BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031165
(164 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FDZ9|RL212_ARATH 60S ribosomal protein L21-2 OS=Arabidopsis thaliana GN=RPL21E PE=2
SV=1
Length = 164
Score = 316 bits (809), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 148/164 (90%), Positives = 159/164 (96%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
MPAGHG+R+RTRDLFARPFRKKGYIPLSTYLRT+K+GDYVDVKVNGA+HKGMPHKFYHGR
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60
Query: 61 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAK 120
TGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHVQ SRC EEFKLRKK+ND LKADAK
Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAK 120
Query: 121 ARGEVISTKRQPKGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164
ARGE ISTKRQPKGPKPGFMVEG TLETVTPIPYDVVNDLKGGY
Sbjct: 121 ARGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
>sp|Q43291|RL211_ARATH 60S ribosomal protein L21-1 OS=Arabidopsis thaliana GN=RPL21A PE=2
SV=2
Length = 164
Score = 315 bits (807), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 148/164 (90%), Positives = 158/164 (96%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
MPAGHG+R+RTRDLFARPFRKKGYIPLSTYLRT+K+GDYVDVKVNGA+HKGMPHKFYHGR
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60
Query: 61 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAK 120
TGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHVQ SRC EEFKLRKKKNDELKA AK
Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAK 120
Query: 121 ARGEVISTKRQPKGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164
A GE ISTKRQPKGPKPGFMVEG TLETVTPIPYDVVNDLKGGY
Sbjct: 121 ANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
>sp|O82574|RL21_CYAPA 60S ribosomal protein L21 OS=Cyanophora paradoxa GN=RPL21 PE=2 SV=1
Length = 161
Score = 176 bits (445), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 115/158 (72%), Gaps = 3/158 (1%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
MP +G R+RTR LFAR F+ G + LSTYL +KIG+YVDV N AVHKGMP K+YHGR
Sbjct: 1 MPHSYGYRARTRALFARAFKTNGPVHLSTYLTNFKIGEYVDVVGNAAVHKGMPFKYYHGR 60
Query: 61 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAK 120
TG VWNVTKRAIGVEINK+V +RIIKKRIHVR++HV+ S C + F R K+ND++K DA
Sbjct: 61 TGIVWNVTKRAIGVEINKRVRHRIIKKRIHVRIDHVKKSSCRDSFLKRVKENDKIKHDAH 120
Query: 121 -ARGEVISTKRQPKGPKPGFMV--EGATLETVTPIPYD 155
A+ V STKR P PK G ++ +G ET IPY+
Sbjct: 121 VAKLPVPSTKRLPVLPKAGAIIKSKGQVPETCHAIPYE 158
>sp|Q02753|RL21A_YEAST 60S ribosomal protein L21-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL21A PE=1 SV=1
Length = 160
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 113/157 (71%), Gaps = 2/157 (1%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
M HG RSRTR +F R FRK G + LSTYL+ YK+GD VD+K NG++ KGMPHKFY G+
Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFYQGK 60
Query: 61 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAK 120
TG V+NVTK ++GV INK VGNR ++KR+++RVEH++ S+C +EF R K N +A+AK
Sbjct: 61 TGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAK 120
Query: 121 ARGEVISTKRQPKGPKPGFMV--EGATLETVTPIPYD 155
A+G + KRQP P+ +V EG +T+ P+PY+
Sbjct: 121 AQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157
>sp|Q12672|RL21B_YEAST 60S ribosomal protein L21-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL21B PE=1 SV=1
Length = 160
Score = 173 bits (438), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 113/157 (71%), Gaps = 2/157 (1%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
M HG RSRTR +F R FRK G + +STYL+ YK+GD VD+K NG++ KGMPHKFY G+
Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHMSTYLKIYKVGDIVDIKANGSIQKGMPHKFYQGK 60
Query: 61 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAK 120
TG V+NVTK ++GV INK VGNR ++KR+++RVEH++ S+C +EF R K N +A+AK
Sbjct: 61 TGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAK 120
Query: 121 ARGEVISTKRQPKGPKPGFMV--EGATLETVTPIPYD 155
A+G + KRQP P+ +V EG +T+ P+PY+
Sbjct: 121 AQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157
>sp|Q54X53|RL21_DICDI 60S ribosomal protein L21 OS=Dictyostelium discoideum GN=rpl21 PE=3
SV=1
Length = 160
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 108/159 (67%), Gaps = 2/159 (1%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
MP GLR+RTR LF+R FR G + +T+LRT+++GDYVD+K G VHKGMPHKFYHGR
Sbjct: 1 MPHSFGLRARTRYLFSRGFRNHGLLQTTTFLRTFRLGDYVDIKATGNVHKGMPHKFYHGR 60
Query: 61 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAK 120
TGRVWNVT RA+GV INK+VG RII K+IHVR EHV+PS R ++N + +AK
Sbjct: 61 TGRVWNVTPRAVGVIINKRVGPRIIAKKIHVRTEHVKPSNSMAAHLKRIQENKKAVVEAK 120
Query: 121 ARGEVISTKRQPKGPKPGFMVEGATLE--TVTPIPYDVV 157
G+ + +R P PK GF V E V P+ Y+++
Sbjct: 121 KAGKWVDVRRNPAAPKDGFFVNPRNTEFVEVKPVKYELL 159
>sp|O42706|RL21B_SCHPO 60S ribosomal protein L21-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl21b PE=2 SV=2
Length = 160
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 112/157 (71%), Gaps = 2/157 (1%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
MP +G+R+RTR F R FR+ G I LSTYL+TYK+GD VD+KVNGAV KGMPHK+YHG+
Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGK 60
Query: 61 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAK 120
TG V+NVT+ ++GV I K VGNR ++KR++VR+EHV+ S+C ++F R K N+ + +AK
Sbjct: 61 TGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAK 120
Query: 121 ARGEVISTKRQPKGPKPGFMVEGATLETVT--PIPYD 155
A+G+ + +RQP P V E VT P+ YD
Sbjct: 121 AQGKTVQLRRQPAPPATAHFVSTENNEPVTLHPVAYD 157
>sp|Q9UUC1|RL21A_SCHPO 60S ribosomal protein L21-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl21a PE=3 SV=1
Length = 160
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 112/157 (71%), Gaps = 2/157 (1%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
MP +G+R+RTR F R FR+ G I LSTYL+TYK+GD VD+KVNGAV KGMPHK+YHG+
Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGK 60
Query: 61 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAK 120
TG V+NVT+ ++GV I K VGNR ++KR++VR+EHV+ S+C ++F R K N+ + +AK
Sbjct: 61 TGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAK 120
Query: 121 ARGEVISTKRQPKGPKPGFMVEGATLETVT--PIPYD 155
A+G+ + +RQP P V E VT P+ YD
Sbjct: 121 AQGKTVQLRRQPAPPAKAHFVSTENNEPVTLHPVAYD 157
>sp|P46778|RL21_HUMAN 60S ribosomal protein L21 OS=Homo sapiens GN=RPL21 PE=1 SV=2
Length = 160
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 107/159 (67%), Gaps = 2/159 (1%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
M G R TR +F+RPFRK G +PL+TY+R YK GD VD+K G V KGMPHK YHG+
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 61 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAK 120
TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R K+ND+ K +AK
Sbjct: 61 TGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 121 ARGEVISTKRQPKGPKPGFMV--EGATLETVTPIPYDVV 157
+G + KRQP P+ V G E + PIPY+ +
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFM 159
>sp|Q6QN05|RL21_CHILA 60S ribosomal protein L21 OS=Chinchilla lanigera GN=RPL21 PE=2 SV=3
Length = 160
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 107/159 (67%), Gaps = 2/159 (1%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
M G R TR +F+RP+RK G +PL+TY+R YK GD VD+K G V KGMPHK YHG+
Sbjct: 1 MTNTKGKRRGTRYMFSRPYRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 61 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAK 120
TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R K+ND+ K +AK
Sbjct: 61 TGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 121 ARGEVISTKRQPKGPKPGFMV--EGATLETVTPIPYDVV 157
+G + KRQP P+ V G E + PIPY+ +
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFM 159
>sp|A5JSS2|RL21_CAPHI 60S ribosomal protein L21 OS=Capra hircus GN=RPL21 PE=2 SV=1
Length = 160
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 107/159 (67%), Gaps = 2/159 (1%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
M G R TR +F+RPFRK G +PL+TY+R Y+ GD VD+K G V KGMPHK YHG+
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYRKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 61 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAK 120
TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R K+ND+ K +AK
Sbjct: 61 TGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 121 ARGEVISTKRQPKGPKPGFMV--EGATLETVTPIPYDVV 157
+G + KRQP P+ V G E + PIPY+ +
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFM 159
>sp|P20280|RL21_RAT 60S ribosomal protein L21 OS=Rattus norvegicus GN=Rpl21 PE=1 SV=3
Length = 160
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 105/159 (66%), Gaps = 2/159 (1%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
M G R TR +F+RPFRK G +PL+TY+R YK GD VD+K G V KGMPHK YHG+
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 61 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAK 120
TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R K+ND+ K +AK
Sbjct: 61 TGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 121 ARGEVISTKRQPKGPKPGFMV--EGATLETVTPIPYDVV 157
+G + QP P+ V G E + PIPY+ +
Sbjct: 121 EKGTWVQLNGQPAPPREAHFVRTNGKEPELLEPIPYEFM 159
>sp|O09167|RL21_MOUSE 60S ribosomal protein L21 OS=Mus musculus GN=Rpl21 PE=2 SV=3
Length = 160
Score = 150 bits (378), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 105/159 (66%), Gaps = 2/159 (1%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
M G R TR +F+RPFRK G +PL+TY+R YK GD VD+K G V KGMPHK YHG+
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 61 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAK 120
TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R K+ND+ K +AK
Sbjct: 61 TGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 121 ARGEVISTKRQPKGPKPGFMV--EGATLETVTPIPYDVV 157
+G + KR P+ V G E + PIPY+ +
Sbjct: 121 EKGTWVQLKRHAAPPREAHFVRTNGKEPELLEPIPYEFM 159
>sp|Q23TC8|RL21_TETTS 60S ribosomal protein L21 OS=Tetrahymena thermophila (strain SB210)
GN=RPL21 PE=1 SV=3
Length = 157
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 98/144 (68%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
M +G R +TR FA+ ++ KG++ +S YL TYK+G+YVD+ V+G+ HKGMP+K YHGR
Sbjct: 1 MTHSYGYRRQTRKKFAKAYKTKGHVRISRYLTTYKVGEYVDIMVDGSQHKGMPYKLYHGR 60
Query: 61 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAK 120
TG+V+NV R+IGV +++ V R I+KR+HV++EHV+PS R + ND+ KA+
Sbjct: 61 TGKVFNVNPRSIGVIVHRIVNGRYIEKRLHVKIEHVRPSNVKTALSKRYQANDQAKAEGN 120
Query: 121 ARGEVISTKRQPKGPKPGFMVEGA 144
G+ +STKR P P V+GA
Sbjct: 121 KAGKRVSTKRNPGQPLEAVQVQGA 144
>sp|P38653|RL21_ENTHI 60S ribosomal protein L21 OS=Entamoeba histolytica GN=RPL21 PE=2
SV=2
Length = 166
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 104/164 (63%), Gaps = 10/164 (6%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
MP +G RTR LF RPFR G ST L TYK+GDYV + N ++ G+P+K +HG+
Sbjct: 1 MPLSNGRNRRTRKLFKRPFRGHGLSNTSTILHTYKVGDYVTILCNSSIQHGLPYKAFHGK 60
Query: 61 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRK-------KKND 113
TGRVWNV AIGV +NK+V NRI+ KR+H+ EH++PS C ++F RK K+N
Sbjct: 61 TGRVWNVNPHAIGVMVNKKVNNRIVVKRLHISPEHIRPSGCQKDFLERKAAVAAIRKQNI 120
Query: 114 ELKADAKARGEVISTKRQPKGPKPGFMVEGATLE--TVTPIPYD 155
+LK + K + KR PK P+P +++GA ++ TV P+ ++
Sbjct: 121 QLKKEGKPLLP-LPAKRLPKQPRPAELIKGADIKFTTVAPLKFE 163
>sp|P34334|RL21_CAEEL 60S ribosomal protein L21 OS=Caenorhabditis elegans GN=rpl-21 PE=1
SV=3
Length = 161
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 103/160 (64%), Gaps = 3/160 (1%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
M GLR TR +FAR FRK G LSTY YK GD VD+K NGA KGMP K YHGR
Sbjct: 1 MTNSKGLRRGTRYMFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHGR 60
Query: 61 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAK 120
TGR++NVT+ A+G+ +NK+V I+ KRI++R+EH++PS+C +F R K NDE + AK
Sbjct: 61 TGRIFNVTRGAVGIIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAAK 120
Query: 121 ARGE-VISTKRQPKGPKPGFMV--EGATLETVTPIPYDVV 157
+ G+ V + KR P P+ V + E + P+ +++V
Sbjct: 121 SAGQPVPALKRLPVAPRGAHTVTTQNNEPELLAPLRFEIV 160
>sp|P49667|RL21_PYUST 60S ribosomal protein L21 (Fragment) OS=Pyura stolonifera GN=RPL21
PE=2 SV=2
Length = 156
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 101/147 (68%), Gaps = 1/147 (0%)
Query: 10 RTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTK 69
R D+F++ FR++G IPL+ YL YK GD VD+K +G+V K PHK YHG+TGR++NVT+
Sbjct: 9 RGSDMFSKKFRERGAIPLNKYLTVYKKGDIVDIKGDGSVQKVCPHKVYHGKTGRIFNVTQ 68
Query: 70 RAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGEVISTK 129
A+G+ +NKQV RII KRI+VR+EH++ S+ F R +N+ + +A+ + ++ K
Sbjct: 69 HAVGIIVNKQVRGRIIAKRINVRIEHIKHSKSRISFIQRVHENERKRKEAREKKIRVNLK 128
Query: 130 RQPKGPKPG-FMVEGATLETVTPIPYD 155
RQP+ P+ G F+ A E V PIPY+
Sbjct: 129 RQPQQPRTGHFVRSSAEPELVEPIPYE 155
>sp|Q8SRW8|RL21_ENCCU 60S ribosomal protein L21 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL21 PE=3 SV=1
Length = 160
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 98/148 (66%), Gaps = 4/148 (2%)
Query: 6 GLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVW 65
G R TR LF++ RK G +S YL Y+IGD VD+ VN A+ KGMPHK+YHGRTGRV+
Sbjct: 5 GYRRGTRYLFSQDHRKHGVAHVSKYLEKYEIGDMVDILVNPAMMKGMPHKYYHGRTGRVY 64
Query: 66 NVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGEV 125
+V R++ V + K+V + + K+I VR+EHV+ SRC+EE + R E+ DA++RG V
Sbjct: 65 DVKPRSLNVALYKRVRGKYVIKKIIVRIEHVRKSRCSEESQKRILMAAEMARDAESRGVV 124
Query: 126 IS-TKRQPKGPKPGFMVEGATLETVTPI 152
++ +KR+ +GP+ V +L+ PI
Sbjct: 125 LAPSKRKIEGPRKAVEV---SLDNNQPI 149
>sp|P49666|RL21_PIG 60S ribosomal protein L21 (Fragment) OS=Sus scrofa GN=RPL21 PE=3
SV=2
Length = 62
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 43/57 (75%)
Query: 6 GLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTG 62
G R TR +F+RPFRK G +PL+TY+R YK GD VD+K G V KG+PHK YHG+TG
Sbjct: 6 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGLPHKCYHGKTG 62
>sp|A3DML6|RL21_STAMF 50S ribosomal protein L21e OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=rpl21e PE=3 SV=1
Length = 99
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 64/100 (64%), Gaps = 5/100 (5%)
Query: 3 AGHGLRSRTRDLFARPFRKKGYIP-LSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRT 61
A G R RTR +F++ R+KG +P LS + YK GD V + VN A+HKGMPH+ YHG+T
Sbjct: 4 APRGYRHRTRKVFSKHIREKGAVPPLSLLMIDYKPGDKVHIVVNPAIHKGMPHRRYHGKT 63
Query: 62 GRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRC 101
G + +A V+I +G++ +K + +R EH++P++
Sbjct: 64 GTIIGKRGKAYIVKIT--LGDK--EKTLFIRPEHLRPAKA 99
>sp|Q4JB11|RL21_SULAC 50S ribosomal protein L21e OS=Sulfolobus acidocaldarius (strain
ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB
11770) GN=rpl21e PE=3 SV=1
Length = 103
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 5/94 (5%)
Query: 6 GLRSRTRDLFARPFRKKGYIP-LSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRV 64
G RS+TR L + R+KG IP LS + Y G+YV VK+N ++HKGMPH+ YHG+ G V
Sbjct: 7 GYRSKTRKLLEKKVREKGAIPKLSLLMHDYSQGEYVVVKINPSIHKGMPHRRYHGKVGLV 66
Query: 65 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQP 98
V KR E+ +G++ ++ + VR EH+ P
Sbjct: 67 --VGKRGKAYEVKVNIGDK--ERVLIVRPEHLIP 96
>sp|A0B7V4|RL21_METTP 50S ribosomal protein L21e OS=Methanosaeta thermophila (strain
DSM 6194 / PT) GN=rpl21e PE=3 SV=1
Length = 96
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
MP HG R TRD + R++G P+ ++ + +G+ V + ++ ++HKGMPH +HGR
Sbjct: 1 MPKSHGFRKNTRDKLKKSVRERGISPVVRAIQDFAVGEKVHIIIDPSIHKGMPHPKFHGR 60
Query: 61 TGRVWNVTKRAIGVEINKQVGNRII 85
TG V RA +E+ Q +++
Sbjct: 61 TGTVVGRRGRAYVLEVPDQSAKKLV 85
>sp|P58077|RL21_AERPE 50S ribosomal protein L21e OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl21e
PE=3 SV=1
Length = 107
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Query: 3 AGHGLRSRTRDLFARPFRKKGYIP-LSTYLRTYKIGDYVDVKVNGAVHK-GMPHKFYHGR 60
A G R+RTR L +P R+KG IP LSTYLR Y++GD V + +N + GMPH+ +HG
Sbjct: 4 APRGYRNRTRRLLRKPVREKGSIPRLSTYLREYRVGDKVAIIINPSFPDWGMPHRRFHGL 63
Query: 61 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEE 104
TG V V KR E+ +G + +K + V H++P E
Sbjct: 64 TGTV--VGKRGEAYEVEVYLGRK--RKTLFVPPVHLKPLSTAAE 103
>sp|Q975F2|RL21_SULTO 50S ribosomal protein L21e OS=Sulfolobus tokodaii (strain DSM
16993 / JCM 10545 / NBRC 100140 / 7) GN=rpl21e PE=3
SV=1
Length = 103
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 5/92 (5%)
Query: 6 GLRSRTRDLFARPFRKKGYIP-LSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRV 64
G R+RTR L + R++G +P LS + +K GDYV +K+N +VHKGMPH+ YHG+ G +
Sbjct: 7 GYRTRTRKLLTKNVRERGAVPRLSLLMEEFKEGDYVVIKINPSVHKGMPHRRYHGKVGVI 66
Query: 65 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 96
+A V + +G++ +K I VR EH+
Sbjct: 67 QGKRGKAYIVRVT--LGDK--EKVIIVRPEHL 94
>sp|Q9UXE0|RL21_SULSO 50S ribosomal protein L21e OS=Sulfolobus solfataricus (strain
ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=rpl21e PE=3
SV=1
Length = 101
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Query: 6 GLRSRTRDLFARPFRKKGYIP-LSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRV 64
G R+R+R L + R++G +P LS + YK GD V VK+N +VH+GMPH+ Y G+ G++
Sbjct: 7 GYRTRSRSLLRKSPRERGAVPSLSKLMVEYKEGDNVVVKINPSVHQGMPHRRYQGKVGKI 66
Query: 65 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQP 98
RA V + +G++ +K I VR EH+ P
Sbjct: 67 IGKRGRAYLVSVT--LGDK--EKVIIVRPEHLVP 96
>sp|P54013|RL21_METJA 50S ribosomal protein L21e OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 /
NBRC 100440) GN=rpl21e PE=3 SV=2
Length = 98
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%)
Query: 6 GLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVW 65
G R +TR ++ R++G P++ LR +K G+YV + ++ +VHKGMPH +HGRTG V
Sbjct: 7 GFRRKTRKKLSKHPRERGLYPITRALREFKEGEYVHIVIDPSVHKGMPHPRFHGRTGIVV 66
Query: 66 NVTKRAIGVEI 76
RA V++
Sbjct: 67 GKQGRAFIVKV 77
>sp|A6UR83|RL21_METVS 50S ribosomal protein L21e OS=Methanococcus vannielii (strain SB
/ ATCC 35089 / DSM 1224) GN=rpl21e PE=3 SV=1
Length = 97
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
M G RS+TR ++ R+KG PL+ L+ Y GD V V ++ +V KGMPH +HG+
Sbjct: 1 MQKSEGFRSKTRYKLSKHPRQKGLFPLTRALKCYTEGDTVHVVIDPSVQKGMPHPKFHGK 60
Query: 61 TGRVWNVTKRAIGVEIN 77
TG V + RA V +
Sbjct: 61 TGTVVSQRGRAFLVRVK 77
>sp|Q8TUU3|RL21_METKA 50S ribosomal protein L21e OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl21e PE=3 SV=1
Length = 102
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 6 GLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVW 65
G RSRTR + R++G PL + ++ G V + ++ +VHKGMPH YHGRTG V
Sbjct: 7 GFRSRTRKKLRKKPRERGLSPLGPMTQEFEEGQKVHIVIDPSVHKGMPHPRYHGRTGEVV 66
Query: 66 NVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTE 103
RA V+I G + +K++ V EH++P E
Sbjct: 67 GRQGRAYIVKIRD--GGK--EKKLIVYPEHLKPQEQPE 100
>sp|C3NEB3|RL21_SULIY 50S ribosomal protein L21e OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=rpl21e PE=3 SV=1
Length = 101
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 6 GLRSRTRDLFARPFRKKGYIP-LSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRV 64
G R+R+R L + R++G +P LS + YK GD V +K+N +VH GMPH+ Y G+ G++
Sbjct: 7 GYRTRSRSLLRKSPRERGAVPSLSRLMVEYKEGDKVVIKINPSVHSGMPHRRYQGKVGKI 66
Query: 65 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 96
RA V + +G++ +K I VR EH+
Sbjct: 67 IGKRGRAYLVSVT--LGDK--QKVIIVRPEHL 94
>sp|C3NHD9|RL21_SULIN 50S ribosomal protein L21e OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=rpl21e PE=3 SV=1
Length = 101
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 6 GLRSRTRDLFARPFRKKGYIP-LSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRV 64
G R+R+R L + R++G +P LS + YK GD V +K+N +VH GMPH+ Y G+ G++
Sbjct: 7 GYRTRSRSLLRKSPRERGAVPSLSRLMVEYKEGDKVVIKINPSVHSGMPHRRYQGKVGKI 66
Query: 65 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 96
RA V + +G++ +K I VR EH+
Sbjct: 67 IGKRGRAYLVSVT--LGDK--EKVIIVRPEHL 94
>sp|C3MVE8|RL21_SULIM 50S ribosomal protein L21e OS=Sulfolobus islandicus (strain
M.14.25 / Kamchatka #1) GN=rpl21e PE=3 SV=1
Length = 101
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 6 GLRSRTRDLFARPFRKKGYIP-LSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRV 64
G R+R+R L + R++G +P LS + YK GD V +K+N +VH GMPH+ Y G+ G++
Sbjct: 7 GYRTRSRSLLRKSPRERGAVPSLSRLMVEYKEGDKVVIKINPSVHSGMPHRRYQGKVGKI 66
Query: 65 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 96
RA V + +G++ +K I VR EH+
Sbjct: 67 IGKRGRAYLVSVT--LGDK--EKVIIVRPEHL 94
>sp|C3MQ30|RL21_SULIL 50S ribosomal protein L21e OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=rpl21e PE=3 SV=1
Length = 101
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 6 GLRSRTRDLFARPFRKKGYIP-LSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRV 64
G R+R+R L + R++G +P LS + YK GD V +K+N +VH GMPH+ Y G+ G++
Sbjct: 7 GYRTRSRSLLRKSPRERGAVPSLSRLMVEYKEGDKVVIKINPSVHSGMPHRRYQGKVGKI 66
Query: 65 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 96
RA V + +G++ +K I VR EH+
Sbjct: 67 IGKRGRAYLVSVT--LGDK--EKVIIVRPEHL 94
>sp|C4KHC6|RL21_SULIK 50S ribosomal protein L21e OS=Sulfolobus islandicus (strain
M.16.4 / Kamchatka #3) GN=rpl21e PE=3 SV=1
Length = 101
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 6 GLRSRTRDLFARPFRKKGYIP-LSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRV 64
G R+R+R L + R++G +P LS + YK GD V +K+N +VH GMPH+ Y G+ G++
Sbjct: 7 GYRTRSRSLLRKSPRERGAVPSLSRLMVEYKEGDKVVIKINPSVHSGMPHRRYQGKVGKI 66
Query: 65 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 96
RA V + +G++ +K I VR EH+
Sbjct: 67 IGKRGRAYLVSVT--LGDK--EKVIIVRPEHL 94
>sp|C3N5P7|RL21_SULIA 50S ribosomal protein L21e OS=Sulfolobus islandicus (strain
M.16.27) GN=rpl21e PE=3 SV=1
Length = 101
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 6 GLRSRTRDLFARPFRKKGYIP-LSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRV 64
G R+R+R L + R++G +P LS + YK GD V +K+N +VH GMPH+ Y G+ G++
Sbjct: 7 GYRTRSRSLLRKSPRERGAVPSLSRLMVEYKEGDKVVIKINPSVHSGMPHRRYQGKVGKI 66
Query: 65 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 96
RA V + +G++ +K I VR EH+
Sbjct: 67 IGKRGRAYLVSVT--LGDK--EKVIIVRPEHL 94
>sp|Q0W2E9|RL21_UNCMA 50S ribosomal protein L21e OS=Uncultured methanogenic archaeon RC-I
GN=rpl21e PE=3 SV=1
Length = 99
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
M HG R +TR F + R +G P+S ++ +++G V + ++ +VHKGMP++ + G
Sbjct: 1 MARSHGERLKTRHKFNKDLRARGLSPVSKAVQEFEVGQKVHIDIDPSVHKGMPYRRFQGL 60
Query: 61 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCT 102
TG + RA V I+ G + KK + R +H++P + +
Sbjct: 61 TGEILGQAGRAWFVGISD--GGK--KKTVIARSQHLKPQKNS 98
>sp|A3CWY7|RL21_METMJ 50S ribosomal protein L21e OS=Methanoculleus marisnigri (strain
ATCC 35101 / DSM 1498 / JR1) GN=rpl21e PE=3 SV=1
Length = 97
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
M +G R +TR F + RK+G P+++ +++++IG V V V +V KGMPH+ +HG+
Sbjct: 1 MAHHNGPRKKTRYKFKKDLRKRGIPPVTSVIQSFEIGQRVHVVVEPSVQKGMPHRRFHGK 60
Query: 61 TGRVWNVTKRAIGVEI 76
TG V RA +E+
Sbjct: 61 TGTVIGQRGRAWLLEV 76
>sp|Q12XH4|RL21_METBU 50S ribosomal protein L21e OS=Methanococcoides burtonii (strain DSM
6242) GN=rpl21e PE=3 SV=1
Length = 97
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
MP HG RS TR + R++G P+S ++ ++ G V + ++ +V KGMP+ + G+
Sbjct: 1 MPTSHGERSCTRYKLKKTVRERGLSPISKAIQDFEEGQMVHIDIDPSVQKGMPNAKFQGK 60
Query: 61 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSR 100
TG+V RA +++ GN KK + +H++P +
Sbjct: 61 TGKVLGKRGRAYLLQVTD--GNS--KKEVISLSQHLKPQK 96
>sp|B8GEV3|RL21_METPE 50S ribosomal protein L21e OS=Methanosphaerula palustris (strain
ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rpl21e PE=3 SV=1
Length = 96
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 46/76 (60%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
M +G R +TR F + RK+G +P+++ ++ ++IG V + ++ KGMPH+ +HG+
Sbjct: 1 MAHHNGPRKKTRYKFKKDLRKRGIVPVTSLIQHFEIGQSVHIVCEPSIQKGMPHRRFHGK 60
Query: 61 TGRVWNVTKRAIGVEI 76
TG+V RA + I
Sbjct: 61 TGKVIGQRGRAWMLTI 76
>sp|A7I9H8|RL21_METB6 50S ribosomal protein L21e OS=Methanoregula boonei (strain 6A8)
GN=rpl21e PE=3 SV=1
Length = 96
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
M +G R +TR F + R++G P+++ ++ +++G+ V + VN +V KGMPH+ +HG
Sbjct: 1 MAHHNGPRKKTRYKFKKELRQRGLPPVTSVIQQFEVGEKVHIVVNSSVQKGMPHRRFHGL 60
Query: 61 TGRVWNVTKRAIGVEIN 77
TG V RA + I+
Sbjct: 61 TGTVIGKRGRAWMLTIH 77
>sp|Q6M125|RL21_METMP 50S ribosomal protein L21e OS=Methanococcus maripaludis (strain S2
/ LL) GN=rpl21e PE=3 SV=1
Length = 97
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
M G RS+TR + R+KG PL+ L+ Y GD V V ++ +V KGMPH +HG+
Sbjct: 1 MQKSEGFRSKTRYKLQKHPRQKGMAPLTRALKCYTEGDLVHVVLDPSVQKGMPHPKFHGK 60
Query: 61 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSR 100
TG V V +R + + G + K I R +H++ S+
Sbjct: 61 TGVV--VAQRGSSFLVRVKDGGKY--KDIIARPQHLRESK 96
>sp|Q2FS99|RL21_METHJ 50S ribosomal protein L21e OS=Methanospirillum hungatei (strain
JF-1 / DSM 864) GN=rpl21e PE=3 SV=1
Length = 97
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
M +G R +TR F + R +G +P++ ++ +++G V + ++ KGMPH+ +HG+
Sbjct: 1 MALHNGPRKKTRYKFKKDLRSRGVLPVTRVIQQFELGQKVHIVCEPSIQKGMPHRRFHGK 60
Query: 61 TGRVWNVTKRAIGVEINKQVGNR---IIKKRIHVRVEH 95
TG V RA VEI GN+ +I + H+R +
Sbjct: 61 TGSVVGQRGRAWLVEIRD--GNKFKTVISRPQHLRAQQ 96
>sp|A6VI82|RL21_METM7 50S ribosomal protein L21e OS=Methanococcus maripaludis (strain
C7 / ATCC BAA-1331) GN=rpl21e PE=3 SV=1
Length = 97
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
M G RS+TR + R+KG PL+ L+ Y GD V V ++ +V KGMPH +HG+
Sbjct: 1 MQKSEGFRSKTRYKLQKHPRQKGMAPLTRALKCYTEGDRVHVVLDPSVQKGMPHPKFHGK 60
Query: 61 TGRVWNVTKRAIGVEIN 77
TG V R+ V +
Sbjct: 61 TGVVVAQRGRSFLVRVK 77
>sp|A9A8J8|RL21_METM6 50S ribosomal protein L21e OS=Methanococcus maripaludis (strain
C6 / ATCC BAA-1332) GN=rpl21e PE=3 SV=1
Length = 97
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
M G RS+TR + R+KG PL+ L+ Y GD V V ++ +V KGMPH +HG+
Sbjct: 1 MQKSEGFRSKTRYKLQKHPRQKGMAPLTRALKCYTEGDRVHVVLDPSVQKGMPHPKFHGK 60
Query: 61 TGRVWNVTKRAIGVEIN 77
TG V R+ V +
Sbjct: 61 TGVVVAQRGRSFLVRVK 77
>sp|A4G096|RL21_METM5 50S ribosomal protein L21e OS=Methanococcus maripaludis (strain
C5 / ATCC BAA-1333) GN=rpl21e PE=3 SV=1
Length = 97
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
M G RS+TR + R+KG PL+ L+ Y GD V V ++ +V KGMPH +HG+
Sbjct: 1 MQKSEGFRSKTRYKLQKHPRQKGMAPLTRALKCYTEGDRVHVVLDPSVQKGMPHPKFHGK 60
Query: 61 TGRVWNVTKRAIGVEIN 77
TG + R+ V +
Sbjct: 61 TGVIVAQRGRSFLVRVK 77
>sp|Q8U217|RL21_PYRFU 50S ribosomal protein L21e OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rpl21e PE=1 SV=1
Length = 97
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 4 GHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGR 63
H R +TR ++ R++G PL+ +L+ +++G V + + + HKGMP +HGRTG
Sbjct: 5 AHSFRRKTRKKLSKHPRRRGLPPLTRFLQEFEVGQRVHIVIEPSYHKGMPDPRFHGRTGT 64
Query: 64 VWNVTKRAIGVEIN 77
V A VEI
Sbjct: 65 VVGKRGEAYIVEIK 78
>sp|Q2NE44|RL21_METST 50S ribosomal protein L21e OS=Methanosphaera stadtmanae (strain
DSM 3091) GN=rpl21e PE=3 SV=1
Length = 96
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
M G +SR+R R R K P+S ++ +++G+ V + V+ ++H+G PH +HG+
Sbjct: 1 MRKSKGFKSRSRYKLKRSIRPKRANPISRKIQVFEVGNKVHIIVDSSIHRGQPHPRFHGK 60
Query: 61 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQ 97
TG V +A V I GN+ K + +R EH++
Sbjct: 61 TGEVVGQKGKAYLVAIKD--GNKA--KELIIRPEHLK 93
>sp|A8AAK8|RL21_IGNH4 50S ribosomal protein L21e OS=Ignicoccus hospitalis (strain
KIN4/I / DSM 18386 / JCM 14125) GN=rpl21e PE=3 SV=1
Length = 99
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 3 AGHGLRSRTRDLFARPFRKKGYIP-LSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRT 61
A G R RTR ++ + R+KG +P LS L YK GD V + N A+ G+PH+ + G+
Sbjct: 4 APKGWRHRTRHIYRKRVREKGAVPPLSLVLIDYKPGDKVIIDPNPAIWSGLPHRRFCGKV 63
Query: 62 GRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQP 98
G V V KR + + G+ + K I VR EH++P
Sbjct: 64 GEV--VGKRGKAYLVKVRDGD--VYKTIIVRPEHLRP 96
>sp|A4YCT6|RL21_METS5 50S ribosomal protein L21e OS=Metallosphaera sedula (strain ATCC
51363 / DSM 5348) GN=rpl21e PE=3 SV=1
Length = 99
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 6 GLRSRTRDLFARPFRKKGYIP-LSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRV 64
G R+R+R L + R++G +P L + K G+ V +K+N + H GMPH+ Y G+ G +
Sbjct: 7 GNRTRSRKLLKKSPRERGAVPSLGRLMLDLKEGERVVIKINSSTHSGMPHRRYQGKVGTI 66
Query: 65 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 96
KR E+ ++G++ +K + VR EH+
Sbjct: 67 LG--KRGKSYEVKVKLGDK--EKILIVRPEHL 94
>sp|O27378|RL21_METTH 50S ribosomal protein L21e OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl21e PE=3 SV=1
Length = 96
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
Query: 6 GLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVW 65
G RS+TR + R P++ ++++ GD V + ++ ++H+G PH +HG+TGRV
Sbjct: 6 GFRSKTRHKLQKVKRPGRSNPITRKIQSFNEGDLVHIIIDPSIHRGQPHPRFHGKTGRVV 65
Query: 66 NVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQ 97
+ ++ V + GN+ K++ VR EH+Q
Sbjct: 66 GMMGKSYVVALKD--GNK--DKQLVVRPEHLQ 93
>sp|A6UT27|RL21_META3 50S ribosomal protein L21e OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rpl21e PE=3 SV=1
Length = 97
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 1 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60
M G RS TR + R KG P++ L+ ++ G V V ++ +V KGMPH +HG+
Sbjct: 1 MQKSEGFRSGTRYKLKKHPRAKGLYPITRALKQFENGQTVHVILDPSVQKGMPHPKFHGK 60
Query: 61 TGRVWNVTKRAIGVEI-NKQVGNRIIKKRIHVR 92
TG++ + VE+ + II + H+R
Sbjct: 61 TGKIIGQRGSSFIVEVKDGHATKEIIARPQHLR 93
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.139 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,127,592
Number of Sequences: 539616
Number of extensions: 2792440
Number of successful extensions: 7045
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 6962
Number of HSP's gapped (non-prelim): 93
length of query: 164
length of database: 191,569,459
effective HSP length: 108
effective length of query: 56
effective length of database: 133,290,931
effective search space: 7464292136
effective search space used: 7464292136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)