Query 031133
Match_columns 165
No_of_seqs 171 out of 413
Neff 5.8
Searched_HMMs 13730
Date Mon Mar 25 15:20:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031133.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031133hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1tkea1 d.15.10.1 (A:1-62) Thr 74.8 1.2 8.6E-05 27.0 3.0 26 12-37 2-27 (62)
2 d1nyra2 d.15.10.1 (A:4-62) Thr 67.9 0.47 3.4E-05 28.7 -0.1 26 12-37 1-26 (59)
3 d1zud21 d.15.3.2 (2:2-66) Thia 47.3 4.5 0.00033 24.4 1.9 23 15-37 2-24 (65)
4 d1tygb_ d.15.3.2 (B:) Thiamin 43.7 5.3 0.00039 24.0 1.8 24 14-37 1-25 (65)
5 d1eyla_ b.42.4.1 (A:) chymotry 40.6 6.6 0.00048 28.4 2.2 18 54-71 10-27 (179)
6 d1tiea_ b.42.4.1 (A:) Erythrin 40.2 6.9 0.0005 28.1 2.2 18 54-71 6-23 (170)
7 d1wbaa_ b.42.4.1 (A:) Winged b 38.9 6.9 0.0005 28.0 2.1 19 54-72 8-26 (171)
8 d1r8na_ b.42.4.1 (A:) Serine p 38.4 7.4 0.00054 28.3 2.2 19 54-72 10-28 (185)
9 d3bx1c1 b.42.4.1 (C:1-181) Amy 35.6 8.8 0.00064 27.8 2.2 18 54-71 10-27 (181)
10 d1avwb_ b.42.4.1 (B:) Soybean 35.4 7.7 0.00056 28.0 1.8 19 54-72 7-25 (177)
11 g1r8o.1 b.42.4.1 (A:,B:) Two-c 32.5 11 0.00079 26.9 2.2 19 54-72 6-25 (167)
12 d3e5ua1 a.4.5.4 (A:148-227) Ch 28.8 6.6 0.00048 24.0 0.4 37 96-135 22-58 (80)
13 d1shxa1 b.6.1.5 (A:32-170) Eph 28.6 32 0.0023 23.8 4.2 22 49-70 94-115 (138)
14 d1i5za1 a.4.5.4 (A:138-206) Ca 28.3 11 0.00083 22.3 1.5 33 100-135 25-57 (69)
15 d2uyzb1 d.15.1.1 (B:20-96) SUM 25.5 30 0.0022 20.7 3.3 28 11-38 4-33 (77)
16 d1wgra_ d.15.1.5 (A:) Growth f 24.8 44 0.0032 21.1 4.2 30 7-36 7-38 (100)
17 d2cu3a1 d.15.3.2 (A:1-63) Unch 22.8 17 0.0012 21.5 1.5 23 14-37 1-23 (63)
No 1
>d1tkea1 d.15.10.1 (A:1-62) Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain {Escherichia coli [TaxId: 562]}
Probab=74.84 E-value=1.2 Score=27.00 Aligned_cols=26 Identities=19% Similarity=0.258 Sum_probs=22.6
Q ss_pred eEEEecCCcEEEEeCCccHHHHHhhc
Q 031133 12 IKVMKTDGKILEYKAPMKVQDVLAEF 37 (165)
Q Consensus 12 iKV~~~dG~v~e~~~Pv~a~evl~~~ 37 (165)
++|-.+||.+++|...+|+.|+....
T Consensus 2 ~~ItlPDG~~~~~~~g~T~~diA~~I 27 (62)
T d1tkea1 2 PVITLPDGSQRHYDHAVSPMDVALDI 27 (62)
T ss_dssp CEEECTTSCEEECSSCBCHHHHHHHH
T ss_pred CEEECCCCCEEEcCCCCCHHHHHHHH
Confidence 46777999999999999999998763
No 2
>d1nyra2 d.15.10.1 (A:4-62) Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain {Staphylococcus aureus [TaxId: 1280]}
Probab=67.92 E-value=0.47 Score=28.74 Aligned_cols=26 Identities=15% Similarity=0.309 Sum_probs=22.6
Q ss_pred eEEEecCCcEEEEeCCccHHHHHhhc
Q 031133 12 IKVMKTDGKILEYKAPMKVQDVLAEF 37 (165)
Q Consensus 12 iKV~~~dG~v~e~~~Pv~a~evl~~~ 37 (165)
|+|..+||.+.+|..++|+.|+-...
T Consensus 1 I~ItlPDG~~~~~~~g~T~~diA~~I 26 (59)
T d1nyra2 1 INIQFPDGNKKAFDKGTTTEDIAQSI 26 (59)
T ss_dssp CBBCCTTSCCCBCCTTCCHHHHHHTT
T ss_pred CEEECCCCCEEEcCCCCCHHHHHHHH
Confidence 46778999999999999999987764
No 3
>d1zud21 d.15.3.2 (2:2-66) Thiamin biosynthesis sulfur carrier protein ThiS {Escherichia coli [TaxId: 562]}
Probab=47.30 E-value=4.5 Score=24.43 Aligned_cols=23 Identities=13% Similarity=0.313 Sum_probs=20.3
Q ss_pred EecCCcEEEEeCCccHHHHHhhc
Q 031133 15 MKTDGKILEYKAPMKVQDVLAEF 37 (165)
Q Consensus 15 ~~~dG~v~e~~~Pv~a~evl~~~ 37 (165)
|..||+..++..+.++++++..+
T Consensus 2 I~vNg~~~~~~~~~tl~~ll~~l 24 (65)
T d1zud21 2 ILFNDQAMQCAAGQTVHELLEQL 24 (65)
T ss_dssp EEETTEEECCCTTCBHHHHHHHH
T ss_pred EEECCEEEEcCCCCcHHHHHHHc
Confidence 46799999999999999999763
No 4
>d1tygb_ d.15.3.2 (B:) Thiamin biosynthesis sulfur carrier protein ThiS {Bacillus subtilis [TaxId: 1423]}
Probab=43.69 E-value=5.3 Score=24.05 Aligned_cols=24 Identities=29% Similarity=0.632 Sum_probs=20.3
Q ss_pred EEecCCcEEEEeCCc-cHHHHHhhc
Q 031133 14 VMKTDGKILEYKAPM-KVQDVLAEF 37 (165)
Q Consensus 14 V~~~dG~v~e~~~Pv-~a~evl~~~ 37 (165)
+|..||+..+|..+. ++++++.+.
T Consensus 1 ~I~vNG~~~~~~~~~~tl~~LL~~l 25 (65)
T d1tygb_ 1 MLQLNGKDVKWKKDTGTIQDLLASY 25 (65)
T ss_dssp CEEETTEEECCSSSCCBHHHHHHHT
T ss_pred CEEECCEEEEcCCCcccHHHHHHHc
Confidence 467899999998874 999999773
No 5
>d1eyla_ b.42.4.1 (A:) chymotrypsin inhibitor WCI {Winged bean (Psophocarpus tetragonolobus) [TaxId: 3891]}
Probab=40.63 E-value=6.6 Score=28.43 Aligned_cols=18 Identities=22% Similarity=0.381 Sum_probs=15.7
Q ss_pred CCCccCCCCeEEEeeCCC
Q 031133 54 PDFKLLGGNLYFLVPVPL 71 (165)
Q Consensus 54 ~de~L~~G~lYfLlP~~~ 71 (165)
.+++|++|.-||+||..+
T Consensus 10 ~G~~l~~G~~YYIlp~~~ 27 (179)
T d1eyla_ 10 EGNLVENGGTYYLLPHIW 27 (179)
T ss_dssp TSSBCBTTCEEEEEESSG
T ss_pred CCCCccCCCcEEEEEcee
Confidence 368899999999999875
No 6
>d1tiea_ b.42.4.1 (A:) Erythrina cafra trypsin inhibitor {Erythrina caffra [TaxId: 3842]}
Probab=40.23 E-value=6.9 Score=28.10 Aligned_cols=18 Identities=22% Similarity=0.412 Sum_probs=15.6
Q ss_pred CCCccCCCCeEEEeeCCC
Q 031133 54 PDFKLLGGNLYFLVPVPL 71 (165)
Q Consensus 54 ~de~L~~G~lYfLlP~~~ 71 (165)
.+++|++|.-||++|..+
T Consensus 6 ~G~~l~~G~~YYIlp~~~ 23 (170)
T d1tiea_ 6 NGEVVQNGGTYYLLPQVW 23 (170)
T ss_dssp TSCBCCTTCEEEEEESSG
T ss_pred CCCCccCCCcEEEEEeee
Confidence 367899999999999865
No 7
>d1wbaa_ b.42.4.1 (A:) Winged bean albumin 1 {Goa bean (Psophocarpus tetragonolobus) [TaxId: 3891]}
Probab=38.90 E-value=6.9 Score=28.03 Aligned_cols=19 Identities=21% Similarity=0.183 Sum_probs=16.1
Q ss_pred CCCccCCCCeEEEeeCCCC
Q 031133 54 PDFKLLGGNLYFLVPVPLP 72 (165)
Q Consensus 54 ~de~L~~G~lYfLlP~~~~ 72 (165)
.+++|++|.-||++|....
T Consensus 8 ~G~~l~~G~~YYI~p~~~g 26 (171)
T d1wbaa_ 8 EGNKLVNRGKYTIVSFSDG 26 (171)
T ss_dssp TSCBCBTTEEEEEEETTTC
T ss_pred CCCCCcCCCcEEEEEeecC
Confidence 3688999999999998653
No 8
>d1r8na_ b.42.4.1 (A:) Serine protease inhibitor DrTI {Royal poinciana (Delonix regia) [TaxId: 72433]}
Probab=38.42 E-value=7.4 Score=28.33 Aligned_cols=19 Identities=16% Similarity=0.464 Sum_probs=16.2
Q ss_pred CCCccCCCCeEEEeeCCCC
Q 031133 54 PDFKLLGGNLYFLVPVPLP 72 (165)
Q Consensus 54 ~de~L~~G~lYfLlP~~~~ 72 (165)
.+++|++|.-||++|..+.
T Consensus 10 ~G~~l~~G~~YYIlp~~~g 28 (185)
T d1r8na_ 10 EGYPVFLGSEYYIVSAIIG 28 (185)
T ss_dssp TSCBCBTTSEEEEEECTTS
T ss_pred CCCCccCCCcEEEEECccC
Confidence 3788999999999998753
No 9
>d3bx1c1 b.42.4.1 (C:1-181) Amylase/subtilisin inhibitor {Barley (Hordeum vulgare), seed [TaxId: 4513]}
Probab=35.55 E-value=8.8 Score=27.80 Aligned_cols=18 Identities=11% Similarity=0.252 Sum_probs=15.8
Q ss_pred CCCccCCCCeEEEeeCCC
Q 031133 54 PDFKLLGGNLYFLVPVPL 71 (165)
Q Consensus 54 ~de~L~~G~lYfLlP~~~ 71 (165)
.+++|++|.-||+||..+
T Consensus 10 ~G~~l~~G~~YYIlp~~~ 27 (181)
T d3bx1c1 10 DGHELRADANYYVLSANR 27 (181)
T ss_dssp TSCBCBTTCEEEEEESSG
T ss_pred CCCCCcCCCcEEEEEeee
Confidence 378899999999999875
No 10
>d1avwb_ b.42.4.1 (B:) Soybean trypsin inhibitor {Soybean (Glycine max) [TaxId: 3847]}
Probab=35.38 E-value=7.7 Score=28.01 Aligned_cols=19 Identities=16% Similarity=0.258 Sum_probs=15.9
Q ss_pred CCCccCCCCeEEEeeCCCC
Q 031133 54 PDFKLLGGNLYFLVPVPLP 72 (165)
Q Consensus 54 ~de~L~~G~lYfLlP~~~~ 72 (165)
.+++|++|.-||++|..+.
T Consensus 7 ~G~~l~~G~~YYIlp~~~g 25 (177)
T d1avwb_ 7 EGNPLENGGTYYILSDITA 25 (177)
T ss_dssp TSCBCBTTEEEEEEESSTT
T ss_pred CCCCccCCCcEEEEEeecC
Confidence 3688999999999997653
No 11
>g1r8o.1 b.42.4.1 (A:,B:) Two-chain trypsin inhibitor {Balsam copaiba (Copaifera langsdorffii) [TaxId: 280048]}
Probab=32.47 E-value=11 Score=26.90 Aligned_cols=19 Identities=16% Similarity=0.310 Sum_probs=15.2
Q ss_pred CCCccC-CCCeEEEeeCCCC
Q 031133 54 PDFKLL-GGNLYFLVPVPLP 72 (165)
Q Consensus 54 ~de~L~-~G~lYfLlP~~~~ 72 (165)
.+++|+ +|.-||++|..+.
T Consensus 6 ~G~~l~~~G~~YYIlp~~~g 25 (167)
T g1r8o.1 6 DGKPIENDGAEYYILPSVRG 25 (167)
T ss_dssp TSCCCBSSSSCEEEEESSSS
T ss_pred CCCEeecCCCcEEEEEeeeC
Confidence 367798 5999999998763
No 12
>d3e5ua1 a.4.5.4 (A:148-227) Chlorophenol reduction protein CprK {Desulfitobacterium hafniense [TaxId: 49338]}
Probab=28.79 E-value=6.6 Score=24.01 Aligned_cols=37 Identities=16% Similarity=0.246 Sum_probs=26.6
Q ss_pred CceEEEEEEEcHHHHHHHHHHhcCCcccHHHHHHHHhhcc
Q 031133 96 SSVVRIKVVISKQELQDLQMLQKGGVVSVQDVASWLQGKQ 135 (165)
Q Consensus 96 ~~~~rvKi~itk~~l~~l~~~~~~~~~s~e~~l~~l~~~~ 135 (165)
.+++.+.+.+|++||.. ++.-.. .++-.++..+.+.+
T Consensus 22 ~~~~~i~~~lt~~elA~--~~g~sr-etvsr~l~~l~~~g 58 (80)
T d3e5ua1 22 GDTYEITMPLSQKSIGE--ITGVHH-VTVSRVLASLKREN 58 (80)
T ss_dssp TTEEECCSCCCHHHHHH--HHTCCH-HHHHHHHHHHHHTT
T ss_pred CCCeEEeeCCCHHHHHH--HHCCCH-HHHHHHHHHHHHCC
Confidence 34578999999999999 553111 36777788887754
No 13
>d1shxa1 b.6.1.5 (A:32-170) Ephrin-a5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.65 E-value=32 Score=23.82 Aligned_cols=22 Identities=18% Similarity=0.398 Sum_probs=19.4
Q ss_pred ccCCCCCCccCCCCeEEEeeCC
Q 031133 49 IRHLMPDFKLLGGNLYFLVPVP 70 (165)
Q Consensus 49 ~~~L~~de~L~~G~lYfLlP~~ 70 (165)
+.|.+-+-|.++|+-||.+-.+
T Consensus 94 fsP~~~G~EF~pG~~YY~ISTs 115 (138)
T d1shxa1 94 FTPFSLGFEFRPGREYFYISSA 115 (138)
T ss_dssp CCSSTTCCCCCTTEEEEEEEEE
T ss_pred cCCCCCCeeecCCCEEEEEEee
Confidence 4788889999999999999775
No 14
>d1i5za1 a.4.5.4 (A:138-206) Catabolite gene activator protein (CAP), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=28.28 E-value=11 Score=22.26 Aligned_cols=33 Identities=15% Similarity=0.327 Sum_probs=23.6
Q ss_pred EEEEEEcHHHHHHHHHHhcCCcccHHHHHHHHhhcc
Q 031133 100 RIKVVISKQELQDLQMLQKGGVVSVQDVASWLQGKQ 135 (165)
Q Consensus 100 rvKi~itk~~l~~l~~~~~~~~~s~e~~l~~l~~~~ 135 (165)
.+.+.+|++||.. ++.-.. .++..+|..+.+.+
T Consensus 25 ~i~l~lt~~~lA~--~~G~sR-etvsr~L~~l~~~g 57 (69)
T d1i5za1 25 GMQIKITRQEIGQ--IVGCSR-ETVGRILKMLEDQN 57 (69)
T ss_dssp SCEEECCHHHHHH--HHTCCH-HHHHHHHHHHHHTT
T ss_pred eeecCCCHHHHHH--HHCCCH-HHHHHHHHHHHHCC
Confidence 3678899999999 553111 37788888887754
No 15
>d2uyzb1 d.15.1.1 (B:20-96) SUMO-1 (smt3 homologue) {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.50 E-value=30 Score=20.69 Aligned_cols=28 Identities=14% Similarity=0.380 Sum_probs=23.7
Q ss_pred eeEEEecCCcEEEE--eCCccHHHHHhhcC
Q 031133 11 VIKVMKTDGKILEY--KAPMKVQDVLAEFA 38 (165)
Q Consensus 11 ~iKV~~~dG~v~e~--~~Pv~a~evl~~~P 38 (165)
++||...||+...| +...+++.|+..|.
T Consensus 4 ~ikv~~~dg~~v~f~v~~~t~l~kl~~~y~ 33 (77)
T d2uyzb1 4 KLKVIGQDSSEIHFKVKMTTHLKKLKESYC 33 (77)
T ss_dssp EEEEECTTCCEEEEEEETTSCTHHHHHHHH
T ss_pred EEEEECCCCCEEEEEECCCChHHHHHHHHH
Confidence 58999999999777 67888899998875
No 16
>d1wgra_ d.15.1.5 (A:) Growth factor receptor-bound protein 7, GRB-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.79 E-value=44 Score=21.10 Aligned_cols=30 Identities=27% Similarity=0.304 Sum_probs=24.9
Q ss_pred CCCceeEEEecCC--cEEEEeCCccHHHHHhh
Q 031133 7 LEEKVIKVMKTDG--KILEYKAPMKVQDVLAE 36 (165)
Q Consensus 7 ~~~~~iKV~~~dG--~v~e~~~Pv~a~evl~~ 36 (165)
.+...+||...|| +.+.+..-.||.||+..
T Consensus 7 ~~~~vvkv~~~dg~~k~l~V~~~tTa~eV~~~ 38 (100)
T d1wgra_ 7 GRPHVVKVYSEDGACRSVEVAAGATARHVCEM 38 (100)
T ss_dssp CSCEEEEEEETTSCEEEEEECTTCCHHHHHHH
T ss_pred CCceEEEEEecCCCEEEEEECCCCcHHHHHHH
Confidence 3567789999999 56788999999998865
No 17
>d2cu3a1 d.15.3.2 (A:1-63) Uncharacterised protein TTHA0675 {Thermus thermophilus [TaxId: 274]}
Probab=22.78 E-value=17 Score=21.52 Aligned_cols=23 Identities=17% Similarity=0.291 Sum_probs=19.2
Q ss_pred EEecCCcEEEEeCCccHHHHHhhc
Q 031133 14 VMKTDGKILEYKAPMKVQDVLAEF 37 (165)
Q Consensus 14 V~~~dG~v~e~~~Pv~a~evl~~~ 37 (165)
+|..||+..++. ..++.+++.++
T Consensus 1 ~I~vNGe~~~~~-~~tl~~LL~~l 23 (63)
T d2cu3a1 1 MVWLNGEPRPLE-GKTLKEVLEEM 23 (63)
T ss_dssp CEEETTEEECCT-TCCHHHHHHHH
T ss_pred CEEECCEEEEcC-CCCHHHHHHHc
Confidence 477899999995 78999999763
Done!