Query 031162
Match_columns 164
No_of_seqs 16 out of 18
Neff 2.2
Searched_HMMs 13730
Date Mon Mar 25 16:03:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031162.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031162hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2vgna1 b.38.4.1 (A:1-135) Dom 33.2 24 0.0017 24.6 4.1 42 69-110 71-123 (135)
2 d1lshb_ f.7.1.1 (B:) Lipovitel 30.9 17 0.0012 27.1 3.1 85 32-133 16-102 (174)
3 d3cnwa1 d.129.3.8 (A:3-140) Un 22.5 82 0.006 19.7 5.1 40 39-78 70-113 (138)
4 d1e2wa2 b.84.2.2 (A:169-232) C 20.9 55 0.004 19.9 3.7 49 45-96 2-50 (64)
5 d1o6aa_ b.139.1.1 (A:) Putativ 20.9 5.1 0.00037 25.5 -1.4 24 74-97 11-34 (87)
6 d2fug71 d.82.2.2 (7:3-129) NAD 18.7 23 0.0017 25.7 1.6 32 56-90 79-110 (127)
7 d1wdja_ c.52.1.27 (A:) Hypothe 14.7 46 0.0034 22.7 2.5 40 70-129 142-182 (186)
8 d1rp1a1 b.12.1.2 (A:337-449) P 14.7 96 0.007 19.8 4.0 37 71-109 39-75 (113)
9 d2i9xa1 d.366.1.1 (A:1-84) Put 11.8 25 0.0018 23.2 0.2 17 64-80 53-69 (84)
10 d1sv6a_ d.177.1.1 (A:) 2-keto- 11.7 34 0.0025 24.1 0.9 33 10-42 32-64 (261)
No 1
>d2vgna1 b.38.4.1 (A:1-135) Dom34 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=33.19 E-value=24 Score=24.58 Aligned_cols=42 Identities=14% Similarity=0.254 Sum_probs=34.3
Q ss_pred eEEEeecCCceeEEee-----------cccceeeeeeeeecceeeeeccccce
Q 031162 69 KFIYEPIHQDVRILSK-----------KIPVTKFLNLQVGIGHNFQLHATGWK 110 (164)
Q Consensus 69 K~iyEP~~~DvrilsK-----------KIPv~~fLnlQvGIGH~F~~~~tGWk 110 (164)
+..|.|....+||--+ .+|+|+|-.|.+.+|..|..-...|.
T Consensus 71 ~~ef~~~~~~LRi~G~iv~e~~~~~n~~v~~Gs~HTl~v~~~~~itI~K~~Wd 123 (135)
T d2vgna1 71 SEDFDMKDEYLKYKGVTVTDESGASNVDIPVGKYLSFTLDYVYPFTIIKQNFN 123 (135)
T ss_dssp EEEEETTTTEEEEEEEECCCTTSSSSTTCCTTCEEEEECCSSSCEEEEESCCC
T ss_pred EEEeecCCCEEEEeeeEEecccccccccccccCcEEEEEcCCCeEEEEECCCC
Confidence 4567777777887654 58899999999999999999877775
No 2
>d1lshb_ f.7.1.1 (B:) Lipovitellin-phosvitin complex; beta-sheet shell regions {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]}
Probab=30.87 E-value=17 Score=27.14 Aligned_cols=85 Identities=21% Similarity=0.290 Sum_probs=53.1
Q ss_pred eeecceEEEeeeEEecCCCcc-eeeEEEeecCCCCCCceEEEeecCCceeEEee-cccceeeeeeeeecceeeeeccccc
Q 031162 32 KEIEGFRVGVNLEFYNAPVNE-YQAKIILKPLSPNRPWKFIYEPIHQDVRILSK-KIPVTKFLNLQVGIGHNFQLHATGW 109 (164)
Q Consensus 32 kevqG~rvG~NfEf~n~~~nd-~~aKlVlKPl~~~~kWK~iyEP~~~DvrilsK-KIPv~~fLnlQvGIGH~F~~~~tGW 109 (164)
+..||+|+.+=++ -+++. -++.+++..++++..||.- -|--++|| |.- --++-|-+-|.-.+-
T Consensus 16 ~k~~GYQ~a~Y~d---~~~~~~~rvQiIvs~l~e~~nWK~C-----aD~~lls~hKv~------Aki~WG~eCq~Y~~~- 80 (174)
T d1lshb_ 16 GKQQGLQTTLYYG---LTSNGLPKAKIVAVELSDLSVWKLC-----AKFRLSAHMKAK------AAIGWGKNCQQYRAM- 80 (174)
T ss_dssp CCCCEEEEEEEEE---CHHHHCCEEEEEEEESCTTCCCEEE-----EEEECCSSSEEE------EEEEESSSSCSEEEE-
T ss_pred CCccceEEEEEec---CCccCccceEEEEEEecCCCCeeEE-----eeeeccccccee------EEEeccccccceeEE-
Confidence 6789999988655 33443 3789999999999999964 36677775 321 123444433332221
Q ss_pred eeEEeeeeccccccCcccceeeee
Q 031162 110 KWKLTTCLVEMEYPGSGIRHLWAC 133 (164)
Q Consensus 110 kWKltt~lG~~ifPG~d~r~gW~a 133 (164)
=+.+|-+= +-.|-..+++.|.-
T Consensus 81 -~~aeTG~~-g~~PA~r~kv~W~r 102 (174)
T d1lshb_ 81 -LEASTGNL-QSHPAARVDIKWGR 102 (174)
T ss_dssp -EEEEEEES-SSSEEEEEEEEECC
T ss_pred -EEEeeccc-CCCcceEEEEeccc
Confidence 11223221 46888899999975
No 3
>d3cnwa1 d.129.3.8 (A:3-140) Uncharacterized protein XoxI {Bacillus cereus [TaxId: 1396]}
Probab=22.46 E-value=82 Score=19.74 Aligned_cols=40 Identities=18% Similarity=0.311 Sum_probs=27.8
Q ss_pred EEeeeEEecCCCcceeeEEEeecCCCCC----CceEEEeecCCc
Q 031162 39 VGVNLEFYNAPVNEYQAKIILKPLSPNR----PWKFIYEPIHQD 78 (164)
Q Consensus 39 vG~NfEf~n~~~nd~~aKlVlKPl~~~~----kWK~iyEP~~~D 78 (164)
+...+.--+.|...|.+.+.+.|..... .|...|+|...+
T Consensus 70 ~~y~~~~~~~p~~~~~~~~~l~p~~~g~~t~v~w~~~f~p~~~~ 113 (138)
T d3cnwa1 70 YTYSIMNAPFPVTNYLSTIQVKEGTESNTSLVEWSGTFTPVEVS 113 (138)
T ss_dssp EEEEEEECSSSEEEEEEEEEEEECSSTTCEEEEEEEEEEESSSC
T ss_pred EEEEEecCCCcceeeEEEEEEEECCCCCeEEEEEEEEEecCCCC
Confidence 3333344456778899999999986432 688889886544
No 4
>d1e2wa2 b.84.2.2 (A:169-232) Cytochrome f, small domain {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=20.89 E-value=55 Score=19.94 Aligned_cols=49 Identities=20% Similarity=0.173 Sum_probs=32.7
Q ss_pred EecCCCcceeeEEEeecCCCCCCceEEEeecCCceeEEeecccceeeeeeee
Q 031162 45 FYNAPVNEYQAKIILKPLSPNRPWKFIYEPIHQDVRILSKKIPVTKFLNLQV 96 (164)
Q Consensus 45 f~n~~~nd~~aKlVlKPl~~~~kWK~iyEP~~~DvrilsKKIPv~~fLnlQv 96 (164)
.||++...--.+|..-+- ...+=+++.++.+++.+ +-.||.++-|..+-
T Consensus 2 ~~na~~aG~Vs~I~~~~~-~kg~~~I~I~~~dGe~~--~y~Ip~g~~l~V~e 50 (64)
T d1e2wa2 2 IYNASAAGKIVAITALSE-KKGGFEVSIEKANGEVV--VDKIPAGPDLIVKE 50 (64)
T ss_dssp CCBCSSCEEEEEEEESSS-SSCCEEEEEECTTSCEE--EEEECSSSCBCCCT
T ss_pred eecCcCCEEEEEEEeecc-cCCcEEEEEECCCCCEE--EEEcCCCCeEEECC
Confidence 467777665555533221 23345899999998754 67999998887653
No 5
>d1o6aa_ b.139.1.1 (A:) Putative flagelar motor switch protein FliN {Thermotoga maritima [TaxId: 2336]}
Probab=20.89 E-value=5.1 Score=25.54 Aligned_cols=24 Identities=17% Similarity=0.445 Sum_probs=19.2
Q ss_pred ecCCceeEEeecccceeeeeeeee
Q 031162 74 PIHQDVRILSKKIPVTKFLNLQVG 97 (164)
Q Consensus 74 P~~~DvrilsKKIPv~~fLnlQvG 97 (164)
|..=.+++=+.++|++.+++||+|
T Consensus 11 pv~l~~~Lg~~~l~l~el~~L~~G 34 (87)
T d1o6aa_ 11 PLKVTVELGRTRMTLKRVLEMIHG 34 (87)
T ss_dssp EEEEEEEEEEEEEEHHHHHHCCTT
T ss_pred cEEEEEEEeeeEeeHHHHhCCCCC
Confidence 445567788899999999999965
No 6
>d2fug71 d.82.2.2 (7:3-129) NADH-quinone oxidoreductase subunit 15, Nqo15 {Thermus thermophilus [TaxId: 274]}
Probab=18.70 E-value=23 Score=25.66 Aligned_cols=32 Identities=31% Similarity=0.336 Sum_probs=26.8
Q ss_pred EEEeecCCCCCCceEEEeecCCceeEEeeccccee
Q 031162 56 KIILKPLSPNRPWKFIYEPIHQDVRILSKKIPVTK 90 (164)
Q Consensus 56 KlVlKPl~~~~kWK~iyEP~~~DvrilsKKIPv~~ 90 (164)
.|++.|...--.||..++|-.|= +..|+|+|+
T Consensus 79 ~I~lr~~g~h~h~hlh~~~G~GL---vegKrPfTr 110 (127)
T d2fug71 79 RIGLRLPRAHIHLHAHYEPGKGL---VTGKIPLTK 110 (127)
T ss_dssp CEEEEETTTTEEEEEEEETTTEE---ESSSSBCCH
T ss_pred eeEEecCCchhheeeeecCCCce---eeccCcccH
Confidence 37899999999999999996554 469999986
No 7
>d1wdja_ c.52.1.27 (A:) Hypothetical protein TT1808 (TTHA1514) {Thermus thermophilus [TaxId: 274]}
Probab=14.74 E-value=46 Score=22.65 Aligned_cols=40 Identities=13% Similarity=0.275 Sum_probs=23.3
Q ss_pred EEEeecCCceeEEeecccceeeeeeeeecceeeeeccccceeEEeeee-ccccccCcccce
Q 031162 70 FIYEPIHQDVRILSKKIPVTKFLNLQVGIGHNFQLHATGWKWKLTTCL-VEMEYPGSGIRH 129 (164)
Q Consensus 70 ~iyEP~~~DvrilsKKIPv~~fLnlQvGIGH~F~~~~tGWkWKltt~l-G~~ifPG~d~r~ 129 (164)
.|..|.++-|+|.+.. ..++-..-+.++ |..+||||.+.+
T Consensus 142 wivDp~~~~v~vyr~~--------------------~~~~~~~~~~~l~~~~~lPgf~l~v 182 (186)
T d1wdja_ 142 VLVDPYARAVEVFRPG--------------------KPPLRLEGVERVSLDPELPGFALSL 182 (186)
T ss_dssp EEEETTTTEEEEECTT--------------------SCCEEEESCSEEECTTTSTTCEEEC
T ss_pred EEEecCCCEEEEEECC--------------------CceEEEcCCCEEEcCCcCCCeEEEH
Confidence 4667777777776532 112222223334 568999998765
No 8
>d1rp1a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Dog (Canis familiaris) [TaxId: 9615]}
Probab=14.68 E-value=96 Score=19.84 Aligned_cols=37 Identities=14% Similarity=0.151 Sum_probs=28.5
Q ss_pred EEeecCCceeEEeecccceeeeeeeeecceeeeeccccc
Q 031162 71 IYEPIHQDVRILSKKIPVTKFLNLQVGIGHNFQLHATGW 109 (164)
Q Consensus 71 iyEP~~~DvrilsKKIPv~~fLnlQvGIGH~F~~~~tGW 109 (164)
.+||-+-|.-+++-...+|+...+. |+||-.--..+|
T Consensus 39 ~f~~g~~~~f~i~~~~~lG~l~~v~--i~hdn~g~~~~w 75 (113)
T d1rp1a1 39 ILKPGSTHSNEFDAKLDVGTIEKVK--FLWNNNVVNPTF 75 (113)
T ss_dssp EECTTCEEEEEEEESSCCSSEEEEE--EEEEEC--CTTC
T ss_pred eEcCCCEEEEEEEeCCCCCCcEEEE--EEECCCCCCCcc
Confidence 4899999999999889999988766 668765555556
No 9
>d2i9xa1 d.366.1.1 (A:1-84) Putative septation protein SpoVG {Staphylococcus epidermidis [TaxId: 1282]}
Probab=11.80 E-value=25 Score=23.20 Aligned_cols=17 Identities=35% Similarity=0.712 Sum_probs=14.7
Q ss_pred CCCCceEEEeecCCcee
Q 031162 64 PNRPWKFIYEPIHQDVR 80 (164)
Q Consensus 64 ~~~kWK~iyEP~~~Dvr 80 (164)
++..||-|+.|++.+.|
T Consensus 53 ~~g~y~Di~~Pi~~e~R 69 (84)
T d2i9xa1 53 PDGEFRDIAHPINSDMR 69 (84)
T ss_dssp TTSCEEECEEECSHHHH
T ss_pred CCCCEEEEEEECCHHHH
Confidence 57779999999998876
No 10
>d1sv6a_ d.177.1.1 (A:) 2-keto-4-pentenoate hydratase MhpD {Escherichia coli [TaxId: 562]}
Probab=11.71 E-value=34 Score=24.07 Aligned_cols=33 Identities=15% Similarity=0.247 Sum_probs=23.2
Q ss_pred CCChhhhhcccccchhhhhhhheeecceEEEee
Q 031162 10 PTSWDELYSINLMPSELFLKFRKEIEGFRVGVN 42 (164)
Q Consensus 10 p~sw~ElY~inlmP~El~lKFRkevqG~rvG~N 42 (164)
|.|++|-|.|--.=-++++.--.++-||++|+-
T Consensus 32 ~~~~~~AY~iQ~~~~~~~~~~g~~~~G~Kig~t 64 (261)
T d1sv6a_ 32 IDNAEAAYAIQHINVQHDVAQGRRVVGRKVGLT 64 (261)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTTCCEEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCccccceeecc
Confidence 568999999864323444444468999999973
Done!