BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031132
(165 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P92963|RAB1C_ARATH Ras-related protein RABB1c OS=Arabidopsis thaliana GN=RABB1C PE=2
SV=1
Length = 211
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 162/164 (98%), Positives = 163/164 (99%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ
Sbjct: 47 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 106
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT
Sbjct: 107 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 166
Query: 121 IYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGSSSQAGGCC 164
IYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGS+SQ GGCC
Sbjct: 167 IYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210
>sp|Q38922|RAB1B_ARATH Ras-related protein RABB1b OS=Arabidopsis thaliana GN=RABB1B PE=2
SV=1
Length = 211
Score = 295 bits (754), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 137/164 (83%), Positives = 151/164 (92%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
M+T+D +PIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ
Sbjct: 47 MVTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 106
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
HAN NM+IMLIGNKCDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TAA
Sbjct: 107 HANPNMSIMLIGNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAK 166
Query: 121 IYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGSSSQAGGCC 164
I + IQDGVFDVSNES GIK+GYG G +GGRDG+ SQ GGCC
Sbjct: 167 ILQNIQDGVFDVSNESSGIKIGYGRTQGAAGGRDGTISQGGGCC 210
>sp|P49104|RAB2B_MAIZE Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1
Length = 210
Score = 290 bits (742), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 139/147 (94%), Positives = 142/147 (96%), Gaps = 1/147 (0%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ
Sbjct: 47 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 106
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
HANANMTIML+GNKCDL+HRRAVS EEGEQFAKEHGLIFMEASAKTAQNVEEAF+KTA
Sbjct: 107 HANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGA 166
Query: 121 IYKKIQDGVFDVSNESYGIKVGYGGIP 147
IYKKIQDGVFDVSNESYGIKVGY IP
Sbjct: 167 IYKKIQDGVFDVSNESYGIKVGY-AIP 192
>sp|P49103|RAB2A_MAIZE Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1
Length = 209
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 136/143 (95%), Positives = 139/143 (97%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
MI IDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ
Sbjct: 47 MINIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 106
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
HANANMTIML+GNKCDL+HRRAVS EEGEQFAKEHGLIFMEASAKTAQNVEEAF+KTA
Sbjct: 107 HANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGA 166
Query: 121 IYKKIQDGVFDVSNESYGIKVGY 143
IYKKIQDGVFDVSNESYGIKVGY
Sbjct: 167 IYKKIQDGVFDVSNESYGIKVGY 189
>sp|P36863|YPTV4_VOLCA GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1
Length = 213
Score = 281 bits (720), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/167 (82%), Positives = 145/167 (86%), Gaps = 3/167 (1%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
MI ID K IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ
Sbjct: 47 MINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 106
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
HAN NMTIMLIGNKCDL HRRAV+TEEGEQFAKEHGLIF+E SA+TA NVEEAFI TA
Sbjct: 107 HANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKE 166
Query: 121 IYKKIQDGVFDVSNESYGIKVGYG-GIPGPSGGR--DGSSSQAGGCC 164
IYKKIQDGVFDVSNESYGIKVGYG G GP + +G + ++ CC
Sbjct: 167 IYKKIQDGVFDVSNESYGIKVGYGAGNAGPQAAKPGEGDARKSSSCC 213
>sp|Q39570|YPTC4_CHLRE GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4
PE=3 SV=1
Length = 213
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 137/167 (82%), Positives = 146/167 (87%), Gaps = 3/167 (1%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
MI ID K IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ
Sbjct: 47 MINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 106
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
HAN NMTIMLIGNKCDL HRRAV+TEEGEQFAKEHGLIF+E SA+TA NVEEAFI TA
Sbjct: 107 HANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKE 166
Query: 121 IYKKIQDGVFDVSNESYGIKVGY-GGIPGPSGGR--DGSSSQAGGCC 164
IYKKIQDGVFDVSNESYGIKVGY GG GP + +G ++++ CC
Sbjct: 167 IYKKIQDGVFDVSNESYGIKVGYGGGNAGPQTVKPGEGGAAKSSSCC 213
>sp|O23561|RAB1A_ARATH Ras-related protein RABB1a OS=Arabidopsis thaliana GN=RABB1A PE=2
SV=1
Length = 205
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/164 (78%), Positives = 139/164 (84%), Gaps = 8/164 (4%)
Query: 2 ITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH 61
ITIDNKPIKLQIWDTAGQESFRS+TRSYYRG AG LLVYDITRRETFNHLASWLE+ARQH
Sbjct: 48 ITIDNKPIKLQIWDTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQH 107
Query: 62 ANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATI 121
A+ NMT MLIGNKCDL +R VSTEEGEQFA+EHGLIFMEASAKTA NVEEAF++TAATI
Sbjct: 108 ASENMTTMLIGNKCDLEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATI 167
Query: 122 YKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGSSSQA-GGCC 164
YK+IQDGV D +NE G PGP GG+D SSSQ GCC
Sbjct: 168 YKRIQDGVVDEANEP-------GITPGPFGGKDASSSQQRRGCC 204
>sp|Q05975|RAB2_LYMST Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1
Length = 212
Score = 242 bits (617), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 115/142 (80%), Positives = 125/142 (88%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
MITID K IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL +WLEDARQ
Sbjct: 47 MITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQ 106
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
H+N+NM IMLIGNK DL RR V EEGE FA+EHGLIFME SAKTA NVEEAFI TA
Sbjct: 107 HSNSNMVIMLIGNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKE 166
Query: 121 IYKKIQDGVFDVSNESYGIKVG 142
IY+KIQDGVFD++NE+ GIK+G
Sbjct: 167 IYQKIQDGVFDINNEANGIKIG 188
>sp|P53994|RAB2A_MOUSE Ras-related protein Rab-2A OS=Mus musculus GN=Rab2a PE=1 SV=1
Length = 212
Score = 242 bits (617), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 120/166 (72%), Positives = 132/166 (79%), Gaps = 2/166 (1%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
MITID K IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL +WLEDARQ
Sbjct: 47 MITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQ 106
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
H+N+NM IMLIGNK DL RR V EEGE FA+EHGLIFME SAKTA NVEEAFI TA
Sbjct: 107 HSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKE 166
Query: 121 IYKKIQDGVFDVSNESYGIKVG--YGGIPGPSGGRDGSSSQAGGCC 164
IY+KIQ+GVFD++NE+ GIK+G + G G GGCC
Sbjct: 167 IYEKIQEGVFDINNEANGIKIGPQHAATNASHGSNQGGQQAGGGCC 212
>sp|P36409|RAB2A_DICDI Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A
PE=2 SV=2
Length = 207
Score = 241 bits (616), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 116/166 (69%), Positives = 137/166 (82%), Gaps = 7/166 (4%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
MITIDNK IKLQIWDTAGQESFRSITRSYYRG+AGALLVYDITRR+TFNHL WL+DAR
Sbjct: 46 MITIDNKAIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARS 105
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
+AN+NMTI+LIGNK D+ +RAVS EEG QFA E+GLIF+E SAKTA NVEEAF+ TA+
Sbjct: 106 YANSNMTIILIGNKSDMESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASK 165
Query: 121 IYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGSSSQ--AGGCC 164
IY+KIQ G FD++NES+GIK+G P+ +DG+ + GGCC
Sbjct: 166 IYEKIQKGDFDINNESFGIKLG-----APTSKQDGTDQKPAGGGCC 206
>sp|Q90965|RAB2A_CHICK Ras-related protein Rab-2A OS=Gallus gallus GN=RAB2A PE=2 SV=1
Length = 212
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/142 (80%), Positives = 125/142 (88%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
MITID K IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL +WLEDARQ
Sbjct: 47 MITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQ 106
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
H+N+NM IMLIGNK DL RR V EEGE FA+EHGLIFME SAKTA NVEEAFI TA
Sbjct: 107 HSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKE 166
Query: 121 IYKKIQDGVFDVSNESYGIKVG 142
IY+KIQ+GVFD++NE+ GIK+G
Sbjct: 167 IYEKIQEGVFDINNEANGIKIG 188
>sp|P05712|RAB2A_RAT Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=1 SV=1
Length = 212
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/142 (80%), Positives = 125/142 (88%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
MITID K IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL +WLEDARQ
Sbjct: 47 MITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQ 106
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
H+N+NM IMLIGNK DL RR V EEGE FA+EHGLIFME SAKTA NVEEAFI TA
Sbjct: 107 HSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKE 166
Query: 121 IYKKIQDGVFDVSNESYGIKVG 142
IY+KIQ+GVFD++NE+ GIK+G
Sbjct: 167 IYEKIQEGVFDINNEANGIKIG 188
>sp|Q5R6B6|RAB2A_PONAB Ras-related protein Rab-2A OS=Pongo abelii GN=RAB2A PE=2 SV=1
Length = 212
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/142 (80%), Positives = 125/142 (88%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
MITID K IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL +WLEDARQ
Sbjct: 47 MITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQ 106
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
H+N+NM IMLIGNK DL RR V EEGE FA+EHGLIFME SAKTA NVEEAFI TA
Sbjct: 107 HSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKE 166
Query: 121 IYKKIQDGVFDVSNESYGIKVG 142
IY+KIQ+GVFD++NE+ GIK+G
Sbjct: 167 IYEKIQEGVFDINNEANGIKIG 188
>sp|Q4R4X6|RAB2A_MACFA Ras-related protein Rab-2A OS=Macaca fascicularis GN=RAB2A PE=2
SV=1
Length = 212
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/142 (80%), Positives = 125/142 (88%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
MITID K IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL +WLEDARQ
Sbjct: 47 MITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQ 106
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
H+N+NM IMLIGNK DL RR V EEGE FA+EHGLIFME SAKTA NVEEAFI TA
Sbjct: 107 HSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKE 166
Query: 121 IYKKIQDGVFDVSNESYGIKVG 142
IY+KIQ+GVFD++NE+ GIK+G
Sbjct: 167 IYEKIQEGVFDINNEANGIKIG 188
>sp|P61019|RAB2A_HUMAN Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2A PE=1 SV=1
Length = 212
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/142 (80%), Positives = 125/142 (88%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
MITID K IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL +WLEDARQ
Sbjct: 47 MITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQ 106
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
H+N+NM IMLIGNK DL RR V EEGE FA+EHGLIFME SAKTA NVEEAFI TA
Sbjct: 107 HSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKE 166
Query: 121 IYKKIQDGVFDVSNESYGIKVG 142
IY+KIQ+GVFD++NE+ GIK+G
Sbjct: 167 IYEKIQEGVFDINNEANGIKIG 188
>sp|P61105|RAB2A_CANFA Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1
Length = 212
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/142 (80%), Positives = 125/142 (88%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
MITID K IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL +WLEDARQ
Sbjct: 47 MITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQ 106
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
H+N+NM IMLIGNK DL RR V EEGE FA+EHGLIFME SAKTA NVEEAFI TA
Sbjct: 107 HSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKE 166
Query: 121 IYKKIQDGVFDVSNESYGIKVG 142
IY+KIQ+GVFD++NE+ GIK+G
Sbjct: 167 IYEKIQEGVFDINNEANGIKIG 188
>sp|Q01971|RAB2A_RABIT Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2
SV=1
Length = 212
Score = 240 bits (613), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 114/142 (80%), Positives = 125/142 (88%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
MITID K IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL +WLEDARQ
Sbjct: 47 MITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQ 106
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
H+N+NM IMLIGNK DL RR V EEGE FA+EHGLIFME SAKTA NVEEAFI TA
Sbjct: 107 HSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKE 166
Query: 121 IYKKIQDGVFDVSNESYGIKVG 142
IY+KIQ+GVFD++NE+ GIK+G
Sbjct: 167 IYEKIQEGVFDINNEANGIKIG 188
>sp|Q8WUD1|RAB2B_HUMAN Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1
Length = 216
Score = 238 bits (608), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/170 (70%), Positives = 130/170 (76%), Gaps = 6/170 (3%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
M+ ID K IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQ
Sbjct: 47 MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ 106
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
H+++NM IMLIGNK DL RR V EEGE FA+EHGLIFME SAKTA NVEEAFI TA
Sbjct: 107 HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE 166
Query: 121 IYKKIQDGVFDVSNESYGIKVG----YGGIPGPSGGRDGSSS--QAGGCC 164
IY+KIQ G+FDV NE+ GIK+G GPS + S GCC
Sbjct: 167 IYRKIQQGLFDVHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC 216
>sp|P59279|RAB2B_MOUSE Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1
Length = 216
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/142 (78%), Positives = 122/142 (85%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
M+ ID K IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQ
Sbjct: 47 MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ 106
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
H+++NM IMLIGNK DL RR V EEGE FA+EHGLIFME SAKTA NVEEA+I TA
Sbjct: 107 HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKE 166
Query: 121 IYKKIQDGVFDVSNESYGIKVG 142
IY+KIQ G+FDV NE+ GIK+G
Sbjct: 167 IYRKIQQGLFDVHNEANGIKIG 188
>sp|P61107|RAB14_RAT Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=1 SV=3
Length = 215
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 118/165 (71%), Gaps = 5/165 (3%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
+I + + IKLQIWDTAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL DAR
Sbjct: 52 IIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARN 111
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
N N I+LIGNK DL +R V+ EE +QFA+E+GL+F+EASAKT +NVE+AF++ A
Sbjct: 112 LTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKK 171
Query: 121 IYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGSSSQAG--GC 163
IY+ IQDG D++ G++ P GGR S Q GC
Sbjct: 172 IYQNIQDGSLDLNAAESGVQ---HKPSAPQGGRLTSEPQPQREGC 213
>sp|Q52NJ6|RAB14_PIG Ras-related protein Rab-14 OS=Sus scrofa GN=RAB14 PE=2 SV=3
Length = 215
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 118/165 (71%), Gaps = 5/165 (3%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
+I + + IKLQIWDTAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL DAR
Sbjct: 52 IIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARN 111
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
N N I+LIGNK DL +R V+ EE +QFA+E+GL+F+EASAKT +NVE+AF++ A
Sbjct: 112 LTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKK 171
Query: 121 IYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGSSSQAG--GC 163
IY+ IQDG D++ G++ P GGR S Q GC
Sbjct: 172 IYQNIQDGSLDLNAAESGVQ---HKPSAPQGGRLTSEPQPQREGC 213
>sp|Q5R8Z8|RAB14_PONAB Ras-related protein Rab-14 OS=Pongo abelii GN=RAB14 PE=2 SV=3
Length = 215
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 118/165 (71%), Gaps = 5/165 (3%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
+I + + IKLQIWDTAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL DAR
Sbjct: 52 IIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARN 111
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
N N I+LIGNK DL +R V+ EE +QFA+E+GL+F+EASAKT +NVE+AF++ A
Sbjct: 112 LTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKK 171
Query: 121 IYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGSSSQAG--GC 163
IY+ IQDG D++ G++ P GGR S Q GC
Sbjct: 172 IYQNIQDGSLDLNAAESGVQ---HKPSAPQGGRLTSEPQPQREGC 213
>sp|Q91V41|RAB14_MOUSE Ras-related protein Rab-14 OS=Mus musculus GN=Rab14 PE=1 SV=3
Length = 215
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 118/165 (71%), Gaps = 5/165 (3%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
+I + + IKLQIWDTAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL DAR
Sbjct: 52 IIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARN 111
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
N N I+LIGNK DL +R V+ EE +QFA+E+GL+F+EASAKT +NVE+AF++ A
Sbjct: 112 LTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKK 171
Query: 121 IYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGSSSQAG--GC 163
IY+ IQDG D++ G++ P GGR S Q GC
Sbjct: 172 IYQNIQDGSLDLNAAESGVQ---HKPSAPQGGRLTSEPQPQREGC 213
>sp|P61106|RAB14_HUMAN Ras-related protein Rab-14 OS=Homo sapiens GN=RAB14 PE=1 SV=4
Length = 215
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 118/165 (71%), Gaps = 5/165 (3%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
+I + + IKLQIWDTAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL DAR
Sbjct: 52 IIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARN 111
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
N N I+LIGNK DL +R V+ EE +QFA+E+GL+F+EASAKT +NVE+AF++ A
Sbjct: 112 LTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKK 171
Query: 121 IYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGSSSQAG--GC 163
IY+ IQDG D++ G++ P GGR S Q GC
Sbjct: 172 IYQNIQDGSLDLNAAESGVQ---HKPSAPQGGRLTSEPQPQREGC 213
>sp|Q5ZKU5|RAB14_CHICK Ras-related protein Rab-14 OS=Gallus gallus GN=RAB14 PE=2 SV=3
Length = 215
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 118/165 (71%), Gaps = 5/165 (3%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
+I + + IKLQIWDTAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL DAR
Sbjct: 52 IIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARN 111
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
N N I+LIGNK DL +R V+ EE +QFA+E+GL+F+EASAKT +NVE+AF++ A
Sbjct: 112 LTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKK 171
Query: 121 IYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGSSSQAG--GC 163
IY+ IQDG D++ G++ P GGR S Q GC
Sbjct: 172 IYQNIQDGSLDLNAAESGVQ---HKPSAPQGGRLTSEPQPQREGC 213
>sp|P36410|RAB14_DICDI Ras-related protein Rab-14 OS=Dictyostelium discoideum GN=rab14
PE=1 SV=2
Length = 206
Score = 182 bits (462), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 84/132 (63%), Positives = 106/132 (80%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
++ ++NK IKLQIWDTAGQE FR++TRSYYRGAAGALLVYDITRR T+NHL +WL DAR
Sbjct: 49 IVDVNNKKIKLQIWDTAGQERFRAVTRSYYRGAAGALLVYDITRRITYNHLTTWLTDARN 108
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
N N IMLIGNK DL +R V+ EE FAK++GLIF+E+SAKT +NVEEAF++TA
Sbjct: 109 LTNPNTVIMLIGNKKDLEGQRDVTYEEASAFAKQNGLIFVESSAKTGENVEEAFLRTAKL 168
Query: 121 IYKKIQDGVFDV 132
I++ +Q+G D+
Sbjct: 169 IFQSVQEGNVDL 180
>sp|P61018|RAB4B_HUMAN Ras-related protein Rab-4B OS=Homo sapiens GN=RAB4B PE=1 SV=1
Length = 213
Score = 166 bits (419), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 81/142 (57%), Positives = 101/142 (71%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
++ + K +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N LA+WL DAR
Sbjct: 49 VVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDART 108
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
A+ N+ ++L GNK DL R V+ E +FA+E+ L+F+E SA T +NVEEAF+K A T
Sbjct: 109 LASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCART 168
Query: 121 IYKKIQDGVFDVSNESYGIKVG 142
I KI G D GI+ G
Sbjct: 169 ILNKIDSGELDPERMGSGIQYG 190
>sp|P61017|RAB4B_CANFA Ras-related protein Rab-4B OS=Canis familiaris GN=RAB4B PE=2 SV=1
Length = 213
Score = 166 bits (419), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 81/142 (57%), Positives = 101/142 (71%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
++ + K +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N LA+WL DAR
Sbjct: 49 VVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDART 108
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
A+ N+ ++L GNK DL R V+ E +FA+E+ L+F+E SA T +NVEEAF+K A T
Sbjct: 109 LASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCART 168
Query: 121 IYKKIQDGVFDVSNESYGIKVG 142
I KI G D GI+ G
Sbjct: 169 ILNKIDSGELDPERMGSGIQYG 190
>sp|P51146|RAB4B_RAT Ras-related protein Rab-4B OS=Rattus norvegicus GN=Rab4b PE=2 SV=1
Length = 213
Score = 166 bits (419), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 81/142 (57%), Positives = 101/142 (71%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
++ + K +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N LA+WL DAR
Sbjct: 49 VVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDART 108
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
A+ N+ ++L GNK DL R V+ E +FA+E+ L+F+E SA T +NVEEAF+K A T
Sbjct: 109 LASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCART 168
Query: 121 IYKKIQDGVFDVSNESYGIKVG 142
I KI G D GI+ G
Sbjct: 169 ILNKIDSGELDPERMGSGIQYG 190
>sp|Q91ZR1|RAB4B_MOUSE Ras-related protein Rab-4B OS=Mus musculus GN=Rab4b PE=2 SV=2
Length = 213
Score = 166 bits (419), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 81/142 (57%), Positives = 101/142 (71%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
++ + K +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N LA+WL DAR
Sbjct: 49 VVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDART 108
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
A+ N+ ++L GNK DL R V+ E +FA+E+ L+F+E SA T +NVEEAF+K A T
Sbjct: 109 LASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCART 168
Query: 121 IYKKIQDGVFDVSNESYGIKVG 142
I KI G D GI+ G
Sbjct: 169 ILNKIDSGELDPERMGSGIQYG 190
>sp|Q6PHI9|RAB4A_DANRE Ras-related protein Rab-4A OS=Danio rerio GN=rab4a PE=2 SV=2
Length = 213
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 108/165 (65%), Gaps = 2/165 (1%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
+I++ NK +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L +WL DAR
Sbjct: 49 IISVVNKFVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARM 108
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
A+ N+ I+L GNK DL R V+ E +FA+E+ L+F+E SA T +NVEEAF++ A
Sbjct: 109 LASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARK 168
Query: 121 IYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGR--DGSSSQAGGC 163
I KI+ G D GI+ G + R S Q GC
Sbjct: 169 ILNKIESGELDPERMGSGIQYGDAALRQLRSPRRAQAESIQECGC 213
>sp|Q9LH50|RAA4D_ARATH Ras-related protein RABA4d OS=Arabidopsis thaliana GN=RABA4D PE=1
SV=1
Length = 222
Score = 164 bits (415), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 105/168 (62%), Gaps = 10/168 (5%)
Query: 2 ITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH 61
+ IDNK +K QIWDTAGQE +R++T +YYRGA GA+LVYD+T+R++F+H+A WLE+ R H
Sbjct: 57 LVIDNKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGH 116
Query: 62 ANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATI 121
A+ N+ IMLIGNKCDL RAV TE+ ++FA+ L FME SA A NVE AF+ I
Sbjct: 117 ADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEI 176
Query: 122 YKKIQDGVF-----DVSNESYGIKVGYGGIPGPSGGRDGSSSQAGGCC 164
Y+ I D S +K IP S + GGCC
Sbjct: 177 YRIISKKSLTADDDDADGNSSLLKGTRIIIPSEQ-----ESGKRGGCC 219
>sp|Q2TBH7|RAB4A_BOVIN Ras-related protein Rab-4A OS=Bos taurus GN=RAB4A PE=2 SV=3
Length = 218
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 107/165 (64%), Gaps = 2/165 (1%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
+I + K +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L +WL DAR
Sbjct: 54 IINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARM 113
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
A+ N+ I+L GNK DL R V+ E +FA+E+ L+F+E SA T +NVEEAF++ A
Sbjct: 114 LASQNIVIILCGNKKDLDTDREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARK 173
Query: 121 IYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGR--DGSSSQAGGC 163
I KI+ G D GI+ G + R S+Q GC
Sbjct: 174 ILNKIESGELDPERMGSGIQYGDAALRQLRSPRRAQAPSAQECGC 218
>sp|Q68EK7|RAB4B_DANRE Ras-related protein Rab-4B OS=Danio rerio GN=rab4b PE=2 SV=1
Length = 213
Score = 162 bits (411), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 110/165 (66%), Gaps = 1/165 (0%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
++ + K +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L +WL DAR
Sbjct: 49 VVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDART 108
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
A+ N+ I+L GNK DL R V+ E +FA+E+ L+F+E SA T +NVEEAF+K A +
Sbjct: 109 LASPNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARS 168
Query: 121 IYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGSSSQAGGCCS 165
I KI+ G D GI+ G + R GS++Q C+
Sbjct: 169 IPNKIESGELDPERMGSGIQYGDASLRQIRQPR-GSAAQTKQQCN 212
>sp|P20338|RAB4A_HUMAN Ras-related protein Rab-4A OS=Homo sapiens GN=RAB4A PE=1 SV=3
Length = 218
Score = 162 bits (410), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 105/163 (64%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
+I + K +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L +WL DAR
Sbjct: 54 IINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARM 113
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
A+ N+ I+L GNK DL R V+ E +FA+E+ L+F+E SA T +NVEEAF++ A
Sbjct: 114 LASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARK 173
Query: 121 IYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGSSSQAGGC 163
I KI+ G D GI+ G + R + A C
Sbjct: 174 ILNKIESGELDPERMGSGIQYGDAALRQLRSPRRAQAPNAQEC 216
>sp|P05714|RAB4A_RAT Ras-related protein Rab-4A OS=Rattus norvegicus GN=Rab4a PE=2 SV=3
Length = 218
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 107/165 (64%), Gaps = 2/165 (1%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
+I + K +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L +WL DAR
Sbjct: 54 IINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARM 113
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
A+ N+ I+L GNK DL R V+ E +FA+E+ L+F+E SA T +NVEEAF++ A
Sbjct: 114 LASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARK 173
Query: 121 IYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGR--DGSSSQAGGC 163
I KI+ G D GI+ G + R S+Q GC
Sbjct: 174 ILNKIESGELDPERMGSGIQYGDAALRQLRSPRRTQAPSAQECGC 218
>sp|P56371|RAB4A_MOUSE Ras-related protein Rab-4A OS=Mus musculus GN=Rab4a PE=1 SV=2
Length = 218
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 107/165 (64%), Gaps = 2/165 (1%)
Query: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
+I + K +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L +WL DAR
Sbjct: 54 IINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARM 113
Query: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 120
A+ N+ ++L GNK DL R V+ E +FA+E+ L+F+E SA T +NVEEAF++ A
Sbjct: 114 LASQNIVLILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARK 173
Query: 121 IYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGR--DGSSSQAGGC 163
I KI+ G D GI+ G + R S+Q GC
Sbjct: 174 ILNKIESGELDPERMGSGIQYGDAALRQLRSPRRTQAPSAQECGC 218
>sp|Q559X6|RAB2B_DICDI Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B
PE=3 SV=1
Length = 202
Score = 160 bits (406), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/134 (57%), Positives = 101/134 (75%)
Query: 2 ITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH 61
I I++K IKLQIWDTAGQE FRSITR+YYRGA A++VYDITRR++F L SWL D R+
Sbjct: 66 ININDKQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKF 125
Query: 62 ANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATI 121
++ ++T +LIGNK DL R VST E ++FA+++GL+F E SAKTA NV+EAF K+ I
Sbjct: 126 SSCDVTTVLIGNKADLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFEKSTEQI 185
Query: 122 YKKIQDGVFDVSNE 135
KK++ +SNE
Sbjct: 186 LKKLESNPGLLSNE 199
>sp|P17610|YPT3_SCHPO GTP-binding protein ypt3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt3 PE=1 SV=1
Length = 214
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 104/163 (63%)
Query: 2 ITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH 61
I +DNK IK QIWDTAGQE +R+IT +YYRGA GAL+VYDIT++ +F+++ WL++ R+H
Sbjct: 52 IVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREH 111
Query: 62 ANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATI 121
A++N+ IML+GNK DL H RAVSTEE + FA E+ L F+E SA A NVEEAF I
Sbjct: 112 ADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEI 171
Query: 122 YKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGSSSQAGGCC 164
++ + + + ++ G P+ + CC
Sbjct: 172 FRIVSNRSLEAGDDGVHPTAGQTLNIAPTMNDLNKKKSSSQCC 214
>sp|Q40191|RB11A_LOTJA Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1
Length = 226
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 92/121 (76%)
Query: 2 ITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH 61
+ ID+K +K QIWDTAGQE +R++T +YYRGA GA+LVYDIT+R+TF+H+ WLE+ R H
Sbjct: 59 LVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNH 118
Query: 62 ANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATI 121
A+ N+ I+LIGNKCDL ++R V TE+ ++FA++ GL F+E SA A NVE AF I
Sbjct: 119 ADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEI 178
Query: 122 Y 122
Y
Sbjct: 179 Y 179
>sp|Q9FK68|RAA1C_ARATH Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1
SV=1
Length = 216
Score = 157 bits (396), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 105/168 (62%), Gaps = 11/168 (6%)
Query: 2 ITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH 61
+ +D+K IK QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ +WL++ R H
Sbjct: 55 LNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNH 114
Query: 62 ANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATI 121
+ N+ +ML+GNK DL H AV TE+ + FA++ L FME SA A NVE AF + I
Sbjct: 115 TDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQI 174
Query: 122 YKKIQDGVFDVSNESYGIKVGYGGIPGPSG----GRDGSSSQAGGCCS 165
+ + + ++ES +P G+D S+ + GGCCS
Sbjct: 175 HHIVSKKAMEAASES-------ANVPSKGDKIDIGKDVSAVKKGGCCS 215
>sp|Q9FJH0|RAA1F_ARATH Ras-related protein RABA1f OS=Arabidopsis thaliana GN=RABA1F PE=2
SV=1
Length = 217
Score = 157 bits (396), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 103/164 (62%), Gaps = 2/164 (1%)
Query: 2 ITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH 61
I +D+K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H
Sbjct: 55 IHVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDH 114
Query: 62 ANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATI 121
+AN+ IM +GNK DL H RAVSTE+ + FA+ FME SA + NVE AF + + I
Sbjct: 115 TDANIVIMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQI 174
Query: 122 YKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGSSSQAGGCCS 165
Y+ + D+ ++ + G G D S+ + GCCS
Sbjct: 175 YRVVSRKALDIGDDPAALPKGQTINVGSKD--DVSAVKKVGCCS 216
>sp|Q40522|RB11D_TOBAC Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1
Length = 222
Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 111/169 (65%), Gaps = 9/169 (5%)
Query: 2 ITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH 61
+ I +K +K QIWDTAGQE +R++T +YYRGA GA+LVYDIT+R+TF+H+ WLE+ R H
Sbjct: 57 LAIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAH 116
Query: 62 ANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATI 121
A+ N+ IMLIGNK DL +RAV TE+ ++FA++ GL F+E SA A N+E+AF+ I
Sbjct: 117 ADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEI 176
Query: 122 YKKI-QDGVFDVSNESYGIKVGYGG----IPGPSGGRDGSSSQAGGCCS 165
+ + + + N+S G G +PGP G+ +A CCS
Sbjct: 177 FNIVNKKNLAADDNQSNGNPASLTGKKILVPGP--GQVIPEKKA--CCS 221
>sp|Q9FE79|RAA4C_ARATH Ras-related protein RABA4c OS=Arabidopsis thaliana GN=RABA4C PE=2
SV=1
Length = 223
Score = 156 bits (394), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 107/165 (64%), Gaps = 3/165 (1%)
Query: 2 ITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH 61
+ ID K IK QIWDTAGQE +R++T +YYRGA GA+LVYDIT+R++F+H+A WLE+ R H
Sbjct: 57 LEIDRKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGH 116
Query: 62 ANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATI 121
A+ N+ IMLIGNK DL RAV TE+ ++FA+ L FME SA + NVE +F+ I
Sbjct: 117 ADKNIVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEI 176
Query: 122 YKKI--QDGVFDVSNESYGIKVGYGGIPGPSGGRDGSSSQAGGCC 164
Y+ + ++ V + ES G G G + + S+ GCC
Sbjct: 177 YRIVSKKNLVANEEGESGGDSSLLQGTKIVVAGEE-TESKGKGCC 220
>sp|Q9LK99|RAA1G_ARATH Ras-related protein RABA1g OS=Arabidopsis thaliana GN=RABA1G PE=2
SV=1
Length = 217
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 100/164 (60%), Gaps = 2/164 (1%)
Query: 2 ITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH 61
I +D K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H
Sbjct: 55 IHVDEKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDH 114
Query: 62 ANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATI 121
AN+ IML+GNK DL H RAVSTE+ + FA+ FME SA A NVE AF + + I
Sbjct: 115 TEANIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQI 174
Query: 122 YKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGSSSQAGGCCS 165
Y+ D+ ++ + G G D S + GCCS
Sbjct: 175 YRVASKKALDIGDDHTTLPKGQSINVGSKD--DVSEVKKVGCCS 216
>sp|Q1PEX3|RAA1H_ARATH Ras-related protein RABA1h OS=Arabidopsis thaliana GN=RABA1H PE=2
SV=1
Length = 218
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 101/164 (61%), Gaps = 1/164 (0%)
Query: 2 ITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH 61
I +D+K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H
Sbjct: 55 IQVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDH 114
Query: 62 ANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATI 121
+AN IML+GNK DL H RA+STEE + FA+ FME SA A NVE AF + I
Sbjct: 115 TDANTVIMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQI 174
Query: 122 YKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGSSSQAGGCCS 165
Y+ + D ++ + G + D S+ + GCC+
Sbjct: 175 YRVVSKKALDAGDDP-TTALPKGQMINVGSRDDVSAVKKSGCCA 217
>sp|Q9FJN8|RAA4A_ARATH Ras-related protein RABA4a OS=Arabidopsis thaliana GN=RABA4A PE=2
SV=1
Length = 226
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 91/121 (75%)
Query: 2 ITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH 61
+ ID+K +K QIWDTAGQE +R++T +YYRGA GA+LVYDITRR+TF+H+ WLE+ R H
Sbjct: 59 LVIDHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAH 118
Query: 62 ANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATI 121
A+ N+ I+LIGNK DL +RA+ TE+ ++FA++ GL F+E SA A NVE AF I
Sbjct: 119 ADKNIVIILIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEI 178
Query: 122 Y 122
+
Sbjct: 179 F 179
>sp|Q9S810|RAA1I_ARATH Ras-related protein RABA1i OS=Arabidopsis thaliana GN=RABA1I PE=2
SV=1
Length = 218
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 102/164 (62%), Gaps = 1/164 (0%)
Query: 2 ITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH 61
I D+K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H
Sbjct: 55 IQCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDH 114
Query: 62 ANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATI 121
+AN+ IML+GNK DL H RA+STEE + FA+ FME SA A NV+ AF + I
Sbjct: 115 TDANIVIMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQI 174
Query: 122 YKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGSSSQAGGCCS 165
Y+ + + ++ + G + G D S+ + GCCS
Sbjct: 175 YRVVSKKALEAGDDP-TTALPKGQMINVGGRDDISAVKKPGCCS 217
>sp|O49513|RAA1E_ARATH Ras-related protein RABA1e OS=Arabidopsis thaliana GN=RABA1E PE=2
SV=1
Length = 217
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 101/164 (61%), Gaps = 2/164 (1%)
Query: 2 ITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH 61
+ +D K IK Q+WDTAGQE +R+IT +YYRGA GALLVYDITR TF ++ WL++ R H
Sbjct: 55 VHVDEKIIKAQLWDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDH 114
Query: 62 ANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATI 121
+AN+ IML+GNK DL H RAV TEE F++ + FME SA A NVE+AF I
Sbjct: 115 TDANVVIMLVGNKADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQI 174
Query: 122 YKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGSSSQAGGCCS 165
Y+ + D + + + G G D ++ ++ GCCS
Sbjct: 175 YRVMSRKALDGTGDPMSLPKGQTIDIGNKD--DVTAVKSSGCCS 216
>sp|Q40521|RB11B_TOBAC Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1
Length = 217
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 102/164 (62%), Gaps = 3/164 (1%)
Query: 2 ITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH 61
I +D+K +K QIWDTAGQE +R+IT +YYRGA GAL+VYDITR TF ++ WL++ R H
Sbjct: 56 IRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDH 115
Query: 62 ANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATI 121
+ N+ IML+GNK DL H RAVSTE+ + FA+ FME SA + NVE AF + I
Sbjct: 116 TDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEI 175
Query: 122 YKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGSSSQAGGCCS 165
YK + +V ++ + G G D S+ + GCCS
Sbjct: 176 YKVVCRKALEVGDDPAALP---KGQTINVGKDDVSAVKKVGCCS 216
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,220,554
Number of Sequences: 539616
Number of extensions: 2136416
Number of successful extensions: 9673
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 8145
Number of HSP's gapped (non-prelim): 1104
length of query: 165
length of database: 191,569,459
effective HSP length: 109
effective length of query: 56
effective length of database: 132,751,315
effective search space: 7434073640
effective search space used: 7434073640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)