Query 031133
Match_columns 165
No_of_seqs 171 out of 413
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 15:20:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031133.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031133hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kmm_A Guanosine-3',5'-BIS(dip 64.8 7.1 0.00024 24.7 3.6 26 12-37 3-28 (73)
2 3hvz_A Uncharacterized protein 61.8 8.8 0.0003 25.7 3.7 59 9-69 5-68 (78)
3 1wwt_A Threonyl-tRNA synthetas 55.7 17 0.00057 24.0 4.3 29 9-37 9-38 (88)
4 1r8o_A STI, kunitz trypsin inh 42.5 13 0.00045 25.9 2.1 18 54-71 6-24 (96)
5 1ryj_A Unknown; beta/alpha pro 38.4 42 0.0014 21.3 4.0 53 15-69 7-66 (70)
6 1tie_A Erythrina trypsin inhib 35.8 19 0.00065 27.5 2.2 18 54-71 6-23 (172)
7 2k9i_A Plasmid PRN1, complete 34.3 70 0.0024 18.6 4.4 37 96-133 7-44 (55)
8 1r8n_A STI, kunitz trypsin inh 33.7 21 0.00072 27.7 2.2 19 54-72 10-28 (185)
9 3s8k_A Latex serine proteinase 33.4 22 0.00075 27.5 2.3 17 55-71 11-27 (184)
10 1eyl_A RWCI-3, chymotrypsin in 32.9 22 0.00076 27.5 2.2 18 54-71 11-28 (186)
11 1avw_B STI, trypsin inhibitor; 32.9 19 0.00065 27.6 1.8 18 54-71 7-24 (177)
12 2cu3_A Unknown function protei 32.4 51 0.0018 20.4 3.6 54 15-69 2-60 (64)
13 2dre_A Water-soluble chlorophy 32.4 23 0.00079 27.3 2.2 18 54-71 11-28 (180)
14 3tc2_A Kunitz-type proteinase 32.2 23 0.0008 27.3 2.3 17 55-71 13-29 (187)
15 3bx1_D BASI, alpha-amylase/sub 31.9 22 0.00074 27.4 2.0 18 54-71 10-27 (181)
16 1f0z_A THis protein; ubiquitin 30.9 27 0.00092 21.8 2.0 23 15-37 3-25 (66)
17 2k5p_A THis protein, thiamine- 30.6 27 0.00093 23.0 2.1 23 15-37 3-27 (78)
18 2an7_A Protein PARD; bacterial 28.8 81 0.0028 21.5 4.2 34 99-133 2-36 (83)
19 2kl0_A Putative thiamin biosyn 28.2 32 0.0011 22.3 2.1 22 15-37 3-24 (73)
20 3iir_A Trypsin inhibitor; beta 27.2 20 0.0007 27.8 1.1 18 54-71 7-24 (190)
21 1p94_A Plasmid partition prote 26.9 1E+02 0.0035 20.3 4.5 55 79-134 11-70 (76)
22 2gzb_A Kunitz-type proteinase 26.7 30 0.001 26.3 2.0 18 54-71 9-27 (166)
23 2qn4_A RASI, alpha-amylase/sub 26.3 31 0.0011 27.0 2.0 19 53-71 30-48 (200)
24 1tyg_B YJBS; alpha beta barrel 25.0 39 0.0013 22.9 2.1 57 13-69 21-83 (87)
25 1wba_A Winged bean albumin 1; 24.5 31 0.0011 26.5 1.7 15 54-68 9-23 (175)
26 2ba3_A NIKA; dimer, bacterial 23.8 1.2E+02 0.004 17.7 4.4 34 96-130 13-47 (51)
27 3hei_B Ephrin-A1; EPH receptor 22.6 83 0.0028 23.1 3.7 23 49-71 94-116 (132)
28 4an6_A Trypsin inhibitor; kuni 22.5 50 0.0017 25.3 2.5 18 55-72 9-27 (185)
29 1vcb_B Protein (elongin C); tu 21.8 58 0.002 22.8 2.6 26 2-27 9-34 (112)
30 3imi_A HIT family protein; str 20.5 60 0.002 23.3 2.5 37 1-43 8-48 (147)
31 3e8l_C Serine proteinase inhib 20.1 56 0.0019 25.3 2.4 18 55-72 21-38 (185)
No 1
>2kmm_A Guanosine-3',5'-BIS(diphosphate) 3'- pyrophosphohydrolase; methods development, TGS domain, predominantly beta-sheet structure; NMR {Porphyromonas gingivalis}
Probab=64.80 E-value=7.1 Score=24.66 Aligned_cols=26 Identities=15% Similarity=0.215 Sum_probs=23.0
Q ss_pred eEEEecCCcEEEEeCCccHHHHHhhc
Q 031133 12 IKVMKTDGKILEYKAPMKVQDVLAEF 37 (165)
Q Consensus 12 iKV~~~dG~v~e~~~Pv~a~evl~~~ 37 (165)
++|..+||++.+|...+|+.+++...
T Consensus 3 i~i~~p~g~~~~~~~g~T~~dla~~i 28 (73)
T 2kmm_A 3 VMVFTPKGEIKRLPQGATALDFAYSL 28 (73)
T ss_dssp EEEECTTCCEEEECTTCBHHHHHHHH
T ss_pred EEEEcCCCCEEEcCCCCcHHHHHHHH
Confidence 67777899999999999999998775
No 2
>3hvz_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.20A {Clostridium leptum}
Probab=61.80 E-value=8.8 Score=25.67 Aligned_cols=59 Identities=15% Similarity=0.203 Sum_probs=36.1
Q ss_pred CceeEEEecCCcEEEEeCCccHHHHHhh-cC---CcEE-eCCCCCccCCCCCCccCCCCeEEEeeC
Q 031133 9 EKVIKVMKTDGKILEYKAPMKVQDVLAE-FA---GHAI-SDSFPEIRHLMPDFKLLGGNLYFLVPV 69 (165)
Q Consensus 9 ~~~iKV~~~dG~v~e~~~Pv~a~evl~~-~P---gh~v-~~s~~~~~~L~~de~L~~G~lYfLlP~ 69 (165)
...|.|..+||.+++|....|+.|+... ++ ..++ +.-.. ...+.+..|+.|-.--++..
T Consensus 5 ~~~i~v~tP~G~~~~lp~GaT~~D~A~~Ih~~lg~~~v~AkVNG--~~v~L~~~L~~gd~VeIit~ 68 (78)
T 3hvz_A 5 PEEVFVFTPKGDVISLPIGSTVIDFAYAIHSAVGNRMIGAKVDG--RIVPIDYKVKTGEIIDVLTT 68 (78)
T ss_dssp -CEEEEECTTSCEEEEETTCBHHHHHHHHCHHHHHTEEEEEETT--EEECTTCBCCTTCBEEEEEC
T ss_pred CceEEEECCCCCEEEecCCCCHHHHHHHhhhhhhcceEEEEECC--EEcCCCcccCCCCEEEEEcc
Confidence 4579999999999999999999997643 22 1222 11122 22333566666655444444
No 3
>1wwt_A Threonyl-tRNA synthetase, cytoplasmic; TGS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, ligase; NMR {Homo sapiens}
Probab=55.73 E-value=17 Score=23.96 Aligned_cols=29 Identities=24% Similarity=0.297 Sum_probs=24.9
Q ss_pred CceeEEEecCCcEEEEeC-CccHHHHHhhc
Q 031133 9 EKVIKVMKTDGKILEYKA-PMKVQDVLAEF 37 (165)
Q Consensus 9 ~~~iKV~~~dG~v~e~~~-Pv~a~evl~~~ 37 (165)
...++|..+||++.+|.. ++++.++....
T Consensus 9 ~~~i~I~lpdG~~~~~~~~~~T~~dia~~i 38 (88)
T 1wwt_A 9 SKPIKVTLPDGKQVDAESWKTTPYQIACGI 38 (88)
T ss_dssp CCEEEEECTTSCEEEEETTTCCHHHHHHHS
T ss_pred CCCEEEEECCCCEEEcccCCCCHHHHHHHh
Confidence 456788888999999997 99999998775
No 4
>1r8o_A STI, kunitz trypsin inhibitor; kunitz (STI) trypsin inhibitor, beta-trefoil fold, hydrolase inhibitor; 1.83A {Copaifera langsdorffii} SCOP: b.42.4.1
Probab=42.46 E-value=13 Score=25.87 Aligned_cols=18 Identities=17% Similarity=0.353 Sum_probs=15.5
Q ss_pred CCCcc-CCCCeEEEeeCCC
Q 031133 54 PDFKL-LGGNLYFLVPVPL 71 (165)
Q Consensus 54 ~de~L-~~G~lYfLlP~~~ 71 (165)
.+.+| ++|.-||++|...
T Consensus 6 ~G~~l~~~G~~YyI~p~~~ 24 (96)
T 1r8o_A 6 DGKPIENDGAEYYILPSVR 24 (96)
T ss_dssp TSCCCBSSSSCEEEEESSS
T ss_pred CCCEeeeCCCcEEEeeCcc
Confidence 46789 9999999999864
No 5
>1ryj_A Unknown; beta/alpha protein, structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.15.3.2
Probab=38.45 E-value=42 Score=21.25 Aligned_cols=53 Identities=19% Similarity=0.305 Sum_probs=34.0
Q ss_pred EecCCcE----EEEeCCccHHHHHhhcC---CcEEeCCCCCccCCCCCCccCCCCeEEEeeC
Q 031133 15 MKTDGKI----LEYKAPMKVQDVLAEFA---GHAISDSFPEIRHLMPDFKLLGGNLYFLVPV 69 (165)
Q Consensus 15 ~~~dG~v----~e~~~Pv~a~evl~~~P---gh~v~~s~~~~~~L~~de~L~~G~lYfLlP~ 69 (165)
|..||+. .++....|+++++...- ..+++--. -..++.++.|..|----++|.
T Consensus 7 i~vNg~~~~~~~~~~~~~tv~~Ll~~l~~~~~~v~vavN--~~~v~~~~~L~~gD~V~ii~~ 66 (70)
T 1ryj_A 7 FTVITDDGKKILESGAPRRIKDVLGELEIPIETVVVKKN--GQIVIDEEEIFDGDIIEVIRV 66 (70)
T ss_dssp EEEEETTEEEEEEESSCCBHHHHHHHTTCCTTTEEEEET--TEECCTTSBCCTTCEEEEEEC
T ss_pred EEEeCccCceeEECCCCCcHHHHHHHhCCCCCCEEEEEC--CEECCCcccCCCCCEEEEEec
Confidence 5668887 89988899999998752 21111000 134556778888866666654
No 6
>1tie_A Erythrina trypsin inhibitor; proteinase inhibitor (trypsin); 2.50A {Erythrina caffra} SCOP: b.42.4.1
Probab=35.75 E-value=19 Score=27.51 Aligned_cols=18 Identities=22% Similarity=0.412 Sum_probs=15.5
Q ss_pred CCCccCCCCeEEEeeCCC
Q 031133 54 PDFKLLGGNLYFLVPVPL 71 (165)
Q Consensus 54 ~de~L~~G~lYfLlP~~~ 71 (165)
.+++|++|.-||++|...
T Consensus 6 ~G~~l~~G~~YyI~p~~~ 23 (172)
T 1tie_A 6 NGEVVQNGGTYYLLPQVW 23 (172)
T ss_dssp TSCBCCTTCEEEEEESSG
T ss_pred CCCCCcCCCCEEEeECcc
Confidence 468899999999999854
No 7
>2k9i_A Plasmid PRN1, complete sequence; plasmid COPY control protein, ribbon helix helix protein, DNA binding protein; NMR {Sulfolobus islandicus} PDB: 3ft7_A
Probab=34.29 E-value=70 Score=18.61 Aligned_cols=37 Identities=16% Similarity=0.202 Sum_probs=27.6
Q ss_pred CceEEEEEEEcHHHHHHHHHHhc-CCcccHHHHHHHHhh
Q 031133 96 SSVVRIKVVISKQELQDLQMLQK-GGVVSVQDVASWLQG 133 (165)
Q Consensus 96 ~~~~rvKi~itk~~l~~l~~~~~-~~~~s~e~~l~~l~~ 133 (165)
...+++-|+|+.+.+++|-.+.+ .| .|..+++.....
T Consensus 7 ~~~~~i~vrl~~el~~~l~~~a~~~g-~s~s~~ir~ai~ 44 (55)
T 2k9i_A 7 LNGIKLGVYIPQEWHDRLMEIAKEKN-LTLSDVCRLAIK 44 (55)
T ss_dssp TCCEEEEEEECHHHHHHHHHHHHHHT-CCHHHHHHHHHH
T ss_pred CccceEEEEcCHHHHHHHHHHHHHhC-CCHHHHHHHHHH
Confidence 35689999999999999777763 34 577777666544
No 8
>1r8n_A STI, kunitz trypsin inhibitor; kunitz-type trypsin/kallikrein inhibitor, beta-trefoil fold, flamboyant, hydrolase inhibitor; 1.75A {Delonix regia} SCOP: b.42.4.1
Probab=33.72 E-value=21 Score=27.66 Aligned_cols=19 Identities=16% Similarity=0.464 Sum_probs=16.1
Q ss_pred CCCccCCCCeEEEeeCCCC
Q 031133 54 PDFKLLGGNLYFLVPVPLP 72 (165)
Q Consensus 54 ~de~L~~G~lYfLlP~~~~ 72 (165)
.+.+|++|.-||++|....
T Consensus 10 ~G~~l~~G~~YyI~p~~~g 28 (185)
T 1r8n_A 10 EGYPVFLGSEYYIVSAIIG 28 (185)
T ss_dssp TSCBCBTTSEEEEEECTTS
T ss_pred CCCCCcCCCCEEEEECccC
Confidence 4788999999999998653
No 9
>3s8k_A Latex serine proteinase inhibitor; kunitz-STI fold, protease inhibitor, hydrolase inhibitor; HET: NAG FUC; 1.70A {Carica papaya} PDB: 3s8j_A*
Probab=33.35 E-value=22 Score=27.52 Aligned_cols=17 Identities=29% Similarity=0.307 Sum_probs=15.3
Q ss_pred CCccCCCCeEEEeeCCC
Q 031133 55 DFKLLGGNLYFLVPVPL 71 (165)
Q Consensus 55 de~L~~G~lYfLlP~~~ 71 (165)
+.+|++|.-||++|...
T Consensus 11 G~~l~~g~~YyI~p~~~ 27 (184)
T 3s8k_A 11 GKPVLYGVDYFVVSAIW 27 (184)
T ss_dssp SCBCBTTSCEEEEESSC
T ss_pred CCCCcCCCcEEEEEccc
Confidence 67899999999999875
No 10
>1eyl_A RWCI-3, chymotrypsin inhibitor; beta trefoil, hydrolase inhibitor; HET: SO4; 1.90A {Psophocarpus tetragonolobus} SCOP: b.42.4.1 PDB: 1fn0_A* 2beb_A 2esu_A 1fmz_A* 2bea_A 2et2_A 4wbc_A* 1wbc_A 2wbc_A* 1xg6_A 2qyi_B 3i29_B 3i2x_A 3i2a_A 3qyd_A
Probab=32.90 E-value=22 Score=27.54 Aligned_cols=18 Identities=22% Similarity=0.381 Sum_probs=15.6
Q ss_pred CCCccCCCCeEEEeeCCC
Q 031133 54 PDFKLLGGNLYFLVPVPL 71 (165)
Q Consensus 54 ~de~L~~G~lYfLlP~~~ 71 (165)
.+.+|++|.-||++|...
T Consensus 11 ~G~~l~~G~~YYI~p~~~ 28 (186)
T 1eyl_A 11 EGNLVENGGTYYLLPHIW 28 (186)
T ss_dssp TSSBCBTTCEEEEEESSG
T ss_pred CCCCCcCCCCEEEeeccc
Confidence 478899999999999854
No 11
>1avw_B STI, trypsin inhibitor; complex (proteinase/inhibitor), porcine trypsin, soybean trypsin inhibitor, kunitz-type, beta-trefoil fold; 1.75A {Glycine max} SCOP: b.42.4.1 PDB: 1avx_B 1avu_A 1ba7_A
Probab=32.88 E-value=19 Score=27.63 Aligned_cols=18 Identities=17% Similarity=0.266 Sum_probs=15.6
Q ss_pred CCCccCCCCeEEEeeCCC
Q 031133 54 PDFKLLGGNLYFLVPVPL 71 (165)
Q Consensus 54 ~de~L~~G~lYfLlP~~~ 71 (165)
.+.+|++|.-||++|...
T Consensus 7 ~G~~l~~G~~YyI~p~~~ 24 (177)
T 1avw_B 7 EGNPLENGGTYYILSDIT 24 (177)
T ss_dssp TSCBCBTTEEEEEEESST
T ss_pred CCCCCcCCCcEEEEeCcc
Confidence 478899999999999854
No 12
>2cu3_A Unknown function protein; thermus thermophilus HB8, structural genomics, riken structu genomics/proteomics initiative, RSGI, NPPSFA; 1.70A {Thermus thermophilus} SCOP: d.15.3.2 PDB: 2htm_E
Probab=32.41 E-value=51 Score=20.35 Aligned_cols=54 Identities=17% Similarity=0.157 Sum_probs=31.4
Q ss_pred EecCCcEEEEeCCccHHHHHhhcC---CcEE-eCCCCCc-cCCCCCCccCCCCeEEEeeC
Q 031133 15 MKTDGKILEYKAPMKVQDVLAEFA---GHAI-SDSFPEI-RHLMPDFKLLGGNLYFLVPV 69 (165)
Q Consensus 15 ~~~dG~v~e~~~Pv~a~evl~~~P---gh~v-~~s~~~~-~~L~~de~L~~G~lYfLlP~ 69 (165)
|..||+..++ ...|+++++...- .++. .--...+ ..-..+..|..|----++|.
T Consensus 2 i~vNg~~~~~-~~~tv~~ll~~l~~~~~~v~vavN~~~v~~~~~~~~~L~dgD~v~i~~~ 60 (64)
T 2cu3_A 2 VWLNGEPRPL-EGKTLKEVLEEMGVELKGVAVLLNEEAFLGLEVPDRPLRDGDVVEVVAL 60 (64)
T ss_dssp EEETTEEECC-TTCCHHHHHHHHTBCGGGEEEEETTEEEEGGGCCCCCCCTTCEEEEEEC
T ss_pred EEECCEEEEc-CCCcHHHHHHHcCCCCCcEEEEECCEECCccccCCcCCCCCCEEEEEee
Confidence 5679999999 8899999997742 1221 1111111 11224466777755555553
No 13
>2dre_A Water-soluble chlorophyll protein; beta-trefoil, tetramer, plant, singlet oxygen, photooxidation, chlorophyll carrier; HET: CLA; 2.00A {Lepidium virginicum}
Probab=32.40 E-value=23 Score=27.29 Aligned_cols=18 Identities=22% Similarity=0.198 Sum_probs=15.7
Q ss_pred CCCccCCCCeEEEeeCCC
Q 031133 54 PDFKLLGGNLYFLVPVPL 71 (165)
Q Consensus 54 ~de~L~~G~lYfLlP~~~ 71 (165)
.+.+|++|.-||++|...
T Consensus 11 ~G~~l~~G~~YyI~p~~~ 28 (180)
T 2dre_A 11 NGNPLKIETRYFIQPASD 28 (180)
T ss_dssp TSCBCBTTCCEEEEESSC
T ss_pred CCCCCcCCCCEEEEeCcc
Confidence 478899999999999865
No 14
>3tc2_A Kunitz-type proteinase inhibitor P1H5; beta-trefoil fold, protease inhibitor, hydrolase inhibitor; 1.60A {Solanum tuberosum}
Probab=32.24 E-value=23 Score=27.33 Aligned_cols=17 Identities=12% Similarity=-0.062 Sum_probs=15.4
Q ss_pred CCccCCCCeEEEeeCCC
Q 031133 55 DFKLLGGNLYFLVPVPL 71 (165)
Q Consensus 55 de~L~~G~lYfLlP~~~ 71 (165)
+.+|++|.-||++|..+
T Consensus 13 G~~l~~g~~YyI~p~~~ 29 (187)
T 3tc2_A 13 GKELDPRLSYRIISTFW 29 (187)
T ss_dssp SCBCCTTSCEEEECSCC
T ss_pred CCCCcCCCCEEEEEccc
Confidence 78899999999999975
No 15
>3bx1_D BASI, alpha-amylase/subtilisin inhibitor; complex (proteinase/inhibitor) enzyme inhibition, savinase, barley alpha-amylase/subtilisin inhibitor; 1.85A {Hordeum vulgare} SCOP: b.42.4.1 PDB: 1ava_C 2iwt_B*
Probab=31.89 E-value=22 Score=27.40 Aligned_cols=18 Identities=11% Similarity=0.252 Sum_probs=15.5
Q ss_pred CCCccCCCCeEEEeeCCC
Q 031133 54 PDFKLLGGNLYFLVPVPL 71 (165)
Q Consensus 54 ~de~L~~G~lYfLlP~~~ 71 (165)
.+++|++|.-||++|...
T Consensus 10 ~G~~l~~G~~YyI~p~~~ 27 (181)
T 3bx1_D 10 DGHELRADANYYVLSANR 27 (181)
T ss_dssp TSCBCBTTSCEEEEESSG
T ss_pred CCCCCcCCCCEEEEeccc
Confidence 478899999999999854
No 16
>1f0z_A THis protein; ubiquitin fold, transport protein; NMR {Escherichia coli} SCOP: d.15.3.2 PDB: 1zud_2
Probab=30.95 E-value=27 Score=21.83 Aligned_cols=23 Identities=13% Similarity=0.313 Sum_probs=20.4
Q ss_pred EecCCcEEEEeCCccHHHHHhhc
Q 031133 15 MKTDGKILEYKAPMKVQDVLAEF 37 (165)
Q Consensus 15 ~~~dG~v~e~~~Pv~a~evl~~~ 37 (165)
+..||+..++....|+++++...
T Consensus 3 i~vNg~~~~~~~~~tv~~ll~~l 25 (66)
T 1f0z_A 3 ILFNDQAMQCAAGQTVHELLEQL 25 (66)
T ss_dssp EEESSCEECCCTTCCHHHHHHHH
T ss_pred EEECCEEEEcCCCCcHHHHHHHc
Confidence 56799999999999999999774
No 17
>2k5p_A THis protein, thiamine-biosynthesis protein; NESG, GMR137, structural genomics, PSI-2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 3cwi_A
Probab=30.57 E-value=27 Score=23.04 Aligned_cols=23 Identities=17% Similarity=0.414 Sum_probs=19.9
Q ss_pred EecCCcEEEEe--CCccHHHHHhhc
Q 031133 15 MKTDGKILEYK--APMKVQDVLAEF 37 (165)
Q Consensus 15 ~~~dG~v~e~~--~Pv~a~evl~~~ 37 (165)
|..||+..++. .+.|+++++.+.
T Consensus 3 I~vNGe~~e~~~~~~~Tl~~LL~~l 27 (78)
T 2k5p_A 3 LTVNGKPSTVDGAESLNVTELLSAL 27 (78)
T ss_dssp EEETTEEEECSSCSCEEHHHHHHHH
T ss_pred EEECCEEEEcCCCCCCcHHHHHHHc
Confidence 56799999998 779999999774
No 18
>2an7_A Protein PARD; bacterial antidote, ribbon-helix-helix, DNA-binding motif, plasmid addiction, DNA binding protein; NMR {Escherichia coli}
Probab=28.82 E-value=81 Score=21.52 Aligned_cols=34 Identities=21% Similarity=0.201 Sum_probs=26.6
Q ss_pred EEEEEEEcHHHHHHHHHHh-cCCcccHHHHHHHHhh
Q 031133 99 VRIKVVISKQELQDLQMLQ-KGGVVSVQDVASWLQG 133 (165)
Q Consensus 99 ~rvKi~itk~~l~~l~~~~-~~~~~s~e~~l~~l~~ 133 (165)
.|+.|+||.++=++|=.+. +.| +|+.+++.++..
T Consensus 2 SrLTIrLpd~qH~rLKalAa~qG-~SInqli~E~lf 36 (83)
T 2an7_A 2 SRLTIDMTDQQHQSLKALAALQG-KTIKQYALERLF 36 (83)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHT-SCHHHHHHHHTS
T ss_pred ceeeEeCCHHHHHHHHHHHHHcC-CcHHHHHHHHcc
Confidence 4889999999988876765 456 788888877744
No 19
>2kl0_A Putative thiamin biosynthesis THis; structural genomics, PSI-2, protein structure initiative, N structural genomics consortium, NESG; NMR {Rhodopseudomonas palustris} PDB: 2lek_A
Probab=28.17 E-value=32 Score=22.32 Aligned_cols=22 Identities=18% Similarity=0.347 Sum_probs=19.2
Q ss_pred EecCCcEEEEeCCccHHHHHhhc
Q 031133 15 MKTDGKILEYKAPMKVQDVLAEF 37 (165)
Q Consensus 15 ~~~dG~v~e~~~Pv~a~evl~~~ 37 (165)
|..||+.+++ ...|+++++.+.
T Consensus 3 I~vNG~~~e~-~~~Tl~~LL~~l 24 (73)
T 2kl0_A 3 VTINGEQREV-QSASVAALMTEL 24 (73)
T ss_dssp EEETTEEECC-CCSBHHHHHHHT
T ss_pred EEECCEEEEc-CCCcHHHHHHHc
Confidence 5679999999 889999999874
No 20
>3iir_A Trypsin inhibitor; beta-trefoil fold, hydrolase inhib; 2.90A {Murraya koenigii} SCOP: b.42.4.0
Probab=27.25 E-value=20 Score=27.80 Aligned_cols=18 Identities=22% Similarity=0.145 Sum_probs=15.3
Q ss_pred CCCccCCCCeEEEeeCCC
Q 031133 54 PDFKLLGGNLYFLVPVPL 71 (165)
Q Consensus 54 ~de~L~~G~lYfLlP~~~ 71 (165)
.+.+|++|.-||++|...
T Consensus 7 ~G~~l~~g~~YyI~p~~~ 24 (190)
T 3iir_A 7 NGNVVEASRDYYLVSVIG 24 (190)
T ss_dssp TSCBCBTTSCBEEEEEEE
T ss_pred CCCCCcCCCCEEEEECcc
Confidence 367899999999999854
No 21
>1p94_A Plasmid partition protein PArg; ribbon-helix-helix, dimer, DNA binding, cell cycle; NMR {Salmonella enterica} SCOP: a.43.1.3
Probab=26.91 E-value=1e+02 Score=20.30 Aligned_cols=55 Identities=20% Similarity=0.357 Sum_probs=36.7
Q ss_pred ceeecchhhh-h---cCcCCCCceEEEEEEEcHHHHHHHHHHh-cCCcccHHHHHHHHhhc
Q 031133 79 KKVRFSEEEA-R---DGAKETSSVVRIKVVISKQELQDLQMLQ-KGGVVSVQDVASWLQGK 134 (165)
Q Consensus 79 ~~vr~~~~~~-e---~~~~~~~~~~rvKi~itk~~l~~l~~~~-~~~~~s~e~~l~~l~~~ 134 (165)
+++.||.... + ..........|+.|.|+.+.=.+|=.+. ..| .|+-+++.++...
T Consensus 11 ~~~~~g~~~~~~~wv~~~~~~~~~~Rlti~i~~~lh~rlK~~Aa~~g-~Smsdvvreli~~ 70 (76)
T 1p94_A 11 KKMTFGENRDLERVVTAPVSSGKIKRVNVNFDEEKHTRFKAACARKG-TSITDVVNQLVDN 70 (76)
T ss_dssp SCTTSSTTTTTCGGGSCCSSTTCEEECCEEEEHHHHHHHHHHHHHHT-CCHHHHHHHHHHH
T ss_pred cccccCCCCCHHHHHhCcCCccCceeEEEEcCHHHHHHHHHHHHHcC-CCHHHHHHHHHHH
Confidence 4556666421 1 1233455789999999998877755555 445 7999998887663
No 22
>2gzb_A Kunitz-type proteinase inhibitor BBCI; cruzipain, cysteine proteinase inhibitor, hydrolase; 1.70A {Bauhinia bauhinioides} PDB: 2go2_A
Probab=26.68 E-value=30 Score=26.31 Aligned_cols=18 Identities=28% Similarity=0.490 Sum_probs=15.6
Q ss_pred CCCccCC-CCeEEEeeCCC
Q 031133 54 PDFKLLG-GNLYFLVPVPL 71 (165)
Q Consensus 54 ~de~L~~-G~lYfLlP~~~ 71 (165)
.+++|++ |.-||++|...
T Consensus 9 ~G~~l~~~g~~YyI~p~~~ 27 (166)
T 2gzb_A 9 KGEPVSNAADAYYLVPVSH 27 (166)
T ss_dssp TSCBCBBSCSCEEEEESSS
T ss_pred CCCEeecCCCCEEEEeCcc
Confidence 4788999 99999999864
No 23
>2qn4_A RASI, alpha-amylase/subtilisin inhibitor; amylase inhibitor, alpha- amylase inhibitor, protease inhibitor, serine protease inhibitor; 1.80A {Oryza sativa subsp}
Probab=26.34 E-value=31 Score=27.02 Aligned_cols=19 Identities=16% Similarity=0.408 Sum_probs=16.1
Q ss_pred CCCCccCCCCeEEEeeCCC
Q 031133 53 MPDFKLLGGNLYFLVPVPL 71 (165)
Q Consensus 53 ~~de~L~~G~lYfLlP~~~ 71 (165)
-.+++|++|.-||++|..+
T Consensus 30 ~~G~~l~~G~~YyI~p~~~ 48 (200)
T 2qn4_A 30 TEGHELSADGSYYVLPASP 48 (200)
T ss_dssp TTSCBCBTTSCEEEEESST
T ss_pred CCCCCCcCCCcEEEEeCcc
Confidence 3578999999999999854
No 24
>1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2
Probab=24.96 E-value=39 Score=22.87 Aligned_cols=57 Identities=18% Similarity=0.295 Sum_probs=33.2
Q ss_pred EEEecCCcEEEEeCC-ccHHHHHhhcC---Cc-EEeCCCCCc-cCCCCCCccCCCCeEEEeeC
Q 031133 13 KVMKTDGKILEYKAP-MKVQDVLAEFA---GH-AISDSFPEI-RHLMPDFKLLGGNLYFLVPV 69 (165)
Q Consensus 13 KV~~~dG~v~e~~~P-v~a~evl~~~P---gh-~v~~s~~~~-~~L~~de~L~~G~lYfLlP~ 69 (165)
.-|..||+.+++... .|+.+++...- .. +|.--...+ +.-.++..|..|----++|.
T Consensus 21 M~I~vNGe~~el~~~~~Tv~dLL~~L~~~~~~vaVavNg~iV~~~~~~~~~L~dGD~Vei~~~ 83 (87)
T 1tyg_B 21 HMLQLNGKDVKWKKDTGTIQDLLASYQLENKIVIVERNKEIIGKERYHEVELCDRDVIEIVHF 83 (87)
T ss_dssp -CEEETTEEECCSSSCCBHHHHHHHTTCTTSCCEEEETTEEECGGGTTTSBCCSSSEEEEEEE
T ss_pred eEEEECCEEEECCCCCCcHHHHHHHhCCCCCCEEEEECCEECChhhcCCcCCCCCCEEEEEcc
Confidence 346789999999987 99999998752 11 111111111 12233566777755555553
No 25
>1wba_A Winged bean albumin 1; SEED storage protein; 1.80A {Psophocarpus tetragonolobus} SCOP: b.42.4.1
Probab=24.50 E-value=31 Score=26.46 Aligned_cols=15 Identities=27% Similarity=0.344 Sum_probs=13.7
Q ss_pred CCCccCCCCeEEEee
Q 031133 54 PDFKLLGGNLYFLVP 68 (165)
Q Consensus 54 ~de~L~~G~lYfLlP 68 (165)
.+.+|++|.-||++|
T Consensus 9 ~G~~l~~g~~YyI~p 23 (175)
T 1wba_A 9 EGNKLVNRGKYTIVS 23 (175)
T ss_dssp TSCBCBTTEEEEEEE
T ss_pred CCCCCcCCCcEEEee
Confidence 478899999999999
No 26
>2ba3_A NIKA; dimer, bacterial conjugation, relaxase, DNA binding, ribbon- helix-helix, DNA binding protein; NMR {Plasmid R64}
Probab=23.81 E-value=1.2e+02 Score=17.74 Aligned_cols=34 Identities=15% Similarity=0.113 Sum_probs=24.2
Q ss_pred CceEEEEEEEcHHHHHHHHHHhc-CCcccHHHHHHH
Q 031133 96 SSVVRIKVVISKQELQDLQMLQK-GGVVSVQDVASW 130 (165)
Q Consensus 96 ~~~~rvKi~itk~~l~~l~~~~~-~~~~s~e~~l~~ 130 (165)
.....|.|++|.+|.+.|-...+ .| .++.+.+-.
T Consensus 13 ~r~~~i~vRlt~eE~~~l~~~A~~~g-~s~SeyiR~ 47 (51)
T 2ba3_A 13 QKTVVRTLRFSPVEDETIRKKAEDSG-LTVSAYIRN 47 (51)
T ss_dssp CCSEEEEEEECHHHHHHHHHHHHHHT-CCHHHHHHH
T ss_pred cCceeEEEEECHHHHHHHHHHHHHhC-CCHHHHHHH
Confidence 45678999999999999655543 34 577666543
No 27
>3hei_B Ephrin-A1; EPH receptor tyrosine kinase, cell membrane, disulfi glycoprotein, GPI-anchor, lipoprotein, membrane, ATP-bindin kinase; 2.00A {Homo sapiens} SCOP: b.6.1.0
Probab=22.63 E-value=83 Score=23.15 Aligned_cols=23 Identities=13% Similarity=0.388 Sum_probs=20.5
Q ss_pred ccCCCCCCccCCCCeEEEeeCCC
Q 031133 49 IRHLMPDFKLLGGNLYFLVPVPL 71 (165)
Q Consensus 49 ~~~L~~de~L~~G~lYfLlP~~~ 71 (165)
+.|.+-+-|.+||+-||.+-.+.
T Consensus 94 FSP~p~G~EF~pG~~YY~ISt~~ 116 (132)
T 3hei_B 94 FTPFTLGKEFKEGHSYYYISKPI 116 (132)
T ss_dssp CCSCTTSCCCCTTCEEEEEEEES
T ss_pred cCCCCCCeeecCCCcEEEEEccC
Confidence 58999999999999999997754
No 28
>4an6_A Trypsin inhibitor; kunitz type inhibitor, factor XA inhibitor, hydrolase inhibi; 1.94A {Tamarindus indica} PDB: 4an7_B
Probab=22.54 E-value=50 Score=25.30 Aligned_cols=18 Identities=17% Similarity=0.340 Sum_probs=14.1
Q ss_pred CCc-cCCCCeEEEeeCCCC
Q 031133 55 DFK-LLGGNLYFLVPVPLP 72 (165)
Q Consensus 55 de~-L~~G~lYfLlP~~~~ 72 (165)
+.+ |++|.-||++|..+.
T Consensus 9 G~pvl~~g~~YYIlP~~~g 27 (185)
T 4an6_A 9 GKPVLNNAGQYYILPAKQG 27 (185)
T ss_dssp SCBCBSSSSEEEEEESSCC
T ss_pred CCEeecCCCCEEEEECccC
Confidence 344 789999999998753
No 29
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=21.84 E-value=58 Score=22.83 Aligned_cols=26 Identities=23% Similarity=0.409 Sum_probs=15.7
Q ss_pred CCcccCCCceeEEEecCCcEEEEeCC
Q 031133 2 GNCLMLEEKVIKVMKTDGKILEYKAP 27 (165)
Q Consensus 2 GNC~~~~~~~iKV~~~dG~v~e~~~P 27 (165)
|.|-+.....++++..||.+++...-
T Consensus 9 ~~~~~~~~~~v~L~SsDG~~F~V~~~ 34 (112)
T 1vcb_B 9 GGCEGPDAMYVKLISSDGHEFIVKRE 34 (112)
T ss_dssp --------CEEEEECTTSCEEEEEHH
T ss_pred CCccCCCCCEEEEEcCCCCEEEECHH
Confidence 45655667889999999999998543
No 30
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1
Probab=20.55 E-value=60 Score=23.34 Aligned_cols=37 Identities=16% Similarity=0.299 Sum_probs=20.9
Q ss_pred CCCccc----CCCceeEEEecCCcEEEEeCCccHHHHHhhcCCcEEe
Q 031133 1 MGNCLM----LEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAIS 43 (165)
Q Consensus 1 MGNC~~----~~~~~iKV~~~dG~v~e~~~Pv~a~evl~~~Pgh~v~ 43 (165)
|++|+. ......+|+.-|....-|...- -.+|||++.
T Consensus 8 m~~CifC~i~~~e~~~~iV~e~~~~~a~~d~~------p~~pgh~lV 48 (147)
T 3imi_A 8 ADNCIFCKIIDGQILCSKVYEDEHVLAFLDIS------QVTKGHTLV 48 (147)
T ss_dssp GGGCHHHHHHTTSSCCCEEEECSSEEEEECTT------CSSTTCEEE
T ss_pred cCCCcCcccccCCCcCCEEEECCCEEEEEcCC------CCCCcEEEE
Confidence 677874 2233356777777777664221 136777663
No 31
>3e8l_C Serine proteinase inhibitor A; beta-trefoil fold, protease inhibitor, complex, DIG hydrolase, metal-binding, protease, secreted; 2.48A {Sagittaria sagittifolia}
Probab=20.12 E-value=56 Score=25.29 Aligned_cols=18 Identities=11% Similarity=-0.175 Sum_probs=15.3
Q ss_pred CCccCCCCeEEEeeCCCC
Q 031133 55 DFKLLGGNLYFLVPVPLP 72 (165)
Q Consensus 55 de~L~~G~lYfLlP~~~~ 72 (165)
.++|+.|.-||++|..+.
T Consensus 21 ~~~~~nG~~YYIlPai~g 38 (185)
T 3e8l_C 21 LNLGGNYPLYTIQSAAIG 38 (185)
T ss_dssp CCCSSSCCCEEEEECCTT
T ss_pred ccccCCCCcEEEEEeecC
Confidence 567899999999999763
Done!