Query 031152
Match_columns 165
No_of_seqs 130 out of 1171
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 15:48:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031152.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031152hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1a58_A Cyclophilin; isomerase, 100.0 1.4E-49 4.9E-54 300.4 17.0 150 8-157 21-177 (177)
2 2igv_A Peptidyl-prolyl CIS-tra 100.0 1.2E-49 4.2E-54 299.8 16.1 151 7-158 17-173 (173)
3 2wfi_A Peptidyl-prolyl CIS-tra 100.0 2.8E-49 9.5E-54 299.2 16.8 149 8-156 24-179 (179)
4 2he9_A NK-tumor recognition pr 100.0 6.2E-49 2.1E-53 300.0 16.8 151 8-158 34-191 (192)
5 1qng_A Peptidyl-prolyl CIS-tra 100.0 6.8E-49 2.3E-53 295.0 14.8 148 7-156 17-170 (170)
6 2poy_A Peptidyl-prolyl CIS-tra 100.0 1.7E-48 5.7E-53 296.3 15.3 148 7-155 33-186 (186)
7 1mzw_A Cyclophilin H, U-snRNP- 100.0 1.2E-48 4.2E-53 295.2 13.4 148 7-156 24-177 (177)
8 3ich_A Peptidyl-prolyl CIS-tra 100.0 3.7E-48 1.3E-52 294.9 14.2 150 8-164 30-187 (188)
9 2cmt_A Peptidyl-prolyl CIS-tra 100.0 2.4E-47 8.3E-52 286.8 16.1 142 8-157 25-172 (172)
10 2z6w_A Peptidyl-prolyl CIS-tra 100.0 2.5E-47 8.5E-52 285.2 15.9 142 8-157 18-165 (165)
11 2r99_A Peptidyl-prolyl CIS-tra 100.0 3E-47 1E-51 286.7 16.3 142 8-157 26-173 (173)
12 2haq_A Cyclophilin; rotamase, 100.0 1.4E-47 4.8E-52 287.9 14.2 141 8-156 26-172 (172)
13 3pmp_A Cyclophilin A; peptidyl 100.0 7.8E-47 2.7E-51 282.4 16.2 143 7-157 16-164 (164)
14 2poe_A Cyclophilin-like protei 100.0 6.6E-47 2.2E-51 287.4 14.8 146 8-164 26-182 (185)
15 4fru_A Cyclophilin B, peptidyl 100.0 1.6E-46 5.4E-51 285.6 15.2 144 7-157 26-175 (185)
16 1z81_A Cyclophilin; structural 100.0 7.4E-47 2.5E-51 294.8 13.5 147 8-156 74-229 (229)
17 2ok3_A Peptidyl-prolyl CIS-tra 100.0 2.3E-46 8E-51 279.0 14.6 144 8-162 10-161 (161)
18 3rdd_A Peptidyl-prolyl CIS-tra 100.0 5.4E-46 1.8E-50 282.2 15.4 143 7-157 36-184 (184)
19 3bo7_A Peptidyl-prolyl CIS-tra 100.0 3.9E-46 1.3E-50 286.6 14.3 147 8-165 16-181 (201)
20 1zkc_A Peptidyl-prolyl CIS-tra 100.0 2.5E-46 8.6E-51 286.2 12.5 146 8-164 29-182 (197)
21 2c3b_A Ppiase, cyclophilin; is 100.0 1.1E-46 3.9E-51 283.3 9.8 142 8-156 22-172 (172)
22 3k2c_A Peptidyl-prolyl CIS-tra 100.0 2.1E-45 7.3E-50 280.7 16.4 143 7-157 41-191 (193)
23 2fu0_A Cyclophilin, putative; 100.0 2.2E-45 7.4E-50 273.4 13.9 138 8-156 15-159 (160)
24 2b71_A Cyclophilin-like protei 100.0 2.8E-45 9.7E-50 280.3 14.6 141 8-159 48-195 (196)
25 1w74_A Peptidyl-prolyl CIS-tra 100.0 3.5E-45 1.2E-49 278.9 14.8 145 8-156 33-191 (191)
26 2x7k_A Peptidyl-prolyl CIS-tra 100.0 3.2E-45 1.1E-49 273.9 13.2 138 8-156 21-165 (166)
27 2ose_A Probable peptidyl-proly 100.0 1.6E-45 5.6E-50 288.6 10.5 157 7-165 28-215 (234)
28 2k7n_A Peptidyl-prolyl CIS-tra 100.0 1.5E-44 5E-49 277.4 13.4 143 9-162 22-171 (203)
29 2a2n_A Peptidylprolyl isomeras 100.0 2.9E-44 9.8E-49 270.9 14.0 137 8-155 31-175 (176)
30 1ihg_A Cyclophilin 40; ppiase 100.0 4.4E-44 1.5E-48 296.6 15.9 151 8-159 30-187 (370)
31 2hq6_A Serologically defined c 100.0 1.1E-43 3.7E-48 269.6 13.2 143 8-162 34-185 (185)
32 3bkp_A Cyclophilin; malaria, i 100.0 1.8E-42 6.1E-47 270.9 12.9 144 8-163 31-199 (232)
33 1lop_A Cyclophilin A; rotamase 100.0 1.3E-42 4.4E-47 259.5 9.3 136 8-157 9-164 (164)
34 1v9t_A Cyclophilin B; beta bar 100.0 4.7E-42 1.6E-46 256.9 11.2 137 8-157 14-166 (166)
35 3s6m_A Peptidyl-prolyl CIS-tra 100.0 1.7E-41 5.7E-46 254.2 10.4 135 8-156 13-167 (167)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 1.2E-34 4.1E-39 238.9 2.9 128 7-152 187-355 (369)
37 3kop_A Uncharacterized protein 75.6 6 0.0002 29.2 5.5 32 101-134 127-166 (188)
38 2k9u_B Filamin-binding LIM pro 61.7 4.4 0.00015 19.9 1.5 20 91-110 1-20 (26)
39 1zx8_A Hypothetical protein TM 56.0 9.8 0.00034 26.6 3.2 45 85-134 74-124 (136)
40 2nnz_A Hypothetical protein; b 36.6 29 0.001 24.6 3.2 47 83-134 91-143 (153)
41 1x7f_A Outer surface protein; 26.5 30 0.001 28.4 2.0 50 84-134 326-376 (385)
42 2p0o_A Hypothetical protein DU 23.7 30 0.001 28.3 1.5 50 84-134 300-350 (372)
No 1
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=1.4e-49 Score=300.38 Aligned_cols=150 Identities=47% Similarity=0.776 Sum_probs=141.0
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCCC-CCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCcc
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGAS-GKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFK 80 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~~-~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~~ 80 (165)
=||+||||++.|| +.||++++|.+.. ++++||+|+.||||+|+|+|||||++.++++++.++|+..+++|+..
T Consensus 21 G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~~ 100 (177)
T 1a58_A 21 GRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTGGESIYGGMFDDEEFV 100 (177)
T ss_dssp EEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSSSSCCCCTTSSCBCCCCCC
T ss_pred eeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCCCCCCCcccCCcccCcccC
Confidence 4899999999999 8899988876533 45669999999999999999999998889999999999999999999
Q ss_pred ccCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCcceEEeeeeeec
Q 031152 81 IKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEIP 157 (165)
Q Consensus 81 ~~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~~~P~~~i~I~~cg~l~ 157 (165)
++|+.+|+||||+.+|++++||||||+.++|+||++|+|||+|++|||||++|++.+++.+++|.++|+|.+||+|.
T Consensus 101 ~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~~~~P~~~v~I~~~G~l~ 177 (177)
T 1a58_A 101 MKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRPLADVVILNCGELV 177 (177)
T ss_dssp SCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEEEC
T ss_pred cccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCCCCcCCCCeEEEEeEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999984
No 2
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=1.2e-49 Score=299.79 Aligned_cols=151 Identities=54% Similarity=0.956 Sum_probs=141.5
Q ss_pred eEEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCcc
Q 031152 7 KLLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFK 80 (165)
Q Consensus 7 ~~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~~ 80 (165)
.=||+||||++.|| +.||++++|++..++.+||+|+.||||+|+|+|||||++.++++++.++|+..+++|+..
T Consensus 17 ~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~siyg~~f~dE~~~ 96 (173)
T 2igv_A 17 SGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYGEKFPDENFK 96 (173)
T ss_dssp EEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCCC
T ss_pred cceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCCCCccCCCcccCcccc
Confidence 34899999999999 889998888777778889999999999999999999998888999999999999999999
Q ss_pred ccCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCcceEEeeeeeecC
Q 031152 81 IKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEIPK 158 (165)
Q Consensus 81 ~~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~~~P~~~i~I~~cg~l~~ 158 (165)
++|+++|+||||+.+|++++||||||+.++|+||++|+|||+|++|||||++|++..+ .+++|.++|+|.+||+|++
T Consensus 97 l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t-~~~~P~~~v~I~~~g~l~~ 173 (173)
T 2igv_A 97 EKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGS-QSGKPVKDCMIADCGQLKA 173 (173)
T ss_dssp SCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTSCCSSCEEEEEEEEECC
T ss_pred cCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCC-CCCCCCCCEEEEEeEEEcC
Confidence 9999999999999999999999999999999999999999999999999999997766 5789999999999999963
No 3
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=2.8e-49 Score=299.22 Aligned_cols=149 Identities=46% Similarity=0.758 Sum_probs=140.9
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCC-CCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCcc
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGA-SGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFK 80 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~-~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~~ 80 (165)
=||+||||++.|| +.||+|++|.+. .++.+||+|+.||||+|+|+|||||+..+++.++.++|+..+++|+..
T Consensus 24 G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~~ 103 (179)
T 2wfi_A 24 GRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFA 103 (179)
T ss_dssp EEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSSSCCCCTTSSCBCCCCCC
T ss_pred eEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCCCCCCCCcccCCcccccccC
Confidence 4899999999999 889999887652 356789999999999999999999998888999999999999999999
Q ss_pred ccCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCcceEEeeeeee
Q 031152 81 IKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEI 156 (165)
Q Consensus 81 ~~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~~~P~~~i~I~~cg~l 156 (165)
++|+++|+||||+.+|++++||||||+.++|+||++|+|||||++|||||++|++.+++.+++|.++|+|.+||+|
T Consensus 104 ~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~G~l 179 (179)
T 2wfi_A 104 VKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILSCGEL 179 (179)
T ss_dssp SCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTSCBSSCEEEEEEEEC
T ss_pred cCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCCCCCCCCCeEEEeCeeC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999986
No 4
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.2e-49 Score=299.98 Aligned_cols=151 Identities=46% Similarity=0.732 Sum_probs=141.9
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCC-CCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCcc
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGA-SGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFK 80 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~-~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~~ 80 (165)
=||+||||++.|| +.||+|++|.+. .++.+||+|+.||||+|+|+|||||++.+++.++.++||..+++|+..
T Consensus 34 G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~~G~gg~siyg~~f~dE~~~ 113 (192)
T 2he9_A 34 GRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFI 113 (192)
T ss_dssp EEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSSSCCCCTTSSCBCCCCCC
T ss_pred ceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccCCCCCCCCcccCCcccCcccc
Confidence 4899999999999 889999887652 356789999999999999999999998888999999999999999999
Q ss_pred ccCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCcceEEeeeeeecC
Q 031152 81 IKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEIPK 158 (165)
Q Consensus 81 ~~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~~~P~~~i~I~~cg~l~~ 158 (165)
++|+++|+||||+.+|++++||||||+.++|+||++|+|||+|++|||||++|++.+++.+++|..+|+|.+||+|.+
T Consensus 114 l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~g~l~~ 191 (192)
T 2he9_A 114 LKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVIDCGVLAT 191 (192)
T ss_dssp SCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEECC-
T ss_pred CCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcCCCCCCcCCeEEEEeEEEcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999964
No 5
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=6.8e-49 Score=294.96 Aligned_cols=148 Identities=48% Similarity=0.828 Sum_probs=138.2
Q ss_pred eEEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCcc
Q 031152 7 KLLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFK 80 (165)
Q Consensus 7 ~~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~~ 80 (165)
.=||+||||++.|| +.||+++ |++..++..+|+|+.||||+|+|+|||||++.++++++.++|+..+++|+..
T Consensus 17 ~G~i~ieL~~~~aP~t~~NF~~L~~~~-g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~~ 95 (170)
T 1qng_A 17 AGRIIFELFSDITPRTCENFRALCTGE-KIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSGGESIYGRSFTDENFN 95 (170)
T ss_dssp EEEEEEEECTTTCHHHHHHHHHHHHTC-EECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCCC
T ss_pred ceeEEEEEcCCCCCHHHHHHHHHhccC-CcCccCccceECCCEEEEEECCCEEEcCCccCCCCCCCccccCCcccccccc
Confidence 45899999999999 7788765 5555677788999999999999999999998888999999999999999999
Q ss_pred ccCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCcceEEeeeeee
Q 031152 81 IKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEI 156 (165)
Q Consensus 81 ~~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~~~P~~~i~I~~cg~l 156 (165)
++|+++|+||||+.+|++++||||||+.++|+||++|+|||+|++|||||++|++.++ .+++|.++|+|.+||+|
T Consensus 96 l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t-~~~~P~~~v~I~~cG~l 170 (170)
T 1qng_A 96 MKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGA-KSGYVKRSVVITDCGEL 170 (170)
T ss_dssp SCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTCCCSSCEEEEEEEEC
T ss_pred cccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCC-CCCCCCCCeEEEeceeC
Confidence 9999999999999999999999999999999999999999999999999999998887 78999999999999986
No 6
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=1.7e-48 Score=296.25 Aligned_cols=148 Identities=52% Similarity=0.852 Sum_probs=139.0
Q ss_pred eEEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCcc
Q 031152 7 KLLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFK 80 (165)
Q Consensus 7 ~~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~~ 80 (165)
.=||+||||++.|| +.||++++|++..++.++|+|+.||||+|+|+|||||++.++++++.++|+..+++|+..
T Consensus 33 ~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~G~gg~si~g~~f~dE~~~ 112 (186)
T 2poy_A 33 AGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDGTGGESIYGSKFRDENFV 112 (186)
T ss_dssp EEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSCCCCTTC-CBCCCCCC
T ss_pred cccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCCCCCCCCccCCCcccCcccc
Confidence 34899999999999 889998888877788889999999999999999999998888999999999999999999
Q ss_pred ccCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCcceEEeeeee
Q 031152 81 IKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGE 155 (165)
Q Consensus 81 ~~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~~~P~~~i~I~~cg~ 155 (165)
++|+++|+||||+.+|++++||||||+.++|+||++|+|||+|++|||||++|++.++ .+++|.++|+|.+||+
T Consensus 113 l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t-~~~~P~~~v~I~~cG~ 186 (186)
T 2poy_A 113 YTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGS-QNGKPTKSVCITASGV 186 (186)
T ss_dssp SCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC-TTSCCSSCEEEEEEEC
T ss_pred cccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCC-CCCCCCCCEEEEeCCC
Confidence 9999999999999999999999999999999999999999999999999999998877 6789999999999995
No 7
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=1.2e-48 Score=295.23 Aligned_cols=148 Identities=47% Similarity=0.790 Sum_probs=138.1
Q ss_pred eEEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCcc
Q 031152 7 KLLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFK 80 (165)
Q Consensus 7 ~~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~~ 80 (165)
.=||+||||++.|| +.||++..|. .++..+|+|+.||||+|+|+|||||+..++++++.++|+..+++|+..
T Consensus 24 ~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~--~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~g~~f~dE~~~ 101 (177)
T 1mzw_A 24 VGRMKIELFADVVPKTAENFRQFCTGEFRK--DGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFK 101 (177)
T ss_dssp EEEEEEEECTTTCHHHHHHHHHHHHTCCEE--TTEECSSTTCBCCEEETTTEEEECCTTTSSSCCCCCTTSSCBCCCCCC
T ss_pred ceeEEEEEcCCCCcHHHHHHHHHHhcccCC--cCccceECCCEEEEEECCCEEEcCCcccCCCCCCCccCCCcccCcccc
Confidence 34899999999999 7788776543 346667999999999999999999998889999999999999999999
Q ss_pred ccCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCcceEEeeeeee
Q 031152 81 IKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEI 156 (165)
Q Consensus 81 ~~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~~~P~~~i~I~~cg~l 156 (165)
++|+++|+||||+.+|++++|||||++.++|+||++|+|||||++|||||++|++.+++.+++|.++|+|.+||+|
T Consensus 102 l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~cG~l 177 (177)
T 1mzw_A 102 LRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177 (177)
T ss_dssp SCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCEEEEEEEEC
T ss_pred cccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCCCCCEEEEeceeC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999986
No 8
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=3.7e-48 Score=294.94 Aligned_cols=150 Identities=53% Similarity=0.844 Sum_probs=139.4
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCccc
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKI 81 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~~~ 81 (165)
=||+||||.+.|| +.||++++|++ |+|+.||||+|+|+|||||+..+++.++.++||..+++|+..+
T Consensus 30 G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~-------Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~~l 102 (188)
T 3ich_A 30 GRVIFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKL 102 (188)
T ss_dssp EEEEEEECTTTCHHHHHHHHHHHHTTTSCS-------STTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCCCS
T ss_pred eeEEEEEcCCCCcHHHHHHHHHhcccCCcc-------ccCCEEEEEECCCEEEcCCccCCCCCCCccccCCcccccccCc
Confidence 4899999999999 78998777643 9999999999999999999777889999999999999998899
Q ss_pred cCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCcceEEeeeeee--cCC
Q 031152 82 KHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEI--PKN 159 (165)
Q Consensus 82 ~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~~~P~~~i~I~~cg~l--~~~ 159 (165)
+|+.+|+||||+.++++++||||||+.++|+||++|+|||||++||+||++|++..++..++|.++|+|.+|++| ++|
T Consensus 103 ~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~~P~~~v~I~~~~~l~~~~P 182 (188)
T 3ich_A 103 KHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGKIEVEKP 182 (188)
T ss_dssp CCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEEEEEEEE
T ss_pred ccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCeECCCEEEEEeEEEecCCC
Confidence 999999999999999999999999999999999999999999999999999999999988999999999999998 566
Q ss_pred CCCCC
Q 031152 160 KWDEE 164 (165)
Q Consensus 160 ~~~~e 164 (165)
+.+++
T Consensus 183 f~~~~ 187 (188)
T 3ich_A 183 FAIAK 187 (188)
T ss_dssp EECCC
T ss_pred CCCCC
Confidence 66554
No 9
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=2.4e-47 Score=286.84 Aligned_cols=142 Identities=46% Similarity=0.797 Sum_probs=132.6
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCccc
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKI 81 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~~~ 81 (165)
=||+||||++.|| +.||++++|++ |+|+.||||+|+|+|||||+..++++++.++|+..+++|+..+
T Consensus 25 G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~-------Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~g~~f~dE~~~l 97 (172)
T 2cmt_A 25 GRIVMELRSDIVPRTAENFRALCTGERGFG-------YHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQL 97 (172)
T ss_dssp EEEEEEECTTTCHHHHHHHHHHHHTTTSCS-------STTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCCCS
T ss_pred ceEEEEEcCCCCCHHHHHHHHHhccCCCce-------ECCCEEEEEECCCEEEcCCccCCCCCCCCccCCCcccccccCc
Confidence 4899999999999 78897766632 9999999999999999999988889999999999999999999
Q ss_pred cCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCcceEEeeeeeec
Q 031152 82 KHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEIP 157 (165)
Q Consensus 82 ~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~~~P~~~i~I~~cg~l~ 157 (165)
+|+++|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|++.++ ++++|.++|+|.+||+|+
T Consensus 98 ~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~-~~~~P~~~v~I~~~g~l~ 172 (172)
T 2cmt_A 98 RHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGS-KSGKVKEPVIISRCGELI 172 (172)
T ss_dssp CCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCC-TTCCCSSCEEEEEEEEEC
T ss_pred ccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCC-CCCCCCCCEEEEEeEeEC
Confidence 999999999999999999999999999999999999999999999999999997766 568999999999999984
No 10
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=2.5e-47 Score=285.20 Aligned_cols=142 Identities=49% Similarity=0.856 Sum_probs=133.0
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCccc
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKI 81 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~~~ 81 (165)
=||+||||++.|| +.||+|++|++ |+|+.||||+|+|+|||||++.++++++.++|+..+++|+..+
T Consensus 18 G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~-------Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~~l 90 (165)
T 2z6w_A 18 GRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTL 90 (165)
T ss_dssp EEEEEEECTTTCHHHHHHHHHHHHTTTSCC-------STTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCCCS
T ss_pred eEEEEEEeCCCCcHHHHHHHHHhccCCCcc-------CcCCEEEEEECCCEEEeCCccCCCCCCCCcccCCcccCccccc
Confidence 4899999999999 78998776643 9999999999999999999988889999999999999999899
Q ss_pred cCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCcceEEeeeeeec
Q 031152 82 KHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEIP 157 (165)
Q Consensus 82 ~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~~~P~~~i~I~~cg~l~ 157 (165)
+|+++|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|++.. +.+++|.++|+|.+||+|.
T Consensus 91 ~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~-~~~~~P~~~v~I~~~g~l~ 165 (165)
T 2z6w_A 91 KHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFG-SKSGRTSKKIVITDCGQLS 165 (165)
T ss_dssp CCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTC-CTTSCCSSCEEEEEEEECC
T ss_pred ccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCC-CCCCCCCCcEEEEEeEEEC
Confidence 99999999999999999999999999999999999999999999999999999776 5789999999999999984
No 11
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=3e-47 Score=286.68 Aligned_cols=142 Identities=49% Similarity=0.802 Sum_probs=132.8
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCccc
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKI 81 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~~~ 81 (165)
=||+||||++.|| +.||++++|++ |+|+.||||+|+|+|||||++.++++++.++|+..+++|+..+
T Consensus 26 G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~-------Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~~l 98 (173)
T 2r99_A 26 GRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFIL 98 (173)
T ss_dssp EEEEEEECTTTCHHHHHHHHHHHHTTTSCC-------STTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCCCS
T ss_pred eeEEEEECCCCCcHHHHHHHHHhcccCCce-------ecCCEEEEeeCCCEEEeCCcCCCCCCCCCccCCCcccCcccCc
Confidence 4899999999999 78998777642 9999999999999999999988889999999999999999999
Q ss_pred cCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCcceEEeeeeeec
Q 031152 82 KHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEIP 157 (165)
Q Consensus 82 ~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~~~P~~~i~I~~cg~l~ 157 (165)
+|+.+|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|++..+ .+++|.++|+|.+||+|+
T Consensus 99 ~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~-~~~~P~~~v~I~~cG~l~ 173 (173)
T 2r99_A 99 KHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGS-KDGKPKQKVIIADCGEYV 173 (173)
T ss_dssp CCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTCCCSSCEEEEEEEECC
T ss_pred ccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCC-CCCCCCCCeEEEEeeeEC
Confidence 999999999999999999999999999999999999999999999999999997665 468999999999999984
No 12
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=1.4e-47 Score=287.93 Aligned_cols=141 Identities=48% Similarity=0.802 Sum_probs=133.8
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCccc
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKI 81 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~~~ 81 (165)
=||+||||++.|| +.||+|++|++ |+|+.||||+|+|+|||||+..+++.++.++|+..+++|+..+
T Consensus 26 G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~-------Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~~l 98 (172)
T 2haq_A 26 GRITIGLFGKDAPLTTENFRQLCTGEHGFG-------YKDSIFHRVIQNFMIQGGDFTNFDGTGGKSIYGEKFADENLNV 98 (172)
T ss_dssp EEEEEEECTTTCHHHHHHHHHHHHTTTSCC-------STTCBCCEEETTTEEEECCTTTSSSSCCCCSSSSCBCCCCCCS
T ss_pred ceEEEEEeCCCCcHHHHHHHHHhccCCCcc-------cCCCEEEEEECCCEEecCCccCCCCCCCccccCCcccCcCCCc
Confidence 4899999999999 78998877643 9999999999999999999877889999999999999998899
Q ss_pred cCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCcceEEeeeeee
Q 031152 82 KHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEI 156 (165)
Q Consensus 82 ~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~~~P~~~i~I~~cg~l 156 (165)
+|+ +|+||||+.+|++++|||||++.++|+||++|+|||||++|||||++|++.+++..++|.++|+|.+||+|
T Consensus 99 ~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~g~l 172 (172)
T 2haq_A 99 KHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHDRPVKPVKIVASGEL 172 (172)
T ss_dssp CCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCEEEEEEEEC
T ss_pred ccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCCcCCCCeEEEEeEEC
Confidence 999 99999999999999999999999999999999999999999999999999999988999999999999986
No 13
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=7.8e-47 Score=282.36 Aligned_cols=143 Identities=46% Similarity=0.844 Sum_probs=133.4
Q ss_pred eEEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCcc
Q 031152 7 KLLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFK 80 (165)
Q Consensus 7 ~~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~~ 80 (165)
.=||+||||++.|| +.||++++|++ |+|+.|||++|+|+|||||+...++.++.++|+..+++|+..
T Consensus 16 ~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~-------Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~~~dE~~~ 88 (164)
T 3pmp_A 16 EGRIVFKLYDEAVPKTAKNFRELATGQHGFG-------YKDSIFHRVIPQFMLQGGDFTRHNGTGGKSIYGEKFADENFQ 88 (164)
T ss_dssp EEEEEEEECTTTCHHHHHHHHHHHHTTTSCS-------STTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCCC
T ss_pred eeEEEEEEeCCCCcHHHHHHHHHhcccCCCc-------ccCCEEEEEECCCeEEeCCCCCCCCCCCcccCCccccccccc
Confidence 34899999999999 78998777643 999999999999999999987889999999999999999999
Q ss_pred ccCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCcceEEeeeeeec
Q 031152 81 IKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEIP 157 (165)
Q Consensus 81 ~~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~~~P~~~i~I~~cg~l~ 157 (165)
++|+++|+||||+.++++++|||||++.++|+||++|+|||||++|||||++|++.+++ +++|.++|+|.+||+|.
T Consensus 89 l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~-~~~P~~~v~I~~cg~l~ 164 (164)
T 3pmp_A 89 VKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSA-SGKTNATIKITDCGTVA 164 (164)
T ss_dssp SCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCSSCEEEEEEEEC-
T ss_pred cCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCC-CCCcccCEEEEeCeEEC
Confidence 99999999999999999999999999999999999999999999999999999987765 79999999999999984
No 14
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=6.6e-47 Score=287.39 Aligned_cols=146 Identities=38% Similarity=0.563 Sum_probs=132.3
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCC-cc
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDEN-FK 80 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~-~~ 80 (165)
=||+||||++.|| +.||+ .| ||+|+.||||+|+|+|||||++ +++.++.++||..+++|+ ..
T Consensus 26 G~i~ieL~~~~aP~t~~NF~~L~~--~g--------~Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~~~ 94 (185)
T 2poe_A 26 GDLKFELFCSQCPKACKNFLALSA--SG--------YYKNTIFHKNIKGFIIQGGDPT-GTGKGGESIYGRYFDDEIYPE 94 (185)
T ss_dssp EEEEEEECTTTCHHHHHHHHHHHH--TT--------TTTTEEEEEECTTSEEEEEETT-SSSSCCCBTTBSCBCCCCCTT
T ss_pred ccEEEEEeCCCCcHHHHHHHHHhc--cC--------CCCCCEEEEEECCCEEEcCCCC-CCCCCCCccCCCcccccccCC
Confidence 4899999999999 66773 33 6999999999999999999996 778889999999999997 68
Q ss_pred ccCCcceEEEEecCC----CCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCcceEEeeeeee
Q 031152 81 IKHSHAGVVSMVNSG----PDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEI 156 (165)
Q Consensus 81 ~~h~~~G~lsm~~~~----~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~~~P~~~i~I~~cg~l 156 (165)
++|+.+|+||||+.+ |++++|||||++.++|+||++|+|||+|++||+||++|++.+++.+++|.++|+|.+|+++
T Consensus 95 l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~~i~ 174 (185)
T 2poe_A 95 LKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKDIVIH 174 (185)
T ss_dssp SCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTSCBSSCCEEEEEEEE
T ss_pred CccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCcCCCeEEEEEEEE
Confidence 899899999999998 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCC
Q 031152 157 PKNKWDEE 164 (165)
Q Consensus 157 ~~~~~~~e 164 (165)
.+|+.|+|
T Consensus 175 ~dPf~d~~ 182 (185)
T 2poe_A 175 SNPIADQE 182 (185)
T ss_dssp CCC-----
T ss_pred CCCCCCcc
Confidence 99998876
No 15
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=1.6e-46 Score=285.62 Aligned_cols=144 Identities=53% Similarity=0.871 Sum_probs=136.4
Q ss_pred eEEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCcc
Q 031152 7 KLLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFK 80 (165)
Q Consensus 7 ~~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~~ 80 (165)
.=||+||||++.|| +.||++++|. ||+|+.||||+|+|+|||||++.+++.++.++|+..+++|+..
T Consensus 26 ~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~-------~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~de~~~ 98 (185)
T 4fru_A 26 IGRVVIGLFGKTVPKTVDNFVALATGEKGF-------GYKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFK 98 (185)
T ss_dssp EEEEEEEECTTTSHHHHHHHHHHHHTTTSC-------CSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCCC
T ss_pred cceEEEEEeCCCCcHHHHHHHHHHhcCCCC-------eEcCCEEEEeeCCCeEEECCCCCCCCCCCccccCCccCccccc
Confidence 34899999999999 7789876663 4999999999999999999998899999999999999999999
Q ss_pred ccCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCcceEEeeeeeec
Q 031152 81 IKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEIP 157 (165)
Q Consensus 81 ~~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~~~P~~~i~I~~cg~l~ 157 (165)
++|+.+|+||||+.++++++|||||++.++|+||++|+|||||++|||||++|++.+++.+++|.++|+|.+||+|.
T Consensus 99 ~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~g~l~ 175 (185)
T 4fru_A 99 LKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRDKPLKDVTIADCGKIE 175 (185)
T ss_dssp SCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEEEE
T ss_pred cCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCCcCCCCEEEEEceEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999986
No 16
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=7.4e-47 Score=294.76 Aligned_cols=147 Identities=41% Similarity=0.688 Sum_probs=138.1
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCccc
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKI 81 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~~~ 81 (165)
=||+||||++.|| +.||++.+|.+ ++..||+|+.||||+|+|+|||||++.+++.++.++|+..+++|+..+
T Consensus 74 G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~--g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~Gg~siyg~~f~dE~~~l 151 (229)
T 1z81_A 74 GKFKFELFQNIVPKTSENFRQFCTGEYKVN--NLPVGYKNTIFHRVIKEFMIQGGDFINHNGSGSLSIYGEKFDDENFDI 151 (229)
T ss_dssp EEEEEEECTTTCHHHHHHHHHHHHTCCBSS--SSBCSSTTEECCEEETTTEEEECCTTTSSSCCCCBTTBSCCCCCCCCS
T ss_pred ccEEEEEcCCCCCHHHHHHHHHhhCCCCCc--CCCceECCCEEEEEeCCCEEEcCCCcCCCCCCCCccCCCccccccccc
Confidence 4899999999999 78898776543 566789999999999999999999988899999999999999999999
Q ss_pred cCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEE--cCHHHHHHHhcCCCCCC-CCCCcceEEeeeeee
Q 031152 82 KHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVI--QGMDTVYAIEGGAGTYS-GKPRKKVTIADSGEI 156 (165)
Q Consensus 82 ~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi--~G~evl~~I~~~~~~~~-~~P~~~i~I~~cg~l 156 (165)
+|+.+|+||||+.+|++++||||||+.++|+||++|+|||||+ +|||||++|++..++.+ ++|.++|+|.+||+|
T Consensus 152 ~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~~~~P~~~V~I~~cG~l 229 (229)
T 1z81_A 152 KHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPYIYKPKIPINVVECGEL 229 (229)
T ss_dssp CCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTTTCCBSSCEEEEEEEEC
T ss_pred ccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCCCCCCCCCeEEEeCeeC
Confidence 9999999999999999999999999999999999999999999 99999999999999887 999999999999986
No 17
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=2.3e-46 Score=278.99 Aligned_cols=144 Identities=36% Similarity=0.486 Sum_probs=133.2
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCc-c
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENF-K 80 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~-~ 80 (165)
=||+||||++.|| +.||+ . +||+|+.||||+|+|+|||||+. +++.++.++|+..+++|.. .
T Consensus 10 G~i~ieL~~~~aP~t~~NF~~L~~--~--------g~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~~~ 78 (161)
T 2ok3_A 10 GDIKIEVFCERTPKTCENFLALCA--S--------NYYNGCIFHRNIKGFMVQTGDPT-GTGRGGNSIWGKKFEDEYSEY 78 (161)
T ss_dssp EEEEEEECTTTCHHHHHHHHHHHH--T--------TTTTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCCCTT
T ss_pred ccEEEEEcCCCCcHHHHHHHHHhh--h--------cccCCCEEEEEECCCEEecCCCC-CCCCCCCcccCCccccccCcC
Confidence 4899999999999 66773 2 36999999999999999999996 7788899999999999975 7
Q ss_pred ccCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCC-CCCCcceEEeeeeeecCC
Q 031152 81 IKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYS-GKPRKKVTIADSGEIPKN 159 (165)
Q Consensus 81 ~~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~-~~P~~~i~I~~cg~l~~~ 159 (165)
++|+.+|+||||+.++++++|||||++.++|+||++|+|||+|++||+||++|++.+++.+ ++|.++|+|.+|.++.+|
T Consensus 79 l~h~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I~~~~i~~~P 158 (161)
T 2ok3_A 79 LKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANP 158 (161)
T ss_dssp CCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBEEEEEEECCS
T ss_pred cCcCCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEEEEEEEecCC
Confidence 8998999999999999999999999999999999999999999999999999999999887 999999999999999988
Q ss_pred CCC
Q 031152 160 KWD 162 (165)
Q Consensus 160 ~~~ 162 (165)
+.|
T Consensus 159 f~d 161 (161)
T 2ok3_A 159 FAQ 161 (161)
T ss_dssp CC-
T ss_pred CCC
Confidence 764
No 18
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=5.4e-46 Score=282.24 Aligned_cols=143 Identities=51% Similarity=0.839 Sum_probs=133.7
Q ss_pred eEEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCcc
Q 031152 7 KLLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFK 80 (165)
Q Consensus 7 ~~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~~ 80 (165)
.=||+||||++.|| +.||+++.|++ |+|+.||||+|+|+|||||+..+++.++.++|+..+++|+..
T Consensus 36 ~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~-------Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~~~de~~~ 108 (184)
T 3rdd_A 36 LGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFI 108 (184)
T ss_dssp EEEEEEEECTTTSHHHHHHHHHHHHTTTSCS-------STTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCCC
T ss_pred eeEEEEEEeCCCCcHHHHHHHHHhccCcCcc-------cCCCEEEEccCCcEEEeCCCCCCCCCCCcccCCCcccCcccc
Confidence 34899999999999 77998777653 999999999999999999988889999999999999999999
Q ss_pred ccCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCcceEEeeeeeec
Q 031152 81 IKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEIP 157 (165)
Q Consensus 81 ~~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~~~P~~~i~I~~cg~l~ 157 (165)
++|+++|+||||+.++++++|||||++.++|+||++|+|||+|++|||||++|++.. +++++|.++|+|.+||+|+
T Consensus 109 l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~-~~~g~P~~~v~I~~cG~l~ 184 (184)
T 3rdd_A 109 LKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFG-SRNGKTSKKITIADCGQLE 184 (184)
T ss_dssp SCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTC-CTTSCCSSCEEEEEEEECC
T ss_pred cccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcC-CCCCCCcCCeEEEeCeEEC
Confidence 999999999999999999999999999999999999999999999999999999766 4689999999999999984
No 19
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=3.9e-46 Score=286.61 Aligned_cols=147 Identities=29% Similarity=0.335 Sum_probs=126.9
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEee-----eCCCCCCCCCCccc------
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGG-----DIVRGDGKGSDSIY------ 70 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~G-----d~~~~~~~~~~s~~------ 70 (165)
=+|+|+||++.|| +.||. .| ||+|+.||||+|+|+|||| |++ +++.++.++|
T Consensus 16 G~i~ieL~~~~aP~t~~NF~~L~~--~g--------~Ydg~~FhRvi~~f~iQgG~~~~~Dp~-~~g~gg~si~~~~~~~ 84 (201)
T 3bo7_A 16 GSLNIELHADMAPRACDSFLRLCA--VK--------YFDDTIFHRCIRNFMIQGGRAELRQPS-KKKEVQQSPRSISGFP 84 (201)
T ss_dssp EEEEEEECTTTCHHHHHHHHHHHH--TT--------TTTTCBEEEEETTTEEEECCGGGCCC--------CCSSCCCSST
T ss_pred CCEEEEEcCCCCcHHHHHHHHHHh--cC--------ccCCCEEEEeeCCCEEEcCcccccCCC-CCCCCCcccccccccc
Confidence 3899999999999 66773 33 6999999999999999999 986 7788889999
Q ss_pred -CCCCCCCC-ccccCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCcce
Q 031152 71 -GGTFPDEN-FKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKV 148 (165)
Q Consensus 71 -g~~~~~e~-~~~~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~~~P~~~i 148 (165)
+..+++|. ..++|+.+|+||||+.+|++++|||||++.++|+||++|+|||+|++||+||++|++.+++.+++|..+|
T Consensus 85 ~g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i 164 (201)
T 3bo7_A 85 GGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWEKLETDKKDKPLKPP 164 (201)
T ss_dssp TCCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTCCBCTTSCBSSCC
T ss_pred CCCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHHhCCcCCCCCcCCCe
Confidence 88999995 6889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeeeeecCCCCCCCC
Q 031152 149 TIADSGEIPKNKWDEER 165 (165)
Q Consensus 149 ~I~~cg~l~~~~~~~e~ 165 (165)
+|.+|+++.+|+.|.++
T Consensus 165 ~I~~~~v~~dPf~d~~~ 181 (201)
T 3bo7_A 165 KVEEIIVFKNPFEDARK 181 (201)
T ss_dssp BEEEEEEEECCC-----
T ss_pred EEEEEEEEcCCccCHHH
Confidence 99999999999988764
No 20
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=2.5e-46 Score=286.20 Aligned_cols=146 Identities=34% Similarity=0.534 Sum_probs=134.8
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCC-cc
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDEN-FK 80 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~-~~ 80 (165)
=||+|+||++.|| +.|| +.| ||+|+.||||+|+|+|||||+. +++.++.++||..+++|. ..
T Consensus 29 G~I~ieL~~~~aP~tv~NF~~L~--~~g--------~Ydg~~FhRVi~~f~iQgGd~~-~~g~Gg~si~g~~f~dE~~~~ 97 (197)
T 1zkc_A 29 GDLNLELHCDLTPKTCENFIRLC--KKH--------YYDGTIFHRSIRNFVIQGGDPT-GTGTGGESYWGKPFKDEFRPN 97 (197)
T ss_dssp EEEEEEECTTTSHHHHHHHHHHH--HTT--------TTTTEEEEEEETTTEEEECCTT-SSSSCCCBTTBSCBCCCCCTT
T ss_pred ccEEEEEcCCCCcHHHHHHHHHH--hcC--------CCCCCEEEEEeCCCEEEcCCCC-CCCCCCCccCCCccccccCcC
Confidence 3899999999999 6677 333 6999999999999999999996 778889999999999994 68
Q ss_pred ccCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCC-CCCCcceEEeeeeeecCC
Q 031152 81 IKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYS-GKPRKKVTIADSGEIPKN 159 (165)
Q Consensus 81 ~~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~-~~P~~~i~I~~cg~l~~~ 159 (165)
++|+.+|+||||+.++++++|||||++.++|+||++|+|||+|++|||||++|++.+++.+ ++|..+|+|.+|+++.++
T Consensus 98 l~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~i~I~~~~v~~dP 177 (197)
T 1zkc_A 98 LSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVFVDP 177 (197)
T ss_dssp CCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTCCBSSCCEEEEEEEEECT
T ss_pred cCCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCcCCCeEEEEEEEEcCC
Confidence 8999999999999999999999999999999999999999999999999999999999887 999999999999999998
Q ss_pred CCCCC
Q 031152 160 KWDEE 164 (165)
Q Consensus 160 ~~~~e 164 (165)
+.|.+
T Consensus 178 f~d~~ 182 (197)
T 1zkc_A 178 YEEAD 182 (197)
T ss_dssp THHHH
T ss_pred cccHH
Confidence 87653
No 21
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=1.1e-46 Score=283.27 Aligned_cols=142 Identities=42% Similarity=0.750 Sum_probs=104.2
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCccc
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKI 81 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~~~ 81 (165)
=||+||||++.|| +.||++++|++ |+|+.||||+|+|+|||||+..++++++.++|+..+++|+..+
T Consensus 22 G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~-------Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~~~ 94 (172)
T 2c3b_A 22 GRIVFNLFDKDVPKTAKNFRELCKRPAGEG-------YRESTFHRIIPNFMIQGGDFTRGNGTGGRSIYGDKFADENFSR 94 (172)
T ss_dssp EEEEEEECTTTSHHHHHHHHHHHHSCTTTS-------STTCBCCEEETTTEEEECC----------------------CH
T ss_pred ccEEEEEcCCCCcHHHHHHHHHhccCCCcc-------cCCCEEEEEeCCCEEEeCCcCCCCCCCCcccCCCcccCccccc
Confidence 5999999999999 78998777643 9999999999999999999667888999999999999998899
Q ss_pred cCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEc--CHHHHHHHhcCCCCCCC-CCCcceEEeeeeee
Q 031152 82 KHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQ--GMDTVYAIEGGAGTYSG-KPRKKVTIADSGEI 156 (165)
Q Consensus 82 ~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~--G~evl~~I~~~~~~~~~-~P~~~i~I~~cg~l 156 (165)
+|+.+|+||||+.+|++++|||||++.++|+||++|+|||||++ |||||++|++.+++..+ +|.++|+|.+||+|
T Consensus 95 ~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~~~~~~P~~~v~I~~cG~l 172 (172)
T 2c3b_A 95 KHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSSSGSVRSNTRPKIVNCGEL 172 (172)
T ss_dssp HHHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCTTSCCCSSSCCEEEEEEEC
T ss_pred ccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCCCCCccCCCCeEEEeCeeC
Confidence 99999999999999999999999999999999999999999999 99999999988887655 99999999999986
No 22
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=2.1e-45 Score=280.73 Aligned_cols=143 Identities=44% Similarity=0.757 Sum_probs=133.9
Q ss_pred eEEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCcc
Q 031152 7 KLLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFK 80 (165)
Q Consensus 7 ~~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~~ 80 (165)
.=||+||||++.|| +.||++++|++ |+|+.||||+|+|+|||||+..+++.++.++|+..+++|+..
T Consensus 41 ~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~-------Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~~~ 113 (193)
T 3k2c_A 41 LGRIVMKLEDDIVPKTAKNFRTLCERPKGEG-------YKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYGEKFPDENFE 113 (193)
T ss_dssp EEEEEEEECTTTSHHHHHHHHHHHHSCTTSS-------STTCBEEEEETTTEEEECCTTTSSSSCCCCTTSSCBCCCCCC
T ss_pred eeEEEEEEcCCCChHHHHHHHHHhccccCCc-------ccCCEEEEEeCCCEEEeCCCCCCCCcCCcccCCCcccccccc
Confidence 34899999999999 77998777643 999999999999999999988889999999999999999999
Q ss_pred ccCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCC--cceEEeeeeeec
Q 031152 81 IKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPR--KKVTIADSGEIP 157 (165)
Q Consensus 81 ~~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~~~P~--~~i~I~~cg~l~ 157 (165)
++|+.+|+||||+.++++++|||||++.++|+||++|+|||||++|||||++|++..++ +++|. .+|+|.+||+|.
T Consensus 114 l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~-~g~P~~~~~v~I~~cG~l~ 191 (193)
T 3k2c_A 114 LKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSE-SGQVKKGYRIEIRDCGVLG 191 (193)
T ss_dssp SCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCCCCTTCCEEEEEEEECC
T ss_pred cccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCC-CCcCccCccEEEEEceEeC
Confidence 99999999999999999999999999999999999999999999999999999977776 68999 999999999996
No 23
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=2.2e-45 Score=273.37 Aligned_cols=138 Identities=39% Similarity=0.565 Sum_probs=128.7
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCc-c
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENF-K 80 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~-~ 80 (165)
=||+||||++.|| +.|| +. +||+|+.||||+|+|+|||||+. +++.++.++|+..+++|+. .
T Consensus 15 G~i~ieL~~~~aP~t~~NF~~L~--~~--------g~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~~~ 83 (160)
T 2fu0_A 15 GDIHISLFYKECKKTVQNFSVHS--IN--------GYYNNCIFHRVIKHFMVQTGDPS-GDGTGGESIWGNEFEDEFFDH 83 (160)
T ss_dssp EEEEEEECTTTCHHHHHHHHHHH--HT--------TTTTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCCBTT
T ss_pred ccEEEEEeCCCChHHHHHHHHHh--cc--------CccCCCEEEEEECCCEEEeCCcC-CCCCCCCcccCCCccccccCC
Confidence 3899999999999 6677 23 36999999999999999999995 7788899999999999987 6
Q ss_pred ccCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCcceEEeeeeee
Q 031152 81 IKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEI 156 (165)
Q Consensus 81 ~~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~~~P~~~i~I~~cg~l 156 (165)
++|+++|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|++.+++.+++|.++|+|.+|.++
T Consensus 84 l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~~v~ 159 (160)
T 2fu0_A 84 LNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPLEDIKILNIKIN 159 (160)
T ss_dssp BCSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCCBEEEEEEC
T ss_pred cccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCcCCCeEEEEEEEe
Confidence 8999999999999999999999999999999999999999999999999999999999989999999999999876
No 24
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=2.8e-45 Score=280.32 Aligned_cols=141 Identities=37% Similarity=0.527 Sum_probs=128.2
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCC-cc
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDEN-FK 80 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~-~~ 80 (165)
=||+|+||++.|| +.||. . +||+|+.||||+|+|+|||||+. +++.++.++||..+++|. ..
T Consensus 48 G~I~ieL~~~~aP~tv~NF~~L~~--~--------g~Y~g~~FhRVi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~~~ 116 (196)
T 2b71_A 48 GDFEVELYWYHSPKTCLNFYTLCE--M--------GFYDNTIFHRVIPNFVIQGGDPT-GTGKGGKSIYGEYFEDEINKE 116 (196)
T ss_dssp EEEEEEECTTTSHHHHHHHHHHHH--T--------TTTTTEEEEEEETTTEEEEEETT-SSSSCCCBTTBSCBCCCCCTT
T ss_pred CCEEEEEeCCCCcHHHHHHHHHhh--c--------CCcCCCEEEEEeCCcEEEcCCCC-CCCCCCCccCCCcccccccCC
Confidence 4899999999999 66773 3 36999999999999999999996 778889999999999995 57
Q ss_pred ccCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCcceEEeeeeeecCC
Q 031152 81 IKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEIPKN 159 (165)
Q Consensus 81 ~~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~~~P~~~i~I~~cg~l~~~ 159 (165)
++|+.+|+||||+.+|++++|||||++.++|+||++|+|||||++||+||++|++.+++.+++|.++|+|.+|.++.+|
T Consensus 117 l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~I~~~~i~~dP 195 (196)
T 2b71_A 117 LKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNKPIFDLKILRTSTAVNA 195 (196)
T ss_dssp CCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCCBSSCCEEEEEEC----
T ss_pred cCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCCCCCCeEEEEEEEecCC
Confidence 8998999999999999999999999999999999999999999999999999999999999999999999999999765
No 25
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=3.5e-45 Score=278.90 Aligned_cols=145 Identities=32% Similarity=0.473 Sum_probs=131.3
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCC--CC---CCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCC
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGA--SG---KPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPD 76 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~--~~---~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~ 76 (165)
=||+||||++.|| +.||+|++++.. .+ +.+||+|+.||||+|+|+|||||+. +++.++ +|..+++
T Consensus 33 G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~~-g~G~gg---~g~~f~d 108 (191)
T 1w74_A 33 GDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPT-GTGRGG---PGYKFAD 108 (191)
T ss_dssp EEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCTT-SSSSCC---SSCCBCC
T ss_pred eeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCCC-CCCCCC---CCCcccc
Confidence 4899999999999 889999988632 11 3579999999999999999999984 566665 5888999
Q ss_pred CC-ccccCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEc--CHHHHHHHhcCCCCCCCCCCcceEEeee
Q 031152 77 EN-FKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQ--GMDTVYAIEGGAGTYSGKPRKKVTIADS 153 (165)
Q Consensus 77 e~-~~~~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~--G~evl~~I~~~~~~~~~~P~~~i~I~~c 153 (165)
|. ..++|+.+|+||||+.+|++++||||||+.++|+||++|+|||||++ ||+||++|++.+++.+++|.++|+|.+|
T Consensus 109 E~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~ 188 (191)
T 1w74_A 109 EFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESI 188 (191)
T ss_dssp CCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTSCBCTTSCBSSCCEEEEE
T ss_pred ccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcCCcCCCCCcCCCeEEEEE
Confidence 94 68999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred eee
Q 031152 154 GEI 156 (165)
Q Consensus 154 g~l 156 (165)
+++
T Consensus 189 ~i~ 191 (191)
T 1w74_A 189 TIS 191 (191)
T ss_dssp EEC
T ss_pred EEC
Confidence 984
No 26
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=3.2e-45 Score=273.93 Aligned_cols=138 Identities=38% Similarity=0.673 Sum_probs=128.7
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCc-c
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENF-K 80 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~-~ 80 (165)
=||+||||++.|| +.|| +.| ||+|+.||||+|+|+|||||+. +++.++.++|+..+++|+. .
T Consensus 21 G~i~ieL~~~~aP~t~~NF~~L~--~~g--------~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~~~ 89 (166)
T 2x7k_A 21 GIIVLELYWKHAPKTCKNFAELA--RRG--------YYNGTKFHRIIKDFMIQGGDPT-GTGRGGASIYGKQFEDELHPD 89 (166)
T ss_dssp EEEEEEECTTTCHHHHHHHHHHH--HHT--------TTTTEECCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCCCTT
T ss_pred CcEEEEEccCCCCHHHHHHHHHH--hcC--------CCCCCEEEEEECCCEEEcCCCC-CCCCCCCccCCCccccccccc
Confidence 3899999999999 6677 333 6999999999999999999996 7788899999999999984 8
Q ss_pred ccCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCcceEEeeeeee
Q 031152 81 IKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEI 156 (165)
Q Consensus 81 ~~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~~~P~~~i~I~~cg~l 156 (165)
++|..+|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|++.+++.+++|.++|+|.+|.++
T Consensus 90 l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~i~I~~~~i~ 165 (166)
T 2x7k_A 90 LKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKAYPS 165 (166)
T ss_dssp SCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTSCBSSCCEEEEEEEC
T ss_pred cCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEEEEEEe
Confidence 8998899999999999999999999999999999999999999999999999999999998999999999999986
No 27
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=1.6e-45 Score=288.62 Aligned_cols=157 Identities=22% Similarity=0.314 Sum_probs=132.4
Q ss_pred eEEEEEEEcCCccc------cceeeeccCCC------CC----CCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCccc
Q 031152 7 KLLKISGLYAQYIW------YFPIIGEKGTG------AS----GKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIY 70 (165)
Q Consensus 7 ~~rivieL~~d~aP------~~l~~g~~g~~------~~----~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~ 70 (165)
.=||+||||.+.|| +.||++++.+. .. ++...|+|+.||||+|+|||||||+..++++++.++|
T Consensus 28 ~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~FmiQgGd~~~g~G~Gg~siy 107 (234)
T 2ose_A 28 IGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYIVSGDIYNSNGSSAGTVY 107 (234)
T ss_dssp EEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEEEECCCC----CCCCCTT
T ss_pred cceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEEEcCCccCCCCCCCcccc
Confidence 45899999999999 78998762211 00 1222399999999999999999998778899999999
Q ss_pred CCC-----CCCCCccccCCcceEEEEec----CCCCCCCceEEEEcCC------CCCCCCCCcEEEEEEcCHHHHHHHhc
Q 031152 71 GGT-----FPDENFKIKHSHAGVVSMVN----SGPDSNGSQFFITTVK------ASWLDGEHVVFGKVIQGMDTVYAIEG 135 (165)
Q Consensus 71 g~~-----~~~e~~~~~h~~~G~lsm~~----~~~~~~~sqF~Itl~~------~~~ld~~~~vFGrVi~G~evl~~I~~ 135 (165)
|.. |+ ++.++|+.+|+||||+ .++++++||||||+.+ +|+||++|+|||+|++|||||++|++
T Consensus 108 g~~~~p~~f~--~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~tVFG~Vv~GmdVv~~I~~ 185 (234)
T 2ose_A 108 CDEPIPPVFG--DYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQVVIGQVYGGLDVLDKINS 185 (234)
T ss_dssp TTCCBCCCCC--SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSEEEEEEEECHHHHHHHHH
T ss_pred CCccCccccc--CcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCeeEEEEEeCCHHHHHHHHh
Confidence 987 65 4588998999999999 8999999999999999 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceEEeeeeeecCCCCCCCC
Q 031152 136 GAGTYSGKPRKKVTIADSGEIPKNKWDEER 165 (165)
Q Consensus 136 ~~~~~~~~P~~~i~I~~cg~l~~~~~~~e~ 165 (165)
..++.+++|..+|+|.+|+++.+++.+.+|
T Consensus 186 ~~t~~~~~P~~~V~I~~~~~l~~p~~~~~k 215 (234)
T 2ose_A 186 MIKPYAGRKYPTFSIGKCGAYLDSSQAQRK 215 (234)
T ss_dssp HTCCCTTCCCCCEEEEEEEECCCHHHHCC-
T ss_pred CCcCCCCCccCCEEEEEEEEecCCcccccc
Confidence 999999999999999999999987766543
No 28
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=1.5e-44 Score=277.45 Aligned_cols=143 Identities=37% Similarity=0.638 Sum_probs=132.2
Q ss_pred EEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCc-cc
Q 031152 9 LKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENF-KI 81 (165)
Q Consensus 9 rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~-~~ 81 (165)
||+||||++.|| +.||+ .| ||+++.||||+|+|+|||||+. +++.++.++|+..+++|+. .+
T Consensus 22 ~I~ieL~~d~aP~tv~NF~~L~~--~g--------~Ydg~~FhRVi~~F~iQgGd~~-~~g~gg~si~g~~f~dE~~~~l 90 (203)
T 2k7n_A 22 IIVLELYWKHAPKTCKNFAELAR--RG--------YYNGTKFHRIIKDFMIQGGDPT-GTGRGGASIYGKQFEDELHPDL 90 (203)
T ss_dssp EEEEEECTTTCTTHHHHHHHHHH--HT--------CGGGCEEEEEETTTEEEEECSS-SSSSCCCTTSCSCBCCCCCCSS
T ss_pred cEEEEEccCCCcHHHHHHHHHHh--cC--------ccCCCEEEEEeCCcEEEcCCCC-CCCCCCCccCCCcccccccccc
Confidence 899999999999 66773 33 6999999999999999999996 7788889999999999974 88
Q ss_pred cCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCcceEEeeeeeecCCCC
Q 031152 82 KHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEIPKNKW 161 (165)
Q Consensus 82 ~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~~~P~~~i~I~~cg~l~~~~~ 161 (165)
+|..+|+||||+.++++++|||||++.++|+||++|+|||||++|||||++|++.+++.+++|.++|+|.+|+++..++-
T Consensus 91 ~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~~P~~~V~I~~~~v~~~~~s 170 (203)
T 2k7n_A 91 KFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKAYPSGGGGS 170 (203)
T ss_dssp CCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETTEECCCCBEEEEEECCCCCC
T ss_pred cCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEEEEEEEecCCC
Confidence 99889999999999999999999999999999999999999999999999999999988899999999999999987654
Q ss_pred C
Q 031152 162 D 162 (165)
Q Consensus 162 ~ 162 (165)
+
T Consensus 171 ~ 171 (203)
T 2k7n_A 171 G 171 (203)
T ss_dssp C
T ss_pred C
Confidence 3
No 29
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=2.9e-44 Score=270.93 Aligned_cols=137 Identities=38% Similarity=0.621 Sum_probs=127.2
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCc-c
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENF-K 80 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~-~ 80 (165)
=||+||||++.|| +.||. . +||+|+.||||+|+|+|||||+. +++.++.++||..+++|+. .
T Consensus 31 G~i~ieL~~~~aP~t~~NF~~L~~--~--------g~Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~~~ 99 (176)
T 2a2n_A 31 GDIHTKLFPVECPKTVENFCVHSR--N--------GYYNGHTFHRIIKGFMIQTGDPT-GTGMGGESIWGGEFEDEFHST 99 (176)
T ss_dssp EEEEEEECTTTCHHHHHHHHHHHH--T--------TTTTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCCCTT
T ss_pred ccEEEEEeCCCChHHHHHHHHHhh--c--------CccCCCEEEEEECCcEEEccCCC-CCCCCCCcccCCccccccccc
Confidence 3899999999999 66773 3 36999999999999999999995 7788899999999999987 6
Q ss_pred ccCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCC-CCCCCCcceEEeeeee
Q 031152 81 IKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGT-YSGKPRKKVTIADSGE 155 (165)
Q Consensus 81 ~~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~-~~~~P~~~i~I~~cg~ 155 (165)
++|+++|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|++.+++ .+++|.++|+|.+|.+
T Consensus 100 l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~v~I~~v~v 175 (176)
T 2a2n_A 100 LRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV 175 (176)
T ss_dssp CCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTCCBSSCCBEEEEEE
T ss_pred cccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCCccCCCeEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999888 6899999999999975
No 30
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=4.4e-44 Score=296.57 Aligned_cols=151 Identities=49% Similarity=0.807 Sum_probs=141.6
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCCC-CCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCcc
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGAS-GKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFK 80 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~~-~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~~ 80 (165)
=||+|+||++.|| +.||++++|++.. |++.||+|+.||||+|+|+|||||++.++|+++.++||..+++|+..
T Consensus 30 G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g~~~~~~~~~~~e~~~ 109 (370)
T 1ihg_A 30 GRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFH 109 (370)
T ss_dssp EEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCCC
T ss_pred ccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCCCCCCCCCCcCCCcCC
Confidence 4899999999999 8899999887543 56678999999999999999999999889999999999999999999
Q ss_pred ccCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCcceEEeeeeeecCC
Q 031152 81 IKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEIPKN 159 (165)
Q Consensus 81 ~~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl~~I~~~~~~~~~~P~~~i~I~~cg~l~~~ 159 (165)
++|+.+|+||||+.+|++++||||||+.++|+||++|+|||+|++||+||++|++..++. ++|..+|+|.+|+++..+
T Consensus 110 ~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~-~~P~~~v~I~~~g~l~~~ 187 (370)
T 1ihg_A 110 YKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKG-EKPAKLCVIAECGELKEG 187 (370)
T ss_dssp BCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEET-TEESSCEEEEEEEEECTT
T ss_pred cCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCC-CccceeEEEEEEEEeccC
Confidence 999999999999999999999999999999999999999999999999999999887776 999999999999999754
No 31
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=269.61 Aligned_cols=143 Identities=31% Similarity=0.478 Sum_probs=130.3
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCc-c
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENF-K 80 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~-~ 80 (165)
=||+||||++.|| +.||+ . +||+|+.||||+|+|+|||||+. +++.++.++||..+++|.. .
T Consensus 34 G~I~ieL~~~~aP~tv~NF~~L~~--~--------g~Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~~~~ 102 (185)
T 2hq6_A 34 GDIDIELWSKEAPKACRNFIQLCL--E--------AYYDNTIFHRVVPGFIVQGGDPT-GTGSGGESIYGAPFKDEFHSR 102 (185)
T ss_dssp EEEEEEEBTTTCHHHHHHHHHHHH--T--------TTTTTEECCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCCBTT
T ss_pred ccEEEEEeCCCCcHHHHHHHHHhh--c--------CccCCCEEEEEECCCEEEcCCCC-CCCCCCCcccCCccccccccC
Confidence 4899999999999 66773 3 36999999999999999999996 7788889999999999986 6
Q ss_pred ccCCcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHHH--HHHhcCCCCCCCCCCcceEEeeeeeecC
Q 031152 81 IKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTV--YAIEGGAGTYSGKPRKKVTIADSGEIPK 158 (165)
Q Consensus 81 ~~h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~evl--~~I~~~~~~~~~~P~~~i~I~~cg~l~~ 158 (165)
++|+.+|+||||+.++++++|||||++.++|+||++|+|||||+ ||+++ ++|++..++.+++|.++|+|.+|+++.+
T Consensus 103 l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~~~~~P~~~v~I~~~~v~~~ 181 (185)
T 2hq6_A 103 LRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDERPHNPHKIKSCEVLFN 181 (185)
T ss_dssp BCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBCTTSCBSSCCEEEEEEEEEC
T ss_pred cccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcCCCCCCCCCeEEEEEEEeCC
Confidence 88999999999999999999999999999999999999999999 88774 6899888999999999999999999998
Q ss_pred CCCC
Q 031152 159 NKWD 162 (165)
Q Consensus 159 ~~~~ 162 (165)
|+.|
T Consensus 182 Pf~d 185 (185)
T 2hq6_A 182 PFDD 185 (185)
T ss_dssp TTC-
T ss_pred CCCC
Confidence 8865
No 32
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.8e-42 Score=270.95 Aligned_cols=144 Identities=28% Similarity=0.380 Sum_probs=130.0
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCccc--CCCCCCCCc
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIY--GGTFPDENF 79 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~--g~~~~~e~~ 79 (165)
=+|+|+||++.|| +.||+ .| ||+|+.||||+|+|+|||||++ +++.++.++| |..+++|..
T Consensus 31 G~I~ieL~~d~aP~tv~NF~~L~~--~g--------~Ydgt~FhRVi~~FmiQgGdp~-~~G~Gg~si~~~g~~f~dE~~ 99 (232)
T 3bkp_A 31 GDLDVELWARECPLACRNFVQLCL--EG--------YYVNTIFHRVVKDFIVQGGDPT-GTGRGGADTTFDGKPFDVETH 99 (232)
T ss_dssp EEEEEEEBTTTCHHHHHHHHHHHH--HT--------TTTTCBEEEEETTTEEEECCTT-SSSSCCCCCTTTTCCBCCCCC
T ss_pred CcEEEEEcCCCCcHHHHHHHHHhh--cC--------ccCCCEEEEEeCCCEEEcCCCC-CCCCCCCccccCCCccCCccc
Confidence 3799999999999 66773 33 6999999999999999999996 7788999999 899999976
Q ss_pred -cccCCcceEEEEecCCC--------------CCCCceEEEEcCCCCCCCCCCcEEEEEEcCHHH--HHHHhcCCCCCCC
Q 031152 80 -KIKHSHAGVVSMVNSGP--------------DSNGSQFFITTVKASWLDGEHVVFGKVIQGMDT--VYAIEGGAGTYSG 142 (165)
Q Consensus 80 -~~~h~~~G~lsm~~~~~--------------~~~~sqF~Itl~~~~~ld~~~~vFGrVi~G~ev--l~~I~~~~~~~~~ 142 (165)
.++|+.+|+||||+.++ ++++||||||+.++|+||++|+|||+|+ ||++ |++|++++++.++
T Consensus 100 ~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~v~~v~kI~~~~t~~~~ 178 (232)
T 3bkp_A 100 PRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GHTLYNLMKFNDLEVGKED 178 (232)
T ss_dssp TTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHHTTSCBCGGG
T ss_pred cCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eCchHHHHHHHcCCcCCCC
Confidence 78899999999999987 6999999999999999999999999999 6655 8999999999999
Q ss_pred CCCcceEEeeeeeecCCCCCC
Q 031152 143 KPRKKVTIADSGEIPKNKWDE 163 (165)
Q Consensus 143 ~P~~~i~I~~cg~l~~~~~~~ 163 (165)
+|..+|+|.+|+++.+++.|.
T Consensus 179 ~P~~~i~I~~~~vl~dPf~d~ 199 (232)
T 3bkp_A 179 RPMTPPFIKSVDVLWNPFEDL 199 (232)
T ss_dssp CBSSCCBEEEEEEEECCCTTC
T ss_pred CcCCCeEEEEEEEEcCChhhh
Confidence 999999999999999998775
No 33
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=1.3e-42 Score=259.53 Aligned_cols=136 Identities=26% Similarity=0.407 Sum_probs=119.8
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCcc-
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFK- 80 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~~- 80 (165)
=||+||||++.|| +.|| +.| ||+|+.||||+|+|+|||||++.+. +.++++..+++|+..
T Consensus 9 G~i~ieL~~~~aP~t~~NF~~L~--~~g--------~Y~g~~FhRvi~~f~iQgGd~~~~~---g~~~~g~~~~dE~~~~ 75 (164)
T 1lop_A 9 GDIVIKTFDDKAPETVKNFLDYC--REG--------FYNNTIFHRVINGFMIQGGGFEPGM---KQKATKEPIKNEANNG 75 (164)
T ss_dssp EEEEEEECTTTSHHHHHHHHHHH--HTT--------TTTTEECCEEETTTEEEESSEETTT---EECCCCCCBCCCCCSS
T ss_pred CCEEEEEeCCCCcHHHHHHHHHH--hcC--------CCCCCEEEEEeCCceEecCCcccCC---CcCCCCCccccccccc
Confidence 3899999999999 6666 333 6999999999999999999986433 456778999999864
Q ss_pred ccCCcceEEEEecC-CCCCCCceEEEEcCCCCCCCCC--------CcEEEEEEcCHHHHHHHhcCCCCC----CCCCCcc
Q 031152 81 IKHSHAGVVSMVNS-GPDSNGSQFFITTVKASWLDGE--------HVVFGKVIQGMDTVYAIEGGAGTY----SGKPRKK 147 (165)
Q Consensus 81 ~~h~~~G~lsm~~~-~~~~~~sqF~Itl~~~~~ld~~--------~~vFGrVi~G~evl~~I~~~~~~~----~~~P~~~ 147 (165)
++| .+|+||||+. +|++++|||||++.++++||++ |+|||+|++|||||++|++.+++. +++|.++
T Consensus 76 l~~-~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~ 154 (164)
T 1lop_A 76 LKN-TRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVPKED 154 (164)
T ss_dssp CCC-CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSC
T ss_pred ccc-CccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCCcCCC
Confidence 666 5999999975 7999999999999999999998 999999999999999999888865 5899999
Q ss_pred eEEeeeeeec
Q 031152 148 VTIADSGEIP 157 (165)
Q Consensus 148 i~I~~cg~l~ 157 (165)
|+|.+|++++
T Consensus 155 v~I~~~~v~~ 164 (164)
T 1lop_A 155 VIIESVTVSE 164 (164)
T ss_dssp CEEEEEEECC
T ss_pred eEEEEEEEeC
Confidence 9999999874
No 34
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=4.7e-42 Score=256.94 Aligned_cols=137 Identities=27% Similarity=0.343 Sum_probs=119.0
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCccc
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKI 81 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~~~ 81 (165)
=||+||||++.|| +.|| +. +||+|+.||||+|+|+|||||++...+ ...++.++++|....
T Consensus 14 G~i~ieL~~~~aP~t~~NF~~L~--~~--------g~Y~g~~FhRvi~~f~iQgGd~~~~~~---~~~~g~~~~dE~~~~ 80 (166)
T 1v9t_A 14 GNIELELDKQKAPVSVQNFVDYV--NS--------GFYNNTTFHRVIPGFMIQGGGFTEQMQ---QKKPNPPIKNEADNG 80 (166)
T ss_dssp EEEEEEECTTTCHHHHHHHHHHH--HT--------TTTTTCBEEEEETTTEEEESSBCTTCC---BCCCCCCBCCCGGGS
T ss_pred ccEEEEEcCCCCcHHHHHHHHHh--cc--------CCCCCCEEEEEECCcEEEcCCcCcCCC---CCCCCCccccccccc
Confidence 3899999999999 6677 33 369999999999999999999974432 234577899998754
Q ss_pred cCCcceEEEEecC-CCCCCCceEEEEcCCCCCCCCC-----CcEEEEEEcCHHHHHHHhcCCCCC----CCCCCcceEEe
Q 031152 82 KHSHAGVVSMVNS-GPDSNGSQFFITTVKASWLDGE-----HVVFGKVIQGMDTVYAIEGGAGTY----SGKPRKKVTIA 151 (165)
Q Consensus 82 ~h~~~G~lsm~~~-~~~~~~sqF~Itl~~~~~ld~~-----~~vFGrVi~G~evl~~I~~~~~~~----~~~P~~~i~I~ 151 (165)
.|+.+|+||||+. +|++++|||||++.++++||++ |+|||+|++|||||++|++.+++. +++|.++|+|.
T Consensus 81 l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~~~~P~~~v~I~ 160 (166)
T 1v9t_A 81 LRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPVVIL 160 (166)
T ss_dssp CCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSCCBEE
T ss_pred ccCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCCCCCccCCCcCCCeEEE
Confidence 5556999999997 6999999999999999999998 999999999999999999888876 47999999999
Q ss_pred eeeeec
Q 031152 152 DSGEIP 157 (165)
Q Consensus 152 ~cg~l~ 157 (165)
+|.+++
T Consensus 161 ~~~v~~ 166 (166)
T 1v9t_A 161 SATVLP 166 (166)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 999873
No 35
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=1.7e-41 Score=254.22 Aligned_cols=135 Identities=27% Similarity=0.405 Sum_probs=117.8
Q ss_pred EEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCCCCcccCCCCCCCCc-c
Q 031152 8 LLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENF-K 80 (165)
Q Consensus 8 ~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~~~s~~g~~~~~e~~-~ 80 (165)
=||+||||++.|| +.||+ .| ||+|+.||||+|+|+|||||++...+ .+.++..+++|.. .
T Consensus 13 G~i~ieL~~~~aP~t~~NF~~L~~--~g--------~Y~g~~FhRvi~~f~iQgGd~~~~~~---~~~~~~~~~~E~~~~ 79 (167)
T 3s6m_A 13 GVIKLELDEAKAPKTVENFLNYVK--KG--------HYDGTIFHRVINGFMIQGGGFEPGLK---QKPTDAPIANEANNG 79 (167)
T ss_dssp EEEEEEECTTTCHHHHHHHHHHHH--HT--------TTTTEECCEEETTTEEEESSEETTTE---ECCCCCCBCCCGGGC
T ss_pred ceEEEEEeCCCCcHHHHHHHHHhh--hc--------ccCCCEeEEecCCcEEEeccccCCCC---CCCCCCccCCccccc
Confidence 3899999999999 56663 33 69999999999999999999864432 2445778899965 4
Q ss_pred ccCCcceEEEEec-CCCCCCCceEEEEcCCCCCCCCC--------CcEEEEEEcCHHHHHHHhcCCCCC----CCCCCcc
Q 031152 81 IKHSHAGVVSMVN-SGPDSNGSQFFITTVKASWLDGE--------HVVFGKVIQGMDTVYAIEGGAGTY----SGKPRKK 147 (165)
Q Consensus 81 ~~h~~~G~lsm~~-~~~~~~~sqF~Itl~~~~~ld~~--------~~vFGrVi~G~evl~~I~~~~~~~----~~~P~~~ 147 (165)
+.| .+|+||||+ .+|++++|||||++.++++||++ |+|||+|++|||||++|++.+++. +++|.++
T Consensus 80 l~~-~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~ 158 (167)
T 3s6m_A 80 LKN-DTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVKTGSKGFHQDVPNDD 158 (167)
T ss_dssp CCC-CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSCBBC---CBTCBSSC
T ss_pred ccC-CccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcCCcCCCcccCCCcCCC
Confidence 555 799999999 57999999999999999999998 999999999999999999998887 6899999
Q ss_pred eEEeeeeee
Q 031152 148 VTIADSGEI 156 (165)
Q Consensus 148 i~I~~cg~l 156 (165)
|+|.+|.+|
T Consensus 159 v~I~~~~il 167 (167)
T 3s6m_A 159 VVIEKAVVV 167 (167)
T ss_dssp CEEEEEEEC
T ss_pred eEEEEEEEC
Confidence 999999886
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=1.2e-34 Score=238.88 Aligned_cols=128 Identities=25% Similarity=0.352 Sum_probs=107.6
Q ss_pred eEEEEEEEcCCccc------cceeeeccCCCCCCCCcccCCCeEEEEeCCcEEEeeeCCCCCCCC---------------
Q 031152 7 KLLKISGLYAQYIW------YFPIIGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKG--------------- 65 (165)
Q Consensus 7 ~~rivieL~~d~aP------~~l~~g~~g~~~~~~~~~Y~g~~f~rii~~~~iq~Gd~~~~~~~~--------------- 65 (165)
.=+|+|+||++.|| +.|| +. +||+|+.|||| |+|+|||||++ +++.|
T Consensus 187 ~G~I~IeL~~d~AP~Tv~NFl~L~--~~--------GfYdGt~FHRV-~gFmIQgGDp~-g~G~G~~~~~~g~~~~iP~E 254 (369)
T 3rfy_A 187 DCVFRIVLDGYNAPVTAGNFVDLV--ER--------HFYDGMEIQRS-DGFVVQTGDPE-GPAEGFIDPSTEKTRTVPLE 254 (369)
T ss_dssp EEEEEEEEETTTCHHHHHHHHHHH--HT--------TTTTTEECEEE-EEEEECCCCCC-CCCSCCCSCCCCCCCSSSSS
T ss_pred ceEEEEEEeCCCCcHHHHHHHHHh--hc--------CCcCCCeeeee-CCeeEecCCCC-CCCCCccCcccCcCcccCcc
Confidence 46899999999999 5677 23 36999999999 99999999996 44444
Q ss_pred ------CCcccCCCCCCCCc-----cccCCcceEEEEecC--CCCCCCceEEEEc-------CCCCCCCCCCcEEEEEEc
Q 031152 66 ------SDSIYGGTFPDENF-----KIKHSHAGVVSMVNS--GPDSNGSQFFITT-------VKASWLDGEHVVFGKVIQ 125 (165)
Q Consensus 66 ------~~s~~g~~~~~e~~-----~~~h~~~G~lsm~~~--~~~~~~sqF~Itl-------~~~~~ld~~~~vFGrVi~ 125 (165)
+.++|+..+++|.+ .++|+.+|+||||+. +||+++||||||+ .+.++||++|+|||+|++
T Consensus 255 ~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~~~~~~LDgkytVFG~Vve 334 (369)
T 3rfy_A 255 IMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPSNSNILDGRYAVFGYVTD 334 (369)
T ss_dssp SCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECSCCCSSSCSCEEEEEEEEE
T ss_pred ccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCCCCCcccCCCeeEEEEEec
Confidence 34667777777643 678889999999998 8999999999999 478999999999999999
Q ss_pred CHHHHHHHhcCCCCCCCCCCcceEEee
Q 031152 126 GMDTVYAIEGGAGTYSGKPRKKVTIAD 152 (165)
Q Consensus 126 G~evl~~I~~~~~~~~~~P~~~i~I~~ 152 (165)
|||||++|++ +..+.+|+|.+
T Consensus 335 GmdVVdkI~~------GD~I~sv~I~~ 355 (369)
T 3rfy_A 335 NEDFLADLKV------GDVIESIQVVS 355 (369)
T ss_dssp STTGGGGCCT------TCEEEEEEEEE
T ss_pred CHHHHHHHhC------CCceEEEEEec
Confidence 9999999994 45567777765
No 37
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=75.56 E-value=6 Score=29.18 Aligned_cols=32 Identities=22% Similarity=0.513 Sum_probs=22.1
Q ss_pred ceEEEEcCCCC--------CCCCCCcEEEEEEcCHHHHHHHh
Q 031152 101 SQFFITTVKAS--------WLDGEHVVFGKVIQGMDTVYAIE 134 (165)
Q Consensus 101 sqF~Itl~~~~--------~ld~~~~vFGrVi~G~evl~~I~ 134 (165)
..+.|-.+.+- ++-+ .+|++|++|.|.|.++-
T Consensus 127 ~dl~ifYG~~~~l~~~~~GwlpG--N~F~TIveGle~la~~c 166 (188)
T 3kop_A 127 VDLAVFYGRNNLLLNGDTGWVPG--NVFATIVEGLDEMAAAC 166 (188)
T ss_dssp EEEEEECSSSCCCEETTTEECCE--EEEEEEEESHHHHHHHH
T ss_pred eEEEEEecccccccccccceecC--cEEEEEecCHHHHHHHH
Confidence 45666555543 3333 56999999999997775
No 38
>2k9u_B Filamin-binding LIM protein 1; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=61.68 E-value=4.4 Score=19.89 Aligned_cols=20 Identities=25% Similarity=0.275 Sum_probs=13.3
Q ss_pred EecCCCCCCCceEEEEcCCC
Q 031152 91 MVNSGPDSNGSQFFITTVKA 110 (165)
Q Consensus 91 m~~~~~~~~~sqF~Itl~~~ 110 (165)
||........|..||||.+.
T Consensus 1 ma~kpeKR~aSSvFITLapp 20 (26)
T 2k9u_B 1 MASKPEKRVASSVFITLAPP 20 (26)
T ss_dssp CCCCSSSSCEEEEEEEECCS
T ss_pred CCCcchhheeeeEEEEecCc
Confidence 34444556678899999653
No 39
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=56.04 E-value=9.8 Score=26.59 Aligned_cols=45 Identities=22% Similarity=0.344 Sum_probs=33.0
Q ss_pred cceEEEEecCCCCCCCceEEEEcCCCCCCCC------CCcEEEEEEcCHHHHHHHh
Q 031152 85 HAGVVSMVNSGPDSNGSQFFITTVKASWLDG------EHVVFGKVIQGMDTVYAIE 134 (165)
Q Consensus 85 ~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~------~~~vFGrVi~G~evl~~I~ 134 (165)
..|.|+.-..+. -|.|-.++.|...+ .-.+||||.+|++.|..+.
T Consensus 74 ~~GDIaYw~pgg-----~LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v~ 124 (136)
T 1zx8_A 74 EIGDVGYWPPGK-----ALCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKIK 124 (136)
T ss_dssp CTTEEEEEGGGT-----EEEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGGGGCC
T ss_pred CCCcEEEeCCCC-----EEEEEeCCCccccCccccCcCcEEEEEEccCHHHHhhCC
Confidence 588888877654 37777788764442 3589999999988877665
No 40
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=36.60 E-value=29 Score=24.58 Aligned_cols=47 Identities=17% Similarity=0.224 Sum_probs=33.2
Q ss_pred CCcceEEEEecCCCCCCCceEEEEcCCCCCCCC------CCcEEEEEEcCHHHHHHHh
Q 031152 83 HSHAGVVSMVNSGPDSNGSQFFITTVKASWLDG------EHVVFGKVIQGMDTVYAIE 134 (165)
Q Consensus 83 h~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~------~~~vFGrVi~G~evl~~I~ 134 (165)
...+|.|+.-..+. .+.|-.++.|...+ .-.+||+|++|++.|.++.
T Consensus 91 ~~~~GDI~Yy~pg~-----~LaIFYg~~p~s~~e~~~as~~~~lG~I~~gle~L~~~~ 143 (153)
T 2nnz_A 91 VVELGDVAYWIPGK-----AICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGVA 143 (153)
T ss_dssp CCCTTEEEEETTTT-----EEEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCGGGCC
T ss_pred cCCCCeEEEeCCCC-----EEEEEECCccccccccccccccEEEEEEccCHHHHhhCC
Confidence 34589998877643 27777777754332 2578999999988887765
No 41
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=26.45 E-value=30 Score=28.41 Aligned_cols=50 Identities=12% Similarity=0.157 Sum_probs=40.2
Q ss_pred CcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEc-CHHHHHHHh
Q 031152 84 SHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQ-GMDTVYAIE 134 (165)
Q Consensus 84 ~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~-G~evl~~I~ 134 (165)
-.+|.|.+.|+.-..-..+.-|++.+.| -|++.-|+|+|.+ -+.+|+-|.
T Consensus 326 r~rGdItIdN~~ygRY~GElQI~l~dlp-~d~r~NVVG~I~~edl~LLd~I~ 376 (385)
T 1x7f_A 326 QERGQVVIGNNSFGKYKGELQIILKEMP-IDERKNIVGTIAEEELFLLDYVG 376 (385)
T ss_dssp BCTTEEEEECGGGGGGTTCEEEECSCBC-CCTTEEEEEEECGGGGGGGGGCC
T ss_pred ccCCcEEEeCCCccccccEeeEEcccCC-CCCCeeEEEEECHHHHHHHHhcC
Confidence 3599999999765555668999999988 5777889999996 677777776
No 42
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=23.72 E-value=30 Score=28.27 Aligned_cols=50 Identities=16% Similarity=0.157 Sum_probs=40.8
Q ss_pred CcceEEEEecCCCCCCCceEEEEcCCCCCCCCCCcEEEEEEc-CHHHHHHHh
Q 031152 84 SHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQ-GMDTVYAIE 134 (165)
Q Consensus 84 ~~~G~lsm~~~~~~~~~sqF~Itl~~~~~ld~~~~vFGrVi~-G~evl~~I~ 134 (165)
-.+|.|.+.|+.-..-..+.-|++.+.| -|++.-|+|+|.+ -+.+|+-|.
T Consensus 300 r~rGdItIdN~~ygrY~GElQI~l~dlp-~d~r~NVVG~I~~edl~LLd~I~ 350 (372)
T 2p0o_A 300 RPVGTVTIDNEKYGRYMGEIQVTLVDLP-KDEKVNTITRIIDKDQTILPLIK 350 (372)
T ss_dssp BCTTEEEEECGGGGGGTTCEEEESSCBC-CCTTEEEEEEBCGGGGGGGGGCC
T ss_pred ccCCeEEEeCCCccccccEeeEEcccCC-CCCCeEEEEEECHHHHHHHHhcC
Confidence 3599999999765555668999999998 5778889999996 677888876
Done!