 EIKSLQAQVN-PHFFFNAINTISALIRIDSEK--ARELLLQLSQFFRSNLQGARNNTISL 435
Query: 159 EQELK 163
E+EL+
Sbjct: 436 EKELQ 440
>sp|Q5WL39|RHAAB_BACSK Bifunctional enzyme RhaA/RhaB OS=Bacillus clausii (strain KSM-K16)
GN=rhaAB PE=3 SV=1
Length = 894
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 9/120 (7%)
Query: 49 SVEFSGGKAEITEVSN----CVGDAFLVTVRNKKRVGYNYELTLKVRGEWNIREEKKMVK 104
SV S G + + N C A N+ VG + G W I+E ++++
Sbjct: 252 SVYISSGTWSLIGIENRTPICSQQAMAANFTNEGGVGSRIRFLKNIMGLWMIQEVQRLLP 311
Query: 105 GHIDIPEFSFGELDDLQMQVRISEEKDLSKEDKLQISQDLKMFLQPVREKLLLFEQELKD 164
GH +SF +L + + E D+ + L+ ++ Q REK L + D
Sbjct: 312 GH-----WSFSQLAQAASESTYTGEIDVDQHRFLKPENMIEEIQQACREKGLAVPESPGD 366
>sp|Q2LQK5|SYL_SYNAS Leucine--tRNA ligase OS=Syntrophus aciditrophicus (strain SB)
GN=leuS PE=3 SV=1
Length = 862
Score = 30.0 bits (66), Expect = 6.2, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 8 LSNKSQPATLGSVWNRAGTWEEKSLNKWASDRIKELLTSVGSVEFSGGKAEITEVSN-CV 66
++ K P + W R WEEK+ K D K+ + + GK I V N +
Sbjct: 1 MNRKYVPQEIEEKWQR--YWEEKNTFKVTEDPSKKKYYLLEMFPYPSGKIHIGHVRNYTI 58
Query: 67 GDAFLVTVRNKKRVGYN 83
GD V R K+ GYN
Sbjct: 59 GD---VVARYKRMEGYN 72
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,982,335
Number of Sequences: 539616
Number of extensions: 2387954
Number of successful extensions: 5609
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 5596
Number of HSP's gapped (non-prelim): 35
length of query: 165
length of database: 191,569,459
effective HSP length: 109
effective length of query: 56
effective length of database: 132,751,315
effective search space: 7434073640
effective search space used: 7434073640
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)