Your job contains 1 sequence.
>031156
MASRLQQIEGDESVLLRVTHSNLKSFSADVRFPLQMSVESVKDKLWRKCGTSVNSMSLEL
YDDTNTKVAALTDNSRPLGFYSPLQGYRLHVIDLDPSSVTSGGWLEDTSLVEKYTISEEE
YSKRDGTFRKFKEKVLSQNPSAVENKLSNNYMEDLCSNITETDVK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031156
(165 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2076224 - symbol:EMB2804 "AT3G10220" species:3... 617 3.1e-60 1
DICTYBASE|DDB_G0277983 - symbol:tbcB "tubulin folding cof... 198 7.7e-16 1
UNIPROTKB|Q8HXL4 - symbol:CKAP1 "Uncharacterized protein"... 159 1.0e-11 1
MGI|MGI:1913661 - symbol:Tbcb "tubulin folding cofactor B... 158 1.3e-11 1
ZFIN|ZDB-GENE-030131-9296 - symbol:tbcb "tubulin folding ... 158 1.3e-11 1
UNIPROTKB|A8MVD5 - symbol:TBCB "Tubulin-folding cofactor ... 156 2.2e-11 1
UNIPROTKB|Q99426 - symbol:TBCB "Tubulin-folding cofactor ... 156 2.2e-11 1
RGD|1309965 - symbol:Tbcb "tubulin folding cofactor B" sp... 155 2.8e-11 1
UNIPROTKB|Q5E951 - symbol:TBCB "Tubulin-folding cofactor ... 151 8.6e-11 1
FB|FBgn0034451 - symbol:TBCB "tubulin-binding cofactor B"... 123 2.1e-07 1
>TAIR|locus:2076224 [details] [associations]
symbol:EMB2804 "AT3G10220" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM;IDA] [GO:0007021 "tubulin complex
assembly" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0009524 "phragmoplast" evidence=IDA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] InterPro:IPR000938 Pfam:PF01302 GO:GO:0005634
EMBL:CP002686 GO:GO:0051301 GO:GO:0009790 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS50245 GO:GO:0009524
UniGene:At.1532 UniGene:At.71154 UniGene:At.71830 OMA:GKHDGMV
EMBL:AK176183 EMBL:AK176266 IPI:IPI00518736 RefSeq:NP_187633.2
PDB:2KJ6 PDBsum:2KJ6 ProteinModelPortal:Q67Z52 SMR:Q67Z52
STRING:Q67Z52 PRIDE:Q67Z52 EnsemblPlants:AT3G10220.1 GeneID:820184
KEGG:ath:AT3G10220 TAIR:At3g10220 InParanoid:Q67Z52
PhylomeDB:Q67Z52 ProtClustDB:CLSN2690532 EvolutionaryTrace:Q67Z52
Genevestigator:Q67Z52 Uniprot:Q67Z52
Length = 243
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 116/163 (71%), Positives = 138/163 (84%)
Query: 1 MASRLQQIEGDESVLLRVTHSNLKSFSADVRFPLQMSVESVKDKLWRKCGTSVNSMSLEL 60
MA+ Q+EGD+SV L +TH+NLKSFSAD RF QMSVE+VK+KLW+KCGTSVNSM+LEL
Sbjct: 1 MATSRLQLEGDDSVHLHITHANLKSFSADARFSPQMSVEAVKEKLWKKCGTSVNSMALEL 60
Query: 61 YDDTNTKVAALTDNSRPLGFYSPLQGYRLHVIDLDPSSVTSGGWLEDTSLVEKYTISEEE 120
YDD+ +KVA L+D+SRPLGF+SP G+RLH+IDLDPSSVT+GGWLEDTSLVEKY ISEE+
Sbjct: 61 YDDSGSKVAVLSDDSRPLGFFSPFDGFRLHIIDLDPSSVTTGGWLEDTSLVEKYNISEED 120
Query: 121 YSKRDGTFRKFKEKVLSQNPSAVENKLSNNYMEDLCSNITETD 163
Y+KR +FRKFKEK +SQNP A E K NYMEDLC+NI D
Sbjct: 121 YAKRTDSFRKFKEKRVSQNPVAAEAKTKENYMEDLCANIKVGD 163
>DICTYBASE|DDB_G0277983 [details] [associations]
symbol:tbcB "tubulin folding cofactor B"
species:44689 "Dictyostelium discoideum" [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR000938 dictyBase:DDB_G0277983
Pfam:PF01302 GO:GO:0005737 GenomeReviews:CM000152_GR
EMBL:AAFI02000023 eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
OMA:GKHDGMV RefSeq:XP_642051.1 HSSP:Q20728
ProteinModelPortal:Q54Z01 EnsemblProtists:DDB0266632 GeneID:8621263
KEGG:ddi:DDB_G0277983 Uniprot:Q54Z01
Length = 270
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 51/161 (31%), Positives = 84/161 (52%)
Query: 13 SVLLRVTHSNLKSFSADVR----FPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNTK- 67
+V L +THS L S F L + ++ K+KL+R GT M L L D+
Sbjct: 31 NVRLEITHSVLTGESLGTNNFKNFSLDLKIKDFKEKLYRFVGTEPKYMELILRDENKVND 90
Query: 68 VAALTDNS-RPLGFYSPLQGYRLHVIDLDPSSVTSGGWLEDTSLVEKYTISEEEYSKRDG 126
+ + D+ + LG Y P G +H+ID DP++ S L+D S K ISEE+Y+KR+G
Sbjct: 91 ICKIDDDDDKTLGSYEPKDGMNVHIIDKDPNNFVSE--LQDISKAPKPVISEEDYNKREG 148
Query: 127 TFRKFKEK--VLSQNPSAVENKLSNNYMEDLCSNITETDVK 165
T++K+KE+ + +N + + +N T+T+++
Sbjct: 149 TYKKWKEENQLKKENDTTATTVTATT---TTTNNATDTEIE 186
>UNIPROTKB|Q8HXL4 [details] [associations]
symbol:CKAP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000938
Pfam:PF01302 GO:GO:0005634 GO:GO:0005737 eggNOG:COG5244
HOGENOM:HOG000209180 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GeneTree:ENSGT00700000104055 EMBL:AJ410870 CTD:1155
HOVERGEN:HBG003239 OMA:GKHDGMV OrthoDB:EOG44XJHQ HSSP:Q20728
EMBL:CU694686 RefSeq:NP_001192332.1 UniGene:Ssc.3245 SMR:Q8HXL4
STRING:Q8HXL4 Ensembl:ENSSSCT00000003232 GeneID:100522808
KEGG:ssc:100522808 Uniprot:Q8HXL4
Length = 244
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 41/114 (35%), Positives = 57/114 (50%)
Query: 21 SNLKSFSADVRFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNTKVAALTDNSRPLGF 80
S+L SF + R+ ++V KDKL G+ + M LELY + L LG
Sbjct: 17 SSLNSFRSQKRYSRSLTVAEFKDKLQLVVGSPASCMELELYGPDDKFYVKLDQEDALLGS 76
Query: 81 YSPLQGYRLHVIDLDPSSVTSGGWLEDTSLVEKYTISEEEYSKRDGTFRKFKEK 134
Y G R+HVID + + G ED S VEKY IS+E Y +R + R F ++
Sbjct: 77 YPVDDGCRIHVIDHSGARL---GEYEDMSKVEKYKISQEAYDQRQNSVRSFLKR 127
>MGI|MGI:1913661 [details] [associations]
symbol:Tbcb "tubulin folding cofactor B" species:10090 "Mus
musculus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
InterPro:IPR000938 MGI:MGI:1913661 Pfam:PF01302 GO:GO:0005634
GO:GO:0005737 GO:GO:0007399 GO:GO:0030154 eggNOG:COG5244
HOGENOM:HOG000209180 GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GeneTree:ENSGT00700000104055 CTD:1155 HOVERGEN:HBG003239
OMA:GKHDGMV OrthoDB:EOG44XJHQ EMBL:AK002316 EMBL:AK003655
EMBL:AK010438 EMBL:BC010684 IPI:IPI00315948 RefSeq:NP_079824.2
UniGene:Mm.27947 PDB:1V6E PDB:1WHG PDBsum:1V6E PDBsum:1WHG
ProteinModelPortal:Q9D1E6 SMR:Q9D1E6 STRING:Q9D1E6
PhosphoSite:Q9D1E6 PaxDb:Q9D1E6 PRIDE:Q9D1E6
Ensembl:ENSMUST00000006254 GeneID:66411 KEGG:mmu:66411
UCSC:uc009gds.2 InParanoid:Q9D1E6 EvolutionaryTrace:Q9D1E6
NextBio:321613 Bgee:Q9D1E6 CleanEx:MM_TBCB Genevestigator:Q9D1E6
GermOnline:ENSMUSG00000006095 Uniprot:Q9D1E6
Length = 244
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 42/114 (36%), Positives = 58/114 (50%)
Query: 21 SNLKSFSADVRFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNTKVAALTDNSRPLGF 80
S+L SF ++ R+ +++ K KL G+ + M LELY + + L LG
Sbjct: 17 SSLNSFRSEKRYSRSLTIAEFKCKLELVVGSPASCMELELYGADDKFYSKLDQEDALLGS 76
Query: 81 YSPLQGYRLHVIDLDPSSVTSGGWLEDTSLVEKYTISEEEYSKRDGTFRKFKEK 134
Y G R+HVID S V G + ED S VEKY IS E Y +R T R F ++
Sbjct: 77 YPVDDGCRIHVID--HSGVRLGEY-EDVSKVEKYEISPEAYERRQNTVRSFMKR 127
>ZFIN|ZDB-GENE-030131-9296 [details] [associations]
symbol:tbcb "tubulin folding cofactor B"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000938 Pfam:PF01302 ZFIN:ZDB-GENE-030131-9296
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 CTD:1155 HOVERGEN:HBG003239 HSSP:Q20728
EMBL:BC044438 IPI:IPI00481671 RefSeq:NP_997940.1 UniGene:Dr.860
ProteinModelPortal:Q803K6 SMR:Q803K6 STRING:Q803K6 PRIDE:Q803K6
GeneID:337350 KEGG:dre:337350 InParanoid:Q803K6 NextBio:20812190
ArrayExpress:Q803K6 Bgee:Q803K6 Uniprot:Q803K6
Length = 246
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 43/122 (35%), Positives = 62/122 (50%)
Query: 14 VLLRVTHSNLKSFSADVRFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNTKVAALTD 73
V +RVT S + SF + RF +++ K KL GT + M L+L+ ++ + L +
Sbjct: 13 VSVRVT-STVSSFEVNRRFNRGITIAEFKSKLELIVGTPASCMDLDLFSSSDKFLQKLDN 71
Query: 74 NSRPLGFYSPLQGYRLHVIDLDPSSVTSGGWLEDTSLVEKYTISEEEYSKRDGTFRKFKE 133
N LG Y R+HV D S T G D S VEK+ IS+E Y KR + R FK+
Sbjct: 72 NEALLGSYHVDDDCRIHVTD---RSGTQSGEFTDLSKVEKFEISDEAYEKRADSIRNFKK 128
Query: 134 KV 135
+
Sbjct: 129 NM 130
>UNIPROTKB|A8MVD5 [details] [associations]
symbol:TBCB "Tubulin-folding cofactor B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000938
GO:GO:0005737 HOGENOM:HOG000209180 Gene3D:2.30.30.190
SUPFAM:SSF74924 EMBL:AD001527 HOVERGEN:HBG003239 HGNC:HGNC:1989
ChiTaRS:TBCB IPI:IPI00798211 ProteinModelPortal:A8MVD5 SMR:A8MVD5
STRING:A8MVD5 PRIDE:A8MVD5 Ensembl:ENST00000392178
ArrayExpress:A8MVD5 Bgee:A8MVD5 Uniprot:A8MVD5
Length = 214
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 40/114 (35%), Positives = 59/114 (51%)
Query: 21 SNLKSFSADVRFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNTKVAALTDNSRPLGF 80
S+L +F ++ R+ +++ K KL G+ + M LELY + + L LG
Sbjct: 17 SSLNTFRSEKRYSRSLTIAEFKCKLELLVGSPASCMELELYGVDDKFYSKLDQEDALLGS 76
Query: 81 YSPLQGYRLHVIDLDPSSVTSGGWLEDTSLVEKYTISEEEYSKRDGTFRKFKEK 134
Y G R+HVID + + G ED S VEKYTIS+E Y +R T R F ++
Sbjct: 77 YPVDDGCRIHVIDHSGARL---GEYEDVSRVEKYTISQEAYDQRQDTVRSFLKR 127
>UNIPROTKB|Q99426 [details] [associations]
symbol:TBCB "Tubulin-folding cofactor B" species:9606 "Homo
sapiens" [GO:0005874 "microtubule" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0015630 "microtubule
cytoskeleton" evidence=TAS] [GO:0051084 "'de novo'
posttranslational protein folding" evidence=TAS] [GO:0044267
"cellular protein metabolic process" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_17015 InterPro:IPR000938 Pfam:PF01302
GO:GO:0005737 GO:GO:0007399 GO:GO:0030154 GO:GO:0015630
GO:GO:0051084 eggNOG:COG5244 HOGENOM:HOG000209180 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 EMBL:AD001527 CTD:1155 HOVERGEN:HBG003239
OMA:GKHDGMV OrthoDB:EOG44XJHQ EMBL:AF013488 EMBL:BT007424
EMBL:BC005969 EMBL:BC052812 EMBL:D49738 IPI:IPI00293126
RefSeq:NP_001272.2 UniGene:Hs.31053 ProteinModelPortal:Q99426
SMR:Q99426 IntAct:Q99426 MINT:MINT-2855745 STRING:Q99426
PhosphoSite:Q99426 DMDM:3023518 OGP:Q99426 PaxDb:Q99426
PeptideAtlas:Q99426 PRIDE:Q99426 DNASU:1155 Ensembl:ENST00000221855
GeneID:1155 KEGG:hsa:1155 UCSC:uc002odg.1 GeneCards:GC19P036605
HGNC:HGNC:1989 HPA:HPA041428 HPA:HPA041722 MIM:601303
neXtProt:NX_Q99426 PharmGKB:PA162405357 InParanoid:Q99426
PhylomeDB:Q99426 ChiTaRS:TBCB GenomeRNAi:1155 NextBio:4796
ArrayExpress:Q99426 Bgee:Q99426 CleanEx:HS_TBCB
Genevestigator:Q99426 GermOnline:ENSG00000105254 Uniprot:Q99426
Length = 244
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 40/114 (35%), Positives = 59/114 (51%)
Query: 21 SNLKSFSADVRFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNTKVAALTDNSRPLGF 80
S+L +F ++ R+ +++ K KL G+ + M LELY + + L LG
Sbjct: 17 SSLNTFRSEKRYSRSLTIAEFKCKLELLVGSPASCMELELYGVDDKFYSKLDQEDALLGS 76
Query: 81 YSPLQGYRLHVIDLDPSSVTSGGWLEDTSLVEKYTISEEEYSKRDGTFRKFKEK 134
Y G R+HVID + + G ED S VEKYTIS+E Y +R T R F ++
Sbjct: 77 YPVDDGCRIHVIDHSGARL---GEYEDVSRVEKYTISQEAYDQRQDTVRSFLKR 127
>RGD|1309965 [details] [associations]
symbol:Tbcb "tubulin folding cofactor B" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=ISO]
InterPro:IPR000938 Pfam:PF01302 RGD:1309965 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
HOVERGEN:HBG003239 EMBL:DQ447885 IPI:IPI00364093 UniGene:Rn.9550
ProteinModelPortal:Q1W1V7 SMR:Q1W1V7 STRING:Q1W1V7 PRIDE:Q1W1V7
UCSC:RGD:1309965 InParanoid:Q1W1V7 ArrayExpress:Q1W1V7
Genevestigator:Q1W1V7 Uniprot:Q1W1V7
Length = 244
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 44/129 (34%), Positives = 63/129 (48%)
Query: 7 QIEGDESVLLRV-THSNLKSFSADVRFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTN 65
++ G + + V S+L SF ++ R+ ++ K KL G+ + M LELY +
Sbjct: 2 EVSGTSAPTVTVFISSSLNSFRSEKRYSRSPTIAEFKCKLELVVGSPASCMELELYGADD 61
Query: 66 TKVAALTDNSRPLGFYSPLQGYRLHVIDLDPSSVTSGGWLEDTSLVEKYTISEEEYSKRD 125
+ L LG Y G R+HVID S V G + ED S VEKY IS E Y +R
Sbjct: 62 QFYSKLDQEDALLGSYPVDDGCRIHVID--HSGVRLGEY-EDVSKVEKYEISPEAYERRQ 118
Query: 126 GTFRKFKEK 134
T R F ++
Sbjct: 119 NTVRSFMKR 127
>UNIPROTKB|Q5E951 [details] [associations]
symbol:TBCB "Tubulin-folding cofactor B" species:9913 "Bos
taurus" [GO:0007023 "post-chaperonin tubulin folding pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
Reactome:REACT_17065 InterPro:IPR000938 Pfam:PF01302 GO:GO:0005829
GO:GO:0005634 GO:GO:0007399 GO:GO:0030154 Reactome:REACT_103209
eggNOG:COG5244 HOGENOM:HOG000209180 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 GO:GO:0007023
EMBL:BT021069 EMBL:BC102571 IPI:IPI00697178 RefSeq:NP_001014939.1
UniGene:Bt.55460 ProteinModelPortal:Q5E951 SMR:Q5E951 STRING:Q5E951
PRIDE:Q5E951 Ensembl:ENSBTAT00000019973 GeneID:530447
KEGG:bta:530447 CTD:1155 HOVERGEN:HBG003239 InParanoid:Q5E951
OMA:GKHDGMV OrthoDB:EOG44XJHQ NextBio:20875260 Uniprot:Q5E951
Length = 244
Score = 151 (58.2 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 40/114 (35%), Positives = 57/114 (50%)
Query: 21 SNLKSFSADVRFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNTKVAALTDNSRPLGF 80
S+L SF + R+ ++V K KL G+ + M LELY + L + LG
Sbjct: 17 SSLNSFRSQKRYSRSLTVAEFKCKLQLVVGSPASCMELELYGPDDKFCCKLDQDDALLGS 76
Query: 81 YSPLQGYRLHVIDLDPSSVTSGGWLEDTSLVEKYTISEEEYSKRDGTFRKFKEK 134
Y G R+HVID + + G ED S VEKY IS+E Y +R + R F ++
Sbjct: 77 YPVDDGCRIHVIDHSGARL---GEYEDISKVEKYEISQEAYEQRQDSIRSFLKR 127
>FB|FBgn0034451 [details] [associations]
symbol:TBCB "tubulin-binding cofactor B" species:7227
"Drosophila melanogaster" [GO:0005856 "cytoskeleton" evidence=ISS]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0035089 "establishment
of apical/basal cell polarity" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0007309 "oocyte axis specification" evidence=IMP]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0031122
"cytoplasmic microtubule organization" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0005938 GO:GO:0005634
GO:GO:0005813 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031122 GO:GO:0072686
GO:GO:0035089 GO:GO:0007309 UniGene:Dm.19962 FlyBase:FBgn0034451
EMBL:AY061489 ProteinModelPortal:Q7K1S6 STRING:Q7K1S6 PRIDE:Q7K1S6
InParanoid:Q7K1S6 ArrayExpress:Q7K1S6 Bgee:Q7K1S6 Uniprot:Q7K1S6
Length = 271
Score = 123 (48.4 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 31/118 (26%), Positives = 66/118 (55%)
Query: 14 VLLRVTHSNLKSFSADVRFPLQMSVESVKDKLWRKCGTSVNSMSLELYDDTNTKVAALTD 73
+ + V++S+ + + +V+ ++V +K KL G +M ++++ +T V+ + +
Sbjct: 40 IKVNVSNSHNDAVAFEVKLAKDLTVAQLKTKLEILTGGCAGTMKVQVFKG-DTCVSTMDN 98
Query: 74 NSRPLGFYSPLQGYRLHVIDLDPSSVTSGGWLEDTSLVEKYTISEEEYSKRDGTFRKF 131
N LG+Y+ G RLHV+D S T + D++ VEK+ +S+++Y +R + R +
Sbjct: 99 NDAQLGYYANSDGLRLHVVD---SFAT---FSFDSAPVEKFELSKDQYEQRTDSVRNY 150
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.127 0.356 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 165 165 0.00093 107 3 11 23 0.45 32
30 0.45 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 584 (62 KB)
Total size of DFA: 145 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.04u 0.13s 18.17t Elapsed: 00:00:01
Total cpu time: 18.04u 0.13s 18.17t Elapsed: 00:00:01
Start: Fri May 10 13:41:56 2013 End: Fri May 10 13:41:57 2013