Your job contains 1 sequence.
>031164
MAKPKAPRRTLESYTVKSISKTIKPGDCVLMRPSEPSKPSYVAKIERIESDARGANVKVH
VRWYYRPEESIGGRRQFHGSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKLDAVGNDDF
FCRFEYNSSSGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCSDWS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031164
(164 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2120252 - symbol:SHL1 "short life" species:370... 715 1.3e-70 1
TAIR|locus:2120693 - symbol:EBS "EARLY BOLTING IN SHORT D... 669 9.4e-66 1
TAIR|locus:2137256 - symbol:AT4G04260 species:3702 "Arabi... 472 7.1e-45 1
UNIPROTKB|F1NFN2 - symbol:BAHD1 "Uncharacterized protein"... 158 1.0e-10 1
UNIPROTKB|F1PKB9 - symbol:BAHD1 "Uncharacterized protein"... 156 3.7e-10 1
UNIPROTKB|F1M074 - symbol:F1M074 "Uncharacterized protein... 153 1.2e-09 1
MGI|MGI:2139371 - symbol:Bahd1 "bromo adjacent homology d... 149 2.0e-09 1
RGD|1563127 - symbol:Bahd1 "bromo adjacent homology domai... 149 2.0e-09 1
UNIPROTKB|F1SSR6 - symbol:BAHD1 "Uncharacterized protein"... 149 2.1e-09 1
UNIPROTKB|F1MSG4 - symbol:BAHD1 "Uncharacterized protein"... 149 2.1e-09 1
UNIPROTKB|Q8TBE0 - symbol:BAHD1 "Bromo adjacent homology ... 149 2.1e-09 1
UNIPROTKB|I3L2T4 - symbol:BAHCC1 "BAH and coiled-coil dom... 154 2.5e-09 1
UNIPROTKB|F8WBW8 - symbol:BAHCC1 "BAH and coiled-coil dom... 154 2.5e-09 1
UNIPROTKB|Q9P281 - symbol:BAHCC1 "BAH and coiled-coil dom... 154 2.5e-09 1
UNIPROTKB|F1MM81 - symbol:F1MM81 "Uncharacterized protein... 153 3.0e-09 1
MGI|MGI:2679272 - symbol:Bahcc1 "BAH domain and coiled-co... 153 3.3e-09 1
FB|FBgn0052529 - symbol:Hers "Histone gene-specific Epige... 151 5.1e-09 1
UNIPROTKB|I3LCT7 - symbol:BAHCC1 "Uncharacterized protein... 148 1.1e-08 1
UNIPROTKB|I3L5Y2 - symbol:BAHCC1 "Uncharacterized protein... 148 1.1e-08 1
UNIPROTKB|J9P091 - symbol:BAHCC1 "Uncharacterized protein... 147 1.2e-08 1
UNIPROTKB|F1PQM0 - symbol:BAHCC1 "Uncharacterized protein... 147 1.4e-08 1
TAIR|locus:2121601 - symbol:AT4G23120 species:3702 "Arabi... 135 1.9e-08 1
FB|FBgn0051151 - symbol:wge "winged eye" species:7227 "Dr... 143 2.3e-08 1
UNIPROTKB|E2RRR3 - symbol:PBRM1 "Uncharacterized protein"... 142 2.9e-08 1
UNIPROTKB|E2RRL7 - symbol:PBRM1 "Uncharacterized protein"... 142 3.0e-08 1
UNIPROTKB|H0Y5B5 - symbol:PBRM1 "Protein polybromo-1" spe... 139 3.7e-08 1
UNIPROTKB|E1BNH8 - symbol:E1BNH8 "Uncharacterized protein... 141 3.7e-08 1
RGD|1565549 - symbol:Pbrm1 "polybromo 1" species:10116 "R... 141 3.8e-08 1
SGD|S000003288 - symbol:RSC1 "Component of the RSC chroma... 138 3.9e-08 1
UNIPROTKB|E7EVG2 - symbol:PBRM1 "Protein polybromo-1" spe... 139 5.2e-08 1
MGI|MGI:1923998 - symbol:Pbrm1 "polybromo 1" species:1009... 139 6.0e-08 1
ZFIN|ZDB-GENE-010501-3 - symbol:pbrm1l "polybromo 1, like... 139 6.0e-08 1
UNIPROTKB|Q86U86 - symbol:PBRM1 "Protein polybromo-1" spe... 139 6.2e-08 1
WB|WBGene00007042 - symbol:pbrm-1 species:6239 "Caenorhab... 137 1.1e-07 1
UNIPROTKB|F1NLL8 - symbol:PBRM1 "Protein polybromo-1" spe... 136 1.2e-07 1
UNIPROTKB|Q90941 - symbol:PBRM1 "Protein polybromo-1" spe... 136 1.2e-07 1
TAIR|locus:2130090 - symbol:ORC1A "origin recognition com... 132 1.4e-07 1
SGD|S000004349 - symbol:RSC2 "Component of the RSC chroma... 130 2.6e-07 1
TAIR|locus:2135575 - symbol:ORC1B "origin of replication ... 127 4.9e-07 1
CGD|CAL0006080 - symbol:orf19.2964 species:5476 "Candida ... 125 7.8e-07 1
TAIR|locus:2123136 - symbol:AT4G11560 species:3702 "Arabi... 121 1.4e-06 1
TAIR|locus:2097134 - symbol:AT3G43990 species:3702 "Arabi... 117 9.8e-06 1
POMBASE|SPBC4B4.03 - symbol:rsc1 "RSC complex subunit Rsc... 115 7.5e-05 1
TAIR|locus:2040209 - symbol:AT2G25120 species:3702 "Arabi... 112 8.2e-05 1
UNIPROTKB|E1BLK1 - symbol:TNRC18 "Uncharacterized protein... 103 0.00039 2
ZFIN|ZDB-GENE-060718-1 - symbol:rerea "arginine-glutamic ... 89 0.00042 2
POMBASE|SPAC3H1.12c - symbol:snt2 "Lid2 complex subunit S... 108 0.00047 2
TAIR|locus:2162117 - symbol:AT5G55600 species:3702 "Arabi... 108 0.00070 1
UNIPROTKB|J9NYK8 - symbol:TNRC18 "Uncharacterized protein... 103 0.00071 2
UNIPROTKB|B0QZZ2 - symbol:PHF8 "Histone lysine demethylas... 86 0.00080 1
UNIPROTKB|B0QZZ4 - symbol:PHF8 "Histone lysine demethylas... 86 0.00080 1
UNIPROTKB|Q5JPR8 - symbol:PHF8 "Histone lysine demethylas... 86 0.00080 1
UNIPROTKB|K7GQN1 - symbol:PHF8 "Uncharacterized protein" ... 86 0.00080 1
UNIPROTKB|F1PWZ6 - symbol:TNRC18 "Uncharacterized protein... 103 0.00086 2
UNIPROTKB|J9P0Q6 - symbol:TNRC18 "Uncharacterized protein... 103 0.00092 2
UNIPROTKB|Q92072 - symbol:DNMT1 "DNA (cytosine-5)-methylt... 110 0.00095 1
>TAIR|locus:2120252 [details] [associations]
symbol:SHL1 "short life" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006333 "chromatin assembly or disassembly"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0006833 "water transport" evidence=RCA] [GO:0006972
"hyperosmotic response" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009266 "response to temperature
stimulus" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=RCA] [GO:0046686 "response to cadmium ion" evidence=RCA]
[GO:0048767 "root hair elongation" evidence=RCA] InterPro:IPR001025
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01426
PROSITE:PS50016 PROSITE:PS51038 SMART:SM00249 SMART:SM00439
GO:GO:0005634 EMBL:CP002687 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0009791 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AF277453 EMBL:AY050934
EMBL:AY079396 IPI:IPI00526215 RefSeq:NP_568053.1 UniGene:At.47993
UniGene:At.70103 ProteinModelPortal:Q9FEN9 SMR:Q9FEN9 IntAct:Q9FEN9
STRING:Q9FEN9 PRIDE:Q9FEN9 EnsemblPlants:AT4G39100.1 GeneID:830065
KEGG:ath:AT4G39100 TAIR:At4g39100 InParanoid:Q9FEN9 OMA:YDVQSAD
PhylomeDB:Q9FEN9 ProtClustDB:CLSN2689831 Genevestigator:Q9FEN9
Uniprot:Q9FEN9
Length = 228
Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
Identities = 127/163 (77%), Positives = 145/163 (88%)
Query: 1 MAKPKAPRRTLESYTVKSISKTIKPGDCVLMRPSEPSKPSYVAKIERIESDARGANVKVH 60
M K KAPR+ L+SY +K I+K+I+ GD VLMR SEP KPSYVA++E IE+DARG++ KV
Sbjct: 1 MPKQKAPRKQLKSYKLKHINKSIQEGDAVLMRSSEPGKPSYVARVEAIETDARGSHAKVR 60
Query: 61 VRWYYRPEESIGGRRQFHGSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKLDAVGNDDF 120
VRWYYRPEESIGGRRQFHG+KEVFLSDH D QSADTIEGKC VHSF SYTKLD+VGNDDF
Sbjct: 61 VRWYYRPEESIGGRRQFHGAKEVFLSDHFDFQSADTIEGKCKVHSFSSYTKLDSVGNDDF 120
Query: 121 FCRFEYNSSSGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCSDW 163
FCRFEYNS++GAF+PDRV V+CKCEMPYNPDDLMVQCE CS+W
Sbjct: 121 FCRFEYNSTTGAFDPDRVTVFCKCEMPYNPDDLMVQCEECSEW 163
>TAIR|locus:2120693 [details] [associations]
symbol:EBS "EARLY BOLTING IN SHORT DAYS" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009845 "seed germination" evidence=IMP]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0006333 "chromatin assembly or disassembly"
evidence=RCA] InterPro:IPR001025 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01426 PROSITE:PS50016
PROSITE:PS51038 SMART:SM00249 SMART:SM00439 EMBL:CP002687
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0009845
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0009911 InterPro:IPR019786 PROSITE:PS01359
IPI:IPI00541104 RefSeq:NP_193945.2 UniGene:At.49737
ProteinModelPortal:F4JL28 SMR:F4JL28 PRIDE:F4JL28
EnsemblPlants:AT4G22140.1 GeneID:828303 KEGG:ath:AT4G22140
OMA:NQPYVAR Uniprot:F4JL28
Length = 234
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 114/162 (70%), Positives = 140/162 (86%)
Query: 2 AKPKAPRRTLESYTVKSISKTIKPGDCVLMRPSEPSKPSYVAKIERIESDARGANVKVHV 61
+K K R+ L+SYT+K +K ++ GDCVLMRPS+ KP YVA++E+IE+DAR NVKVH
Sbjct: 10 SKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARN-NVKVHC 68
Query: 62 RWYYRPEESIGGRRQFHGSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKLDAVGNDDFF 121
RWYYRPEES+GGRRQFHG+KE+FLSDH D+QSA TIEGKC VH+FK+YT+L+ VG +D++
Sbjct: 69 RWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLENVGAEDYY 128
Query: 122 CRFEYNSSSGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCSDW 163
CRFEY +++GAF PDRVAVYCKCEMPYNPDDLMVQCEGC DW
Sbjct: 129 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDW 170
>TAIR|locus:2137256 [details] [associations]
symbol:AT4G04260 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006333 "chromatin assembly or disassembly"
evidence=RCA] InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038
SMART:SM00439 EMBL:CP002687 GO:GO:0003677 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
IPI:IPI00527780 RefSeq:NP_192335.2 UniGene:At.54133
ProteinModelPortal:F4JGB7 SMR:F4JGB7 EnsemblPlants:AT4G04260.1
GeneID:825742 KEGG:ath:AT4G04260 Uniprot:F4JGB7
Length = 193
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 84/124 (67%), Positives = 104/124 (83%)
Query: 31 MRPSEPSKPSYVAKIERIESDARGANVKVHVRWYYRPEESIGGRRQFHGSKEVFLSDHHD 90
MRPS+ K YVA++E+IE+DAR NVKVH RWYY PEES GGRRQ HG+KE+FLSDH D
Sbjct: 1 MRPSDAGKAPYVARVEKIEADARN-NVKVHCRWYYCPEESHGGRRQLHGAKELFLSDHFD 59
Query: 91 IQSADTIEGKCTVHSFKSYTKLDAVGNDDFFCRFEYNSSSGAFNPDRVAVYCKCEMPYNP 150
+QSA TIEGKC VH+FK+YT+L+ VG +D++C F+Y +++GAF PDRVAVY KCEMPYN
Sbjct: 60 VQSAHTIEGKCIVHTFKNYTRLENVGVEDYYCIFDYKAATGAFTPDRVAVYYKCEMPYNS 119
Query: 151 DDLM 154
D+LM
Sbjct: 120 DELM 123
>UNIPROTKB|F1NFN2 [details] [associations]
symbol:BAHD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005677 "chromatin silencing
complex" evidence=IEA] [GO:0031507 "heterochromatin assembly"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001025 Pfam:PF01426
PROSITE:PS51038 SMART:SM00439 GO:GO:0045892 GO:GO:0003677
GO:GO:0003682 GO:GO:0005677 GO:GO:0031507
GeneTree:ENSGT00390000003967 EMBL:AADN02040035 EMBL:AADN02040036
EMBL:AADN02040037 EMBL:AADN02040038 EMBL:AADN02040039
IPI:IPI00582870 Ensembl:ENSGALT00000007423 OMA:HQNEIFA
Uniprot:F1NFN2
Length = 473
Score = 158 (60.7 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 40/107 (37%), Positives = 56/107 (52%)
Query: 12 ESY-TVKSISKTIKPGDCVLMRPSEPSKPS--YVAKIERIESDARGANVKVHVRWYYRPE 68
+SY V+ + I+ D VL++ S P K S YVAKI + D + + + + WYYRPE
Sbjct: 310 KSYQAVERDGEIIRVRDTVLLK-SGPRKKSMPYVAKISALWEDPKTGELMMSLLWYYRPE 368
Query: 69 ESIGGRRQFHGSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKLDAV 115
+ GGR E+F S H D S IE KC V +F Y + A+
Sbjct: 369 HTQGGRNPSMHQNEIFASRHQDENSVACIEEKCYVLTFAEYCRFCAL 415
>UNIPROTKB|F1PKB9 [details] [associations]
symbol:BAHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0031507
"heterochromatin assembly" evidence=IEA] [GO:0005677 "chromatin
silencing complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038 SMART:SM00439
GO:GO:0045892 GO:GO:0003677 GO:GO:0003682 OMA:RACPQSA GO:GO:0005677
GO:GO:0031507 GeneTree:ENSGT00390000003967 EMBL:AAEX03016066
Ensembl:ENSCAFT00000014534 Uniprot:F1PKB9
Length = 776
Score = 156 (60.0 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 41/107 (38%), Positives = 55/107 (51%)
Query: 12 ESY-TVKSISKTIKPGDCVLMRPSEPSKPS--YVAKIERIESDARGANVKVHVRWYYRPE 68
+SY V+ +TI+ D VL++ S P K S YVAKI + + + + + WYYRPE
Sbjct: 613 KSYQAVERHGETIRVRDTVLLK-SGPRKTSTPYVAKISALWENPESGELMMSLLWYYRPE 671
Query: 69 ESIGGRRQFHGSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKLDAV 115
GGR EVF S H D S IE KC V +F Y + A+
Sbjct: 672 HLQGGRSPSMHENEVFASRHQDQNSVACIEEKCYVLTFAEYCRFCAM 718
>UNIPROTKB|F1M074 [details] [associations]
symbol:F1M074 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038 SMART:SM00439
GO:GO:0003677 IPI:IPI00764269 Ensembl:ENSRNOT00000054977
Uniprot:F1M074
Length = 1123
Score = 153 (58.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 37/111 (33%), Positives = 60/111 (54%)
Query: 3 KPKAPRRTLESYTVKSISKTIKPGDC-VLMRPSEPSKPSYVAKIERIESDARGANVKVHV 61
K KA R+ V+ +T++ GDC V + P+ P Y+ +IE + ++ G+N+ V V
Sbjct: 981 KGKA-RKLFYKAIVRG-KETLRIGDCAVFLSAGRPNLP-YIGRIESLW-ESWGSNMVVKV 1036
Query: 62 RWYYRPEESIGGRRQFHGSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKL 112
+W+Y PEE+ G+RQ G ++ S H D TI KC V + Y ++
Sbjct: 1037 KWFYHPEETKLGKRQSDGKNALYQSCHEDENDVQTISHKCQVVGREQYEQM 1087
>MGI|MGI:2139371 [details] [associations]
symbol:Bahd1 "bromo adjacent homology domain containing 1"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005677 "chromatin
silencing complex" evidence=ISO] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0031507 "heterochromatin assembly" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038
SMART:SM00439 MGI:MGI:2139371 GO:GO:0045892 GO:GO:0005694
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 EMBL:CH466519 CTD:22893
eggNOG:NOG299910 HOVERGEN:HBG106654 OrthoDB:EOG4NS3B0 GO:GO:0005677
GO:GO:0031507 EMBL:AK129243 EMBL:AL845164 EMBL:BC047433
EMBL:BC100358 EMBL:BC141046 EMBL:BC145233 IPI:IPI00420548
IPI:IPI00857199 RefSeq:NP_001038988.1 UniGene:Mm.330487
ProteinModelPortal:Q497V6 SMR:Q497V6 STRING:Q497V6
PhosphoSite:Q497V6 PRIDE:Q497V6 Ensembl:ENSMUST00000036578
Ensembl:ENSMUST00000151162 GeneID:228536 KEGG:mmu:228536
UCSC:uc008lsw.1 UCSC:uc012cbm.1 GeneTree:ENSGT00390000003967
InParanoid:B2RUB2 NextBio:379020 Bgee:Q497V6 CleanEx:MM_BAHD1
Genevestigator:Q497V6 Uniprot:Q497V6
Length = 772
Score = 149 (57.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 42/110 (38%), Positives = 56/110 (50%)
Query: 12 ESY-TVKSISKTIKPGDCVLMRPSEPSKPS--YVAKIERIESDARGANVKVHVRWYYRPE 68
+SY V+ +TI+ D VL++ S P K S YVAKI + + + + + WYYRPE
Sbjct: 606 KSYQAVERHGETIRVRDTVLLK-SGPRKTSTPYVAKISALWENPESGELMMSLLWYYRPE 664
Query: 69 ESIGGRR-QFHG--SKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKLDAV 115
GGR H EVF S H D S IE KC V +F Y + A+
Sbjct: 665 HLQGGRSPSMHEPLQNEVFASRHQDQNSVACIEEKCYVLTFAEYCRFCAM 714
>RGD|1563127 [details] [associations]
symbol:Bahd1 "bromo adjacent homology domain containing 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0005677 "chromatin silencing complex" evidence=IEA;ISO]
[GO:0031507 "heterochromatin assembly" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038
SMART:SM00439 RGD:1563127 GO:GO:0045892 GO:GO:0003677 GO:GO:0003682
CTD:22893 OMA:RACPQSA OrthoDB:EOG4NS3B0 GO:GO:0005677 GO:GO:0031507
GeneTree:ENSGT00390000003967 EMBL:CH473949 IPI:IPI00369875
RefSeq:XP_001080776.3 RefSeq:XP_347036.5 Ensembl:ENSRNOT00000013878
GeneID:362194 KEGG:rno:362194 UCSC:RGD:1563127 NextBio:678978
Uniprot:D3ZHT3
Length = 772
Score = 149 (57.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 42/110 (38%), Positives = 56/110 (50%)
Query: 12 ESY-TVKSISKTIKPGDCVLMRPSEPSKPS--YVAKIERIESDARGANVKVHVRWYYRPE 68
+SY V+ +TI+ D VL++ S P K S YVAKI + + + + + WYYRPE
Sbjct: 606 KSYQAVERHGETIRVRDTVLLK-SGPRKTSTPYVAKISALWENPESGELMMSLLWYYRPE 664
Query: 69 ESIGGRR-QFHG--SKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKLDAV 115
GGR H EVF S H D S IE KC V +F Y + A+
Sbjct: 665 HLQGGRSPSMHEPLQNEVFASRHQDQNSVACIEEKCYVLTFAEYCRFCAM 714
>UNIPROTKB|F1SSR6 [details] [associations]
symbol:BAHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031507 "heterochromatin assembly"
evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001025
Pfam:PF01426 PROSITE:PS51038 SMART:SM00439 GO:GO:0045892
GO:GO:0003677 GO:GO:0003682 CTD:22893 OMA:RACPQSA GO:GO:0005677
GO:GO:0031507 GeneTree:ENSGT00390000003967 EMBL:CU234165
RefSeq:XP_003353440.1 Ensembl:ENSSSCT00000005271 GeneID:100155635
KEGG:ssc:100155635 Uniprot:F1SSR6
Length = 778
Score = 149 (57.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 42/110 (38%), Positives = 56/110 (50%)
Query: 12 ESY-TVKSISKTIKPGDCVLMRPSEPSKPS--YVAKIERIESDARGANVKVHVRWYYRPE 68
+SY V+ +TI+ D VL++ S P K S YVAKI + + + + + WYYRPE
Sbjct: 612 KSYQAVERHGETIRVRDTVLLK-SGPRKTSTPYVAKISALWENPESGELMMSLLWYYRPE 670
Query: 69 ESIGGRR-QFHG--SKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKLDAV 115
GGR H EVF S H D S IE KC V +F Y + A+
Sbjct: 671 HLQGGRSPSMHEPLQNEVFASRHQDQNSVACIEEKCYVLTFAEYCRFCAM 720
>UNIPROTKB|F1MSG4 [details] [associations]
symbol:BAHD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031507 "heterochromatin assembly"
evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001025
Pfam:PF01426 PROSITE:PS51038 SMART:SM00439 GO:GO:0045892
GO:GO:0003677 GO:GO:0003682 CTD:22893 OMA:RACPQSA GO:GO:0005677
GO:GO:0031507 GeneTree:ENSGT00390000003967 EMBL:DAAA02028546
IPI:IPI00688462 RefSeq:NP_001193211.1 UniGene:Bt.21388
Ensembl:ENSBTAT00000005794 GeneID:617684 KEGG:bta:617684
NextBio:20900790 Uniprot:F1MSG4
Length = 779
Score = 149 (57.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 42/110 (38%), Positives = 56/110 (50%)
Query: 12 ESY-TVKSISKTIKPGDCVLMRPSEPSKPS--YVAKIERIESDARGANVKVHVRWYYRPE 68
+SY V+ +TI+ D VL++ S P K S YVAKI + + + + + WYYRPE
Sbjct: 613 KSYQAVERHGETIRVRDTVLLK-SGPRKTSTPYVAKISALWENPESGELMMSLLWYYRPE 671
Query: 69 ESIGGRR-QFHG--SKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKLDAV 115
GGR H EVF S H D S IE KC V +F Y + A+
Sbjct: 672 HLQGGRSPSMHEPLQNEVFASRHQDQNSVACIEEKCYVLTFAEYCRFCAM 721
>UNIPROTKB|Q8TBE0 [details] [associations]
symbol:BAHD1 "Bromo adjacent homology domain-containing 1
protein" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0031507 "heterochromatin assembly" evidence=IMP]
[GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038 SMART:SM00439
GO:GO:0045892 GO:GO:0005694 GO:GO:0003677 GO:GO:0006351
GO:GO:0003682 EMBL:AB023162 EMBL:BC022782 EMBL:AC013356
EMBL:AL833923 IPI:IPI00465088 IPI:IPI00797500 IPI:IPI00848287
RefSeq:NP_055767.3 UniGene:Hs.22109 ProteinModelPortal:Q8TBE0
SMR:Q8TBE0 IntAct:Q8TBE0 MINT:MINT-1463761 STRING:Q8TBE0
PhosphoSite:Q8TBE0 DMDM:152040006 PaxDb:Q8TBE0 PRIDE:Q8TBE0
DNASU:22893 Ensembl:ENST00000416165 Ensembl:ENST00000560846
Ensembl:ENST00000561234 GeneID:22893 KEGG:hsa:22893 UCSC:uc001zlt.2
UCSC:uc001zlu.2 UCSC:uc001zlv.2 CTD:22893 GeneCards:GC15P040733
H-InvDB:HIX0012131 HGNC:HGNC:29153 HPA:HPA040461 HPA:HPA041196
MIM:613880 neXtProt:NX_Q8TBE0 PharmGKB:PA128394592 eggNOG:NOG299910
HOGENOM:HOG000095173 HOVERGEN:HBG106654 InParanoid:Q8TBE0
OMA:RACPQSA OrthoDB:EOG4NS3B0 PhylomeDB:Q8TBE0 GenomeRNAi:22893
NextBio:43507 Bgee:Q8TBE0 CleanEx:HS_BAHD1 Genevestigator:Q8TBE0
GO:GO:0005677 GO:GO:0031507 Uniprot:Q8TBE0
Length = 780
Score = 149 (57.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 42/110 (38%), Positives = 56/110 (50%)
Query: 12 ESY-TVKSISKTIKPGDCVLMRPSEPSKPS--YVAKIERIESDARGANVKVHVRWYYRPE 68
+SY V+ +TI+ D VL++ S P K S YVAKI + + + + + WYYRPE
Sbjct: 614 KSYQAVERHGETIRVRDTVLLK-SGPRKTSTPYVAKISALWENPESGELMMSLLWYYRPE 672
Query: 69 ESIGGRR-QFHG--SKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKLDAV 115
GGR H EVF S H D S IE KC V +F Y + A+
Sbjct: 673 HLQGGRSPSMHEPLQNEVFASRHQDQNSVACIEEKCYVLTFAEYCRFCAM 722
>UNIPROTKB|I3L2T4 [details] [associations]
symbol:BAHCC1 "BAH and coiled-coil domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038
SMART:SM00439 GO:GO:0003677 EMBL:AC110285 EMBL:AC139149
HGNC:HGNC:29279 ChiTaRS:BAHCC1 Ensembl:ENST00000571813
Uniprot:I3L2T4
Length = 2520
Score = 154 (59.3 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 37/111 (33%), Positives = 61/111 (54%)
Query: 3 KPKAPRRTLESYTVKSISKTIKPGDC-VLMRPSEPSKPSYVAKIERIESDARGANVKVHV 61
K KA R+ V+ +T++ GDC V + P+ P Y+ +IE + ++ G+N+ V V
Sbjct: 2378 KGKA-RKLFYKAIVRG-EETLRVGDCAVFLSAGRPNLP-YIGRIESMW-ESWGSNMVVKV 2433
Query: 62 RWYYRPEESIGGRRQFHGSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKL 112
+W+Y PEE+ G+RQ G ++ S H D TI KC V + + Y ++
Sbjct: 2434 KWFYHPEETKLGKRQCDGKNALYQSCHEDENDVQTISHKCQVVAREQYEQM 2484
>UNIPROTKB|F8WBW8 [details] [associations]
symbol:BAHCC1 "BAH and coiled-coil domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038
SMART:SM00439 GO:GO:0003677 EMBL:AC110285 EMBL:AC139149
IPI:IPI00845508 HGNC:HGNC:29279 ChiTaRS:BAHCC1 OMA:LDHHGNS
ProteinModelPortal:F8WBW8 Ensembl:ENST00000307745 UCSC:uc002kae.2
Bgee:F8WBW8 Uniprot:F8WBW8
Length = 2608
Score = 154 (59.3 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 37/111 (33%), Positives = 61/111 (54%)
Query: 3 KPKAPRRTLESYTVKSISKTIKPGDC-VLMRPSEPSKPSYVAKIERIESDARGANVKVHV 61
K KA R+ V+ +T++ GDC V + P+ P Y+ +IE + ++ G+N+ V V
Sbjct: 2466 KGKA-RKLFYKAIVRG-EETLRVGDCAVFLSAGRPNLP-YIGRIESMW-ESWGSNMVVKV 2521
Query: 62 RWYYRPEESIGGRRQFHGSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKL 112
+W+Y PEE+ G+RQ G ++ S H D TI KC V + + Y ++
Sbjct: 2522 KWFYHPEETKLGKRQCDGKNALYQSCHEDENDVQTISHKCQVVAREQYEQM 2572
>UNIPROTKB|Q9P281 [details] [associations]
symbol:BAHCC1 "BAH and coiled-coil domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038
SMART:SM00439 GO:GO:0003677 EMBL:AC110285 EMBL:AC139149
EMBL:AADB02019016 EMBL:AB040880 EMBL:BC033222 IPI:IPI00845508
RefSeq:NP_001073988.2 UniGene:Hs.514580 ProteinModelPortal:Q9P281
SMR:Q9P281 IntAct:Q9P281 PhosphoSite:Q9P281 DMDM:205371795
PaxDb:Q9P281 PRIDE:Q9P281 GeneID:57597 KEGG:hsa:57597
UCSC:uc002kaf.2 CTD:57597 GeneCards:GC17P079373 H-InvDB:HIX0014249
HGNC:HGNC:29279 HPA:HPA023386 neXtProt:NX_Q9P281
PharmGKB:PA128394719 eggNOG:NOG77890 HOGENOM:HOG000095172
HOVERGEN:HBG107492 OrthoDB:EOG4R23SX ChiTaRS:BAHCC1
GenomeRNAi:57597 NextBio:64206 CleanEx:HS_BAHCC1
Genevestigator:Q9P281 Uniprot:Q9P281
Length = 2608
Score = 154 (59.3 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 37/111 (33%), Positives = 61/111 (54%)
Query: 3 KPKAPRRTLESYTVKSISKTIKPGDC-VLMRPSEPSKPSYVAKIERIESDARGANVKVHV 61
K KA R+ V+ +T++ GDC V + P+ P Y+ +IE + ++ G+N+ V V
Sbjct: 2466 KGKA-RKLFYKAIVRG-EETLRVGDCAVFLSAGRPNLP-YIGRIESMW-ESWGSNMVVKV 2521
Query: 62 RWYYRPEESIGGRRQFHGSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKL 112
+W+Y PEE+ G+RQ G ++ S H D TI KC V + + Y ++
Sbjct: 2522 KWFYHPEETKLGKRQCDGKNALYQSCHEDENDVQTISHKCQVVAREQYEQM 2572
>UNIPROTKB|F1MM81 [details] [associations]
symbol:F1MM81 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001025
Pfam:PF01426 PROSITE:PS51038 SMART:SM00439 GO:GO:0003677
GeneTree:ENSGT00530000063602 OMA:LDHHGNS EMBL:DAAA02049425
EMBL:DAAA02049426 EMBL:DAAA02049427 EMBL:DAAA02049428
EMBL:DAAA02049429 IPI:IPI00685286 Ensembl:ENSBTAT00000022317
Uniprot:F1MM81
Length = 2399
Score = 153 (58.9 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 43/147 (29%), Positives = 72/147 (48%)
Query: 3 KPKAPRRTLESYTVKSISKTIKPGDC-VLMRPSEPSKPSYVAKIERIESDARGANVKVHV 61
K KA R+ V+ +T++ GDC V + P+ P Y+ +IE + ++ G+N+ V V
Sbjct: 2257 KGKA-RKLFYKAIVRG-KETLRIGDCAVFLSAGRPNLP-YIGRIESMW-ESWGSNMVVKV 2312
Query: 62 RWYYRPEESIGGRRQFHGSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKLDAVGN---- 117
+W+Y PEE+ G+RQ G ++ S H D TI KC V + Y ++
Sbjct: 2313 KWFYHPEETKLGKRQSDGKNALYQSCHEDENDVQTISHKCQVVGREQYEQMTRSRKYQDR 2372
Query: 118 -DDFFCRFEYNSSSGAF-NPDRVAVYC 142
D ++ Y+ ++G D V + C
Sbjct: 2373 RDLYYLAGTYDPTTGRLVTADGVPILC 2399
>MGI|MGI:2679272 [details] [associations]
symbol:Bahcc1 "BAH domain and coiled-coil containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038
SMART:SM00439 MGI:MGI:2679272 GO:GO:0005525 GO:GO:0003677
GO:GO:0003924 GO:GO:0006184 CTD:57597 eggNOG:NOG77890
HOVERGEN:HBG107492 OrthoDB:EOG4R23SX EMBL:AB257855 EMBL:AB257860
EMBL:AK147250 EMBL:AK147400 EMBL:AK164229 EMBL:AL928567
EMBL:BC044873 EMBL:BC057623 EMBL:BC060615 EMBL:BC072602
IPI:IPI00396779 RefSeq:NP_940815.3 UniGene:Mm.309498
ProteinModelPortal:Q3UHR0 SMR:Q3UHR0 PhosphoSite:Q3UHR0
PRIDE:Q3UHR0 Ensembl:ENSMUST00000118987 Ensembl:ENSMUST00000122148
GeneID:268515 KEGG:mmu:268515 UCSC:uc007msd.2
GeneTree:ENSGT00530000063602 OMA:LDHHGNS NextBio:392357 Bgee:Q3UHR0
CleanEx:MM_BAHCC1 Genevestigator:Q3UHR0 Uniprot:Q3UHR0
Length = 2643
Score = 153 (58.9 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 37/111 (33%), Positives = 60/111 (54%)
Query: 3 KPKAPRRTLESYTVKSISKTIKPGDC-VLMRPSEPSKPSYVAKIERIESDARGANVKVHV 61
K KA R+ V+ +T++ GDC V + P+ P Y+ +IE + ++ G+N+ V V
Sbjct: 2501 KGKA-RKLFYKAIVRG-KETLRIGDCAVFLSAGRPNLP-YIGRIESLW-ESWGSNMVVKV 2556
Query: 62 RWYYRPEESIGGRRQFHGSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKL 112
+W+Y PEE+ G+RQ G ++ S H D TI KC V + Y ++
Sbjct: 2557 KWFYHPEETKLGKRQSDGKNALYQSCHEDENDVQTISHKCQVVGREQYEQM 2607
>FB|FBgn0052529 [details] [associations]
symbol:Hers "Histone gene-specific Epigenetic Repressor in
late S phase" species:7227 "Drosophila melanogaster" [GO:0007476
"imaginal disc-derived wing morphogenesis" evidence=IMP]
[GO:0006338 "chromatin remodeling" evidence=IGI;IMP;IPI]
[GO:0006342 "chromatin silencing" evidence=IMP] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IDA] InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038
SMART:SM00439 EMBL:AE014298 GO:GO:0006338 GO:GO:0006342
GO:GO:0000976 GO:GO:0007476 GeneTree:ENSGT00390000003967
GeneID:33000 KEGG:dme:Dmel_CG32529 FlyBase:FBgn0052529
GenomeRNAi:33000 NextBio:781443 HSSP:P48606 RefSeq:NP_001245771.1
RefSeq:NP_608360.2 ProteinModelPortal:Q9VWC0 IntAct:Q9VWC0
EnsemblMetazoa:FBtr0074800 EnsemblMetazoa:FBtr0306520
EnsemblMetazoa:FBtr0332993 UCSC:CG32529-RA InParanoid:Q9VWC0
OMA:GLHTEHA PhylomeDB:Q9VWC0 ArrayExpress:Q9VWC0 Bgee:Q9VWC0
Uniprot:Q9VWC0
Length = 2529
Score = 151 (58.2 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 30/89 (33%), Positives = 49/89 (55%)
Query: 23 IKPGDCVLMRPSEPSKPSYVAKIERIESDARGANVKVHVRWYYRPEESIGGRRQFHGSKE 82
I+ DCVL++ +E ++ YVAK+ + + + + + WYYRPE + GR++ E
Sbjct: 2369 IRIRDCVLLKANEDNELPYVAKVAHLWQNPEDGEMMMSLLWYYRPEHTDQGRQRNDCPDE 2428
Query: 83 VFLSDHHDIQSADTIEGKCTVHSFKSYTK 111
V+ S H D S +E KC V +F Y +
Sbjct: 2429 VYASRHRDHNSVACVEDKCYVLTFSEYCR 2457
>UNIPROTKB|I3LCT7 [details] [associations]
symbol:BAHCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001025
Pfam:PF01426 PROSITE:PS51038 SMART:SM00439 GO:GO:0003677
GeneTree:ENSGT00530000063602 EMBL:FP340396
Ensembl:ENSSSCT00000027597 Uniprot:I3LCT7
Length = 2599
Score = 148 (57.2 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 42/147 (28%), Positives = 71/147 (48%)
Query: 3 KPKAPRRTLESYTVKSISKTIKPGDC-VLMRPSEPSKPSYVAKIERIESDARGANVKVHV 61
K KA R+ V+ +T++ GDC V + P+ P Y+ +IE + ++ G+N+ V V
Sbjct: 2457 KGKA-RKLFYKAIVRG-KETLRIGDCAVFLSAGRPNLP-YIGRIESMW-ESWGSNMVVKV 2512
Query: 62 RWYYRPEESIGGRRQFHGSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKLDAVGN---- 117
+W+Y PEE+ G+R G ++ S H D TI KC V + Y ++
Sbjct: 2513 KWFYHPEETRLGKRHSDGKNALYQSCHEDENDVQTISHKCQVVGREQYEQMTRSRKYQDR 2572
Query: 118 -DDFFCRFEYNSSSGAF-NPDRVAVYC 142
D ++ Y+ ++G D V + C
Sbjct: 2573 RDLYYLAGTYDPTTGRLVTADGVPILC 2599
>UNIPROTKB|I3L5Y2 [details] [associations]
symbol:BAHCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001025
Pfam:PF01426 PROSITE:PS51038 SMART:SM00439 GO:GO:0003677
GeneTree:ENSGT00530000063602 OMA:LDHHGNS EMBL:FP340396
Ensembl:ENSSSCT00000023942 Uniprot:I3L5Y2
Length = 2619
Score = 148 (57.2 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 42/147 (28%), Positives = 71/147 (48%)
Query: 3 KPKAPRRTLESYTVKSISKTIKPGDC-VLMRPSEPSKPSYVAKIERIESDARGANVKVHV 61
K KA R+ V+ +T++ GDC V + P+ P Y+ +IE + ++ G+N+ V V
Sbjct: 2477 KGKA-RKLFYKAIVRG-KETLRIGDCAVFLSAGRPNLP-YIGRIESMW-ESWGSNMVVKV 2532
Query: 62 RWYYRPEESIGGRRQFHGSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKLDAVGN---- 117
+W+Y PEE+ G+R G ++ S H D TI KC V + Y ++
Sbjct: 2533 KWFYHPEETRLGKRHSDGKNALYQSCHEDENDVQTISHKCQVVGREQYEQMTRSRKYQDR 2592
Query: 118 -DDFFCRFEYNSSSGAF-NPDRVAVYC 142
D ++ Y+ ++G D V + C
Sbjct: 2593 RDLYYLAGTYDPTTGRLVTADGVPILC 2619
>UNIPROTKB|J9P091 [details] [associations]
symbol:BAHCC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038 SMART:SM00439
GO:GO:0003677 GeneTree:ENSGT00530000063602 EMBL:AAEX03006175
EMBL:AAEX03006176 EMBL:AAEX03006177 Ensembl:ENSCAFT00000048729
Uniprot:J9P091
Length = 2322
Score = 147 (56.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 39/112 (34%), Positives = 60/112 (53%)
Query: 3 KPKAPRRTLESYTVKSISKTIKPGDC-VLMRPSEPSKPSYVAKIERI-ESDARGANVKVH 60
K KA R+ V+ +T++ GDC V + P+ P Y+ +IE + ES A +N+ V
Sbjct: 2180 KGKA-RKLFYKAIVRG-KETLRIGDCAVFLSAGRPNLP-YIGRIESMWESWA--SNMVVK 2234
Query: 61 VRWYYRPEESIGGRRQFHGSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKL 112
V+W+Y PEE+ G+RQ G ++ S H D TI KC V + Y ++
Sbjct: 2235 VKWFYHPEETKLGKRQSDGKNALYQSCHEDENDVQTISHKCQVVGREQYEQM 2286
>UNIPROTKB|F1PQM0 [details] [associations]
symbol:BAHCC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038 SMART:SM00439
GO:GO:0003677 GeneTree:ENSGT00530000063602 OMA:LDHHGNS
EMBL:AAEX03006175 EMBL:AAEX03006176 EMBL:AAEX03006177
Ensembl:ENSCAFT00000009236 Uniprot:F1PQM0
Length = 2533
Score = 147 (56.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 39/112 (34%), Positives = 60/112 (53%)
Query: 3 KPKAPRRTLESYTVKSISKTIKPGDC-VLMRPSEPSKPSYVAKIERI-ESDARGANVKVH 60
K KA R+ V+ +T++ GDC V + P+ P Y+ +IE + ES A +N+ V
Sbjct: 2391 KGKA-RKLFYKAIVRG-KETLRIGDCAVFLSAGRPNLP-YIGRIESMWESWA--SNMVVK 2445
Query: 61 VRWYYRPEESIGGRRQFHGSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKL 112
V+W+Y PEE+ G+RQ G ++ S H D TI KC V + Y ++
Sbjct: 2446 VKWFYHPEETKLGKRQSDGKNALYQSCHEDENDVQTISHKCQVVGREQYEQM 2497
>TAIR|locus:2121601 [details] [associations]
symbol:AT4G23120 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038
SMART:SM00439 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
EMBL:AL031018 EMBL:AL161558 EMBL:AL022347 IPI:IPI00520892
PIR:T04829 RefSeq:NP_194043.1 UniGene:At.54486
ProteinModelPortal:O65464 SMR:O65464 PaxDb:O65464
EnsemblPlants:AT4G23120.1 GeneID:828411 KEGG:ath:AT4G23120
TAIR:At4g23120 eggNOG:NOG239021 HOGENOM:HOG000237923
InParanoid:O65464 OMA:KLEWRPE PhylomeDB:O65464
ProtClustDB:CLSN2683146 ArrayExpress:O65464 Genevestigator:O65464
Uniprot:O65464
Length = 360
Score = 135 (52.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 31/81 (38%), Positives = 47/81 (58%)
Query: 27 DCVLMRPSEPSKPSYVAKIERIESDARGANVKVHVRWYYRPEE---SIGGRRQFHGSKEV 83
D VL+ P + KP YVA I+ I + + +VK+ V+W YRPEE G + GS+++
Sbjct: 63 DSVLLVPEDGEKP-YVAIIKDIYTQRKEGHVKLEVQWLYRPEEVEKKYVGNWKSKGSRDL 121
Query: 84 FLSDHHDIQSADTIEGKCTVH 104
F S H D A++++ C VH
Sbjct: 122 FYSFHRDEVFAESVKDDCIVH 142
>FB|FBgn0051151 [details] [associations]
symbol:wge "winged eye" species:7227 "Drosophila
melanogaster" [GO:0003677 "DNA binding" evidence=IEA] [GO:0007560
"imaginal disc morphogenesis" evidence=IMP] [GO:0000785 "chromatin"
evidence=IDA] InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038
SMART:SM00439 EMBL:AE014297 GO:GO:0005634 GO:GO:0030154
GO:GO:0003677 GO:GO:0000785 eggNOG:NOG77890
GeneTree:ENSGT00530000063602 GO:GO:0007560 EMBL:AB190214
EMBL:AY118516 RefSeq:NP_001036746.1 RefSeq:NP_732790.2
RefSeq:NP_732791.1 UniGene:Dm.22507 ProteinModelPortal:Q3LHL9
SMR:Q3LHL9 IntAct:Q3LHL9 MINT:MINT-300349 STRING:Q3LHL9
PaxDb:Q3LHL9 PRIDE:Q3LHL9 EnsemblMetazoa:FBtr0110835 GeneID:42687
KEGG:dme:Dmel_CG31151 UCSC:CG31151-RC CTD:42687 FlyBase:FBgn0051151
InParanoid:Q3LHL9 OMA:IKREPCQ OrthoDB:EOG4H9W1N PhylomeDB:Q3LHL9
GenomeRNAi:42687 NextBio:830062 Bgee:Q3LHL9 Uniprot:Q3LHL9
Length = 1658
Score = 143 (55.4 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 39/126 (30%), Positives = 61/126 (48%)
Query: 15 TVKSISKTIKPGD-CVLMRPSEPSKPSYVAKIERIESDARGANVKVHVRWYYRPEESIG- 72
T+K +TI GD V + P +P Y+ +IE + G V V V W+Y PEE+ G
Sbjct: 1504 TIKRGKETITVGDSAVFLSTGRPDRP-YIGRIESMWETTTGNKV-VRVAWFYHPEETTGC 1561
Query: 73 GRRQFHGSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKLDAVGNDDFFCRFEYNSS--- 129
+ +F G+ +F S H D TI +C V F SY + + + ++ N +
Sbjct: 1562 PKLKFPGA--LFESPHEDENDVQTISHRCEVLQFGSYFEKFGADSKQYQSIYDNNDTYYL 1619
Query: 130 SGAFNP 135
+G +NP
Sbjct: 1620 AGHYNP 1625
>UNIPROTKB|E2RRR3 [details] [associations]
symbol:PBRM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR009071 InterPro:IPR001025 InterPro:IPR001487
Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51038 SMART:SM00297 SMART:SM00439 Pfam:PF00505
GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00390000003017 EMBL:AAEX03012193
EMBL:AAEX03012194 EMBL:AAEX03012195 Ensembl:ENSCAFT00000014499
Uniprot:E2RRR3
Length = 1635
Score = 142 (55.0 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 38/112 (33%), Positives = 59/112 (52%)
Query: 26 GDCVLMRPSEPSKPSYVAKIERIESDARGANVKVHVRWYYRPEESIG-GRRQFHGSKEVF 84
GD V + P+E S ++ IER+ D+ G ++ W+YRP E+ R+F KEVF
Sbjct: 962 GDYVYVEPAEASLQPHIVCIERLWEDSAGEKW-LYGCWFYRPNETFHLATRKFL-EKEVF 1019
Query: 85 LSDHHDIQSADTIEGKCTVHSFKSYTKL--DAVGNDDFF-CRFEYNSSSGAF 133
SD+++ I GKC V K Y KL + ++D F C Y++ + +F
Sbjct: 1020 KSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSF 1071
>UNIPROTKB|E2RRL7 [details] [associations]
symbol:PBRM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR009071 InterPro:IPR001025 InterPro:IPR001487
Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51038 SMART:SM00297 SMART:SM00439 Pfam:PF00505
GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 OMA:WLKVGDC GeneTree:ENSGT00390000003017
EMBL:AAEX03012193 EMBL:AAEX03012194 EMBL:AAEX03012195
Ensembl:ENSCAFT00000014524 Uniprot:E2RRL7
Length = 1689
Score = 142 (55.0 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 38/112 (33%), Positives = 59/112 (52%)
Query: 26 GDCVLMRPSEPSKPSYVAKIERIESDARGANVKVHVRWYYRPEESIG-GRRQFHGSKEVF 84
GD V + P+E S ++ IER+ D+ G ++ W+YRP E+ R+F KEVF
Sbjct: 961 GDYVYVEPAEASLQPHIVCIERLWEDSAGEKW-LYGCWFYRPNETFHLATRKFL-EKEVF 1018
Query: 85 LSDHHDIQSADTIEGKCTVHSFKSYTKL--DAVGNDDFF-CRFEYNSSSGAF 133
SD+++ I GKC V K Y KL + ++D F C Y++ + +F
Sbjct: 1019 KSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSF 1070
>UNIPROTKB|H0Y5B5 [details] [associations]
symbol:PBRM1 "Protein polybromo-1" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001025
InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297 SMART:SM00439
GO:GO:0003677 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 EMBL:AC104446 HGNC:HGNC:30064 ChiTaRS:PBRM1
EMBL:AC112215 ProteinModelPortal:H0Y5B5 Ensembl:ENST00000446103
Bgee:H0Y5B5 Uniprot:H0Y5B5
Length = 1085
Score = 139 (54.0 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 37/112 (33%), Positives = 59/112 (52%)
Query: 26 GDCVLMRPSEPSKPSYVAKIERIESDARGANVKVHVRWYYRPEESIG-GRRQFHGSKEVF 84
GD V + P+E + ++ IER+ D+ G ++ W+YRP E+ R+F KEVF
Sbjct: 919 GDYVYVEPAEANLQPHIVCIERLWEDSAGEKW-LYGCWFYRPNETFHLATRKFL-EKEVF 976
Query: 85 LSDHHDIQSADTIEGKCTVHSFKSYTKL--DAVGNDDFF-CRFEYNSSSGAF 133
SD+++ I GKC V K Y KL + ++D F C Y++ + +F
Sbjct: 977 KSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSF 1028
>UNIPROTKB|E1BNH8 [details] [associations]
symbol:E1BNH8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001890 "placenta
development" evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR009071
InterPro:IPR001025 InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297
SMART:SM00439 Pfam:PF00505 GO:GO:0008285 GO:GO:0007507
GO:GO:0000776 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0001890
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 OMA:WLKVGDC GeneTree:ENSGT00390000003017
EMBL:DAAA02054367 IPI:IPI00699896 Ensembl:ENSBTAT00000019672
Uniprot:E1BNH8
Length = 1664
Score = 141 (54.7 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 38/112 (33%), Positives = 59/112 (52%)
Query: 26 GDCVLMRPSEPSKPSYVAKIERIESDARGANVKVHVRWYYRPEESIG-GRRQFHGSKEVF 84
GD V + PSE + ++ IER+ D+ G ++ W+YRP E+ R+F KEVF
Sbjct: 936 GDYVYVEPSEVNLQPHIVCIERLWEDSAGEKW-LYGCWFYRPNETFHLATRKFL-EKEVF 993
Query: 85 LSDHHDIQSADTIEGKCTVHSFKSYTKL--DAVGNDDFF-CRFEYNSSSGAF 133
SD+++ I GKC V K Y KL + ++D F C Y++ + +F
Sbjct: 994 KSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSF 1045
>RGD|1565549 [details] [associations]
symbol:Pbrm1 "polybromo 1" species:10116 "Rattus norvegicus"
[GO:0000776 "kinetochore" evidence=IEA;ISO] [GO:0001890 "placenta
development" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0007507 "heart development"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA;ISO] InterPro:IPR009071 InterPro:IPR001025
InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297 SMART:SM00439
Pfam:PF00505 RGD:1565549 GO:GO:0008285 GO:GO:0007507 GO:GO:0000776
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0001890 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
OrthoDB:EOG41NTK5 GeneTree:ENSGT00390000003017 IPI:IPI00766567
Ensembl:ENSRNOT00000016581 UCSC:RGD:1565549 NextBio:655693
ArrayExpress:D3ZT52 Uniprot:D3ZT52
Length = 1704
Score = 141 (54.7 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 37/112 (33%), Positives = 59/112 (52%)
Query: 26 GDCVLMRPSEPSKPSYVAKIERIESDARGANVKVHVRWYYRPEESIG-GRRQFHGSKEVF 84
GD V + P+E + ++ IER+ D+ G ++ W+YRP E+ R+F KEVF
Sbjct: 976 GDYVYVEPAEANLQPHIVCIERLWEDSAGEKW-LYGCWFYRPNETFHLATRKFL-EKEVF 1033
Query: 85 LSDHHDIQSADTIEGKCTVHSFKSYTKL--DAVGNDDFF-CRFEYNSSSGAF 133
SD+++ I GKC V K Y KL + ++D F C Y++ + +F
Sbjct: 1034 KSDYYNKVPVSKILGKCVVMFVKEYFKLCPETFRDEDVFVCESRYSAKTKSF 1085
>SGD|S000003288 [details] [associations]
symbol:RSC1 "Component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0016586 "RSC
complex" evidence=IEA;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IC;ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IC;ISS] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IPI] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0030435 "sporulation resulting in formation of a
cellular spore" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0042173 "regulation of sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0006337 "nucleosome
disassembly" evidence=IDA] InterPro:IPR001025 InterPro:IPR001487
InterPro:IPR027180 Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297 SMART:SM00439
SGD:S000003288 GO:GO:0006355 EMBL:BK006941 GO:GO:0003677
GO:GO:0030435 GO:GO:0006368 GO:GO:0006337 GO:GO:0016586
GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 InterPro:IPR018359 GO:GO:0006303 EMBL:DQ115391
GO:GO:0042173 GeneTree:ENSGT00390000003017 KO:K11756
OrthoDB:EOG4D5673 EMBL:Z72841 PIR:S64350 RefSeq:NP_011570.1
ProteinModelPortal:P53236 SMR:P53236 DIP:DIP-984N IntAct:P53236
MINT:MINT-493686 STRING:P53236 PaxDb:P53236 EnsemblFungi:YGR056W
GeneID:852947 KEGG:sce:YGR056W CYGD:YGR056w HOGENOM:HOG000247903
OMA:YNESDKV NextBio:972696 Genevestigator:P53236 GermOnline:YGR056W
PANTHER:PTHR16062:SF3 Uniprot:P53236
Length = 928
Score = 138 (53.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 41/138 (29%), Positives = 62/138 (44%)
Query: 26 GDCVLMR-PSEPSKPSYVAKIERIESDARGANVKVHVRWYYRPEESIGGRRQFHGSKEVF 84
GD VL+ P++ +KP V +I R+ S G N ++ WY+RPE+++ + EV
Sbjct: 373 GDWVLLHNPNDINKP-IVGQIFRLWSTTDG-NKWLNACWYFRPEQTVHRVDRLFYKNEVM 430
Query: 85 LSDHHDIQSADTIEGKCTVHSFKSYTKLDA---VGNDDFFCRFEYNSSSGAFNPDRVAVY 141
+ + I+GKC V F + + D V F C F YN S FN R
Sbjct: 431 KTGQYRDHPIQDIKGKCYVIHFTRFQRGDPSTKVNGPQFVCEFRYNESDKVFNKIRTWKA 490
Query: 142 CKCEMPYNPDDLMVQCEG 159
C E + D+ + G
Sbjct: 491 CLPEELRDQDEPTIPVNG 508
>UNIPROTKB|E7EVG2 [details] [associations]
symbol:PBRM1 "Protein polybromo-1" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR009071
InterPro:IPR001025 InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297
SMART:SM00439 Pfam:PF00505 GO:GO:0003677 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:AC104446
HGNC:HGNC:30064 ChiTaRS:PBRM1 EMBL:AC112215 IPI:IPI00916875
ProteinModelPortal:E7EVG2 SMR:E7EVG2 Ensembl:ENST00000423351
UCSC:uc003dez.1 ArrayExpress:E7EVG2 Bgee:E7EVG2 Uniprot:E7EVG2
Length = 1461
Score = 139 (54.0 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 37/112 (33%), Positives = 59/112 (52%)
Query: 26 GDCVLMRPSEPSKPSYVAKIERIESDARGANVKVHVRWYYRPEESIG-GRRQFHGSKEVF 84
GD V + P+E + ++ IER+ D+ G ++ W+YRP E+ R+F KEVF
Sbjct: 960 GDYVYVEPAEANLQPHIVCIERLWEDSAGEKW-LYGCWFYRPNETFHLATRKFL-EKEVF 1017
Query: 85 LSDHHDIQSADTIEGKCTVHSFKSYTKL--DAVGNDDFF-CRFEYNSSSGAF 133
SD+++ I GKC V K Y KL + ++D F C Y++ + +F
Sbjct: 1018 KSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSF 1069
>MGI|MGI:1923998 [details] [associations]
symbol:Pbrm1 "polybromo 1" species:10090 "Mus musculus"
[GO:0000776 "kinetochore" evidence=IDA] [GO:0001890 "placenta
development" evidence=IMP] [GO:0001974 "blood vessel remodeling"
evidence=TAS] [GO:0003007 "heart morphogenesis" evidence=TAS]
[GO:0003349 "epicardium-derived cardiac endothelial cell
differentiation" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IC] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007507 "heart development"
evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0060948 "cardiac vascular smooth
muscle cell development" evidence=TAS] [GO:0060979 "vasculogenesis
involved in coronary vascular morphogenesis" evidence=TAS]
InterPro:IPR009071 InterPro:IPR001025 InterPro:IPR001487
Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51038 SMART:SM00297 SMART:SM00439 MGI:MGI:1923998
Pfam:PF00505 GO:GO:0005634 GO:GO:0045893 GO:GO:0008285
GO:GO:0000776 GO:GO:0003677 GO:GO:0003007 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0001974 GO:GO:0001890
GO:GO:0060979 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 InterPro:IPR018359 GO:GO:0060948 EMBL:AC154446
HOVERGEN:HBG079860 OrthoDB:EOG41NTK5 ChiTaRS:PBRM1 EMBL:AC154727
EMBL:BC023452 EMBL:BC029037 EMBL:BC055456 EMBL:BC055708
EMBL:BF451491 EMBL:CN530699 EMBL:AK009582 EMBL:AK030781
EMBL:AK030252 EMBL:AK166588 IPI:IPI00856358 IPI:IPI01023209
UniGene:Mm.27913 PDB:2YQD PDBsum:2YQD ProteinModelPortal:Q8BSQ9
SMR:Q8BSQ9 DIP:DIP-48885N IntAct:Q8BSQ9 STRING:Q8BSQ9
PhosphoSite:Q8BSQ9 PaxDb:Q8BSQ9 PRIDE:Q8BSQ9
Ensembl:ENSMUST00000112094 Ensembl:ENSMUST00000112095
GeneTree:ENSGT00390000003017 EvolutionaryTrace:Q8BSQ9 Bgee:Q8BSQ9
Genevestigator:Q8BSQ9 GO:GO:0003349 Uniprot:Q8BSQ9
Length = 1634
Score = 139 (54.0 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 37/112 (33%), Positives = 59/112 (52%)
Query: 26 GDCVLMRPSEPSKPSYVAKIERIESDARGANVKVHVRWYYRPEESIG-GRRQFHGSKEVF 84
GD V + P+E + ++ IER+ D+ G ++ W+YRP E+ R+F KEVF
Sbjct: 961 GDYVYVEPAEANLQPHIVCIERLWEDSAGEKW-LYGCWFYRPNETFHLATRKFL-EKEVF 1018
Query: 85 LSDHHDIQSADTIEGKCTVHSFKSYTKL--DAVGNDDFF-CRFEYNSSSGAF 133
SD+++ I GKC V K Y KL + ++D F C Y++ + +F
Sbjct: 1019 KSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSF 1070
>ZFIN|ZDB-GENE-010501-3 [details] [associations]
symbol:pbrm1l "polybromo 1, like" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR009071 InterPro:IPR001025
InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297 SMART:SM00439
Pfam:PF00505 ZFIN:ZDB-GENE-010501-3 GO:GO:0003677 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00390000003017 EMBL:BX546446 EMBL:BX649498
IPI:IPI00993768 Ensembl:ENSDART00000131203 Uniprot:E7EZ71
Length = 1648
Score = 139 (54.0 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 39/123 (31%), Positives = 60/123 (48%)
Query: 20 SKTIKPGDCVLMRPSEPSKPSYVAKIERIESDARGANVKVHVRWYYRPEESIG-GRRQFH 78
+ T GD V ++P+E + +V IE++ D G ++ W+YRPEE+ R+F
Sbjct: 939 NNTYSIGDYVYVQPAEANLQPHVVCIEKLWKDESGQQW-MYGCWFYRPEETFHLATRKFL 997
Query: 79 GSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKLDAVG---NDDFFCRFEYNSSSGAFNP 135
KE+F SD+++ I GKC V K Y KL G D + C Y + AF
Sbjct: 998 -EKEIFKSDYNNRVPFSKILGKCFVLFVKDYFKLQPEGFKPEDVYVCESRYTVRTKAFKK 1056
Query: 136 DRV 138
++
Sbjct: 1057 IKI 1059
>UNIPROTKB|Q86U86 [details] [associations]
symbol:PBRM1 "Protein polybromo-1" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0001890 "placenta
development" evidence=IEA] [GO:0007507 "heart development"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0003682 "chromatin binding" evidence=NAS] [GO:0007067 "mitosis"
evidence=TAS] [GO:0000228 "nuclear chromosome" evidence=NAS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR009071 InterPro:IPR001025 InterPro:IPR001487
Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51038 SMART:SM00297 SMART:SM00439 Pfam:PF00505
GO:GO:0008285 GO:GO:0007507 GO:GO:0000776 GO:GO:0007067
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0001890 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359 GO:GO:0000228
MIM:144700 CTD:55193 HOVERGEN:HBG079860 KO:K11757 EMBL:AF197569
EMBL:AF225870 EMBL:AF225871 EMBL:AF225872 EMBL:AF177387
EMBL:AY281068 EMBL:BC115009 EMBL:BC115010 EMBL:BC115011
EMBL:BC129934 EMBL:BC129935 EMBL:AK056541 IPI:IPI00023097
IPI:IPI00301041 IPI:IPI00334894 IPI:IPI00384176 IPI:IPI00398781
IPI:IPI00640304 IPI:IPI00873041 IPI:IPI00909142 IPI:IPI00910435
RefSeq:NP_060783.3 UniGene:Hs.189920 UniGene:Hs.476320 PDB:2KTB
PDB:3G0J PDB:3HMF PDB:3IU5 PDB:3IU6 PDB:3K2J PDB:3LJW PDB:3MB4
PDB:3TLP PDBsum:2KTB PDBsum:3G0J PDBsum:3HMF PDBsum:3IU5
PDBsum:3IU6 PDBsum:3K2J PDBsum:3LJW PDBsum:3MB4 PDBsum:3TLP
ProteinModelPortal:Q86U86 SMR:Q86U86 DIP:DIP-33045N IntAct:Q86U86
MINT:MINT-1195749 STRING:Q86U86 PhosphoSite:Q86U86 DMDM:73921624
PaxDb:Q86U86 PRIDE:Q86U86 Ensembl:ENST00000296302
Ensembl:ENST00000337303 Ensembl:ENST00000356770
Ensembl:ENST00000394830 Ensembl:ENST00000409057
Ensembl:ENST00000409114 Ensembl:ENST00000409767
Ensembl:ENST00000410007 Ensembl:ENST00000412587 GeneID:55193
KEGG:hsa:55193 UCSC:uc003deq.2 UCSC:uc003der.2 UCSC:uc003des.2
UCSC:uc003det.2 UCSC:uc003deu.2 UCSC:uc003dew.2 UCSC:uc003dey.2
UCSC:uc010hmk.1 GeneCards:GC03M052579 H-InvDB:HIX0003364
HGNC:HGNC:30064 HPA:HPA015629 MIM:606083 neXtProt:NX_Q86U86
PharmGKB:PA162398846 InParanoid:Q86U86 OMA:WLKVGDC PhylomeDB:Q86U86
ChEMBL:CHEMBL1795184 ChiTaRS:PBRM1 EvolutionaryTrace:Q86U86
GenomeRNAi:55193 NextBio:59051 ArrayExpress:Q86U86 Bgee:Q86U86
Genevestigator:Q86U86 GermOnline:ENSG00000163939 Uniprot:Q86U86
Length = 1689
Score = 139 (54.0 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 37/112 (33%), Positives = 59/112 (52%)
Query: 26 GDCVLMRPSEPSKPSYVAKIERIESDARGANVKVHVRWYYRPEESIG-GRRQFHGSKEVF 84
GD V + P+E + ++ IER+ D+ G ++ W+YRP E+ R+F KEVF
Sbjct: 961 GDYVYVEPAEANLQPHIVCIERLWEDSAGEKW-LYGCWFYRPNETFHLATRKFL-EKEVF 1018
Query: 85 LSDHHDIQSADTIEGKCTVHSFKSYTKL--DAVGNDDFF-CRFEYNSSSGAF 133
SD+++ I GKC V K Y KL + ++D F C Y++ + +F
Sbjct: 1019 KSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSF 1070
>WB|WBGene00007042 [details] [associations]
symbol:pbrm-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] InterPro:IPR009071
InterPro:IPR001025 InterPro:IPR001487 InterPro:IPR007087
InterPro:IPR015880 Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503
PROSITE:PS00028 PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297
SMART:SM00355 SMART:SM00439 Pfam:PF00505 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0003677
GO:GO:0008270 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0040035 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:Z72517
HSSP:Q03330 EMBL:Z72503 KO:K11757 GeneTree:ENSGT00390000003017
PIR:T19481 RefSeq:NP_001021008.1 ProteinModelPortal:G5EEY5
SMR:G5EEY5 PRIDE:G5EEY5 EnsemblMetazoa:C26C6.1a GeneID:172504
KEGG:cel:CELE_C26C6.1 CTD:172504 WormBase:C26C6.1a OMA:IQNPIDM
NextBio:875801 Uniprot:G5EEY5
Length = 1883
Score = 137 (53.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 34/118 (28%), Positives = 56/118 (47%)
Query: 20 SKTIKPGDCVLMRPSEPSKPSYVAKIERIESDARGANVKVHVRWYYRPEESIG-GRRQFH 78
+K + P + R E P ++ +IER D G + W YRPEE++ R+F
Sbjct: 994 TKYVAPCYAYVSRSDEKKTPLHIFRIERTFKDENGEKA-LQGHWVYRPEETLHLASRKFM 1052
Query: 79 GSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTK--LDAVGNDD-FFCRFEYNSSSGAF 133
+EVFL+ D A+ + G+C V S +YT + +D + C ++Y+ F
Sbjct: 1053 -KQEVFLTPFRDTVLAERLRGRCVVISLSTYTSKVITEYSEEDVYLCEYKYHGKPKYF 1109
>UNIPROTKB|F1NLL8 [details] [associations]
symbol:PBRM1 "Protein polybromo-1" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0007507 "heart development" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] InterPro:IPR009071
InterPro:IPR001025 InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297
SMART:SM00439 Pfam:PF00505 GO:GO:0008285 GO:GO:0000776
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 IPI:IPI00571677 OMA:WLKVGDC
GeneTree:ENSGT00390000003017 EMBL:AADN02052994
Ensembl:ENSGALT00000002415 Uniprot:F1NLL8
Length = 1630
Score = 136 (52.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 36/112 (32%), Positives = 59/112 (52%)
Query: 26 GDCVLMRPSEPSKPSYVAKIERIESDARGANVKVHVRWYYRPEESIG-GRRQFHGSKEVF 84
GD V + P+E + ++ IER+ D+ G ++ W+YRP E+ R+F KEVF
Sbjct: 959 GDYVYVEPAEANLQPHIVCIERLWEDSAGEKW-LYGCWFYRPNETFHLATRKFL-EKEVF 1016
Query: 85 LSDHHDIQSADTIEGKCTVHSFKSYTKL--DAVGNDDFF-CRFEYNSSSGAF 133
SD+++ I GKC V K Y KL + ++D + C Y++ + +F
Sbjct: 1017 KSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVYVCESRYSAKTKSF 1068
>UNIPROTKB|Q90941 [details] [associations]
symbol:PBRM1 "Protein polybromo-1" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 InterPro:IPR001025
InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297 SMART:SM00439
Pfam:PF00505 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0016568 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359 EMBL:X90849
IPI:IPI00571677 PIR:JC5056 RefSeq:NP_990496.1 UniGene:Gga.3045
PDB:1W4S PDBsum:1W4S ProteinModelPortal:Q90941 SMR:Q90941
STRING:Q90941 PRIDE:Q90941 GeneID:396074 KEGG:gga:396074 CTD:55193
HOGENOM:HOG000045795 HOVERGEN:HBG079860 InParanoid:Q90941 KO:K11757
OrthoDB:EOG41NTK5 EvolutionaryTrace:Q90941 NextBio:20816133
Uniprot:Q90941
Length = 1633
Score = 136 (52.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 36/112 (32%), Positives = 59/112 (52%)
Query: 26 GDCVLMRPSEPSKPSYVAKIERIESDARGANVKVHVRWYYRPEESIG-GRRQFHGSKEVF 84
GD V + P+E + ++ IER+ D+ G ++ W+YRP E+ R+F KEVF
Sbjct: 959 GDYVYVEPAEANLQPHIVCIERLWEDSAGEKW-LYGCWFYRPNETFHLATRKFL-EKEVF 1016
Query: 85 LSDHHDIQSADTIEGKCTVHSFKSYTKL--DAVGNDDFF-CRFEYNSSSGAF 133
SD+++ I GKC V K Y KL + ++D + C Y++ + +F
Sbjct: 1017 KSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVYVCESRYSAKTKSF 1068
>TAIR|locus:2130090 [details] [associations]
symbol:ORC1A "origin recognition complex 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000808 "origin recognition complex"
evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006260 "DNA replication"
evidence=IEA;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IMP] [GO:0010385
"double-stranded methylated DNA binding" evidence=IDA]
InterPro:IPR001025 InterPro:IPR001965 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR019787 InterPro:IPR020793
Pfam:PF00004 Pfam:PF00628 Pfam:PF01426 PROSITE:PS50016
PROSITE:PS51038 SMART:SM00249 SMART:SM00382 SMART:SM00439
GO:GO:0005524 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 GO:GO:0046872 GO:GO:0006260 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0017111
GO:GO:0010385 UniGene:At.70068 KO:K02603 PANTHER:PTHR10763:SF6
GO:GO:0000808 EMBL:AJ421410 IPI:IPI00523667 RefSeq:NP_567440.1
UniGene:At.25357 ProteinModelPortal:Q710E8 SMR:Q710E8 IntAct:Q710E8
STRING:Q710E8 PRIDE:Q710E8 EnsemblPlants:AT4G14700.1 GeneID:827121
KEGG:ath:AT4G14700 TAIR:At4g14700 HOGENOM:HOG000030288
InParanoid:Q710E8 OMA:VENCEND PhylomeDB:Q710E8
ProtClustDB:CLSN2685758 Genevestigator:Q710E8 Uniprot:Q710E8
Length = 809
Score = 132 (51.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 32/104 (30%), Positives = 56/104 (53%)
Query: 37 SKPSYVAKIERIESDARGANVKVHVRWYYRPEESIGGRRQFHGSKEVFLS-DHHDIQSAD 95
S + A+IE++ + + RWY PEE++ GR++ + +E++L+ D DI+ +
Sbjct: 241 SSDLWAARIEKLWKEVDDGVYWIRARWYMIPEETVLGRQRHNLKRELYLTNDFADIEM-E 299
Query: 96 TIEGKCTVHSFKSYTKLDAVGNDDFFCRFEYNSSSGAFNPDRVA 139
+ C V K ++K G+D F C +EY+ G+F RVA
Sbjct: 300 CVLRHCFVKCPKEFSKASNDGDDVFLCEYEYDVHWGSFK--RVA 341
>SGD|S000004349 [details] [associations]
symbol:RSC2 "Component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0016586 "RSC
complex" evidence=IEA;IDA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IDA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IPI] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0030435 "sporulation resulting in formation of a cellular
spore" evidence=IEA] [GO:0006276 "plasmid maintenance"
evidence=IMP] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IDA] [GO:0015616 "DNA translocase
activity" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IDA]
[GO:0007059 "chromosome segregation" evidence=IGI] [GO:0007062
"sister chromatid cohesion" evidence=IMP] InterPro:IPR001025
InterPro:IPR001487 InterPro:IPR027180 Pfam:PF00439 Pfam:PF01426
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297
SMART:SM00439 SGD:S000004349 GO:GO:0006355 GO:GO:0003677
EMBL:BK006945 GO:GO:0030435 GO:GO:0000724 GO:GO:0006368
GO:GO:0006276 GO:GO:0006337 GO:GO:0016586 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 EMBL:U19102 GO:GO:0006303 GO:GO:0007062
GO:GO:0042173 GeneTree:ENSGT00390000003017 KO:K11756
OrthoDB:EOG4D5673 HOGENOM:HOG000247903 PANTHER:PTHR16062:SF3
PIR:S51465 RefSeq:NP_013461.1 ProteinModelPortal:Q06488 SMR:Q06488
DIP:DIP-863N IntAct:Q06488 MINT:MINT-666605 STRING:Q06488
PaxDb:Q06488 PeptideAtlas:Q06488 EnsemblFungi:YLR357W GeneID:851071
KEGG:sce:YLR357W CYGD:YLR357w OMA:WFICEFR NextBio:967717
Genevestigator:Q06488 GermOnline:YLR357W Uniprot:Q06488
Length = 889
Score = 130 (50.8 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 46/160 (28%), Positives = 67/160 (41%)
Query: 8 RRTLESYTVKSISKTIKPGDCVLMR-PSEPSKPSYVAKIERIESDARGANVKVHVRWYYR 66
R L+ V +IS + GD L+R ++P KP V +I R+ G ++ WYYR
Sbjct: 397 RYPLDEVIVNNISYHV--GDWALLRNQNDPQKP-IVGQIFRLWKTPDGKQW-LNACWYYR 452
Query: 67 PEESIGGRRQFHGSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKLDAVGNDD------- 119
PE+++ + EV + + + GKC V F Y + GN D
Sbjct: 453 PEQTVHRVDRLFYKNEVMKTGQYRDHLVSNLVGKCYVIHFTRYQR----GNPDMKLEGPL 508
Query: 120 FFCRFEYNSSSGAFNPDRVAVYCKCEMPYNPDDLMVQCEG 159
F C F YN S FN R C E + D+ + G
Sbjct: 509 FVCEFRYNESDKIFNKIRTWKACLPEEIRDLDEATIPVNG 548
>TAIR|locus:2135575 [details] [associations]
symbol:ORC1B "origin of replication complex 1B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000808 "origin recognition complex"
evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006260 "DNA replication"
evidence=IEA;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0010385 "double-stranded methylated DNA binding"
evidence=IDA] InterPro:IPR001025 InterPro:IPR001965
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR019787
InterPro:IPR020793 Pfam:PF00004 Pfam:PF00628 Pfam:PF01426
PROSITE:PS50016 PROSITE:PS51038 SMART:SM00249 SMART:SM00382
SMART:SM00439 GO:GO:0005524 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0046872 GO:GO:0006260
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0017111 EMBL:AL161534 eggNOG:COG1474
GO:GO:0009567 EMBL:AL049730 HSSP:Q9UIG0 GO:GO:0010385 KO:K02603
PANTHER:PTHR10763:SF6 GO:GO:0000808 HOGENOM:HOG000030288
ProtClustDB:CLSN2685758 EMBL:AJ426477 IPI:IPI00542580 PIR:E85135
RefSeq:NP_192999.1 UniGene:At.48852 ProteinModelPortal:Q9SU24
SMR:Q9SU24 DIP:DIP-46671N IntAct:Q9SU24 STRING:Q9SU24 PRIDE:Q9SU24
EnsemblPlants:AT4G12620.1 GeneID:826875 KEGG:ath:AT4G12620
TAIR:At4g12620 InParanoid:Q9SU24 OMA:RIILCEP PhylomeDB:Q9SU24
ArrayExpress:Q9SU24 Genevestigator:Q9SU24 Uniprot:Q9SU24
Length = 813
Score = 127 (49.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 29/98 (29%), Positives = 52/98 (53%)
Query: 31 MRPSEPSKPSYVAKIERIESDARGANVKVHVRWYYRPEESIGGRRQFHGSKEVFLS-DHH 89
MR S + A+I+++ + + RWY PEE++ GR+ + +E++L+ D
Sbjct: 238 MREKLLSGDLWAARIDKLWKEVDDGVYWIRARWYMIPEETVSGRQPHNLKRELYLTNDFA 297
Query: 90 DIQSADTIEGKCTVHSFKSYTKLDAVGNDDFFCRFEYN 127
DI+ + I C+V K ++K G+D F C +EY+
Sbjct: 298 DIEM-ECILRHCSVKCPKEFSKASNDGDDVFLCEYEYD 334
>CGD|CAL0006080 [details] [associations]
symbol:orf19.2964 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006276 "plasmid maintenance"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0015616 "DNA
translocase activity" evidence=IEA] InterPro:IPR001025
InterPro:IPR001487 InterPro:IPR027180 Pfam:PF00439 Pfam:PF01426
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297
SMART:SM00439 CGD:CAL0006080 EMBL:AACQ01000017 EMBL:AACQ01000015
GO:GO:0003677 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 InterPro:IPR018359 KO:K11756 PANTHER:PTHR16062:SF3
RefSeq:XP_721191.1 RefSeq:XP_721463.1 ProteinModelPortal:Q5AI89
STRING:Q5AI89 GeneID:3636828 GeneID:3637116 KEGG:cal:CaO19.10481
KEGG:cal:CaO19.2964 Uniprot:Q5AI89
Length = 795
Score = 125 (49.1 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 43/144 (29%), Positives = 67/144 (46%)
Query: 22 TIKPGDCVLMR-PSEPSKPSYVAKIERIESDARGANVKVHVRWYYRPEESIGGRRQFHGS 80
T K G+ VLM+ P++P +P V +I R+ S G V++ WYYRPE++ +
Sbjct: 369 TYKIGNWVLMKNPADPERP-IVGQIFRMWSTEDGKRY-VNMCWYYRPEQTCHAVDRLFFL 426
Query: 81 KEVFLSDHHDIQSADTIEGKCTVHSFKSYTKLD---AVGNDD---FFCRFEYNSSSGAFN 134
EV + + D I G C V Y K D V + F C F YN ++ FN
Sbjct: 427 NEVCKTGQYRDHLVDDIVGPCYVIFLTRYQKGDLPEGVIPESAPWFICEFRYNENTHVFN 486
Query: 135 PDRVAVYCKC---EMPYNPDDLMV 155
R+ + C E+ +P+ ++
Sbjct: 487 --RIRTWKACLPDEVREDPEQPLI 508
>TAIR|locus:2123136 [details] [associations]
symbol:AT4G11560 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR001025 InterPro:IPR003618 Pfam:PF01426 Pfam:PF07500
PROSITE:PS51038 PROSITE:PS51321 SMART:SM00439 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.472.30 SUPFAM:SSF46942 HOGENOM:HOG000237923
EMBL:AY080679 EMBL:AY133747 IPI:IPI00528925 RefSeq:NP_192893.2
UniGene:At.44003 ProteinModelPortal:Q8RXT5 PaxDb:Q8RXT5
PRIDE:Q8RXT5 EnsemblPlants:AT4G11560.1 GeneID:826760
KEGG:ath:AT4G11560 TAIR:At4g11560 eggNOG:NOG282987
InParanoid:Q8RXT5 OMA:KELDPPV PhylomeDB:Q8RXT5
ProtClustDB:CLSN2690291 Genevestigator:Q8RXT5 Uniprot:Q8RXT5
Length = 587
Score = 121 (47.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 31/104 (29%), Positives = 56/104 (53%)
Query: 29 VLMRPSEPSKPSYVAKIERIESDARGANVKVHVRWYYRPEESI---GGRRQFHGSKEVFL 85
VL+ P + S+ YVA I+ I + + ++ + +W+YRPEE+ GG Q ++E+F
Sbjct: 137 VLLVPEDKSQKPYVAIIKDI-TQTKDGSMMILGQWFYRPEEAEKRGGGNWQSSDTRELFY 195
Query: 86 SDHHDIQSADTIEGKCTVHSFKSYTKLDA-VGNDDFFCRFEYNS 128
S H D A+++ +C V+ ++ +L N F R Y++
Sbjct: 196 SFHRDEVPAESVMHRCVVYFVPAHKQLPKRKNNPGFIVRKVYDT 239
>TAIR|locus:2097134 [details] [associations]
symbol:AT3G43990 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001025 InterPro:IPR003618 Pfam:PF01426 PROSITE:PS51038
SMART:SM00439 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.472.30 EMBL:AL163975 HOGENOM:HOG000237923
ProtClustDB:CLSN2683146 IPI:IPI00530281 PIR:T48953
RefSeq:NP_189985.1 UniGene:At.53714 ProteinModelPortal:Q9LXW1
SMR:Q9LXW1 PaxDb:Q9LXW1 PRIDE:Q9LXW1 EnsemblPlants:AT3G43990.1
GeneID:823516 KEGG:ath:AT3G43990 TAIR:At3g43990 eggNOG:NOG279418
OMA:KCERMSS PhylomeDB:Q9LXW1 Genevestigator:Q9LXW1 Uniprot:Q9LXW1
Length = 380
Score = 117 (46.2 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 27 DCVLMRPSEPSKPSYVAKIERIESDARGANVKVHVRWYYRPE---ESIGGRRQFHGSKEV 83
D VL+ P + + Y+A I+ I S + VK+ V+W+YR E E G+ + +E+
Sbjct: 88 DFVLLYPEDNKQKEYIAIIKDIYSQEKDGLVKMEVQWFYRREDIEEKHFGKWKTENPREI 147
Query: 84 FLSDHHDIQSADTIEGKCTVH 104
F S H D A++++ KC V+
Sbjct: 148 FFSFHCDEVFAESVKYKCLVY 168
>POMBASE|SPBC4B4.03 [details] [associations]
symbol:rsc1 "RSC complex subunit Rsc1" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEP]
[GO:0000790 "nuclear chromatin" evidence=ISS] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0016586 "RSC
complex" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEP]
[GO:1900388 "regulation of vesicle-mediated transport by regulation
of transcription from RNA polymerase II promoter" evidence=IMP]
InterPro:IPR001025 InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297
SMART:SM00439 PomBase:SPBC4B4.03 GO:GO:0003677 EMBL:CU329671
GO:GO:0045944 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0006338
GO:GO:0000122 GO:GO:0000790 GO:GO:0016586 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359
PIR:T40475 RefSeq:NP_596420.1 ProteinModelPortal:O74964
DIP:DIP-48389N STRING:O74964 EnsemblFungi:SPBC4B4.03.1
GeneID:2540749 KEGG:spo:SPBC4B4.03 KO:K11756 OMA:PANIRNE
OrthoDB:EOG4D5673 NextBio:20801870 GO:GO:1900388 Uniprot:O74964
Length = 803
Score = 115 (45.5 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 44/151 (29%), Positives = 66/151 (43%)
Query: 2 AKPKAPRRTLESYTVKSISKTI-KPGDCVLMR-PSEPSKPSYVAKIERIESDARGANVKV 59
A P+ P+ ++ SI T+ GD VL+R P++ SKP V++I RI N V
Sbjct: 333 ASPQLPKNDIQPAV--SIDGTLLNVGDWVLIRNPADSSKP-IVSQIYRIWKSDDDINY-V 388
Query: 60 HVRWYYRPEESIGGRRQFHGSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKLDAVG--- 116
V WY RPE+++ EVF + + I G+C V Y + G
Sbjct: 389 TVCWYLRPEQTVHRADAVFYENEVFKTSLYRDHPVSEIVGRCFVMYITRYIRGRPKGIRS 448
Query: 117 NDDFFCRFEYNSSSGAFNPDRVAVYCKCEMP 147
F C YN + F+ ++ + C MP
Sbjct: 449 TPVFVCESRYNDDTKQFS--KIKSWKAC-MP 476
>TAIR|locus:2040209 [details] [associations]
symbol:AT2G25120 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038 SMART:SM00439
EMBL:CP002685 GO:GO:0003677 IPI:IPI00531195 RefSeq:NP_180084.1
UniGene:At.52905 ProteinModelPortal:F4IRK4
EnsemblPlants:AT2G25120.1 GeneID:817050 KEGG:ath:AT2G25120
OMA:KKDCEEK PhylomeDB:F4IRK4 Uniprot:F4IRK4
Length = 380
Score = 112 (44.5 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 29/105 (27%), Positives = 53/105 (50%)
Query: 3 KPKAPRRTLESYTVKSISKTIKPGDCVLMRPSEPSKPSYVAKIERIESDARGANVKVHVR 62
K K + +++T + ++ D V + P +P+ Y A I+ I + VK+ V
Sbjct: 78 KGKKKKSHFKTFTFRGNQYALE--DSVQLVPDDPNSKPYCAIIKDIYIPNKEKYVKLAVH 135
Query: 63 WYYRPEE---SIGGRRQFHGSKEVFLSDHHDIQSADTIEGKCTVH 104
W+YRPE+ G+ + S+ +F S H D A++++ KC V+
Sbjct: 136 WFYRPEDVDKKHVGKWESKDSRNLFYSFHRDEVFAESVKHKCVVN 180
>UNIPROTKB|E1BLK1 [details] [associations]
symbol:TNRC18 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001025
Pfam:PF01426 PROSITE:PS51038 SMART:SM00439 GO:GO:0003677
GeneTree:ENSGT00530000063602 OMA:KRLHEGQ EMBL:DAAA02058355
IPI:IPI00724375 Ensembl:ENSBTAT00000028865 ArrayExpress:E1BLK1
Uniprot:E1BLK1
Length = 2879
Score = 103 (41.3 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 3 KPKAPRRTLESYTVKSISKTIKPGDC-VLMRPSEPSKPSYVAKIERIESDARGANVKVHV 61
K KA R+ V+ + I+ GDC V + P+ P Y+ +I+ + ++ G+N+ V V
Sbjct: 2712 KGKA-RKLFYKAIVRG-KEMIRIGDCAVFLSAGRPNLP-YIGRIQSMW-ESWGSNMVVRV 2767
Query: 62 RWYYRPEESIGGRRQFHG 79
+W+Y PEE+ G+R G
Sbjct: 2768 KWFYHPEETSPGKRLHEG 2785
Score = 57 (25.1 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 19/75 (25%), Positives = 32/75 (42%)
Query: 74 RRQFHGSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTK-LDAVGNDD----FFCRFEYNS 128
R+ F + ++ S H D T+ KC V + Y + L + D ++ Y
Sbjct: 2806 RKDFM-ERALYQSSHVDENDVQTVSHKCLVVGLEQYEQMLQTKKHQDSEGLYYLAGTYEP 2864
Query: 129 SSGA-FNPDRVAVYC 142
++G F+ D V V C
Sbjct: 2865 TTGMIFSTDGVPVLC 2879
>ZFIN|ZDB-GENE-060718-1 [details] [associations]
symbol:rerea "arginine-glutamic acid dipeptide (RE)
repeats a" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IMP] [GO:0048839 "inner ear development" evidence=IMP]
[GO:0060037 "pharyngeal system development" evidence=IGI;IMP]
[GO:0040036 "regulation of fibroblast growth factor receptor
signaling pathway" evidence=IGI;IMP] [GO:0031063 "regulation of
histone deacetylation" evidence=IMP] InterPro:IPR000679
InterPro:IPR001005 InterPro:IPR001025 InterPro:IPR009057
Pfam:PF00320 Pfam:PF01426 PROSITE:PS51038 SMART:SM00401
SMART:SM00439 SMART:SM00717 ZFIN:ZDB-GENE-060718-1 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0051216 GO:GO:0060037 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0048839 InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
InterPro:IPR002951 Pfam:PF03154 GeneTree:ENSGT00580000081398
GO:GO:0040036 GO:GO:0031063 EMBL:AL928977 EMBL:AL929188
EMBL:AL954857 IPI:IPI00961876 Ensembl:ENSDART00000111345
Uniprot:E7F226
Length = 1531
Score = 89 (36.4 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 24 KPGDCVLMRPSEPSKPSYVAKIERIESDARGANVKVHVRWYYRPEE 69
+PGDCV + P+ P ++ I+ + R ++ ++V+WYYR E
Sbjct: 105 RPGDCVYIESRRPNTPYFICSIQDFKLSKRD-HLLMNVKWYYRQSE 149
Score = 70 (29.7 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 80 SKEVFLSDHHDIQSADTIEGKCTVHSFKS-YTKLDAVGN-DDFFCRFEYNSSSGAFN 134
S+E+F+SD+ D A + GKC + F + + D FF YN + N
Sbjct: 181 SRELFISDYVDTYHAAALRGKCNISHFSDIFAAREFKARIDSFFYILGYNPETRRLN 237
>POMBASE|SPAC3H1.12c [details] [associations]
symbol:snt2 "Lid2 complex subunit Snt2" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005819 "spindle" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IC] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IC]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0019787 "small
conjugating protein ligase activity" evidence=ISM] [GO:0035556
"intracellular signal transduction" evidence=IEA] [GO:0044732
"mitotic spindle pole body" evidence=IDA] [GO:0048189 "Lid2
complex" evidence=IDA] InterPro:IPR001025 InterPro:IPR001965
InterPro:IPR002219 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01426
PROSITE:PS00479 PROSITE:PS50016 PROSITE:PS50081 PROSITE:PS51038
SMART:SM00109 SMART:SM00249 SMART:SM00439 PomBase:SPAC3H1.12c
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0044732
GO:GO:0035556 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006338 GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0048189 GO:GO:0019787
PIR:T38744 RefSeq:NP_593554.1 ProteinModelPortal:Q10077
STRING:Q10077 EnsemblFungi:SPAC3H1.12c.1 GeneID:2543443
KEGG:spo:SPAC3H1.12c OrthoDB:EOG4TF3TV NextBio:20804456
Uniprot:Q10077
Length = 1131
Score = 108 (43.1 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 28/95 (29%), Positives = 45/95 (47%)
Query: 23 IKPGDCVLMRPSEPSKPSYVAKIERIESDAR--GANV--KVHVRWYYRPEESIGGRRQFH 78
I+P D VL+ P +P +A+I E N+ V + WY+RP + +R
Sbjct: 105 IQPNDFVLVNSPFPGEPFQIARIISFEKSRPCVSTNLYDSVRLNWYFRPRDI---QRHLT 161
Query: 79 GSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTKLD 113
++ +F S H DI + +++ KCTV LD
Sbjct: 162 DTRLLFASMHSDIYNIGSVQEKCTVKHRSQIENLD 196
Score = 40 (19.1 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 14/51 (27%), Positives = 16/51 (31%)
Query: 113 DAVGNDDFFCRFEYNSSSGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCSDW 163
D N DF EY N CK + D VQC C +
Sbjct: 237 DLFKNYDFIVT-EYGKGRALLNEPSNCKVCKKWCAF---DFSVQCADCKKY 283
>TAIR|locus:2162117 [details] [associations]
symbol:AT5G55600 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038 SMART:SM00439
INTERPRO:IPR008395 EMBL:CP002688 GO:GO:0003677 Pfam:PF05641
InterPro:IPR014002 SMART:SM00743 UniGene:At.29433 UniGene:At.6552
EMBL:AF462815 EMBL:BT001005 IPI:IPI00518132 RefSeq:NP_001119443.1
RefSeq:NP_001190547.1 RefSeq:NP_200371.2 ProteinModelPortal:Q8W109
PRIDE:Q8W109 EnsemblPlants:AT5G55600.1 EnsemblPlants:AT5G55600.2
EnsemblPlants:AT5G55600.3 GeneID:835654 KEGG:ath:AT5G55600
TAIR:At5g55600 InParanoid:Q8W109 OMA:VPKQELA PhylomeDB:Q8W109
ProtClustDB:CLSN2690242 ArrayExpress:Q8W109 Genevestigator:Q8W109
Uniprot:Q8W109
Length = 663
Score = 108 (43.1 bits), Expect = 0.00070, P = 0.00070
Identities = 39/138 (28%), Positives = 60/138 (43%)
Query: 41 YVAKIERIESDARGANVKVHVRWYYRPEESIGG-RRQFHGSKEVFLSDHHDIQSADTIEG 99
YVA +E + D RG KV VRW++ +E G + KEVF++ H + SA+ ++G
Sbjct: 185 YVAYLEDMYEDKRGLK-KVKVRWFHYTKEVKGAVALKNPNPKEVFITPHSQVISAECVDG 243
Query: 100 KCTVHSFKSYTKLDAVGNDDFFCRFE--Y----NSSSGAFNPDRVAVY-------CKCEM 146
TV + + Y + A + R Y NS F+ ++ Y C M
Sbjct: 244 PATVLTREHYEECVASFPNSLLARVHMCYRQLRNSKVKPFDLSKLRGYLDQPIMSCLSSM 303
Query: 147 PYNPDDLMVQCEGCSDWS 164
P D + E +WS
Sbjct: 304 EAGPVDCAMNIEEDEEWS 321
>UNIPROTKB|J9NYK8 [details] [associations]
symbol:TNRC18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038 SMART:SM00439
GO:GO:0003677 GeneTree:ENSGT00530000063602 EMBL:AAEX03004306
EMBL:AAEX03004303 EMBL:AAEX03004304 EMBL:AAEX03004305
Ensembl:ENSCAFT00000042942 Uniprot:J9NYK8
Length = 2434
Score = 103 (41.3 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 3 KPKAPRRTLESYTVKSISKTIKPGDC-VLMRPSEPSKPSYVAKIERIESDARGANVKVHV 61
K KA R+ V+ + I+ GDC V + P+ P Y+ +I+ + ++ G+N+ V V
Sbjct: 2267 KGKA-RKLFYKAIVRG-KEMIRIGDCAVFLSAGRPNLP-YIGRIQSMW-ESWGSNMVVRV 2322
Query: 62 RWYYRPEESIGGRRQFHG 79
+W+Y PEE+ G+R G
Sbjct: 2323 KWFYHPEETSPGKRLHEG 2340
Score = 53 (23.7 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 19/75 (25%), Positives = 31/75 (41%)
Query: 74 RRQFHGSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTK-LDAVGNDD----FFCRFEYNS 128
R+ F + ++ S H D T+ KC V + Y + L D ++ Y
Sbjct: 2361 RKDFM-ERALYQSSHVDENDVQTVSHKCLVVGLEQYEQMLKTKKYQDSEGLYYLAGTYEP 2419
Query: 129 SSGA-FNPDRVAVYC 142
++G F+ D V V C
Sbjct: 2420 TTGMIFSTDGVPVLC 2434
>UNIPROTKB|B0QZZ2 [details] [associations]
symbol:PHF8 "Histone lysine demethylase PHF8" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AL589872 EMBL:AL732374
EMBL:Z98051 UniGene:Hs.731707 HGNC:HGNC:20672 ChiTaRS:PHF8
IPI:IPI00879803 SMR:B0QZZ2 Ensembl:ENST00000437224
HOGENOM:HOG000197780 HOVERGEN:HBG097304 Uniprot:B0QZZ2
Length = 115
Score = 86 (35.3 bits), Expect = 0.00080, P = 0.00080
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 138 VAVYCKCEMPYNPDDLMVQCEGCSDW 163
V VYC C +PY+ M++C+ C DW
Sbjct: 4 VPVYCLCRLPYDVTRFMIECDMCQDW 29
>UNIPROTKB|B0QZZ4 [details] [associations]
symbol:PHF8 "Histone lysine demethylase PHF8" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AL589872 EMBL:AL732374
EMBL:Z98051 UniGene:Hs.731707 HGNC:HGNC:20672 ChiTaRS:PHF8
IPI:IPI00879292 SMR:B0QZZ4 Ensembl:ENST00000433120
Ensembl:ENST00000445025 Uniprot:B0QZZ4
Length = 97
Score = 86 (35.3 bits), Expect = 0.00080, P = 0.00080
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 138 VAVYCKCEMPYNPDDLMVQCEGCSDW 163
V VYC C +PY+ M++C+ C DW
Sbjct: 4 VPVYCLCRLPYDVTRFMIECDMCQDW 29
>UNIPROTKB|Q5JPR8 [details] [associations]
symbol:PHF8 "Histone lysine demethylase PHF8" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AL589872 EMBL:AL732374
EMBL:Z98051 UniGene:Hs.731707 HGNC:HGNC:20672 ChiTaRS:PHF8
HOGENOM:HOG000197780 HOVERGEN:HBG097304 IPI:IPI00645913 SMR:Q5JPR8
Ensembl:ENST00000415025 Uniprot:Q5JPR8
Length = 114
Score = 86 (35.3 bits), Expect = 0.00080, P = 0.00080
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 138 VAVYCKCEMPYNPDDLMVQCEGCSDW 163
V VYC C +PY+ M++C+ C DW
Sbjct: 4 VPVYCLCRLPYDVTRFMIECDMCQDW 29
>UNIPROTKB|K7GQN1 [details] [associations]
symbol:PHF8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00550000074396 EMBL:FP015844
Ensembl:ENSSSCT00000034159 Uniprot:K7GQN1
Length = 97
Score = 86 (35.3 bits), Expect = 0.00080, P = 0.00080
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 138 VAVYCKCEMPYNPDDLMVQCEGCSDW 163
V VYC C +PY+ M++C+ C DW
Sbjct: 4 VPVYCLCRLPYDVTRFMIECDMCQDW 29
>UNIPROTKB|F1PWZ6 [details] [associations]
symbol:TNRC18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038 SMART:SM00439
GO:GO:0003677 GeneTree:ENSGT00530000063602 EMBL:AAEX03004306
EMBL:AAEX03004303 EMBL:AAEX03004304 EMBL:AAEX03004305
Ensembl:ENSCAFT00000025446 Uniprot:F1PWZ6
Length = 2674
Score = 103 (41.3 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 3 KPKAPRRTLESYTVKSISKTIKPGDC-VLMRPSEPSKPSYVAKIERIESDARGANVKVHV 61
K KA R+ V+ + I+ GDC V + P+ P Y+ +I+ + ++ G+N+ V V
Sbjct: 2507 KGKA-RKLFYKAIVRG-KEMIRIGDCAVFLSAGRPNLP-YIGRIQSMW-ESWGSNMVVRV 2562
Query: 62 RWYYRPEESIGGRRQFHG 79
+W+Y PEE+ G+R G
Sbjct: 2563 KWFYHPEETSPGKRLHEG 2580
Score = 53 (23.7 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 19/75 (25%), Positives = 31/75 (41%)
Query: 74 RRQFHGSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTK-LDAVGNDD----FFCRFEYNS 128
R+ F + ++ S H D T+ KC V + Y + L D ++ Y
Sbjct: 2601 RKDFM-ERALYQSSHVDENDVQTVSHKCLVVGLEQYEQMLKTKKYQDSEGLYYLAGTYEP 2659
Query: 129 SSGA-FNPDRVAVYC 142
++G F+ D V V C
Sbjct: 2660 TTGMIFSTDGVPVLC 2674
>UNIPROTKB|J9P0Q6 [details] [associations]
symbol:TNRC18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001025 Pfam:PF01426 PROSITE:PS51038 SMART:SM00439
GO:GO:0003677 GeneTree:ENSGT00530000063602 OMA:KRLHEGQ
EMBL:AAEX03004306 EMBL:AAEX03004303 EMBL:AAEX03004304
EMBL:AAEX03004305 Ensembl:ENSCAFT00000047576 Uniprot:J9P0Q6
Length = 2762
Score = 103 (41.3 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 3 KPKAPRRTLESYTVKSISKTIKPGDC-VLMRPSEPSKPSYVAKIERIESDARGANVKVHV 61
K KA R+ V+ + I+ GDC V + P+ P Y+ +I+ + ++ G+N+ V V
Sbjct: 2595 KGKA-RKLFYKAIVRG-KEMIRIGDCAVFLSAGRPNLP-YIGRIQSMW-ESWGSNMVVRV 2650
Query: 62 RWYYRPEESIGGRRQFHG 79
+W+Y PEE+ G+R G
Sbjct: 2651 KWFYHPEETSPGKRLHEG 2668
Score = 53 (23.7 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 19/75 (25%), Positives = 31/75 (41%)
Query: 74 RRQFHGSKEVFLSDHHDIQSADTIEGKCTVHSFKSYTK-LDAVGNDD----FFCRFEYNS 128
R+ F + ++ S H D T+ KC V + Y + L D ++ Y
Sbjct: 2689 RKDFM-ERALYQSSHVDENDVQTVSHKCLVVGLEQYEQMLKTKKYQDSEGLYYLAGTYEP 2747
Query: 129 SSGA-FNPDRVAVYC 142
++G F+ D V V C
Sbjct: 2748 TTGMIFSTDGVPVLC 2762
>UNIPROTKB|Q92072 [details] [associations]
symbol:DNMT1 "DNA (cytosine-5)-methyltransferase 1"
species:9031 "Gallus gallus" [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003886 "DNA (cytosine-5-)-methyltransferase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR002857 InterPro:IPR010506
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
Pfam:PF02008 Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058
SMART:SM00439 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 KO:K00558 GO:GO:0003886
PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047 CTD:1786
HOVERGEN:HBG051384 EMBL:D43920 IPI:IPI00588424 PIR:JC4172
RefSeq:NP_996835.1 UniGene:Gga.1206 ProteinModelPortal:Q92072
REBASE:3020 PRIDE:Q92072 GeneID:396011 KEGG:gga:396011
NextBio:20816074 Uniprot:Q92072
Length = 1537
Score = 110 (43.8 bits), Expect = 0.00095, P = 0.00095
Identities = 25/84 (29%), Positives = 42/84 (50%)
Query: 20 SKTIKPGDCVLMRPSEPSKPSYVAKIERIESDARGANVKVHVRWYYRPEESIGGRRQFHG 79
S+T++ GDCV + P +P+KP Y+A++ + D+ G H W+ +++ G
Sbjct: 666 SETLEVGDCVSVSPDDPTKPLYLARVTAMWEDSSGQ--MFHAHWFCPGSDTVLGATS--D 721
Query: 80 SKEVFLSDHHDIQSADTIEGKCTV 103
E+FL D + I GK V
Sbjct: 722 PLELFLVDECEDMQLSYIHGKVNV 745
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 164 164 0.00088 107 3 11 22 0.39 32
30 0.45 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 56
No. of states in DFA: 603 (64 KB)
Total size of DFA: 176 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.84u 0.11s 14.95t Elapsed: 00:00:01
Total cpu time: 14.85u 0.11s 14.96t Elapsed: 00:00:01
Start: Fri May 10 14:07:28 2013 End: Fri May 10 14:07:29 2013