Query 031130
Match_columns 165
No_of_seqs 109 out of 333
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 15:16:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031130.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031130hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1usu_B AHA1; chaperone/complex 100.0 6.8E-47 2.3E-51 297.1 10.0 146 13-164 10-162 (170)
2 3n72_A Putative activator of H 100.0 2.3E-41 7.9E-46 264.2 7.1 139 20-164 10-151 (164)
3 2b3g_B Cellular tumor antigen 81.1 0.23 7.9E-06 26.7 -0.5 8 1-8 12-19 (28)
4 1y43_A Aspergillopepsin II lig 58.0 14 0.00048 21.5 3.6 27 88-114 5-31 (39)
5 2rp4_A Transcription factor P5 49.6 27 0.00093 23.1 4.4 50 111-163 13-66 (76)
6 2jvw_A Uncharacterized protein 19.8 47 0.0016 22.6 1.6 13 33-45 58-70 (88)
7 1sc0_A Hypothetical protein HI 19.8 1.4E+02 0.0046 21.0 4.3 22 64-86 97-118 (138)
8 3uv1_A DER F 7 allergen; super 18.2 3E+02 0.01 20.3 7.7 37 57-93 59-102 (196)
9 2pco_A Latarcin-1, LTC-1; cont 16.7 47 0.0016 17.6 0.8 15 151-165 7-21 (26)
10 3gek_A Putative thioesterase Y 15.4 2E+02 0.0067 20.5 4.3 23 64-87 92-114 (146)
No 1
>1usu_B AHA1; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.83.2.1 PDB: 1usv_B
Probab=100.00 E-value=6.8e-47 Score=297.08 Aligned_cols=146 Identities=23% Similarity=0.326 Sum_probs=113.8
Q ss_pred CCCcccceecCCC-CeeecCCChhHHHHHHHHhccCceeee--cCceEEEEEeeeeEeEEEEEeeeCcEEEEEEEEEEEE
Q 031130 13 QPATLGSVWNRAG-TWEEKSLNKWASDRIKELLTSVGSVEF--SGGKAEITEVSNCVGDAFLVTVRNKKRVGYNYELTLK 89 (165)
Q Consensus 13 ~~~~~~S~WN~n~-hWeEKd~t~Wak~~l~elL~~~~~~~~--~~~~~~i~~v~~v~GdA~v~~rkgKki~~ydl~i~l~ 89 (165)
+..+.+++||+|| ||+||||++||++||+++|.++. ++. +++.++|++|++|+|||+|++||||+|++|||+|+|+
T Consensus 10 ~~~~~~d~~NvNNWHWeEKn~t~Wak~~lkelL~~~~-~e~~~~~~~~~i~~V~~v~GDA~V~~RKGK~i~~yD~~i~l~ 88 (170)
T 1usu_B 10 HGMASMVVNNPNNWHWVDKNCIGWAKEYFKQKIVGVE-AGSVKDKKYAKIKSVSSIEGDCEVNQRKGKVISLFDLKITVL 88 (170)
T ss_dssp ----------------CCEETHHHHHHHHHHHHTTCB-C-----CCEEEECCCCEEEEECEECCC-CCCCCCCEEEEEEE
T ss_pred cccccccCCCCcccccccCCCCHHHHHHHHHHhccCE-eeccCCCcEEEEEEeeEEeeEEEEEEecCcEEEEEEEEEEEE
Confidence 6788999999999 99999999999999999999998 988 8889999999999999999999999999999999999
Q ss_pred EEEEEeecCCeee---EEEEEEcccccCC-CCCceEEEEEEecCCCcchHhHHHHHHHhhhcHHHHHHHHHHHHHHHhh
Q 031130 90 VRGEWNIREEKKM---VKGHIDIPEFSFG-ELDDLQMQVRISEEKDLSKEDKLQISQDLKMFLQPVREKLLLFEQELKD 164 (165)
Q Consensus 90 w~g~~~~~~~~~~---~~G~i~ipe~s~~-~~dd~ei~v~~~~~~~~~~~~k~~l~~~~~~~~~~ir~~l~~f~~eL~~ 164 (165)
|+|... +++.. ++|+|+|||||++ ++|||+|+|+++++++..+.++.++| +.++|+||++|.+|+++|++
T Consensus 89 w~g~~~--~~~~~~~~v~G~i~IPe~s~d~~~dd~e~~v~~~~~~~~~~~~k~~vr---~~~~p~lr~~l~~f~~eL~~ 162 (170)
T 1usu_B 89 IEGHVD--SKDGSALPFEGSINVPEVAFDSEASSYQFDISIFKETSELSEAKPLIR---SELLPKLRQIFQQFGKDLLA 162 (170)
T ss_dssp EEEECC--C----CCEEEEEEEEEEEETTCCGGGCCCEEEETTCCTTSTTHHHHHH---HHTHHHHHHHHHHHHHHHHH
T ss_pred EEEEEC--CCCccceeeEEEEEeccccCCCCCcccEEEEEEccCCchHHHHHHHHH---HHhHHHHHHHHHHHHHHHHH
Confidence 999852 24456 9999999999994 57899999999888776667677777 99999999999999999986
No 2
>3n72_A Putative activator of HSP90; malaria, structural genomics, heat shock, structural genomic consortium, SGC, chaperone activator; 1.77A {Plasmodium falciparum}
Probab=100.00 E-value=2.3e-41 Score=264.25 Aligned_cols=139 Identities=21% Similarity=0.246 Sum_probs=110.2
Q ss_pred eecCCCCeeecCCChhHHHHHHHHhccCceeeecCceEEEEEeeeeEeEEEEEeeeCcEEEEEEEEEEEEEEEEEeecCC
Q 031130 20 VWNRAGTWEEKSLNKWASDRIKELLTSVGSVEFSGGKAEITEVSNCVGDAFLVTVRNKKRVGYNYELTLKVRGEWNIREE 99 (165)
Q Consensus 20 ~WN~n~hWeEKd~t~Wak~~l~elL~~~~~~~~~~~~~~i~~v~~v~GdA~v~~rkgKki~~ydl~i~l~w~g~~~~~~~ 99 (165)
--|.|+||+||||++||++||+++|.++. ++.+++.++|+. .+|+|||+|++||||+||+|||+|+|+|+|... +++
T Consensus 10 ~~~nNWHW~EKn~t~Wak~~lkelL~~l~-~e~~~~~~~i~~-~~veGDA~V~~RKGK~I~~yDl~i~l~w~g~~~-~~~ 86 (164)
T 3n72_A 10 GRENLYFQGERNYNKWAESYIKYNLSNLK-IEKEDLTIYFDN-LQVSGNACVSIRKGKQINSFEYIIKFEWLYSKK-KEG 86 (164)
T ss_dssp HHHHHHCCCCEECHHHHHHHHHHHHHTCE-EC----CEEEEE-EEEEEEEEEEEETTEEEEEEEEEEEEEEEEC------
T ss_pred CCCCCCcccccCCCHHHHHHHHHHhcccE-eecCCeEEEEEE-EEEEeEEEEEEecCcEEEEEEEEEEEEEEEEec-CCC
Confidence 33444499999999999999999999998 887788899999 599999999999999999999999999999753 244
Q ss_pred eeeEEEEEEcccccCC--CCCceEEEEEEecCCCcchHhHHHHHHHh-hhcHHHHHHHHHHHHHHHhh
Q 031130 100 KKMVKGHIDIPEFSFG--ELDDLQMQVRISEEKDLSKEDKLQISQDL-KMFLQPVREKLLLFEQELKD 164 (165)
Q Consensus 100 ~~~~~G~i~ipe~s~~--~~dd~ei~v~~~~~~~~~~~~k~~l~~~~-~~~~~~ir~~l~~f~~eL~~ 164 (165)
+..++|+|+|||||++ ++|||+|+|++.++++..+.+ +...| +.|+|+||++|.+|+++|++
T Consensus 87 ~~~~~G~i~IPe~s~dn~e~dd~ei~vs~~~~~~~~~~~---~~~lvr~~~~~~lr~~L~~f~~~L~~ 151 (164)
T 3n72_A 87 KDYFGGSVEIPDFSTFSLEENDYAINIERTDESENLRFI---YDSILKKEGKEKIKECLKNFQEDLLK 151 (164)
T ss_dssp --CEEEEEEEEEEETTHHHHTCCCCEEC--CCSHHHHHH---HHHTTTTHHHHHHHHHHTTHHHHHHH
T ss_pred CcEEeEEEEeceecCCCCcccceEEEEEEccCCccHHHH---HHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 5679999999999996 568999999998765533332 22234 99999999999999999986
No 3
>2b3g_B Cellular tumor antigen P53; OB-fold, ssDNA mimicry, replication; 1.60A {Homo sapiens}
Probab=81.10 E-value=0.23 Score=26.67 Aligned_cols=8 Identities=88% Similarity=1.194 Sum_probs=6.8
Q ss_pred CCCccccc
Q 031130 1 MLSPDDIL 8 (165)
Q Consensus 1 ~~~~~~~~ 8 (165)
|||||||-
T Consensus 12 mlspddi~ 19 (28)
T 2b3g_B 12 MLSPDDIE 19 (28)
T ss_dssp GCCHHHHH
T ss_pred hcChHHHH
Confidence 89999984
No 4
>1y43_A Aspergillopepsin II light chain; proctase A, beta sandwich structure, hydrolase; 1.40A {Aspergillus niger var} SCOP: b.29.1.20
Probab=58.00 E-value=14 Score=21.54 Aligned_cols=27 Identities=22% Similarity=0.254 Sum_probs=21.5
Q ss_pred EEEEEEEeecCCeeeEEEEEEcccccC
Q 031130 88 LKVRGEWNIREEKKMVKGHIDIPEFSF 114 (165)
Q Consensus 88 l~w~g~~~~~~~~~~~~G~i~ipe~s~ 114 (165)
-+|.|-+..+..-..++|++++|..+.
T Consensus 5 sNWaGAVl~g~~~t~VsgtftVP~~s~ 31 (39)
T 1y43_A 5 SNWAGAVLIGDGYTKVTGEFTVPSVSA 31 (39)
T ss_dssp SSEEEEEEECSCEEEEEEEEECCCCBC
T ss_pred ccceEEEecCCCeEEEEEEEECCcccC
Confidence 468887654566778999999999887
No 5
>2rp4_A Transcription factor P53; DMP53, oligomerization domain, tetramerizaiton domain, nucleus; NMR {Drosophila melanogaster}
Probab=49.64 E-value=27 Score=23.07 Aligned_cols=50 Identities=16% Similarity=0.098 Sum_probs=28.8
Q ss_pred cccCCCCCceEEEEEEecCCCcchHhHHHHHHHhhhcHHHHH----HHHHHHHHHHh
Q 031130 111 EFSFGELDDLQMQVRISEEKDLSKEDKLQISQDLKMFLQPVR----EKLLLFEQELK 163 (165)
Q Consensus 111 e~s~~~~dd~ei~v~~~~~~~~~~~~k~~l~~~~~~~~~~ir----~~l~~f~~eL~ 163 (165)
++|-..+.||...|++..+.=.-+.+...|+ +.....+| ..|.+|.+.|.
T Consensus 13 ~VsRt~dGdYrL~itcpkKe~LLqSIEgmik---~aA~~vLRnP~~~kLr~~an~Ll 66 (76)
T 2rp4_A 13 NVSRTPDGDYRLAITCPNKEWLLQSIEGMIK---EAAAEVLRNPNQENLRRHANKLL 66 (76)
T ss_dssp EEECCTTTBEEEEEEESCHHHHHHHHHHHHH---HHHHHHHHCTTCHHHHHHHHHHH
T ss_pred eeeeccCCceEEEEEeCcHHHHHHHHHHHHH---HHHHHHHhCCcHHHHHHHHHHHH
Confidence 3444445699999998654322222222334 55555666 57888877663
No 6
>2jvw_A Uncharacterized protein; solution structure, alpha helical protein, structural GE unknown function, PSI-2, protein structure initiative; NMR {Vibrio fischeri}
Probab=19.84 E-value=47 Score=22.62 Aligned_cols=13 Identities=23% Similarity=0.808 Sum_probs=11.1
Q ss_pred ChhHHHHHHHHhc
Q 031130 33 NKWASDRIKELLT 45 (165)
Q Consensus 33 t~Wak~~l~elL~ 45 (165)
|+||+++.+.+..
T Consensus 58 TpWAR~KVE~lYL 70 (88)
T 2jvw_A 58 TDWARERVENIYL 70 (88)
T ss_dssp SHHHHHHHHHHHH
T ss_pred CHhHHHHHHHHHH
Confidence 7999999998764
No 7
>1sc0_A Hypothetical protein HI1161; structural genomics, unknown function, PSI-2, protein structure initiative; 1.70A {Haemophilus influenzae} SCOP: d.38.1.5 PDB: 2b6e_A 3lz7_A
Probab=19.79 E-value=1.4e+02 Score=21.01 Aligned_cols=22 Identities=5% Similarity=0.006 Sum_probs=17.7
Q ss_pred eeEeEEEEEeeeCcEEEEEEEEE
Q 031130 64 NCVGDAFLVTVRNKKRVGYNYEL 86 (165)
Q Consensus 64 ~v~GdA~v~~rkgKki~~ydl~i 86 (165)
.+..+|.+ .++||.+..++.+|
T Consensus 97 ~l~a~a~v-~~~Gr~~~~~~~~i 118 (138)
T 1sc0_A 97 KVTARATP-INLGRNIQVWQIDI 118 (138)
T ss_dssp EEEEEEEE-EEECSSEEEEEEEE
T ss_pred cEEEEEEE-EEcCCCEEEEEEEE
Confidence 45678888 89999999887665
No 8
>3uv1_A DER F 7 allergen; super-roll; 2.00A {Dermatophagoides farinae}
Probab=18.19 E-value=3e+02 Score=20.30 Aligned_cols=37 Identities=11% Similarity=0.024 Sum_probs=22.5
Q ss_pred EEEEEeeee--EeEEEEEeeeCcEEEEEEE-----EEEEEEEEE
Q 031130 57 AEITEVSNC--VGDAFLVTVRNKKRVGYNY-----ELTLKVRGE 93 (165)
Q Consensus 57 ~~i~~v~~v--~GdA~v~~rkgKki~~ydl-----~i~l~w~g~ 93 (165)
..++.++++ .|+|.+.+..+.....-++ .+.+.|+..
T Consensus 59 g~l~GLSs~~R~Gd~~~~~~~~~~~~~~~vg~~~~~v~~~y~~~ 102 (196)
T 3uv1_A 59 IEARGLKQMKRQGDANVKGEEGIVKAHLLIGVHDDIVSMEYDLA 102 (196)
T ss_dssp EEEECGGGEEESSSCEEEEETTEEEEEEEEEESSSCEEEEEEEE
T ss_pred EEEEccccEEEccceEEEEcCCeEEEEEEeeeceeEEEEEEEEE
Confidence 456666666 7899987766665544444 344555544
No 9
>2pco_A Latarcin-1, LTC-1; continuous helix, toxin; NMR {Synthetic}
Probab=16.72 E-value=47 Score=17.55 Aligned_cols=15 Identities=33% Similarity=0.423 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHhhC
Q 031130 151 VREKLLLFEQELKDR 165 (165)
Q Consensus 151 ir~~l~~f~~eL~~r 165 (165)
+++.|..|.+.|++|
T Consensus 7 ~keklKkf~~~lk~k 21 (26)
T 2pco_A 7 WRRKLKKLRNALKKK 21 (26)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 456666666666653
No 10
>3gek_A Putative thioesterase YHDA; structure genomics, NESG, KR113, Q9CHK5_lacla, lactococcus L YHDA, structural genomics, PSI-2; 2.24A {Lactococcus lactis subsp}
Probab=15.36 E-value=2e+02 Score=20.49 Aligned_cols=23 Identities=13% Similarity=0.159 Sum_probs=18.3
Q ss_pred eeEeEEEEEeeeCcEEEEEEEEEE
Q 031130 64 NCVGDAFLVTVRNKKRVGYNYELT 87 (165)
Q Consensus 64 ~v~GdA~v~~rkgKki~~ydl~i~ 87 (165)
.+..+|.+ .++|+.++.|+.+|.
T Consensus 92 ~l~a~a~v-~~~Gr~~~~~~v~i~ 114 (146)
T 3gek_A 92 FVNARGLL-LKNGKRNHVWEIKIT 114 (146)
T ss_dssp EEEEEEEE-EEECSSEEEEEEEEE
T ss_pred EEEEEEEE-EECCCcEEEEEEEEE
Confidence 46788888 889999988876654
Done!