Query 031157
Match_columns 165
No_of_seqs 134 out of 671
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 15:56:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031157.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031157hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wic_A Hypothetical protein ri 100.0 3E-37 1E-41 234.7 12.2 135 2-141 14-152 (152)
2 2cri_A Vesicle-associated memb 100.0 1.7E-34 5.8E-39 218.3 17.3 120 4-127 12-132 (147)
3 1z9l_A Vesicle-associated memb 100.0 2.2E-34 7.7E-39 212.7 16.1 119 4-126 8-127 (128)
4 1msp_A MSP, major sperm protei 100.0 2.6E-32 8.7E-37 201.6 16.3 118 5-126 7-125 (126)
5 1row_A SSP-19, MSP-domain prot 100.0 6.5E-28 2.2E-32 174.0 13.5 104 7-124 3-106 (109)
6 1m1s_A WR4; structural genomic 100.0 3.4E-27 1.2E-31 171.7 15.2 107 4-124 8-114 (116)
7 2ys4_A Hydrocephalus-inducing 98.5 5E-07 1.7E-11 65.0 8.9 75 11-91 29-104 (122)
8 2e6j_A Hydin protein; PAPD, st 98.3 2.2E-06 7.6E-11 60.0 8.1 71 4-74 7-81 (112)
9 3qbt_B Inositol polyphosphate 98.3 5.9E-06 2E-10 61.1 10.1 71 3-73 23-100 (140)
10 3qis_A Inositol polyphosphate 97.9 8.3E-05 2.8E-09 62.9 10.3 72 3-74 26-104 (366)
11 2qsv_A Uncharacterized protein 97.2 0.002 6.9E-08 50.4 9.0 68 6-74 2-70 (220)
12 2qsv_A Uncharacterized protein 96.8 0.006 2.1E-07 47.6 8.7 68 5-74 118-186 (220)
13 3q48_A Chaperone CUPB2; IG fol 95.9 0.23 7.9E-06 39.8 13.4 110 7-130 30-149 (257)
14 1klf_A FIMC chaperone, chapero 95.2 0.77 2.6E-05 35.4 14.5 111 7-130 2-120 (205)
15 2co7_B SAFB chaperone, putativ 95.1 0.37 1.3E-05 37.7 11.7 116 7-130 14-135 (221)
16 2xg5_A PAPD, chaperone protein 95.0 0.61 2.1E-05 36.3 12.6 110 7-130 2-120 (218)
17 1l4i_A SFAE protein; periplasm 94.4 1.3 4.4E-05 34.2 14.1 112 7-130 2-120 (206)
18 4djm_A DRAB; chaperone, PILI; 93.9 0.83 2.8E-05 36.2 11.2 84 7-96 24-112 (239)
19 4ay0_A Chaperone protein CAF1M 92.3 3.2 0.00011 32.3 12.9 110 7-130 14-130 (218)
20 3gfu_C Chaperone protein FAEE; 91.8 3.8 0.00013 32.1 14.6 107 7-129 2-115 (224)
21 1yew_A Particulate methane mon 91.0 1.5 5.2E-05 36.9 9.5 68 5-74 248-337 (382)
22 2r39_A FIXG-related protein; s 88.6 2.2 7.4E-05 29.7 7.4 50 24-73 33-83 (118)
23 3rfr_A PMOB; membrane, oxidore 86.7 2.7 9.2E-05 35.8 8.1 67 5-74 282-369 (419)
24 2xzz_A Protein-glutamine gamma 71.1 21 0.00073 24.2 7.7 55 20-75 18-75 (102)
25 2huh_A Putative DNA mismatch r 64.9 20 0.00069 26.3 6.4 68 23-97 27-94 (147)
26 3idu_A Uncharacterized protein 61.7 39 0.0013 23.8 9.5 69 20-97 31-100 (127)
27 3hn9_A Lamin-B1; structural ge 54.5 21 0.0007 25.1 4.8 41 26-67 25-71 (123)
28 3e38_A Two-domain protein cont 53.5 20 0.00069 29.5 5.3 64 26-96 270-333 (343)
29 3isy_A Bsupi, intracellular pr 52.6 57 0.0019 22.8 8.2 33 21-53 17-49 (120)
30 3zy7_A AP-1 complex subunit ga 52.6 32 0.0011 24.0 5.5 83 23-109 30-122 (122)
31 3vta_A Cucumisin; subtilisin-l 49.6 74 0.0025 28.0 8.7 50 24-73 539-591 (621)
32 2l0d_A Cell surface protein; s 46.6 48 0.0017 22.9 5.6 71 20-97 17-88 (114)
33 1yyc_A LEA protein, putative l 41.3 1E+02 0.0035 22.8 7.1 51 23-73 63-119 (174)
34 1ifr_A Lamin A/C; immunoglobul 41.1 61 0.0021 22.6 5.5 42 26-67 19-66 (121)
35 1gyu_A Adapter-related protein 40.7 61 0.0021 23.1 5.6 81 24-108 49-139 (140)
36 3jt0_A Lamin-B1; structural ge 40.6 49 0.0017 23.9 5.0 42 26-67 38-84 (144)
37 1iu1_A Gamma1-adaptin; coated 40.4 83 0.0028 22.5 6.3 68 24-95 55-128 (146)
38 4gio_A Putative lipoprotein; u 34.0 75 0.0026 21.6 4.9 49 20-68 34-88 (107)
39 1xo8_A AT1G01470; structural g 33.4 72 0.0025 22.9 5.0 50 23-72 40-95 (151)
40 2iaa_C Azurin; quinoprotein, t 33.4 43 0.0015 23.4 3.7 64 6-72 11-99 (128)
41 2lll_A Lamin-B2; immunoglobuli 33.2 76 0.0026 22.8 5.0 42 26-67 34-81 (139)
42 1wm3_A Ubiquitin-like protein 33.1 42 0.0014 20.7 3.3 21 27-47 3-23 (72)
43 2ccw_A Azurin II, AZN-2; elect 31.7 27 0.00093 24.5 2.4 64 6-72 12-100 (129)
44 3i6s_A Subtilisin-like proteas 30.4 2.9E+02 0.0098 24.5 9.3 51 24-74 560-613 (649)
45 2lv4_A Putative outer membrane 30.2 40 0.0014 24.2 3.0 36 43-78 44-79 (146)
46 3o0l_A Uncharacterized protein 29.2 94 0.0032 21.2 4.8 49 20-68 36-91 (112)
47 2io0_B Small ubiquitin-related 29.2 60 0.002 21.3 3.6 23 25-47 5-27 (91)
48 4hci_A Cupredoxin 1; structura 29.1 1.2E+02 0.004 19.5 6.1 51 9-71 25-75 (100)
49 3ndz_E Endoglucanase D; cellot 28.0 1.4E+02 0.0048 20.1 6.0 51 22-72 15-86 (107)
50 1vjj_A Protein-glutamine gluta 26.3 2E+02 0.0069 26.1 7.5 54 20-75 606-664 (692)
51 1ufg_A Lamin A, nuclear lamin; 25.9 1.4E+02 0.0049 21.6 5.5 42 26-67 50-97 (151)
52 1ex0_A Coagulation factor XIII 25.0 3E+02 0.01 25.2 8.4 55 20-75 642-699 (731)
53 2d07_B Ubiquitin-like protein 23.3 88 0.003 20.3 3.6 24 24-47 16-39 (93)
54 3q48_A Chaperone CUPB2; IG fol 23.2 74 0.0025 25.0 3.7 43 25-69 172-216 (257)
55 2io1_B Small ubiquitin-related 22.9 1.1E+02 0.0038 19.9 4.1 23 25-47 7-29 (94)
56 1nwp_A Azurin; electron transp 22.8 55 0.0019 22.8 2.6 64 6-72 12-100 (128)
57 2e9g_A AP-1 complex subunit ga 22.6 55 0.0019 23.0 2.6 68 24-95 40-113 (131)
58 4ep8_B Urease subunit beta; al 22.2 84 0.0029 21.5 3.3 62 9-73 8-85 (101)
59 1p4u_A ADP-ribosylation factor 21.9 2E+02 0.0068 20.6 5.6 79 27-109 58-151 (153)
60 3kyd_D Small ubiquitin-related 21.4 97 0.0033 21.5 3.6 24 24-47 39-62 (115)
61 1cuo_A Protein (azurin ISO-2); 21.2 41 0.0014 23.5 1.7 64 6-72 12-100 (129)
62 2q3z_A Transglutaminase 2; tra 20.3 1.7E+02 0.0058 26.6 5.8 61 13-75 590-658 (687)
No 1
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=100.00 E-value=3e-37 Score=234.69 Aligned_cols=135 Identities=28% Similarity=0.447 Sum_probs=122.3
Q ss_pred CCCCcEEEeCC-eeEEeccCCCceEEEEEEEcCCCCeEEEEEEeCCCCcEEEeCCceEeCCCCeEEEEEEecccccCCCC
Q 031157 2 STGDLVNIQPS-ELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTMQAQKEAPPD 80 (165)
Q Consensus 2 ~~~~lL~i~P~-eL~F~~~~~~~~~~~l~L~N~s~~~vaFKVKTT~p~~Y~VkP~~GvI~Pg~s~~I~Itl~~~~~~p~~ 80 (165)
..+.+|.|+|. +|.|.+++++.+++.|+|+|+++++||||||||+|++|+|||+.|+|+||+++.|.|+|+++.+
T Consensus 14 ~~~~~L~i~P~~~L~F~~~~~~~~~~~l~L~N~s~~~VaFKVKTT~p~~y~VrP~~GiI~P~~s~~V~V~lq~~~~---- 89 (152)
T 1wic_A 14 FKGPLLHISPAEELYFGSIESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGASIDIIVSPHGGLT---- 89 (152)
T ss_dssp BCCSSBCBBSSSCBCCCCSSSSCCCEEEEEEBCSSSCEEEEEEESCTTTEEEESSEEEECTTCEEEEEEEECSSSC----
T ss_pred CCCCeEEECCCCeEEEeCCCCceEEEEEEEEcCCCCeEEEEEECCCCCceeecCCCcEECCCCeEEEEEEecCccc----
Confidence 45789999999 7999999988999999999999999999999999999999999999999999999999999753
Q ss_pred CCCCCeEEEEEEEcC--CCCCccccccccccccCCCeeEEEEeEEEEe-cCCCCCCCCCCCCCC
Q 031157 81 FQCKDKFLLLSVVAP--DGATAKDIGPDMFTKEDGKVVEEFKLRVVYI-PANPPSPVPEGSEEG 141 (165)
Q Consensus 81 ~~~~dkFlVq~~~~~--~~~~~~d~~~~~f~~~~~~~i~~~kL~v~~~-~~~~~~~~~~~~~~~ 141 (165)
..++|||+||++.++ ++.+..++. ++|++..+..++++||+|+|. +..|++++++|.++|
T Consensus 90 ~~~kDKFlVqs~~v~~~~~~~~~d~~-~~wk~~~~~~i~e~kLrv~f~~~~~p~s~~~~g~~~~ 152 (152)
T 1wic_A 90 VSAQDRFLIMAAEMEQSSGTGPAELS-QFWKEVPRNKVMEHRLRCHTVESSKPNSLMLSGPSSG 152 (152)
T ss_dssp CCSSCCEEEEEEECCSSCCCSHHHHH-HHHHHSCTTTCEEEEECBCCCCSCSSSSSCCCCCSCC
T ss_pred CCCCCEEEEEEEEcCCcCCCChhhHH-HHHhccCCCceEEEEEEEEECCCCCCCCccccCCCCC
Confidence 258999999999998 555566776 899988888999999999999 788889999998775
No 2
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=100.00 E-value=1.7e-34 Score=218.25 Aligned_cols=120 Identities=33% Similarity=0.593 Sum_probs=108.6
Q ss_pred CCcEEEeCC-eeEEeccCCCceEEEEEEEcCCCCeEEEEEEeCCCCcEEEeCCceEeCCCCeEEEEEEecccccCCCCCC
Q 031157 4 GDLVNIQPS-ELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTMQAQKEAPPDFQ 82 (165)
Q Consensus 4 ~~lL~i~P~-eL~F~~~~~~~~~~~l~L~N~s~~~vaFKVKTT~p~~Y~VkP~~GvI~Pg~s~~I~Itl~~~~~~p~~~~ 82 (165)
..+|.|+|. +|.|.+++++.+++.|+|+|+++++||||||||+|++|+|+|++|+|+||+++.|.|+|+++...| +.+
T Consensus 12 ~~~L~i~P~~~L~F~~p~~~~~~~~l~L~N~s~~~VaFKVKTT~p~~y~VrP~~GiI~P~~s~~v~V~l~~~~~~p-~~~ 90 (147)
T 2cri_A 12 EQILVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSIVTVSVMLQPFDYDP-NEK 90 (147)
T ss_dssp CCCSEEESSSEEEEECCSSSCCCEEEEEECCSSSCEEEEEEESCTTSEEEESSEEECCTTCEEEEEEEECCCCCCT-TCC
T ss_pred CCeEEECCCCeEEEeCCCCceEEEEEEEECCCCCcEEEEEECCCCccEEEcCCCcEECCCCeEEEEEEECCCcCCc-ccc
Confidence 468999998 899999999999999999999999999999999999999999999999999999999999975433 457
Q ss_pred CCCeEEEEEEEcCCCCCccccccccccccCCCeeEEEEeEEEEec
Q 031157 83 CKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVVYIP 127 (165)
Q Consensus 83 ~~dkFlVq~~~~~~~~~~~d~~~~~f~~~~~~~i~~~kL~v~~~~ 127 (165)
++|||+||++.++++.+ ++ .++|++..+..++++||||+|..
T Consensus 91 ~kDKFlVqs~~~~~~~~--d~-~~~wk~~~~~~i~e~kLrv~f~~ 132 (147)
T 2cri_A 91 SKHKFMVQTIFAPPNIS--DM-EAVWKEAKPDELMDSKLRCVFEM 132 (147)
T ss_dssp SCCCEEEEEEECCTTCC--CH-HHHHHHSCTTTCEEEEEEEEEEC
T ss_pred CCCEEEEEEEEcCCCcc--cH-HHHhhcCCCCceEEEEEEEEEec
Confidence 89999999999998643 55 48999888889999999999983
No 3
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=100.00 E-value=2.2e-34 Score=212.72 Aligned_cols=119 Identities=32% Similarity=0.602 Sum_probs=107.9
Q ss_pred CCcEEEeCC-eeEEeccCCCceEEEEEEEcCCCCeEEEEEEeCCCCcEEEeCCceEeCCCCeEEEEEEecccccCCCCCC
Q 031157 4 GDLVNIQPS-ELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTMQAQKEAPPDFQ 82 (165)
Q Consensus 4 ~~lL~i~P~-eL~F~~~~~~~~~~~l~L~N~s~~~vaFKVKTT~p~~Y~VkP~~GvI~Pg~s~~I~Itl~~~~~~p~~~~ 82 (165)
..+|.|+|. +|.|.+++++.+++.|+|+|+++++||||||||+|++|+|+|++|+|+||+++.|.|+|+++...| +.+
T Consensus 8 ~~~L~i~P~~~l~F~~p~~~~~~~~l~L~N~s~~~vaFKVKTT~p~~y~VrP~~G~i~P~~s~~v~V~~~~~~~~p-~~~ 86 (128)
T 1z9l_A 8 EQILVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGVIDPGSIVTVSVMLQPFDYDP-NEK 86 (128)
T ss_dssp CCCSEEESSSEEEEESCCSSCEEEEEEEECCSSSCEEEEEEESCGGGEEEESCEEEECTTCEEEEEEEECCCCCCT-TCC
T ss_pred CCeEEECCCCeEEEcCCCCceEEEEEEEECCCCCeEEEEEECCCCCceEEeCCCcEECCCCeEEEEEEECcCcCCc-ccc
Confidence 468999998 899999999999999999999999999999999999999999999999999999999999975444 457
Q ss_pred CCCeEEEEEEEcCCCCCccccccccccccCCCeeEEEEeEEEEe
Q 031157 83 CKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVVYI 126 (165)
Q Consensus 83 ~~dkFlVq~~~~~~~~~~~d~~~~~f~~~~~~~i~~~kL~v~~~ 126 (165)
++|||+||++.++++.+ ++ .++|++..+..++++||||+|.
T Consensus 87 ~~dkF~V~s~~~~~~~~--~~-~~~w~~~~~~~i~e~kLrv~f~ 127 (128)
T 1z9l_A 87 SKHKFMVQTIFAPPNIS--DM-EAVWKEAKPDELMDSKLRCVFE 127 (128)
T ss_dssp CCCEEEEEEEECCTTCS--CH-HHHHHSCCGGGCEEEEEEEEEE
T ss_pred cCCEEEEEEEECCCCcc--hH-HHHhhcCCCCceEEEEEEEEEe
Confidence 89999999999998643 55 4899988888999999999995
No 4
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=100.00 E-value=2.6e-32 Score=201.57 Aligned_cols=118 Identities=25% Similarity=0.429 Sum_probs=105.3
Q ss_pred CcEEEeCC-eeEEeccCCCceEEEEEEEcCCCCeEEEEEEeCCCCcEEEeCCceEeCCCCeEEEEEEecccccCCCCCCC
Q 031157 5 DLVNIQPS-ELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTMQAQKEAPPDFQC 83 (165)
Q Consensus 5 ~lL~i~P~-eL~F~~~~~~~~~~~l~L~N~s~~~vaFKVKTT~p~~Y~VkP~~GvI~Pg~s~~I~Itl~~~~~~p~~~~~ 83 (165)
..|.++|. +|.|++++++.+++.|+|+|+++++||||||||+|++|+|+|++|+|+||+++.|.|+|+++...|++. .
T Consensus 7 ~~l~i~P~~~l~F~~p~~~~~~~~l~l~N~s~~~vaFKVKTT~p~~y~VrP~~Gii~P~~s~~v~V~~q~~~~~~~~~-~ 85 (126)
T 1msp_A 7 GDINTQPSQKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMRRLSVDPPCGVLDPKEKVLMAVSCDTFNAATEDL-N 85 (126)
T ss_dssp CCEEEESSSCEEEESCCSSCCCEEEEEEECSSSCEEEEEEESCTTTEEEESCEEEECTTCEEEEEEEECCCCGGGSCC-S
T ss_pred CeEEEcCCCeEEEcCcCCcceEEEEEEECCCCCeEEEEEEcCCCCcEEEECCCeEECCCCEEEEEEEecCCCCCCCcc-C
Confidence 57999999 799999999999999999999999999999999999999999999999999999999999987666553 5
Q ss_pred CCeEEEEEEEcCCCCCccccccccccccCCCeeEEEEeEEEEe
Q 031157 84 KDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVVYI 126 (165)
Q Consensus 84 ~dkFlVq~~~~~~~~~~~d~~~~~f~~~~~~~i~~~kL~v~~~ 126 (165)
+|||+||++.++++.+ +++..+||.. + ..+..|+|+|.|.
T Consensus 86 kDKf~Vq~~~~p~~~~-~~~~~~wf~~-d-~~~~~k~L~V~Yn 125 (126)
T 1msp_A 86 NDRITIEWTNTPDGAA-KQFRREWFQG-D-GMVRRKNLPIEYN 125 (126)
T ss_dssp SCEEEEEEEECCTTCC-SSCCTHHHHS-S-SCCEEEEEEEEEE
T ss_pred CCEEEEEEEECCCCcc-hhhhHHhhcC-C-CceEEEEEEEEec
Confidence 9999999999998763 5787666643 3 3689999999996
No 5
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=99.95 E-value=6.5e-28 Score=173.97 Aligned_cols=104 Identities=23% Similarity=0.339 Sum_probs=88.7
Q ss_pred EEEeCCeeEEeccCCCceEEEEEEEcCCCCeEEEEEEeCCCCcEEEeCCceEeCCCCeEEEEEEecccccCCCCCCCCCe
Q 031157 7 VNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTMQAQKEAPPDFQCKDK 86 (165)
Q Consensus 7 L~i~P~eL~F~~~~~~~~~~~l~L~N~s~~~vaFKVKTT~p~~Y~VkP~~GvI~Pg~s~~I~Itl~~~~~~p~~~~~~dk 86 (165)
|.|+|.+|.|.++ ...+.|+|+|+++++||||||||+|++|+|||++|+|+||++++|.|+++++ + .++||
T Consensus 3 L~i~P~~l~F~~~---~~~~~l~L~N~t~~~vaFKVKtT~p~~y~VrP~~G~I~P~~~~~i~I~~q~~---~---~~~dK 73 (109)
T 1row_A 3 LTADPPACTVPAA---GVSSTHKLVNGGAEKIVFKIKSSNNNEYRIAPVFGFVDPSGSKDVVITRTAG---A---PKEDK 73 (109)
T ss_dssp CEEESSSEEEETT---CEEEEEEEEECSSSCEEEEEEESCSSSEEEECSEEEECTTEEEEEEEEECSC---C---CEEEE
T ss_pred EEEECCEeEEeCC---CCeEEEEEEcCCCCeEEEEEEeCCCCceEEcCCceEECCCCeEEEEEEeCCC---C---CCCCE
Confidence 8999999999987 3479999999999999999999999999999999999999999999999985 2 36999
Q ss_pred EEEEEEEcCCCCCccccccccccccCCCeeEEEEeEEE
Q 031157 87 FLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVV 124 (165)
Q Consensus 87 FlVq~~~~~~~~~~~d~~~~~f~~~~~~~i~~~kL~v~ 124 (165)
|+||++.++++. .|. .++|++... ..+.+|++.
T Consensus 74 flvq~~~~~~~~--~d~-~~~fk~~~~--~g~~~i~l~ 106 (109)
T 1row_A 74 LVVHFASAPADA--TDA-QAAFVAVAP--AGTVTIPMS 106 (109)
T ss_dssp EEEEEEECCTTC--SCH-HHHHTTCCC--CEEEEEEEE
T ss_pred EEEEEEECCCCC--CCH-HHHhhcCCC--CceEEEEEE
Confidence 999999998764 244 489987654 345555543
No 6
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=99.95 E-value=3.4e-27 Score=171.71 Aligned_cols=107 Identities=22% Similarity=0.404 Sum_probs=91.9
Q ss_pred CCcEEEeCCeeEEeccCCCceEEEEEEEcCCCCeEEEEEEeCCCCcEEEeCCceEeCCCCeEEEEEEecccccCCCCCCC
Q 031157 4 GDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTMQAQKEAPPDFQC 83 (165)
Q Consensus 4 ~~lL~i~P~eL~F~~~~~~~~~~~l~L~N~s~~~vaFKVKTT~p~~Y~VkP~~GvI~Pg~s~~I~Itl~~~~~~p~~~~~ 83 (165)
..++.++|.+|.|++. ...+.|+|+|+++++||||||||+|+.|+|||++|+|+||++++|.|+++++ + .+
T Consensus 8 ~~~~~~~p~~l~F~~~---gg~~~l~L~N~t~~~vAFKVKtT~p~~YrVrP~~G~I~Pg~~~~I~I~~q~~---~---~k 78 (116)
T 1m1s_A 8 HSMINVDPPTGNYPAT---GGNSTHNITSESDSRLAFKVKSSNNEHYRVRPVYGFVDAKGKSKLDINRLPG---P---PK 78 (116)
T ss_dssp CCSEEEESSEEEECTT---CEEEEEEEEECSSSEEEEEEEESCTTTEEEECSEEEECTTCEEEEEEEECSC---C---SC
T ss_pred ceeeecCCCeEEEecC---CCEEEEEEECCCCCeEEEEEEecCCCceEEcCCceEECCCCeEEEEEEeCCC---C---CC
Confidence 3589999999999865 4689999999999999999999999999999999999999999999999986 2 36
Q ss_pred CCeEEEEEEEcCCCCCccccccccccccCCCeeEEEEeEEE
Q 031157 84 KDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVV 124 (165)
Q Consensus 84 ~dkFlVq~~~~~~~~~~~d~~~~~f~~~~~~~i~~~kL~v~ 124 (165)
+|||+||++.++++.. |. .++|++..+ ..+.+|++.
T Consensus 79 ~DKflVq~~~~~~d~~--d~-~~~fk~~~~--~g~~~i~l~ 114 (116)
T 1m1s_A 79 EDKIVIQYAEVPAEET--DP-MAPFKAGAQ--QGEIIVKLI 114 (116)
T ss_dssp EEEEEEEEEEECTTCC--CT-THHHHTTCC--CEEEEEEEE
T ss_pred CCEEEEEEEECCCCCC--CH-HHHHhcCCC--CceEEEEEE
Confidence 9999999999987532 44 489987654 567777654
No 7
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.53 E-value=5e-07 Score=64.97 Aligned_cols=75 Identities=19% Similarity=0.348 Sum_probs=60.7
Q ss_pred CCeeEEec-cCCCceEEEEEEEcCCCCeEEEEEEeCCCCcEEEeCCceEeCCCCeEEEEEEecccccCCCCCCCCCeEEE
Q 031157 11 PSELKFPF-ELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTMQAQKEAPPDFQCKDKFLL 89 (165)
Q Consensus 11 P~eL~F~~-~~~~~~~~~l~L~N~s~~~vaFKVKTT~p~~Y~VkP~~GvI~Pg~s~~I~Itl~~~~~~p~~~~~~dkFlV 89 (165)
|..|.|.. +.+......|.|+|.++.++.|++++. .-|.|.|+.|.|+||+++.|.|++.|.... .....+.|
T Consensus 29 p~~l~fg~~~v~~~~~~~~~l~N~g~~~~~f~~~~~--~~F~i~P~~g~L~pg~~~~i~V~F~P~~~g----~~~~~l~v 102 (122)
T 2ys4_A 29 PDKLNFSTCPVKYSTQKILLVRNIGNKNAVFHIKTC--RPFSIEPAIGTLNVGESMQLEVEFEPQSVG----DHSGRLIV 102 (122)
T ss_dssp CSEECCCSEESSSCEEEEEEEECCSSSCEEEEEECC--TTEEEESSEEEECTTCEEEEEEEECCSSSB----CCCCBCEE
T ss_pred CCeeecCCeecCCeEEEEEEEEECCCCCEEEEEecC--CCeEEECCcCEECCCCEEEEEEEEEcCCCc----cEEEEEEE
Confidence 66788865 456778899999999999999999984 479999999999999999999999986321 23455555
Q ss_pred EE
Q 031157 90 LS 91 (165)
Q Consensus 90 q~ 91 (165)
.+
T Consensus 103 ~~ 104 (122)
T 2ys4_A 103 CY 104 (122)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 8
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.33 E-value=2.2e-06 Score=60.05 Aligned_cols=71 Identities=17% Similarity=0.199 Sum_probs=60.5
Q ss_pred CCcEEEeCCeeEEec-cCCCceEEEEEEEcCCCCeEEEEEEeCCC---CcEEEeCCceEeCCCCeEEEEEEeccc
Q 031157 4 GDLVNIQPSELKFPF-ELKKQSSCSMQLTNKTDKFVAFKVKTTNP---KKYCVRPNTGIILPRTSCAVTVTMQAQ 74 (165)
Q Consensus 4 ~~lL~i~P~eL~F~~-~~~~~~~~~l~L~N~s~~~vaFKVKTT~p---~~Y~VkP~~GvI~Pg~s~~I~Itl~~~ 74 (165)
+..+.+++..|.|-. ..+....+.++|+|+++.++.|++..... ..|.+.|..|.|+||++..|.|++.+.
T Consensus 7 ~P~i~~~~~~ldFG~v~~g~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i~pg~~~~i~V~f~~~ 81 (112)
T 2e6j_A 7 GPKIHFNFELLDIGKVFTGSAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGIIEPSGVQAIQISFSSI 81 (112)
T ss_dssp CCSEEESCSEEEEEEEESSCCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEECTTBCCEEEEEECCC
T ss_pred CCEEEECcccEecEeEEECCEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEECCCCEEEEEEEEECC
Confidence 467889998899954 45677889999999999999999964221 469999999999999999999999984
No 9
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=98.30 E-value=5.9e-06 Score=61.09 Aligned_cols=71 Identities=11% Similarity=0.167 Sum_probs=61.1
Q ss_pred CCCcEEEeCCeeEEec-cCCCceEEEEEEEcCCCCeEEEEEEeC------CCCcEEEeCCceEeCCCCeEEEEEEecc
Q 031157 3 TGDLVNIQPSELKFPF-ELKKQSSCSMQLTNKTDKFVAFKVKTT------NPKKYCVRPNTGIILPRTSCAVTVTMQA 73 (165)
Q Consensus 3 ~~~lL~i~P~eL~F~~-~~~~~~~~~l~L~N~s~~~vaFKVKTT------~p~~Y~VkP~~GvI~Pg~s~~I~Itl~~ 73 (165)
+.+-|.+++.+|.|-. .+....++.|+|+|++.-++.|++.-. .+.-+.|.|..|.|.||+++.|.|++.-
T Consensus 23 ~~P~i~v~~~~ldFG~v~~~~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L~Pge~~~I~v~~~v 100 (140)
T 3qbt_B 23 FLPSLELSRREFVFENVKFRQLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYV 100 (140)
T ss_dssp TSCCEEESCCEEEEEEECBTCCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECB
T ss_pred cCCceEeeeeeEEeeeceeeeeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCcccccCCCCeeEEEEEEEE
Confidence 3567889999999964 567788999999999999999999853 2346999999999999999999999974
No 10
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=97.88 E-value=8.3e-05 Score=62.85 Aligned_cols=72 Identities=11% Similarity=0.159 Sum_probs=60.2
Q ss_pred CCCcEEEeCCeeEEec-cCCCceEEEEEEEcCCCCeEEEEEEeCCC------CcEEEeCCceEeCCCCeEEEEEEeccc
Q 031157 3 TGDLVNIQPSELKFPF-ELKKQSSCSMQLTNKTDKFVAFKVKTTNP------KKYCVRPNTGIILPRTSCAVTVTMQAQ 74 (165)
Q Consensus 3 ~~~lL~i~P~eL~F~~-~~~~~~~~~l~L~N~s~~~vaFKVKTT~p------~~Y~VkP~~GvI~Pg~s~~I~Itl~~~ 74 (165)
...-|.|++.+|.|.. .+....+..|+|+|++.-++.|++..... .-+.|.|..|.|.||+++.|.|++...
T Consensus 26 ~~P~v~v~~~~idFg~v~~~~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l~Pge~~~i~l~~~v~ 104 (366)
T 3qis_A 26 FLPSLELSRREFVFENVKFRQLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYVS 104 (366)
T ss_dssp --CCEEESCSEEEEEEECBTCCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECBC
T ss_pred cCCeEEEecCeEEeeeeeeCCeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEECCCCEEEEEEEEEEC
Confidence 3567889999999964 67788999999999999999999986432 227799999999999999999999754
No 11
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=97.18 E-value=0.002 Score=50.39 Aligned_cols=68 Identities=10% Similarity=0.192 Sum_probs=58.5
Q ss_pred cEEEeCCeeEEec-cCCCceEEEEEEEcCCCCeEEEEEEeCCCCcEEEeCCceEeCCCCeEEEEEEeccc
Q 031157 6 LVNIQPSELKFPF-ELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTMQAQ 74 (165)
Q Consensus 6 lL~i~P~eL~F~~-~~~~~~~~~l~L~N~s~~~vaFKVKTT~p~~Y~VkP~~GvI~Pg~s~~I~Itl~~~ 74 (165)
.|+++|..+.|.. ..+......++++|+++.++-++.... |..+.+++..+.|+||++..|.|++.+.
T Consensus 2 ~i~~~~~~idFg~v~~g~~~~~~~~i~N~g~~pl~i~~~~~-p~~~~~~~~~~~I~PG~~g~I~vt~~~~ 70 (220)
T 2qsv_A 2 PLQVSNARLLFPISMPEDEGVVRLVVNNTDESDLQVAVVSL-PSFVSLDDRAFRLQAREPRELNLSLAVP 70 (220)
T ss_dssp CEEESCSEEECCSBCTTCCCEEEEEEEECSSSCEEEEEEEC-CTTEECSCCEEEECSSSCEEEEEEECCC
T ss_pred ceEEecCeeEcccccCCCcceEEEEEEeCCCCceEEEeccC-CCceEeeeCcceeCCCCceEEEEEEcch
Confidence 4899999999975 445567779999999999999997644 8888889999999999999999999764
No 12
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=96.81 E-value=0.006 Score=47.62 Aligned_cols=68 Identities=15% Similarity=0.204 Sum_probs=57.0
Q ss_pred CcEEEeCCeeEEeccCCCceEEEEEEEcCCCCeEEE-EEEeCCCCcEEEeCCceEeCCCCeEEEEEEeccc
Q 031157 5 DLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAF-KVKTTNPKKYCVRPNTGIILPRTSCAVTVTMQAQ 74 (165)
Q Consensus 5 ~lL~i~P~eL~F~~~~~~~~~~~l~L~N~s~~~vaF-KVKTT~p~~Y~VkP~~GvI~Pg~s~~I~Itl~~~ 74 (165)
..+.++ ..+.|-.-.+....+.++|+|+++.++.+ +|+++. +...+.++.+.|+||++..|.|++.+.
T Consensus 118 ~~i~~~-~~~dfG~i~g~~~~~~f~i~N~G~~pL~I~~v~~sc-gct~~~~~~~~i~PGe~~~i~v~~~~~ 186 (220)
T 2qsv_A 118 GVMELS-TYLDMGQLDGETTKAAIEIRNVGAGPLRLHSVTTRN-PALTAVPDRTEIKPGGSTLLRIAVDPQ 186 (220)
T ss_dssp CCEECC-CEEEEEECTTSCEEEEEEEEECSSSCEEEEEEEECS-TTEEEEESCSEECTTCEEEEEEEECHH
T ss_pred CEEEEE-eEEeeeccCCCeEEEEEEEEECCCCCEEEEEEEeCC-CCEeeecCCccCCCCCEEEEEEEEecC
Confidence 346777 77888532267788899999999999988 887764 799999999999999999999999875
No 13
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=95.92 E-value=0.23 Score=39.83 Aligned_cols=110 Identities=14% Similarity=0.239 Sum_probs=73.0
Q ss_pred EEEeCCeeEEeccCCCceEEEEEEEcCCCCeEEEEEEeCCC----------CcEEEeCCceEeCCCCeEEEEEEeccccc
Q 031157 7 VNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNP----------KKYCVRPNTGIILPRTSCAVTVTMQAQKE 76 (165)
Q Consensus 7 L~i~P~eL~F~~~~~~~~~~~l~L~N~s~~~vaFKVKTT~p----------~~Y~VkP~~GvI~Pg~s~~I~Itl~~~~~ 76 (165)
|.|.|..++|+.. .....|+|+|.++.++.-.+..... .-|.|.|+.-.|+||+...|+|..... .
T Consensus 30 v~i~~TRvIy~~~---~k~~sl~l~N~~~~P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~pg~~q~lRI~~~~~-~ 105 (257)
T 3q48_A 30 LIAQGTRVVFPAS---EREVTLRVSNTSGTPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEPNGGAVLRIAYLKA-P 105 (257)
T ss_dssp -CCSCSEEEEETT---CSEEEEEEEECSSSCEEEEEEEESSCCSSCGGGGCCSEEEESSEEEECTTEEEEEEEEECCC-C
T ss_pred EEEcceEEEEeCC---CcEEEEEEEeCCCCeEEEEEEEEcCCCccCcccccCCEEEcCCEEEECCCCceEEEEEECCC-C
Confidence 6677778888864 3457899999999887766654321 249999999999999999999987754 3
Q ss_pred CCCCCCCCCeEEEEEEEcCCCCCccccccccccccCCCeeEEEEeEEEEecCCC
Q 031157 77 APPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVVYIPANP 130 (165)
Q Consensus 77 ~p~~~~~~dkFlVq~~~~~~~~~~~d~~~~~f~~~~~~~i~~~kL~v~~~~~~~ 130 (165)
.|.|. .--|-+...++|+... + ....=......+|++-|.|+.-
T Consensus 106 LP~Dr--ESlf~lnv~eIPp~~~--~------~~n~Lqiair~rIKLFyRP~~L 149 (257)
T 3q48_A 106 LPTDR--ESLFWLNILEVPPRDE--D------ENNALQFSFRSRFKLFFRPSQL 149 (257)
T ss_dssp CCSSS--CEEEEEEEEEECCC-----------------CCEEEEEEEEEECTTC
T ss_pred CCCCc--eeEEEEEeeecCCCCC--C------CCceEEEEEEEEEEEEEecccC
Confidence 55552 3446666666665321 1 0001123457889999987654
No 14
>1klf_A FIMC chaperone, chaperone protein FIMC; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1 PDB: 1kiu_A* 3rfz_C 1qun_A 1bf8_A 1ze3_C 3bwu_C 3jwn_C
Probab=95.23 E-value=0.77 Score=35.41 Aligned_cols=111 Identities=15% Similarity=0.232 Sum_probs=74.5
Q ss_pred EEEeCCeeEEeccCCCceEEEEEEEcCCCC-eEEEEEEeCC-----CCcEEEeCCceEeCCCCeEEEEEEe-cccccCCC
Q 031157 7 VNIQPSELKFPFELKKQSSCSMQLTNKTDK-FVAFKVKTTN-----PKKYCVRPNTGIILPRTSCAVTVTM-QAQKEAPP 79 (165)
Q Consensus 7 L~i~P~eL~F~~~~~~~~~~~l~L~N~s~~-~vaFKVKTT~-----p~~Y~VkP~~GvI~Pg~s~~I~Itl-~~~~~~p~ 79 (165)
|.+++..+.|+.. .....|+|+|.++. ++.-.+.... ..-|.|-|+.-.|+||+...|+|.. .+ ...|.
T Consensus 2 v~l~~TRvIy~~~---~k~~sl~l~N~~~~~p~LvQsWi~~~~~~~~~pfivtPPl~rl~p~~~q~lRI~~~~~-~~lP~ 77 (205)
T 1klf_A 2 VALGATRVIYPAG---QKQVQLAVTNNDENSTYLIQSWVENADGVKDGRFIVTPPLFAMKGKKENTLRILDATN-NQLPQ 77 (205)
T ss_dssp EEESCSEEEEETT---CSEEEEEEEECCSSCCEEEEEEEEETTSCCCSSEEEESSEEEECSSEEEEEEEEECSC-SCSCS
T ss_pred eEecceEEEEeCC---CcEEEEEEEcCCCCCcEEEEEEEecCCCCccCCEEEcCCeEEECCCCceEEEEEecCC-CCCCC
Confidence 5677888999875 34678999999987 7666655432 2359999999999999999999998 65 23565
Q ss_pred CCCCCCeEEEEEEEcCCCCCccccccccccccC-CCeeEEEEeEEEEecCCC
Q 031157 80 DFQCKDKFLLLSVVAPDGATAKDIGPDMFTKED-GKVVEEFKLRVVYIPANP 130 (165)
Q Consensus 80 ~~~~~dkFlVq~~~~~~~~~~~d~~~~~f~~~~-~~~i~~~kL~v~~~~~~~ 130 (165)
|. ..-|-+...++|+.....+ ... =......+|++-|.|+.-
T Consensus 78 Dr--Eslf~lnv~eIPp~~~~~~-------~~n~lqia~r~riKlFyRP~~l 120 (205)
T 1klf_A 78 DR--ESLFWMNVKAIPSMDKSKL-------TENTLQLAIISRIKLYYRPAKL 120 (205)
T ss_dssp SS--CEEEEEEEEEECCCCTTST-------TSCEEEEEEEEEEEEEEECTTC
T ss_pred Cc--eEEEEEEeEecCCCCcccc-------CCceEEEEeeeeeeEEEccccc
Confidence 52 3456666666664211000 001 023347888888887654
No 15
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=95.13 E-value=0.37 Score=37.66 Aligned_cols=116 Identities=9% Similarity=0.148 Sum_probs=73.4
Q ss_pred EEEeCCeeEEeccCCCceEEEEEEEcCCCCeEEEEEEeCC-----CCcEEEeCCceEeCCCCeEEEEEEecccccCCCCC
Q 031157 7 VNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTN-----PKKYCVRPNTGIILPRTSCAVTVTMQAQKEAPPDF 81 (165)
Q Consensus 7 L~i~P~eL~F~~~~~~~~~~~l~L~N~s~~~vaFKVKTT~-----p~~Y~VkP~~GvI~Pg~s~~I~Itl~~~~~~p~~~ 81 (165)
|.|.+..+.|+.. .....|+|+|.++.++.-.+.... ..-|.|-|+.-.|+||+...|+|.+.+. ..|.|.
T Consensus 14 v~i~~TRvIy~~~---~k~~sl~l~N~~~~p~LvQsWv~~~~~~~~~pfivtPPl~rl~p~~~q~lRI~~~~~-~lP~Dr 89 (221)
T 2co7_B 14 VKLGATRVIYHAG---TAGATLSVSNPQNYPILVQSSVKAADKSSPAPFLVMPPLFRLEANQQSQLRIVRTGG-DMPTDR 89 (221)
T ss_dssp CEESCSEEEEETT---SSCEEEEEECCSSSCEEEEEEEEETTSSSBCSEEEESSEEEECTTCEEEEEEEECCC-CCCSSS
T ss_pred EEEcceEEEEcCC---CCEEEEEEEcCCCCcEEEEEEEecCCCCccCCEEEeCCEEEECCCCceEEEEEECCC-CCCCCc
Confidence 6788888999865 346689999999988766665432 2359999999999999999999998763 356552
Q ss_pred CCCCeEEEEEEEcCCCCCcccc-ccccccccCCCeeEEEEeEEEEecCCC
Q 031157 82 QCKDKFLLLSVVAPDGATAKDI-GPDMFTKEDGKVVEEFKLRVVYIPANP 130 (165)
Q Consensus 82 ~~~dkFlVq~~~~~~~~~~~d~-~~~~f~~~~~~~i~~~kL~v~~~~~~~ 130 (165)
..-|-+...++|+.....+- ..+- ...=......+|++-|.|+.-
T Consensus 90 --Eslf~lnv~eIPp~~~~~~~~~~n~--~~~lqia~r~rIKlFyRP~~l 135 (221)
T 2co7_B 90 --ETLQWVCIKAVPPENEPSDTQAKGA--TLDLNLSINACDKLIFRPDAV 135 (221)
T ss_dssp --CEEEEEEEEEECCC-------------CEEEEEEEEEEEEEEEECTTS
T ss_pred --eEEEEEEeecCCCCcccccccccCc--ceeEEEEeeeeeeEEEecccc
Confidence 33555555566542110000 0000 000013346778888886654
No 16
>2xg5_A PAPD, chaperone protein PAPD; chaperone, chaperone-surface active protein complex; HET: EC2 EC5; 2.00A {Escherichia coli} PDB: 1pdk_A 2uy6_A 2uy7_A 2j2z_A 2xg4_A* 2w07_A* 3me0_A* 1n0l_A 2wmp_A 3dpa_A 2j7l_A 1qpp_A 1qpx_A
Probab=95.01 E-value=0.61 Score=36.35 Aligned_cols=110 Identities=15% Similarity=0.204 Sum_probs=74.8
Q ss_pred EEEeCCeeEEeccCCCceEEEEEEEcCCCC-eEEEEEEeCC-------CCcEEEeCCceEeCCCCeEEEEEEeccc-ccC
Q 031157 7 VNIQPSELKFPFELKKQSSCSMQLTNKTDK-FVAFKVKTTN-------PKKYCVRPNTGIILPRTSCAVTVTMQAQ-KEA 77 (165)
Q Consensus 7 L~i~P~eL~F~~~~~~~~~~~l~L~N~s~~-~vaFKVKTT~-------p~~Y~VkP~~GvI~Pg~s~~I~Itl~~~-~~~ 77 (165)
|.+.+..+.|+.. .....|+|+|.++. ++.-.+.... ..-|.|-|+.-.|+||+...|+|...+. ...
T Consensus 2 v~l~~TRvIy~~~---~k~~sl~l~N~~~~~p~LvQsWi~~~~~~~~~~~pfivtPPl~rl~p~~~q~lRI~~~~~~~~l 78 (218)
T 2xg5_A 2 VSLDRTRAVFDGS---EKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKL 78 (218)
T ss_dssp EEESCSEEEEETT---SSEEEEEEEECCSSSCEEEEEEEECTTSCEECSSSEEEECSEEEECTTCEEEEEEEECGGGGGS
T ss_pred cEeCceEEEEeCC---CCEEEEEEEcCCCCCcEEEEEEEecCCCCccccCCEEEcCCeEEECCCCceEEEEEecCCCCCC
Confidence 5677888999875 34678999999988 7776665432 2349999999999999999999998762 235
Q ss_pred CCCCCCCCeEEEEEEEcCCCCCccccccccccccCCCeeEEEEeEEEEecCCC
Q 031157 78 PPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVVYIPANP 130 (165)
Q Consensus 78 p~~~~~~dkFlVq~~~~~~~~~~~d~~~~~f~~~~~~~i~~~kL~v~~~~~~~ 130 (165)
|.|. ..-|-+...++|+... + .+ .=......+|++-|.|+.-
T Consensus 79 P~Dr--ESlf~lnv~eIPp~~~--~------~n-~lqia~r~rIKlFyRP~~l 120 (218)
T 2xg5_A 79 PQDR--ESLFYFNLREIPPRSE--K------AN-VLQIALQTKIKLFYRPAAI 120 (218)
T ss_dssp CSSS--CEEEEEEEEEECCCCC--C------TT-EEEEEEEEEEEEEEECGGG
T ss_pred CCCc--eEEEEEEeecCCCCCC--C------Cc-eEEEEehheeeEEEcCccc
Confidence 6652 3455555556554211 1 00 0123457888888886554
No 17
>1l4i_A SFAE protein; periplasmic chaperone, immunoglobulin fold; 2.20A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1
Probab=94.45 E-value=1.3 Score=34.16 Aligned_cols=112 Identities=15% Similarity=0.241 Sum_probs=72.4
Q ss_pred EEEeCCeeEEeccCCCceEEEEEEEcCCC-CeEEEEEEeCC-----CCcEEEeCCceEeCCCCeEEEEEE-ecccccCCC
Q 031157 7 VNIQPSELKFPFELKKQSSCSMQLTNKTD-KFVAFKVKTTN-----PKKYCVRPNTGIILPRTSCAVTVT-MQAQKEAPP 79 (165)
Q Consensus 7 L~i~P~eL~F~~~~~~~~~~~l~L~N~s~-~~vaFKVKTT~-----p~~Y~VkP~~GvI~Pg~s~~I~It-l~~~~~~p~ 79 (165)
|.+.+..+.|+.. .....|+|+|.++ .++.-.+.... ..-|.|-|+.-.|+||+...|+|. ... ...|.
T Consensus 2 v~l~~TRvIy~~~---~k~~sl~l~N~~~~~p~LvQsWv~~~~~~~~~pfivtPPl~rl~p~~~q~lRI~~~~~-~~lP~ 77 (206)
T 1l4i_A 2 VALGATRVIYPEG---QKQVQLAVTNNDDKSSYLIQSWIENAEGKKDARFVITPPLFSMQGKKENTLRIIDATN-GQMPE 77 (206)
T ss_dssp EEESCSEEEEETT---CSEEEEEEEECCTTCEEEEEEEEEETTSCBCSSEEEESSEEEEESSEEEEEEEEECCT-TCSCS
T ss_pred eEeCceEEEEeCC---CcEEEEEEEeCCCCccEEEEEEEecCCCCccCCEEEcCCeEEECCCCceEEEEEecCC-CCCCC
Confidence 5677888999875 3567899999986 77766665432 235999999999999999999998 653 34566
Q ss_pred CCCCCCeEEEEEEEcCCCCCccccccccccccCCCeeEEEEeEEEEecCCC
Q 031157 80 DFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVVYIPANP 130 (165)
Q Consensus 80 ~~~~~dkFlVq~~~~~~~~~~~d~~~~~f~~~~~~~i~~~kL~v~~~~~~~ 130 (165)
|.. .-|-+...++|+.....+ . ...=......+|++-|.|+.-
T Consensus 78 DrE--slf~lnv~eIPp~~~~~~-~-----~n~lqia~r~riKlFyRP~~l 120 (206)
T 1l4i_A 78 DRE--SLFWVNVKAIPAMDKAKT-G-----ENYLQFAIVSRIKLLYRPQGL 120 (206)
T ss_dssp SSC--EEEEEEEEEEECCC--------------CCCEEEEEEEEEEECTTC
T ss_pred Cce--EEEEEEeecCCCCccccc-C-----CceEEEEhhheeeEEEecccc
Confidence 532 344444444443211000 0 001123457889999987654
No 18
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=93.90 E-value=0.83 Score=36.19 Aligned_cols=84 Identities=14% Similarity=0.196 Sum_probs=60.1
Q ss_pred EEEeCCeeEEeccCCCceEEEEEEEcCCCCeEEEEEEeCC-----CCcEEEeCCceEeCCCCeEEEEEEecccccCCCCC
Q 031157 7 VNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTN-----PKKYCVRPNTGIILPRTSCAVTVTMQAQKEAPPDF 81 (165)
Q Consensus 7 L~i~P~eL~F~~~~~~~~~~~l~L~N~s~~~vaFKVKTT~-----p~~Y~VkP~~GvI~Pg~s~~I~Itl~~~~~~p~~~ 81 (165)
|.|.+..++|+.. .....|+|+|.++.++.-.+.... ..-|.|.|+.-.|+||+...|+|..... .+|.|.
T Consensus 24 v~l~~TRvIy~~~---~k~~sl~l~N~~~~P~LvQsWv~~~~~~~~~pfivtPPlfRlep~~~q~lRIi~~~~-~LP~DR 99 (239)
T 4djm_A 24 LHLGATRVVYNPA---SSGETLTVINDQDYPMLVQSEVLSEDQKSPAPFVVTPPLFRLDGQQSSRLRIVRTGG-EFPPDR 99 (239)
T ss_dssp CEESCSEEEECTT---SSCEEEEEEECSSSCEEEEEEEECTTSSSBCSEEEESSEEEECTTEEEEEEEEECSC-CCCSSS
T ss_pred EEEcceEEEEeCC---CCEEEEEEEeCCCCcEEEEEEEEcCCCCccCCEEEcCCeEEECCCCceEEEEEECCC-CCCCCc
Confidence 6688888999864 345689999999887665554321 2359999999999999999999987753 356552
Q ss_pred CCCCeEEEEEEEcCC
Q 031157 82 QCKDKFLLLSVVAPD 96 (165)
Q Consensus 82 ~~~dkFlVq~~~~~~ 96 (165)
..-|-+....+|+
T Consensus 100 --ESlf~lnv~eIPp 112 (239)
T 4djm_A 100 --ESLQWICVKGIPP 112 (239)
T ss_dssp --CEEEEEEEEEECC
T ss_pred --eEEEEEEEEecCC
Confidence 3445555555554
No 19
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=92.30 E-value=3.2 Score=32.26 Aligned_cols=110 Identities=15% Similarity=0.200 Sum_probs=68.0
Q ss_pred EEEeCCeeEEeccCCCceEEEEEEEcCCCCeEEEEEEeCC-------CCcEEEeCCceEeCCCCeEEEEEEecccccCCC
Q 031157 7 VNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTN-------PKKYCVRPNTGIILPRTSCAVTVTMQAQKEAPP 79 (165)
Q Consensus 7 L~i~P~eL~F~~~~~~~~~~~l~L~N~s~~~vaFKVKTT~-------p~~Y~VkP~~GvI~Pg~s~~I~Itl~~~~~~p~ 79 (165)
|.|.-..++|+.. .....|+|+|.++.+..-...... ..-|.|.|+.-.|+||+...|+|...+. .+|.
T Consensus 14 v~l~~TRvIy~~~---~k~~sl~l~N~~~~p~LvQswv~~~~~~~~~~~pFivtPPl~Rl~p~~~q~lRI~~~~~-~LP~ 89 (218)
T 4ay0_A 14 VTIGESRIIYPLD---AAGVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRLDAKQQNSLRIAQAGG-VFPR 89 (218)
T ss_dssp EEESCCEEEEETT---CSCEEEEEECCSSSCEEEEEEEECTTSCCCSSCSEEEESSEEEECTTCEEEEEEEECSC-CCCS
T ss_pred EEECceEEEECCC---CcEEEEEEEcCCCCCEEEEEEEecCCCCccccCCEEECCCeEEeCCCCceEEEEEecCC-CCCc
Confidence 5566667888764 346679999999988766654421 1249999999999999999999988763 3565
Q ss_pred CCCCCCeEEEEEEEcCCCCCccccccccccccCCCeeEEEEeEEEEecCCC
Q 031157 80 DFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVVYIPANP 130 (165)
Q Consensus 80 ~~~~~dkFlVq~~~~~~~~~~~d~~~~~f~~~~~~~i~~~kL~v~~~~~~~ 130 (165)
|. .--|-+...++|+... +- ... -......+|++-|.|+.-
T Consensus 90 DR--ESlf~lnv~eIPp~~~--~~----~n~--lqia~r~rIKlFyRP~~L 130 (218)
T 4ay0_A 90 DK--ESLKWLCVKGIPPKDE--DI----WVD--VQFAINNCIKLLVRPNEL 130 (218)
T ss_dssp SS--CEEEEEEEEEECC----------------------CEEEEEEECTTC
T ss_pred Cc--EEEEEEEEEecCCCCc--cc----cce--eEEEEEEEEEEEEcCccc
Confidence 42 2346666666665311 10 000 112346677887876543
No 20
>3gfu_C Chaperone protein FAEE; immunoglobulin like fold, chaperone, fimbrium, immunoglobulin domain, periplasm, plasmid, cell adhesion; 1.99A {Escherichia coli} PDB: 3gew_B 3f65_A 3f6i_A 3f6l_A
Probab=91.80 E-value=3.8 Score=32.07 Aligned_cols=107 Identities=15% Similarity=0.206 Sum_probs=68.2
Q ss_pred EEEeCCeeEEeccCCCceEEEEEEEcCCCC-eEEEEEEeC--C----CCcEEEeCCceEeCCCCeEEEEEEecccccCCC
Q 031157 7 VNIQPSELKFPFELKKQSSCSMQLTNKTDK-FVAFKVKTT--N----PKKYCVRPNTGIILPRTSCAVTVTMQAQKEAPP 79 (165)
Q Consensus 7 L~i~P~eL~F~~~~~~~~~~~l~L~N~s~~-~vaFKVKTT--~----p~~Y~VkP~~GvI~Pg~s~~I~Itl~~~~~~p~ 79 (165)
|.++...+.|+.. .....|+|+|.++. ++.-.+... . ..-|.|.|+.-.|+||+...|+|..... .+|.
T Consensus 2 ~~l~~TRvIy~~~---~k~~sl~l~N~~~~~p~LvQsWid~~~~~~~~~pfivtPPlfRlep~~~q~lRIi~~~~-~LP~ 77 (224)
T 3gfu_C 2 LAVDQTRYIFRGD---KDALTITVTNNDKERTFGGQAWVDNIVEKDTRPTFVVTPSFFKVKPNGQQTLRIIMASD-HLPK 77 (224)
T ss_dssp EECSCSEEEEETT---SSCEEEEEEECCSSCCEEEEEEEEESSCCSCSCSEEEESSEEEECTTCEEEEEEEECSC-CCCS
T ss_pred ccccceEEEEeCC---CceEEEEEEeCCCCccEEEEEEEecCCCCcccCCEEEcCCeEEECCCCceEEEEEECCC-CCCC
Confidence 4556667888864 34568999999875 543333321 1 2249999999999999999999987753 3565
Q ss_pred CCCCCCeEEEEEEEcCCCCCccccccccccccCCCeeEEEEeEEEEecCC
Q 031157 80 DFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVVYIPAN 129 (165)
Q Consensus 80 ~~~~~dkFlVq~~~~~~~~~~~d~~~~~f~~~~~~~i~~~kL~v~~~~~~ 129 (165)
|. .--|-+....+|+... ...=......+|++-|.|+.
T Consensus 78 DR--ESlf~lnv~eIPp~~~----------~n~Lqiair~rIKLFyRP~~ 115 (224)
T 3gfu_C 78 DK--ESVYWLNLQDIPPALE----------GSGIAVALRTKLKLFYRPKA 115 (224)
T ss_dssp SS--CEEEEEEEEEECCCCS----------SSBCCEEEEEEEEEEEECGG
T ss_pred Cc--eEEEEEEeecCCCCCC----------CCeEEEEEEEEeeEEEcccc
Confidence 52 3445555555554211 00112445778888888654
No 21
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=91.02 E-value=1.5 Score=36.94 Aligned_cols=68 Identities=13% Similarity=0.181 Sum_probs=51.8
Q ss_pred CcEEEeCCeeEEeccCCCceEEEEEEEcCCCCeEEEEEEeCCCCcEEE----------------------eCCceEeCCC
Q 031157 5 DLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCV----------------------RPNTGIILPR 62 (165)
Q Consensus 5 ~lL~i~P~eL~F~~~~~~~~~~~l~L~N~s~~~vaFKVKTT~p~~Y~V----------------------kP~~GvI~Pg 62 (165)
..+.++-.+-+|.- .++...-+++++|.++++|-..=-+|+.-+|.- .|+. -|+||
T Consensus 248 ~~V~~~v~~A~Y~v-pgR~l~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~-pI~PG 325 (382)
T 1yew_A 248 PTVSVKVEDATYRV-PGRAMRMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNS-PLAPG 325 (382)
T ss_dssp CSEEEEEEEEEEES-SCSEEEEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCS-CBCTT
T ss_pred CceEEEeeccEEec-CCcEEEEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCC-CcCCC
Confidence 34555555666665 467889999999999999998877888877733 3332 39999
Q ss_pred CeEEEEEEeccc
Q 031157 63 TSCAVTVTMQAQ 74 (165)
Q Consensus 63 ~s~~I~Itl~~~ 74 (165)
|+.+|.|+.+..
T Consensus 326 ETr~~~v~a~da 337 (382)
T 1yew_A 326 ETRTVDVTASDA 337 (382)
T ss_dssp CEEEEEEEEECH
T ss_pred ceeEEEEEeehH
Confidence 999999999854
No 22
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=88.56 E-value=2.2 Score=29.68 Aligned_cols=50 Identities=12% Similarity=0.209 Sum_probs=38.4
Q ss_pred eEEEEEEEcCCCCeEEEEEEeCCCCcEEEe-CCceEeCCCCeEEEEEEecc
Q 031157 24 SSCSMQLTNKTDKFVAFKVKTTNPKKYCVR-PNTGIILPRTSCAVTVTMQA 73 (165)
Q Consensus 24 ~~~~l~L~N~s~~~vaFKVKTT~p~~Y~Vk-P~~GvI~Pg~s~~I~Itl~~ 73 (165)
=...|+|.|.+.++..|.++......+.+. |..=.|+||+...+.|.+..
T Consensus 33 N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g~~~i~v~~g~~~~~~v~v~~ 83 (118)
T 2r39_A 33 NTYTLKVINKTQQVQEYNLDVKGLNDVSWYGKQTIQVEPGEVLNLPMSLGA 83 (118)
T ss_dssp EEEEEEEEECSSSCEEEEEEEESCSSCEEESCCEEEECTTCEEEEEEEEEE
T ss_pred EEEEEEEEECCCCCEEEEEEEeCCcccEEeCCCcEEECCCCEEEEEEEEEE
Confidence 357999999999999999998764446543 55457899998887777654
No 23
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=86.72 E-value=2.7 Score=35.83 Aligned_cols=67 Identities=15% Similarity=0.204 Sum_probs=51.5
Q ss_pred CcEEEeCCeeEEeccCCCceEEEEEEEcCCCCeEEEEEEeCCCCcEEE---------------------eCCceEeCCCC
Q 031157 5 DLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCV---------------------RPNTGIILPRT 63 (165)
Q Consensus 5 ~lL~i~P~eL~F~~~~~~~~~~~l~L~N~s~~~vaFKVKTT~p~~Y~V---------------------kP~~GvI~Pg~ 63 (165)
..|.+.-.+-+|.-| ++...-+++|+|.++++|-..=-+|+.-+|.= .|+ -|+|||
T Consensus 282 ~~V~~~v~~A~Y~vp-gR~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~s~~--pI~PGE 358 (419)
T 3rfr_A 282 EQVTTELNGGVYKVP-GRELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLSNDD--VIAPGE 358 (419)
T ss_dssp CCCEEEEEEEEEESS-SSEEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCCCCC--CBCTTC
T ss_pred CceEEEEeceEEecC-CcEEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCCCCC--CcCCCc
Confidence 345555556667654 67889999999999999988877887777761 123 599999
Q ss_pred eEEEEEEeccc
Q 031157 64 SCAVTVTMQAQ 74 (165)
Q Consensus 64 s~~I~Itl~~~ 74 (165)
+.+|.|+.+.-
T Consensus 359 Trt~~V~a~da 369 (419)
T 3rfr_A 359 SKEIVVKIQDA 369 (419)
T ss_dssp EEEEEEEEECH
T ss_pred ceEEEEEeehH
Confidence 99999999853
No 24
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=71.07 E-value=21 Score=24.17 Aligned_cols=55 Identities=11% Similarity=0.182 Sum_probs=41.5
Q ss_pred CCCceEEEEEEEcCCC---CeEEEEEEeCCCCcEEEeCCceEeCCCCeEEEEEEecccc
Q 031157 20 LKKQSSCSMQLTNKTD---KFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTMQAQK 75 (165)
Q Consensus 20 ~~~~~~~~l~L~N~s~---~~vaFKVKTT~p~~Y~VkP~~GvI~Pg~s~~I~Itl~~~~ 75 (165)
-++...+.++++|+-. +.+.|.|--..-.+-... ..|-|.||+++.+.+.+.|..
T Consensus 18 v~~~l~v~vsf~NPL~~~L~~c~~~vEG~GL~~~~~~-~~~~v~pg~~~~~~~~~~P~~ 75 (102)
T 2xzz_A 18 VGQECEVQIVFKNPLPVTLTNVVFRLEGSGLQRPKIL-NVGDIGGNETVTLRQSFVPVR 75 (102)
T ss_dssp SSSCEEEEEEEECCSSSCBCSEEEEEEETTTEEEEEE-EECCBCTTCEEEEEEEECCCS
T ss_pred cCCeEEEEEEEECCCCCcccCEEEEEECCCCCcceEE-EcCcCCCCCEEEEEEEEecCc
Confidence 3577899999999976 667888887654332222 247799999999999999864
No 25
>2huh_A Putative DNA mismatch repair protein; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.54A {Bacteroides thetaiotaomicron} SCOP: b.7.5.1
Probab=64.87 E-value=20 Score=26.25 Aligned_cols=68 Identities=13% Similarity=0.248 Sum_probs=50.9
Q ss_pred ceEEEEEEEcCCCCeEEEEEEeCCCCcEEEeCCceEeCCCCeEEEEEEecccccCCCCCCCCCeEEEEEEEcCCC
Q 031157 23 QSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDG 97 (165)
Q Consensus 23 ~~~~~l~L~N~s~~~vaFKVKTT~p~~Y~VkP~~GvI~Pg~s~~I~Itl~~~~~~p~~~~~~dkFlVq~~~~~~~ 97 (165)
...-..-|.|.|+..+.|-.-+...+.+.++ ..|.|+|+..+.|.=.-.. ++..-.+|.||.+....+
T Consensus 27 ~t~fe~YlVNdSNy~l~f~y~~~~~~~w~l~-~~G~iePntk~~ieef~~~------eln~~~~~~vQ~layK~~ 94 (147)
T 2huh_A 27 TTPFEAYLVNDSNYYLYYTYLSAEGKAWNNR-SHGLVEPNTKLLLEEFTKD------VLNEMERVAVQLIAFKDG 94 (147)
T ss_dssp TCCEEEEEEECSSSEEEEEEEEEETTEEEEE-EEEEECTTEEEEEEEECGG------GGGGCSSEEEEEEEECSS
T ss_pred CcceEEEEEeCCCcEEEEEEEEeeCCeEEEE-EeeEECCCcEEEEEeeChh------HhcCCceEEEEEEEEcCC
Confidence 3455788999999999999988777777666 6899999998877644332 122457889998888764
No 26
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=61.67 E-value=39 Score=23.76 Aligned_cols=69 Identities=10% Similarity=0.102 Sum_probs=50.3
Q ss_pred CCCceEEEEEEEcCCC-CeEEEEEEeCCCCcEEEeCCceEeCCCCeEEEEEEecccccCCCCCCCCCeEEEEEEEcCCC
Q 031157 20 LKKQSSCSMQLTNKTD-KFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDG 97 (165)
Q Consensus 20 ~~~~~~~~l~L~N~s~-~~vaFKVKTT~p~~Y~VkP~~GvI~Pg~s~~I~Itl~~~~~~p~~~~~~dkFlVq~~~~~~~ 97 (165)
.++...-.++++|.+. ..=+|+|+-...+...-.-..+ |++|++..|.+.+.+. ....+.|....-+++
T Consensus 31 ~G~~~ti~vtV~N~G~~~a~~~~V~lyvng~~v~t~~v~-La~G~s~tv~f~~~~~--------~~G~~~v~AvVD~~n 100 (127)
T 3idu_A 31 VNKLAEYEVHVKNLGGIGVPSTKVRVYINGTLYKNWTVS-LGPKEEKVLTFNWTPT--------QEGMYRINATVDEEN 100 (127)
T ss_dssp TTCCEEEEEEEEECSSSCEEEEEEEEEETTEEEEEEEEE-ECTTCEEEEEEEECCS--------SCEEEEEEEEESTTC
T ss_pred CCCEEEEEEEEEECCCCccCCcEEEEEECCEEEeeEEec-cCCCCeEEEEEEEEcC--------CCcEEEEEEEEcCCC
Confidence 3677888999999997 4478998877666654443444 9999999999998753 134567777766654
No 27
>3hn9_A Lamin-B1; structural genomics, structural genomics consortium, SGC, acetylation, chromosomal rearrangement, coiled coil, intermediate filament; 2.00A {Homo sapiens} PDB: 3umn_A 2kpw_A
Probab=54.46 E-value=21 Score=25.14 Aligned_cols=41 Identities=7% Similarity=0.134 Sum_probs=29.4
Q ss_pred EEEEEEcCCCCeEE---EEEEeCCCC---cEEEeCCceEeCCCCeEEE
Q 031157 26 CSMQLTNKTDKFVA---FKVKTTNPK---KYCVRPNTGIILPRTSCAV 67 (165)
Q Consensus 26 ~~l~L~N~s~~~va---FKVKTT~p~---~Y~VkP~~GvI~Pg~s~~I 67 (165)
..++|.|.+.+.+. |+++-...+ .| .-|..=+|+||++++|
T Consensus 25 ~fV~L~N~s~~~~~L~gW~l~r~v~~~~~~y-~Fp~~~~L~pg~~vtV 71 (123)
T 3hn9_A 25 KFIRLKNTSEQDQPMGGWEMIRKIGDTSVSY-KYTSRYVLKAGQTVTI 71 (123)
T ss_dssp SEEEEEECSSSCEECTTCEEEEEETTEEEEE-ECCTTCEECTTCEEEE
T ss_pred CEEEEEECCCCceecCCcEEEEEeCCCceEE-EcCCCcEECCCCEEEE
Confidence 36899999987775 778755433 34 4466668999999775
No 28
>3e38_A Two-domain protein containing predicted PHP-like dependent phosphoesterase; structural genomics; 2.20A {Bacteroides vulgatus atcc 8482}
Probab=53.52 E-value=20 Score=29.53 Aligned_cols=64 Identities=19% Similarity=0.216 Sum_probs=48.7
Q ss_pred EEEEEEcCCCCeEEEEEEeCCCCcEEEeCCceEeCCCCeEEEEEEecccccCCCCCCCCCeEEEEEEEcCC
Q 031157 26 CSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPD 96 (165)
Q Consensus 26 ~~l~L~N~s~~~vaFKVKTT~p~~Y~VkP~~GvI~Pg~s~~I~Itl~~~~~~p~~~~~~dkFlVq~~~~~~ 96 (165)
-.+.|+|.++- -|.++-+.+..|.+.+..=-|+++++.++.|...... + ...=+|-|.-+.+.+
T Consensus 270 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~ 333 (343)
T 3e38_A 270 VTLSITNVTDL--VLKLKKTAHDTLLVYFRDMTLKPHTRYTVRIGFKQGI--K---GGDVNFEVTNFIVAP 333 (343)
T ss_dssp EEEEEEECSSS--CEEEEECSCCTTEECCSEEEECTTEEEEEEEEECTTC--C---CCEEEEEEEEEEEET
T ss_pred eEEEeecCCCc--ceeeeccccccccccCceEEecCCCeEEEEEeccccc--c---ceEEEEEeeeeeecC
Confidence 58999998876 5677788999999999999999999999999876432 1 134566665555544
No 29
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=52.57 E-value=57 Score=22.84 Aligned_cols=33 Identities=21% Similarity=0.335 Sum_probs=23.0
Q ss_pred CCceEEEEEEEcCCCCeEEEEEEeCCCCcEEEe
Q 031157 21 KKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVR 53 (165)
Q Consensus 21 ~~~~~~~l~L~N~s~~~vaFKVKTT~p~~Y~Vk 53 (165)
+....-.|+|+|.++.++-+...+.---.|.|.
T Consensus 17 g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~ 49 (120)
T 3isy_A 17 PEQIKFNMSLKNQSERAIEFQFSTGQKFELVVY 49 (120)
T ss_dssp SSCEEEEEEEEECSSSCEEEEESSSCCEEEEEE
T ss_pred CCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEE
Confidence 356788899999999999888755332244443
No 30
>3zy7_A AP-1 complex subunit gamma-1; endocytosis, protein design, computational design; 1.09A {Mus musculus} PDB: 2a7b_A 1gyv_A 1gyw_A
Probab=52.56 E-value=32 Score=23.95 Aligned_cols=83 Identities=11% Similarity=0.131 Sum_probs=47.7
Q ss_pred ceEEEEEEEcCCCCe-EEEEEEeCCCCc--EEEeCCce-EeCC--CCeEEEEEEecccccCCCCCCCCCeEEEEEEEcCC
Q 031157 23 QSSCSMQLTNKTDKF-VAFKVKTTNPKK--YCVRPNTG-IILP--RTSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPD 96 (165)
Q Consensus 23 ~~~~~l~L~N~s~~~-vaFKVKTT~p~~--Y~VkP~~G-vI~P--g~s~~I~Itl~~~~~~p~~~~~~dkFlVq~~~~~~ 96 (165)
...-.++.+|.+..+ =-|.+..-.|+- -.+.|..| .|.| +..++=.+.+.... ....+=|+.|.+..-+.
T Consensus 30 ~~~i~~~~~N~s~~~it~f~fqaAVPKs~kL~L~p~Sg~~l~p~~~~~itQ~l~i~n~~----~~~lklR~klsY~~~g~ 105 (122)
T 3zy7_A 30 VTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVVPAFNTGTITQVIKVLNPQ----KQQLRMRIKLTFNWNGY 105 (122)
T ss_dssp EEEEEEEEEECSSSCBEEEEEEEECCTTSEEEECCCSCSCBCGGGSCCEEEEEEEECTT----CCCCCEEEEEEEEETTE
T ss_pred eEEEEEEEEECCCCccccEEEEEEcCcccEEEecCCCCCccCCCCCCCEEEEEEEECCC----CCCEEEEEEEEEEECCE
Confidence 356677888988643 345666556665 45557776 6888 66555444443321 11346677777765443
Q ss_pred CC----Ccccccccccc
Q 031157 97 GA----TAKDIGPDMFT 109 (165)
Q Consensus 97 ~~----~~~d~~~~~f~ 109 (165)
.. +..+++.+.|+
T Consensus 106 ~~~E~~~v~~fp~~~~~ 122 (122)
T 3zy7_A 106 KVQSEAEVNNFPPQSWQ 122 (122)
T ss_dssp EEEEEEEECCCCGGGTC
T ss_pred EEEEEEEECCCChhhCC
Confidence 21 23356667773
No 31
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=49.64 E-value=74 Score=28.00 Aligned_cols=50 Identities=16% Similarity=0.178 Sum_probs=37.3
Q ss_pred eEEEEEEEcCCCCeEEEEEEeCCCCc--EEEeCCceEe-CCCCeEEEEEEecc
Q 031157 24 SSCSMQLTNKTDKFVAFKVKTTNPKK--YCVRPNTGII-LPRTSCAVTVTMQA 73 (165)
Q Consensus 24 ~~~~l~L~N~s~~~vaFKVKTT~p~~--Y~VkP~~GvI-~Pg~s~~I~Itl~~ 73 (165)
.+-.-+++|.+...-.|+++.+.|.- -.|.|..=.+ +.|++..+.|++..
T Consensus 539 ~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~ 591 (621)
T 3vta_A 539 QYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRG 591 (621)
T ss_dssp EEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEE
T ss_pred EEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEe
Confidence 44456799999999999999888864 4566876555 56788777777754
No 32
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=46.60 E-value=48 Score=22.88 Aligned_cols=71 Identities=11% Similarity=0.120 Sum_probs=46.1
Q ss_pred CCCceEEEEEEEcCCC-CeEEEEEEeCCCCcEEEeCCceEeCCCCeEEEEEEecccccCCCCCCCCCeEEEEEEEcCCC
Q 031157 20 LKKQSSCSMQLTNKTD-KFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDG 97 (165)
Q Consensus 20 ~~~~~~~~l~L~N~s~-~~vaFKVKTT~p~~Y~VkP~~GvI~Pg~s~~I~Itl~~~~~~p~~~~~~dkFlVq~~~~~~~ 97 (165)
.+....-.++|+|.+. ..-+|.|+-...+...-.-..+-|.+|++..|.+++.+.. ....+.|....-+++
T Consensus 17 ~~~~~ti~atVkN~G~~~a~~~~V~ly~~g~~v~t~~v~~LaaG~s~tv~~~w~~~~-------~~G~ytl~a~VD~~n 88 (114)
T 2l0d_A 17 PNTVNTMTATIENQGNKDSTSFNVSLLVDGIVVDTQTVTSLESENSTNVDFHWTLDG-------TANSYTLTVNVDPEN 88 (114)
T ss_dssp TTSEEEEEEEEEECSSSCBCCEEEEEEETTEEEEEEEESCBCBTCEEEEEEEEECCC-------SCSEEEEEEEECTTC
T ss_pred CCCeEEEEEEEEECCCCCCCCEEEEEEECCEEEcceecccccCCCEEEEEEEEeecC-------cCceEEEEEEECCCC
Confidence 3456788899999986 4455666644333322222344599999999999877631 146677777766654
No 33
>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}
Probab=41.30 E-value=1e+02 Score=22.83 Aligned_cols=51 Identities=10% Similarity=0.216 Sum_probs=40.1
Q ss_pred ceEEEEEEEcCCC-----CeEEEEEEeCCCC-cEEEeCCceEeCCCCeEEEEEEecc
Q 031157 23 QSSCSMQLTNKTD-----KFVAFKVKTTNPK-KYCVRPNTGIILPRTSCAVTVTMQA 73 (165)
Q Consensus 23 ~~~~~l~L~N~s~-----~~vaFKVKTT~p~-~Y~VkP~~GvI~Pg~s~~I~Itl~~ 73 (165)
.....|+|+|+.. .-++|.++...-. ---+.|..|.|.++.+..+.|-+.-
T Consensus 63 ~~~l~LrV~NPN~~pLpi~gi~Y~L~vnG~~lasG~s~~~~tIpa~g~~~v~Vpv~v 119 (174)
T 1yyc_A 63 DYHAKVSVKNPYSQSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTVLDVPVKV 119 (174)
T ss_dssp EEEEEEEEEECSSSCCBCCSEEEEEEESSSCEEEEEESCCCBCCSSEEEEEEEEEEE
T ss_pred EEEEEEEEECCCCCCccccceEEEEEECCEEEEEEecCCCceECCCCcEEEEEEEEE
Confidence 4667899999976 5689999987654 3567799999999998887776653
No 34
>1ifr_A Lamin A/C; immunoglobulin, immune system; 1.40A {Homo sapiens} SCOP: b.1.16.1 PDB: 1ivt_A 3gef_A
Probab=41.08 E-value=61 Score=22.60 Aligned_cols=42 Identities=17% Similarity=0.183 Sum_probs=28.7
Q ss_pred EEEEEEcCCCCeEE---EEEEeCC---CCcEEEeCCceEeCCCCeEEE
Q 031157 26 CSMQLTNKTDKFVA---FKVKTTN---PKKYCVRPNTGIILPRTSCAV 67 (165)
Q Consensus 26 ~~l~L~N~s~~~va---FKVKTT~---p~~Y~VkP~~GvI~Pg~s~~I 67 (165)
..|+|.|.+.+.+. |+++-.. ...-+.-|..-+|+||++++|
T Consensus 19 ~fV~l~N~s~~~~~L~gW~l~r~v~~~~~~~y~Fp~~~~L~pg~~vtI 66 (121)
T 1ifr_A 19 KFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTI 66 (121)
T ss_dssp SEEEEEECSSSCEECTTCEEEEEETTSCCEEEECCSSCEECTTCEEEE
T ss_pred CEEEEEeCCCCccccCCCEEEEEcCCCccEEEEeCCCcEECCCCEEEE
Confidence 36899999887664 6776542 223444677778999998754
No 35
>1gyu_A Adapter-related protein complex 1 gamma 1 subunit; clathrin, golgi, adaptin, endocytosis, adaptor; 1.81A {Mus musculus} SCOP: b.1.10.2
Probab=40.75 E-value=61 Score=23.09 Aligned_cols=81 Identities=11% Similarity=0.206 Sum_probs=42.8
Q ss_pred eEEEEEEEcCCCC-eEEEEEEeCCCCcEEE--eCCce-EeCCCC--eEEEEEEecccccCCCCCCCCCeEEEEEEEcCCC
Q 031157 24 SSCSMQLTNKTDK-FVAFKVKTTNPKKYCV--RPNTG-IILPRT--SCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDG 97 (165)
Q Consensus 24 ~~~~l~L~N~s~~-~vaFKVKTT~p~~Y~V--kP~~G-vI~Pg~--s~~I~Itl~~~~~~p~~~~~~dkFlVq~~~~~~~ 97 (165)
..-.++.+|.+.. -=-|.++--.|+-|.+ .|..| .|.|+. .++-.+.+..... .+.+=|+.|.+..-++.
T Consensus 49 ~~i~~~f~N~s~~~it~f~fQaAVPKs~kLqL~ppSg~~L~p~~~~~ItQ~m~I~n~~~----~~l~LR~klsY~~~g~~ 124 (140)
T 1gyu_A 49 TVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVVPAFNTGTITQVIKVLNPQK----QQLRMRIKLTYNHKGSA 124 (140)
T ss_dssp EEEEEEEEECSSSCBEEEEEEEECCTTCEEEECCCSCSCBCGGGCCCEEEEEEEECTTC----CCCCEEEEEEEEETTEE
T ss_pred EEEEEEEEECCCCccccEEEEEEcCcccEEEeeCCCCCccCCCCCCCEEEEEEEeCCCC----CCEEEEEEEEEEECCeE
Confidence 4556788888763 3345555555665554 56666 588833 3443333332111 12466777777765432
Q ss_pred C----Cccccccccc
Q 031157 98 A----TAKDIGPDMF 108 (165)
Q Consensus 98 ~----~~~d~~~~~f 108 (165)
. +..+++..+|
T Consensus 125 ~~E~~~v~~fP~~~~ 139 (140)
T 1gyu_A 125 MQDLAEVNNFPPQSW 139 (140)
T ss_dssp EEEEEEECCCCGGGT
T ss_pred EEEEEEECCCChhhc
Confidence 1 2234555555
No 36
>3jt0_A Lamin-B1; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, HR5546A, LMNB1_human; 2.39A {Homo sapiens}
Probab=40.61 E-value=49 Score=23.95 Aligned_cols=42 Identities=5% Similarity=0.036 Sum_probs=28.5
Q ss_pred EEEEEEcCCCCeEE---EEEEeCCCC--cEEEeCCceEeCCCCeEEE
Q 031157 26 CSMQLTNKTDKFVA---FKVKTTNPK--KYCVRPNTGIILPRTSCAV 67 (165)
Q Consensus 26 ~~l~L~N~s~~~va---FKVKTT~p~--~Y~VkP~~GvI~Pg~s~~I 67 (165)
..|+|.|.+.+.+. |+++=...+ ..+.-|+.=+|+||++++|
T Consensus 38 kfV~L~N~s~~~~~LgGW~L~r~v~g~~~~y~FP~~~~L~pg~~VtV 84 (144)
T 3jt0_A 38 KFIRLKNTSEQDQPMGGWEMIRKIGDTSVSYKYTSRYVLKAGQTVTI 84 (144)
T ss_dssp SEEEEEECSSSCEECTTCEEEEEETTEEEEEECCTTCEECTTCEEEE
T ss_pred CEEEEEECCCCceecCCcEEEEEeCCCceEEEcCCCcEECCCCEEEE
Confidence 36899999987774 566543332 2345566668999999775
No 37
>1iu1_A Gamma1-adaptin; coated PITS, endocytosis; 1.80A {Homo sapiens} SCOP: b.1.10.2
Probab=40.40 E-value=83 Score=22.52 Aligned_cols=68 Identities=13% Similarity=0.183 Sum_probs=37.6
Q ss_pred eEEEEEEEcCCCC-eEEEEEEeCCCCcE--EEeCCce-EeCCCC--eEEEEEEecccccCCCCCCCCCeEEEEEEEcC
Q 031157 24 SSCSMQLTNKTDK-FVAFKVKTTNPKKY--CVRPNTG-IILPRT--SCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAP 95 (165)
Q Consensus 24 ~~~~l~L~N~s~~-~vaFKVKTT~p~~Y--~VkP~~G-vI~Pg~--s~~I~Itl~~~~~~p~~~~~~dkFlVq~~~~~ 95 (165)
..-.++.+|.+.. -=-|.+.--.|+-| .+.|..| .|.|+. .++-.+.+..... .+.+=|+.|.|..-+
T Consensus 55 ~~i~~~f~N~s~~~it~f~fQaAVPK~~kLqL~ppSg~~L~p~~~~~ItQ~~~I~n~~~----~~lklR~klsY~~~g 128 (146)
T 1iu1_A 55 TVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSIVPAFNTGTITQVIKVLNPQK----QQLRMRIKLTYNHKG 128 (146)
T ss_dssp EEEEEEEEECSSSCBEEEEEEEECCTTSEEEECCCSCSCBCGGGCCCEEEEEEEECTTC----CCCCCEEEEEEEETT
T ss_pred EEEEEEEEeCCCCccccEEEEEEcCcccEEEeeCCCCCccCCCCCCCEEEEEEEeCCCC----CCEEEEEEEEEEECC
Confidence 4456788888763 33455555556654 4556666 588843 3333333322111 124677888777654
No 38
>4gio_A Putative lipoprotein; unknown function; 1.90A {Campylobacter jejuni subsp}
Probab=33.98 E-value=75 Score=21.62 Aligned_cols=49 Identities=14% Similarity=0.068 Sum_probs=33.7
Q ss_pred CCCceEEEEEEEcCCCCeEEEEEEeCCCCcEEEeCC------ceEeCCCCeEEEE
Q 031157 20 LKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPN------TGIILPRTSCAVT 68 (165)
Q Consensus 20 ~~~~~~~~l~L~N~s~~~vaFKVKTT~p~~Y~VkP~------~GvI~Pg~s~~I~ 68 (165)
.++.....++++|.++..+.||+.==..+-+.|.+. .=.|.+++++.|.
T Consensus 34 ~nG~l~v~v~~~s~~~~~l~Yrf~WyD~~G~~v~~~~~~~W~~~~l~g~~~~~i~ 88 (107)
T 4gio_A 34 SNGYLEFEVILRSTFAKDVIYKVDWLDKDGFVLRDVLNEDYQALRIPAGQEVILR 88 (107)
T ss_dssp TTSCEEEEEEECCSSCEEEEEEEEEECTTSCBCCSSCCCCCEEEEECTTCCEEEE
T ss_pred cCCEEEEEEEecCCCceEEEEEEEEECCCCCCcCCCCCCCCEEEEEcCCCeEEEE
Confidence 456677889999998999999987666666666542 1245555555444
No 39
>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1
Probab=33.42 E-value=72 Score=22.87 Aligned_cols=50 Identities=12% Similarity=0.189 Sum_probs=38.8
Q ss_pred ceEEEEEEEcCCC-----CeEEEEEEeCCCCc-EEEeCCceEeCCCCeEEEEEEec
Q 031157 23 QSSCSMQLTNKTD-----KFVAFKVKTTNPKK-YCVRPNTGIILPRTSCAVTVTMQ 72 (165)
Q Consensus 23 ~~~~~l~L~N~s~-----~~vaFKVKTT~p~~-Y~VkP~~GvI~Pg~s~~I~Itl~ 72 (165)
.....|+|+|+.. .-++|.++...-.. --+.|..|.|.++.+..+.|-+.
T Consensus 40 ~~~~~l~V~NPN~~~lpi~gi~y~l~vng~~lasG~~~~~~~ipa~g~~~v~vpv~ 95 (151)
T 1xo8_A 40 EYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVV 95 (151)
T ss_dssp CEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEECCC
T ss_pred EEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEecCCCcEECCCCcEEEEEEEE
Confidence 4667899999976 56799998876553 46678889999999888777654
No 40
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=33.38 E-value=43 Score=23.43 Aligned_cols=64 Identities=13% Similarity=0.107 Sum_probs=36.8
Q ss_pred cEEEeCCeeEEeccCCCceEEEEEEEcCCCCe-----EEEEEEeCC-------------C-CcEE------EeCCceEeC
Q 031157 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKF-----VAFKVKTTN-------------P-KKYC------VRPNTGIIL 60 (165)
Q Consensus 6 lL~i~P~eL~F~~~~~~~~~~~l~L~N~s~~~-----vaFKVKTT~-------------p-~~Y~------VkP~~GvI~ 60 (165)
-+.++|.+|..+.. ..+-.|+++|.+..+ --|-+-+.. + ..|. +--..++|.
T Consensus 11 ~m~F~p~~i~V~k~---G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~ 87 (128)
T 2iaa_C 11 SMQFNTKSIVVDKT---CKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIG 87 (128)
T ss_dssp TSCBSCSEEEECTT---CSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBC
T ss_pred CceEecCEEEEecC---CcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeC
Confidence 35667777776332 235579999998643 334333321 0 0110 111245789
Q ss_pred CCCeEEEEEEec
Q 031157 61 PRTSCAVTVTMQ 72 (165)
Q Consensus 61 Pg~s~~I~Itl~ 72 (165)
||++..|.++..
T Consensus 88 pGes~~vtf~~~ 99 (128)
T 2iaa_C 88 GGETDSVTFDVS 99 (128)
T ss_dssp TTCEEEEEEESS
T ss_pred CCCEEEEEEecc
Confidence 999999999863
No 41
>2lll_A Lamin-B2; immunoglobulin-like fold, structural protein, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=33.21 E-value=76 Score=22.75 Aligned_cols=42 Identities=19% Similarity=0.106 Sum_probs=29.2
Q ss_pred EEEEEEcCCCCeEE---EEEEeCCCC---cEEEeCCceEeCCCCeEEE
Q 031157 26 CSMQLTNKTDKFVA---FKVKTTNPK---KYCVRPNTGIILPRTSCAV 67 (165)
Q Consensus 26 ~~l~L~N~s~~~va---FKVKTT~p~---~Y~VkP~~GvI~Pg~s~~I 67 (165)
..|+|.|.+.+.+. |+++-...+ .-+.-|..=+|+||++++|
T Consensus 34 efV~L~N~s~~~~~L~GW~L~r~v~g~~~~~y~Fp~~~~L~pg~~VtI 81 (139)
T 2lll_A 34 KFVQLKNNSDKDQSLGNWRIKRQVLEGEEIAYKFTPKYILRAGQMVTV 81 (139)
T ss_dssp SEEEEEECSSSCEECSSCEEEEEETTSCEEEEECCTTCEECTTCEEEE
T ss_pred CEEEEEECCCCccccCCCEEEEecCCCccEEEEECCCcEECCCCEEEE
Confidence 46899999987764 677755332 3344577778999998764
No 42
>1wm3_A Ubiquitin-like protein SMT3B; ubiquitin fold, half-open barrel, two helices, protein transport; 1.20A {Homo sapiens} SCOP: d.15.1.1 PDB: 1wm2_A 3uin_B 3uio_B 2ckh_B
Probab=33.14 E-value=42 Score=20.67 Aligned_cols=21 Identities=24% Similarity=0.589 Sum_probs=15.8
Q ss_pred EEEEEcCCCCeEEEEEEeCCC
Q 031157 27 SMQLTNKTDKFVAFKVKTTNP 47 (165)
Q Consensus 27 ~l~L~N~s~~~vaFKVKTT~p 47 (165)
+|++.....+.+.|||+.+.+
T Consensus 3 ~lkV~~~~g~~v~~~v~~~t~ 23 (72)
T 1wm3_A 3 NLKVAGQDGSVVQFKIKRHTP 23 (72)
T ss_dssp EEEEECTTSCEEEEEECTTSC
T ss_pred EEEEECCCCCEEEEEECCCCh
Confidence 577777777788888887764
No 43
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=31.67 E-value=27 Score=24.51 Aligned_cols=64 Identities=16% Similarity=0.121 Sum_probs=36.4
Q ss_pred cEEEeCCeeEEeccCCCceEEEEEEEcCCCCe-----EEEEEEeCC-------------C-CcEE------EeCCceEeC
Q 031157 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKF-----VAFKVKTTN-------------P-KKYC------VRPNTGIIL 60 (165)
Q Consensus 6 lL~i~P~eL~F~~~~~~~~~~~l~L~N~s~~~-----vaFKVKTT~-------------p-~~Y~------VkP~~GvI~ 60 (165)
-+.++|.+|..+.. ...-.|+++|...-+ --|-+-+.. + ..|. +--...+|.
T Consensus 12 ~m~F~p~~i~V~k~---G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~ 88 (129)
T 2ccw_A 12 AMQYNVKEIVVDKS---CKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIG 88 (129)
T ss_dssp TSCBSCSEEEECTT---CSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBC
T ss_pred CccEecceEEEecC---CCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEEC
Confidence 35566777666332 235579999998653 334443321 0 0110 000235789
Q ss_pred CCCeEEEEEEec
Q 031157 61 PRTSCAVTVTMQ 72 (165)
Q Consensus 61 Pg~s~~I~Itl~ 72 (165)
||++..|.++..
T Consensus 89 pGet~svtf~~~ 100 (129)
T 2ccw_A 89 GGESDSVTFDVS 100 (129)
T ss_dssp TTCEEEEEEEGG
T ss_pred CCCEEEEEEecc
Confidence 999999998763
No 44
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=30.43 E-value=2.9e+02 Score=24.53 Aligned_cols=51 Identities=20% Similarity=0.210 Sum_probs=38.6
Q ss_pred eEEEEEEEcCCCCeEEEEEEeCCCCcEE--EeCCceEe-CCCCeEEEEEEeccc
Q 031157 24 SSCSMQLTNKTDKFVAFKVKTTNPKKYC--VRPNTGII-LPRTSCAVTVTMQAQ 74 (165)
Q Consensus 24 ~~~~l~L~N~s~~~vaFKVKTT~p~~Y~--VkP~~GvI-~Pg~s~~I~Itl~~~ 74 (165)
.+..-++||.+...-.|+++.+.|.... |.|..=.. +.|++....|++...
T Consensus 560 ~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~ 613 (649)
T 3i6s_A 560 QKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYI 613 (649)
T ss_dssp EEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEEC
T ss_pred EEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEec
Confidence 5677889999988888999999987655 56887655 589999988888753
No 45
>2lv4_A Putative outer membrane or exported protein; antivirulence, adhesion, protein binding; NMR {Salmonella enterica subsp}
Probab=30.18 E-value=40 Score=24.24 Aligned_cols=36 Identities=17% Similarity=0.338 Sum_probs=29.1
Q ss_pred EeCCCCcEEEeCCceEeCCCCeEEEEEEecccccCC
Q 031157 43 KTTNPKKYCVRPNTGIILPRTSCAVTVTMQAQKEAP 78 (165)
Q Consensus 43 KTT~p~~Y~VkP~~GvI~Pg~s~~I~Itl~~~~~~p 78 (165)
++-+|+.-.+.=...+|.|||++.|.+..+.-+..|
T Consensus 44 n~pSpDLtvisiDk~vL~PGESA~it~IvKDid~nP 79 (146)
T 2lv4_A 44 NTPSPDLTVMSIDKSVLSPGESATITTIVKDIDGNP 79 (146)
T ss_dssp CCBCGGGCEEECCCCCBCTTCEEEEEEECBBTTSCB
T ss_pred cCCCCCcEEEecCccccCCCcceEEEEEEEeCCCCc
Confidence 344678888888889999999999999998765544
No 46
>3o0l_A Uncharacterized protein; PFAM DUF1425 family member, structural genomics, joint cente structural genomics, JCSG, protein structure initiative; HET: MSE; 1.81A {Shewanella loihica}
Probab=29.22 E-value=94 Score=21.24 Aligned_cols=49 Identities=12% Similarity=-0.003 Sum_probs=33.1
Q ss_pred CCCceEEEEEEEcCCCCe--EEEEEEeCCCCcEEEeCCce-----EeCCCCeEEEE
Q 031157 20 LKKQSSCSMQLTNKTDKF--VAFKVKTTNPKKYCVRPNTG-----IILPRTSCAVT 68 (165)
Q Consensus 20 ~~~~~~~~l~L~N~s~~~--vaFKVKTT~p~~Y~VkP~~G-----vI~Pg~s~~I~ 68 (165)
.+......+.|+|.+..+ +.||+-==..+-+.|.|... .|.+++++.|.
T Consensus 36 ~~g~l~~~~~l~N~~~~~~~l~Yrf~WyD~~Gl~v~~~~~~W~~l~l~~~~~~~l~ 91 (112)
T 3o0l_A 36 EAGFLRARGTIISKSPKDQRLQYKFTWYDINGATVEDEGVSWKSLKLHGKQQMQVT 91 (112)
T ss_dssp GGGCEEEEEEEEECSSSCEEEEEEEEEECTTSCBCCCTTCCCEEEEECTTCEEEEE
T ss_pred cCCeEEEEEEEEeCCCCCEEEEEEEEEECCCCCCcCCCCCCcEEEEECCCCeEEEE
Confidence 456788899999999876 77777655666777765411 35555555444
No 47
>2io0_B Small ubiquitin-related modifier 2 precursor; SUMO, SENP, ULP, complex, protein binding, hydrolase; 2.30A {Homo sapiens} SCOP: d.15.1.1
Probab=29.19 E-value=60 Score=21.27 Aligned_cols=23 Identities=22% Similarity=0.520 Sum_probs=17.9
Q ss_pred EEEEEEEcCCCCeEEEEEEeCCC
Q 031157 25 SCSMQLTNKTDKFVAFKVKTTNP 47 (165)
Q Consensus 25 ~~~l~L~N~s~~~vaFKVKTT~p 47 (165)
.-+|++.....+.+.|||+.|.+
T Consensus 5 ~i~ikVk~~~g~~v~~~vk~~t~ 27 (91)
T 2io0_B 5 HINLKVAGQDGSVVQFKIKRHTP 27 (91)
T ss_dssp EEEEEEECTTSCEEEEEEETTSC
T ss_pred eEEEEEECCCCCEEEEEECCCCh
Confidence 34688888777889999997765
No 48
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=29.10 E-value=1.2e+02 Score=19.50 Aligned_cols=51 Identities=20% Similarity=0.293 Sum_probs=30.9
Q ss_pred EeCCeeEEeccCCCceEEEEEEEcCCCCeEEEEEEeCCCCcEEEeCCceEeCCCCeEEEEEEe
Q 031157 9 IQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTM 71 (165)
Q Consensus 9 i~P~eL~F~~~~~~~~~~~l~L~N~s~~~vaFKVKTT~p~~Y~VkP~~GvI~Pg~s~~I~Itl 71 (165)
.+|++|..+. ..+-.+.++|.....-.|-+.... ..+.+.||++..+.++.
T Consensus 25 F~P~~i~v~~----G~tV~~~~~n~d~~~H~~~~~~~~--------~~~~~~pg~~~~~~~t~ 75 (100)
T 4hci_A 25 FNPNVITIPI----NESTTLLLKNKGKSEHTFTIKKLG--------IDVVVESGKEKNITVKP 75 (100)
T ss_dssp EESSEEEECT----TSCEEEEEEECSSSCEEEEEGGGT--------EEEEECTTCEEEEEECC
T ss_pred EeCCEEEECC----CCEEEEEEEcCCCceEEEEEecCC--------cceeecCCcceeEEEec
Confidence 4566666543 234457778887655556553321 13568889988877764
No 49
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=28.05 E-value=1.4e+02 Score=20.14 Aligned_cols=51 Identities=14% Similarity=0.199 Sum_probs=33.5
Q ss_pred CceEEEEEEEcCCCCeEE-EEEEeC-----------------CCCcEEEeCC--ceEeCC-CCeEEEEEEec
Q 031157 22 KQSSCSMQLTNKTDKFVA-FKVKTT-----------------NPKKYCVRPN--TGIILP-RTSCAVTVTMQ 72 (165)
Q Consensus 22 ~~~~~~l~L~N~s~~~va-FKVKTT-----------------~p~~Y~VkP~--~GvI~P-g~s~~I~Itl~ 72 (165)
......++|+|.+..+|. ++|.=+ .-..|.+++. -|-|+| |+++.+-+.-.
T Consensus 15 ~Gf~~~vtVtN~g~~~i~gWtv~~~~p~g~~it~~Wna~~s~sG~~vt~~n~~wN~~la~~G~s~~fGf~g~ 86 (107)
T 3ndz_E 15 SGASVNVTIKNNGTTPINGWTLKWTMPINQTITNMWSASFVASGTTLSVTNAGYNGTIAANGGTQSFGFNIN 86 (107)
T ss_dssp SEEEEEEEEEECSSSCEESCEEEEECCTTEEEEEEESEEEEEETTEEEEEECSTTCEECTTTEEEEEEEEEE
T ss_pred CCEEEEEEEEeCCCCcccCcEEEEEcCCCCEEecccceEEEecCCEEEEEECCcccccCCCCccEEEEEEEe
Confidence 345678999998866543 333322 2357888864 488999 98877666544
No 50
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=26.27 E-value=2e+02 Score=26.10 Aligned_cols=54 Identities=13% Similarity=0.213 Sum_probs=39.9
Q ss_pred CCCceEEEEEEEcCCC---CeEEEEEEeCCCC--cEEEeCCceEeCCCCeEEEEEEecccc
Q 031157 20 LKKQSSCSMQLTNKTD---KFVAFKVKTTNPK--KYCVRPNTGIILPRTSCAVTVTMQAQK 75 (165)
Q Consensus 20 ~~~~~~~~l~L~N~s~---~~vaFKVKTT~p~--~Y~VkP~~GvI~Pg~s~~I~Itl~~~~ 75 (165)
-++...+.++++|+-. ..+.|.|--..=. .-.++ .|-|.||+++.+.+.+.|..
T Consensus 606 v~~~l~v~v~f~NPL~~~L~~c~~~vEG~GL~~~~~~~~--~~~v~pg~~~~~~~~~~P~~ 664 (692)
T 1vjj_A 606 VRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKID--VPTLGPKERSRVRFDILPSR 664 (692)
T ss_dssp TTSCEEEEEEEECCSSSCBCSEEEEEECTTTSSSCEEEE--ECCBCTTCEEEEEEEECCCS
T ss_pred cCCeEEEEEEEECCCCCcccceEEEEECCCCCCCceEEE--cCccCCCCEEEEEEEEEecc
Confidence 3577889999999976 5678888764321 12222 47799999999999999863
No 51
>1ufg_A Lamin A, nuclear lamin; immunoglobulin like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: b.1.16.1
Probab=25.87 E-value=1.4e+02 Score=21.56 Aligned_cols=42 Identities=12% Similarity=0.158 Sum_probs=28.3
Q ss_pred EEEEEEcCCCCeEE---EEEEeC-C--CCcEEEeCCceEeCCCCeEEE
Q 031157 26 CSMQLTNKTDKFVA---FKVKTT-N--PKKYCVRPNTGIILPRTSCAV 67 (165)
Q Consensus 26 ~~l~L~N~s~~~va---FKVKTT-~--p~~Y~VkP~~GvI~Pg~s~~I 67 (165)
..|+|.|.+.+.+. |+|+=. . ...-+.-|..=+|+||++++|
T Consensus 50 efV~L~N~s~~~~~L~GW~L~r~vdg~~~~~y~Fp~~~~L~pg~tVtI 97 (151)
T 1ufg_A 50 KFVRLRNKSNEDQSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTI 97 (151)
T ss_dssp SEEEEEECSSSCEECSSCEEEEEETTSCCEEEECCTTCEECTTCEEEE
T ss_pred CEEEEEECCCCccccCCCEEEEecCCCccEEEEECCCcEECCCCEEEE
Confidence 36889999887664 677643 2 223444677778999998754
No 52
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=24.99 E-value=3e+02 Score=25.18 Aligned_cols=55 Identities=11% Similarity=0.043 Sum_probs=39.5
Q ss_pred CCCceEEEEEEEcCCCCe---EEEEEEeCCCCcEEEeCCceEeCCCCeEEEEEEecccc
Q 031157 20 LKKQSSCSMQLTNKTDKF---VAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTMQAQK 75 (165)
Q Consensus 20 ~~~~~~~~l~L~N~s~~~---vaFKVKTT~p~~Y~VkP~~GvI~Pg~s~~I~Itl~~~~ 75 (165)
-++...+.++++|+-..+ ..|.|--..=.+=.. =..|-|.||+++.+.+.+.|..
T Consensus 642 v~~~l~v~vsf~NPL~~~L~~c~~~vEG~GL~~~~~-~~~~~v~pg~~~~~~~~~~P~~ 699 (731)
T 1ex0_A 642 VGSDMTVTVQFTNPLKETLRNVWVHLDGPGVTRPMK-KMFREIRPNSTVQWEEVCRPWV 699 (731)
T ss_dssp TTSCEEEEEEEECCSSSCEEEEEEEEEETTTEEEEE-EEEEEECTTCEEEEEEEECCSS
T ss_pred cCCeEEEEEEEECCCCCcccceEEEEECCCCCceee-EecCccCCCCEEEEEEEEEecc
Confidence 367789999999998754 567766543222222 2258899999999999999863
No 53
>2d07_B Ubiquitin-like protein SMT3B; hydrolase; 2.10A {Homo sapiens} SCOP: d.15.1.1 PDB: 2rpq_A 2awt_A 2io3_B 2iyd_B 1u4a_A 2k1f_A
Probab=23.27 E-value=88 Score=20.35 Aligned_cols=24 Identities=21% Similarity=0.505 Sum_probs=17.0
Q ss_pred eEEEEEEEcCCCCeEEEEEEeCCC
Q 031157 24 SSCSMQLTNKTDKFVAFKVKTTNP 47 (165)
Q Consensus 24 ~~~~l~L~N~s~~~vaFKVKTT~p 47 (165)
..-+|++.....+.+.|||+.+.+
T Consensus 16 ~~i~ikV~~~~g~~i~~~v~~~t~ 39 (93)
T 2d07_B 16 DHINLKVAGQDGSVVQFKIKRHTP 39 (93)
T ss_dssp CEEEEEEECTTSCEEEEEEETTSC
T ss_pred CeEEEEEECCCCCEEEEEEccCCH
Confidence 345677777767778888887654
No 54
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=23.16 E-value=74 Score=24.98 Aligned_cols=43 Identities=21% Similarity=0.320 Sum_probs=27.5
Q ss_pred EEEEEEEcCCCCeEEEE-EEeCC-CCcEEEeCCceEeCCCCeEEEEE
Q 031157 25 SCSMQLTNKTDKFVAFK-VKTTN-PKKYCVRPNTGIILPRTSCAVTV 69 (165)
Q Consensus 25 ~~~l~L~N~s~~~vaFK-VKTT~-p~~Y~VkP~~GvI~Pg~s~~I~I 69 (165)
...|+++|+|..++.|- ++... ...+.. ..|.|.|+++..+.+
T Consensus 172 ~~~L~v~Nptpyyvtl~~l~~~~~~~~~~~--~~~mV~P~s~~~~~l 216 (257)
T 3q48_A 172 KTVVQVNNPTPYYVSFASVELIVDGRVMSV--GKGMVAPFSTKEFDW 216 (257)
T ss_dssp --CEEEEECSSSCEEEEEEEEEETTEEEEE--EEEEECTTEEEEECC
T ss_pred CcEEEEECCCceEEEEEEEEEccCCeeccc--cceeEcCCceeEEec
Confidence 34599999999998874 33222 122222 347999999888754
No 55
>2io1_B Small ubiquitin-related modifier 3 precursor; SUMO, SENP, ULP, complex, protein binding, hydrolase; 2.60A {Homo sapiens} SCOP: d.15.1.1
Probab=22.92 E-value=1.1e+02 Score=19.93 Aligned_cols=23 Identities=22% Similarity=0.520 Sum_probs=16.8
Q ss_pred EEEEEEEcCCCCeEEEEEEeCCC
Q 031157 25 SCSMQLTNKTDKFVAFKVKTTNP 47 (165)
Q Consensus 25 ~~~l~L~N~s~~~vaFKVKTT~p 47 (165)
.-+|++.....+.+.|||+.+.+
T Consensus 7 ~i~ikVk~~~g~~i~~~v~~~t~ 29 (94)
T 2io1_B 7 HINLKVAGQDGSVVQFKIKRHTP 29 (94)
T ss_dssp EEEEEEECTTSCEEEEEEETTSC
T ss_pred eEEEEEECCCCCEEEEEECCCCH
Confidence 44677777777788888887764
No 56
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=22.79 E-value=55 Score=22.84 Aligned_cols=64 Identities=13% Similarity=0.143 Sum_probs=36.1
Q ss_pred cEEEeCCeeEEeccCCCceEEEEEEEcCCCCe-----EEEEEEeCC-------------CC-cE------EEeCCceEeC
Q 031157 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKF-----VAFKVKTTN-------------PK-KY------CVRPNTGIIL 60 (165)
Q Consensus 6 lL~i~P~eL~F~~~~~~~~~~~l~L~N~s~~~-----vaFKVKTT~-------------p~-~Y------~VkP~~GvI~ 60 (165)
-+.++|.+|..+.. ..+-.|+++|.+..+ --|-+-+.. ++ .| ++--..++|.
T Consensus 12 ~m~F~p~~i~V~k~---G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~ 88 (128)
T 1nwp_A 12 QMSFNTKDIAIDKS---CKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIG 88 (128)
T ss_dssp TSCBSCSEEEECTT---CSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBC
T ss_pred CccEecCEEEEecC---CCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeC
Confidence 35667777776322 235579999998643 334443321 00 01 0011234799
Q ss_pred CCCeEEEEEEec
Q 031157 61 PRTSCAVTVTMQ 72 (165)
Q Consensus 61 Pg~s~~I~Itl~ 72 (165)
||++..|.++..
T Consensus 89 pGet~svtf~~~ 100 (128)
T 1nwp_A 89 AGEKDSVTFDVS 100 (128)
T ss_dssp TTCEEEEEEEGG
T ss_pred CCCEEEEEEecc
Confidence 999999999863
No 57
>2e9g_A AP-1 complex subunit gamma-2; beta-sandwich, immunoglobulin-like fold, adaptin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.59 E-value=55 Score=22.96 Aligned_cols=68 Identities=13% Similarity=0.110 Sum_probs=36.0
Q ss_pred eEEEEEEEcCCCC-eEEEEEEeCCCC--cEEEeCCce-EeCCCCe--EEEEEEecccccCCCCCCCCCeEEEEEEEcC
Q 031157 24 SSCSMQLTNKTDK-FVAFKVKTTNPK--KYCVRPNTG-IILPRTS--CAVTVTMQAQKEAPPDFQCKDKFLLLSVVAP 95 (165)
Q Consensus 24 ~~~~l~L~N~s~~-~vaFKVKTT~p~--~Y~VkP~~G-vI~Pg~s--~~I~Itl~~~~~~p~~~~~~dkFlVq~~~~~ 95 (165)
..-.++.+|.+.. -=-|.+.--.|+ +-.+.|..| .|.|+.. ++-.+.+.... ....+=|+.|.+..-+
T Consensus 40 ~~i~~~~~N~s~~~it~f~fQaAVPK~~kLqL~p~Sg~~l~p~~~~~ItQ~~~i~n~~----~~~l~lR~klsY~~~g 113 (131)
T 2e9g_A 40 LLITITATNFSEGDVTHFICQAAVPKSLQLQLQAPSGNTVPARGGLPITQLFRILNPN----KAPLRLKLRLTYDHFH 113 (131)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEECCTTSCCEECCCSCSEECTTTCCCBCCCEEEECTT----CCCCCEEEEEEEECSS
T ss_pred EEEEEEEEECCCCccccEEEEEEcCcccEEEeeCCCCCCcCCCCCCCEEEEEEEeCCC----CCCEEEEEEEEEEECC
Confidence 5556788898764 334555554555 555667666 5888543 22222222111 1124567777776544
No 58
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=22.17 E-value=84 Score=21.47 Aligned_cols=62 Identities=15% Similarity=0.306 Sum_probs=35.4
Q ss_pred EeCCeeEEeccCCCceEEEEEEEcCCCCeEEEE-------------EEeCCCCcEEEeCCce---EeCCCCeEEEEEEec
Q 031157 9 IQPSELKFPFELKKQSSCSMQLTNKTDKFVAFK-------------VKTTNPKKYCVRPNTG---IILPRTSCAVTVTMQ 72 (165)
Q Consensus 9 i~P~eL~F~~~~~~~~~~~l~L~N~s~~~vaFK-------------VKTT~p~~Y~VkP~~G---vI~Pg~s~~I~Itl~ 72 (165)
+.+.+|.++.- .....|+++|+++++|--- ..=....-|+..=+.| -.+||++.+|...--
T Consensus 8 ~~~g~I~lN~g---r~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~r~V~LV~~ 84 (101)
T 4ep8_B 8 VKPGQIALNTG---RATCRVVVENHGDRPIQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVELVAF 84 (101)
T ss_dssp CCCSEEECSTT---CCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEECTTCEEEEEEEEC
T ss_pred cCCCcEEEcCC---CCEEEEEEEeCCCcceEEccccChhHcCcceeecHhhccCceecccCCCeEeeCCCCeEEEEEEEc
Confidence 44556776642 4567899999999998421 1111222344443333 357777777666544
Q ss_pred c
Q 031157 73 A 73 (165)
Q Consensus 73 ~ 73 (165)
.
T Consensus 85 ~ 85 (101)
T 4ep8_B 85 A 85 (101)
T ss_dssp C
T ss_pred c
Confidence 3
No 59
>1p4u_A ADP-ribosylation factor binding protein GGA3; protein transport; 2.20A {Homo sapiens} SCOP: b.1.10.2 PDB: 1om9_A 1na8_A 2dwy_A 2dwx_A
Probab=21.89 E-value=2e+02 Score=20.64 Aligned_cols=79 Identities=10% Similarity=0.206 Sum_probs=41.3
Q ss_pred EEEEEcCCCC-eEEEEEEeCCCCc--EEEeCCce-EeCCCCe------EEEEEEecccccCCCCCCCCCeEEEEEEEcCC
Q 031157 27 SMQLTNKTDK-FVAFKVKTTNPKK--YCVRPNTG-IILPRTS------CAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPD 96 (165)
Q Consensus 27 ~l~L~N~s~~-~vaFKVKTT~p~~--Y~VkP~~G-vI~Pg~s------~~I~Itl~~~~~~p~~~~~~dkFlVq~~~~~~ 96 (165)
.++.+|.+.. -=-|.++.-.|+- -.+.|..| .|.|+.. ++-.+.+..... ...+=|+.|.|..-++
T Consensus 58 ~~~~~N~s~~~is~f~fQaAVPK~~kLqL~ppSg~~L~p~~~~~~~~~ItQ~m~v~n~~~----~~l~LR~klsY~~~g~ 133 (153)
T 1p4u_A 58 VVSMLNMAPLPVKSIVLQAAAPKSMKVKLQPPSGTELSPFSPIQPPAAITQVMLLANPLK----EKVRLRYKLTFALGEQ 133 (153)
T ss_dssp EEEEEECSSSCBEEEEEEEECBTTSEEEECCCSCSCBCCCBTTBCCCEEEEEEEEECTTC----CCCCEEEEEEEEETTE
T ss_pred EEEEEeCCCCccccEEEEEEcCcccEEEeeCCCCCccCCCCcCCCCCCEEEEEEEeCCCC----CCEEEEEEEEEEECCe
Confidence 6677788763 3345555555554 44556656 4777553 443443332211 1346677777776543
Q ss_pred CC----Ccccccc-cccc
Q 031157 97 GA----TAKDIGP-DMFT 109 (165)
Q Consensus 97 ~~----~~~d~~~-~~f~ 109 (165)
.. +..+++. .+|.
T Consensus 134 ~~~E~~~v~~fP~~~~~~ 151 (153)
T 1p4u_A 134 LSTEVGEVDQFPPVEQWG 151 (153)
T ss_dssp EEEEEEEECCCCCGGGTT
T ss_pred EEEEEEEECCCCChhhhc
Confidence 21 2335564 5665
No 60
>3kyd_D Small ubiquitin-related modifier 1; SUMO, thioester, adenylation, inhibitor, TETR intermediate, ligase, nucleus, phosphoprotein; HET: VMX; 2.61A {Homo sapiens} SCOP: d.15.1.1
Probab=21.43 E-value=97 Score=21.45 Aligned_cols=24 Identities=21% Similarity=0.304 Sum_probs=17.9
Q ss_pred eEEEEEEEcCCCCeEEEEEEeCCC
Q 031157 24 SSCSMQLTNKTDKFVAFKVKTTNP 47 (165)
Q Consensus 24 ~~~~l~L~N~s~~~vaFKVKTT~p 47 (165)
..-+|+|.......|.||||-+.+
T Consensus 39 ~~I~LKV~~qdg~ev~fkIk~tt~ 62 (115)
T 3kyd_D 39 EYIKLKVIGQDSSEIHFKVKMTTH 62 (115)
T ss_dssp CEEEEEEECTTSCEEEEEEETTSC
T ss_pred CeEEEEEEcCCCCEEEEEEccCCh
Confidence 355777777777778888887765
No 61
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=21.25 E-value=41 Score=23.52 Aligned_cols=64 Identities=9% Similarity=0.125 Sum_probs=36.0
Q ss_pred cEEEeCCeeEEeccCCCceEEEEEEEcCCCCe-----EEEEEEeCCC--------------CcEEE--eC----CceEeC
Q 031157 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKF-----VAFKVKTTNP--------------KKYCV--RP----NTGIIL 60 (165)
Q Consensus 6 lL~i~P~eL~F~~~~~~~~~~~l~L~N~s~~~-----vaFKVKTT~p--------------~~Y~V--kP----~~GvI~ 60 (165)
-+.++|.+|....- ...-.|+++|.+.-+ --|-|-.... ..|.- .+ ...+|.
T Consensus 12 ~m~F~p~~i~V~~G---~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~ 88 (129)
T 1cuo_A 12 TMTYSTRSISVPAS---CAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIG 88 (129)
T ss_dssp SSCCSCSEEEEETT---CSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBC
T ss_pred CceEccCeEEEcCC---CeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEEC
Confidence 34566777665531 135579999998642 3344433220 01100 01 135789
Q ss_pred CCCeEEEEEEec
Q 031157 61 PRTSCAVTVTMQ 72 (165)
Q Consensus 61 Pg~s~~I~Itl~ 72 (165)
||++..|.++..
T Consensus 89 pGet~svtf~~~ 100 (129)
T 1cuo_A 89 GGEKTSVKFKVS 100 (129)
T ss_dssp TTCEEEEEEEGG
T ss_pred CCCEEEEEEecc
Confidence 999999999863
No 62
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=20.32 E-value=1.7e+02 Score=26.56 Aligned_cols=61 Identities=13% Similarity=0.134 Sum_probs=42.5
Q ss_pred eeEEecc--CCCceEEEEEEEcCCC---CeEEEEEEeCCCCc--EEEeCCc-eEeCCCCeEEEEEEecccc
Q 031157 13 ELKFPFE--LKKQSSCSMQLTNKTD---KFVAFKVKTTNPKK--YCVRPNT-GIILPRTSCAVTVTMQAQK 75 (165)
Q Consensus 13 eL~F~~~--~~~~~~~~l~L~N~s~---~~vaFKVKTT~p~~--Y~VkP~~-GvI~Pg~s~~I~Itl~~~~ 75 (165)
.|..... -++...+.++++|+-. ..+.|.|--..=.+ -.++ . |-|.||+++.+.+.+.|..
T Consensus 590 ~I~v~g~~~v~~~~~v~v~f~NPL~~~L~~c~~~vEG~GL~~~~~~~~--~~~~v~pg~~~~~~~~~~P~~ 658 (687)
T 2q3z_A 590 KIRILGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVE--IPDPVEAGEEVKVRMDLVPLH 658 (687)
T ss_dssp EEEEESCCSSSSCEEEEEEEECCSSSCBCSEEEEEECTTTCSSCEEEE--ECSCBCTTCEEEEEEEECCCS
T ss_pred EEEeCCCcccCCeEEEEEEEECCCCCcccceEEEEECCCCCCCceEEe--cCCCcCCCCEEEEEEEEEecc
Confidence 3444432 3577889999999976 56688887654221 2222 3 6699999999999999863
Done!