BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031166
(164 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GSJ6|LQY1_ARATH Protein disulfide-isomerase LQY1 OS=Arabidopsis thaliana GN=LQY1
PE=1 SV=1
Length = 154
Score = 189 bits (481), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 103/169 (60%), Positives = 116/169 (68%), Gaps = 27/169 (15%)
Query: 4 APSVTRLHSPFLCCPLNKLSSSATTVSLSQRNQRS-SAPYPCIRAELDQNTVVAISVGLV 62
APS RLHSPF+ CP+N T S S RN RS S YP I+AELD NTVVAISVG+
Sbjct: 5 APSPPRLHSPFIHCPIN-----FTPSSFSARNLRSPSTSYPRIKAELDPNTVVAISVGVA 59
Query: 63 SVAVGIGIPIFYETQIDNAYD-------FPIFGAGQARKYSAMLPLQWLRCSCRFCMGTG 115
SVA+GIGIP+FYETQIDNA FP G G + CR C+G+G
Sbjct: 60 SVALGIGIPVFYETQIDNAAKRENTQPCFPCNGTGAQK--------------CRLCVGSG 105
Query: 116 SVTVELGGDEREFSKCINCDGVGSLTCTTCQGTGIQPRYLDRREFKDDD 164
+VTVELGG E+E S CINCDG GSLTCTTCQG+G+QPRYLDRREFKDDD
Sbjct: 106 NVTVELGGGEKEVSNCINCDGAGSLTCTTCQGSGVQPRYLDRREFKDDD 154
>sp|P35191|MDJ1_YEAST DnaJ homolog 1, mitochondrial OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MDJ1 PE=1 SV=1
Length = 511
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 105 RCSCRFCMGTGSVTVELGGDEREFSKCINCDGVGSL-----TCTTCQGTGIQ 151
+ SC C GTG+ TV + G + S C C+G G++ CT C G G+Q
Sbjct: 244 KVSCSTCHGTGT-TVHIRGGFQMMSTCPTCNGEGTMKRPQDNCTKCHGEGVQ 294
>sp|Q5EA90|T106A_BOVIN Transmembrane protein 106A OS=Bos taurus GN=TMEM106A PE=2 SV=1
Length = 261
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 112 MGTGSVTVELGGDEREFSKCINCD---GVGSLTCTTCQGTGIQPRYLDRR 158
G+ + + G+ R F C+ C+ G G +TC TCQG+G PR L+++
Sbjct: 25 FGSKAASYSSMGNSRPFFSCVPCERAAGAGFVTCPTCQGSGEIPRELEKQ 74
>sp|Q96A25|T106A_HUMAN Transmembrane protein 106A OS=Homo sapiens GN=TMEM106A PE=2 SV=1
Length = 262
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 107 SCRFCMGTGSVTVELGGDEREFSKCINCDGVGS---LTCTTCQGTGIQPRYLDRR 158
S + +G+ +V G + F C+ C+G +TC TCQG+G P+ L+++
Sbjct: 21 SSKPAIGSKAVNYSSTGSSKSFCSCVPCEGTADASFVTCPTCQGSGKIPQELEKQ 75
>sp|Q601X8|DNAJ_MYCH2 Chaperone protein DnaJ OS=Mycoplasma hyopneumoniae (strain 232)
GN=dnaJ PE=3 SV=2
Length = 368
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Query: 87 FGAGQARKYSAMLPLQWLRCSCRFCMGTGSVTVELGGDEREFSKCINCDGVGS------L 140
FG Q +KYS L + + + E+ ++ +C NC G G+
Sbjct: 108 FGGSQEQKYSRPLKGENFQAKIYISFIESILGKEISQKLTKYDQCDNCKGSGANSSSDIT 167
Query: 141 TCTTCQGTGIQPRYLD 156
TC CQG G+Q L+
Sbjct: 168 TCYNCQGRGMQTEVLN 183
>sp|A7GT07|DNAJ_BACCN Chaperone protein DnaJ OS=Bacillus cereus subsp. cytotoxis (strain
NVH 391-98) GN=dnaJ PE=3 SV=1
Length = 366
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Query: 107 SCRFCMGTGSVTVELG---GDEREFSKCINCDGVGSL---TCTTCQGTG 149
+C++C GTG ++VE G C +C G G + CTTC GTG
Sbjct: 157 TCKYCSGTGQISVEQNTPFGRIVNRQTCRHCSGTGQMIKEKCTTCHGTG 205
>sp|P69805|PTND_ECOLI Mannose permease IID component OS=Escherichia coli (strain K12)
GN=manZ PE=1 SV=2
Length = 283
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 16/89 (17%)
Query: 13 PFLCCPLNKLSSSATTVSLSQRNQRSSAPYPCIRAELDQNTVVAISVGLVSVAVGIGIPI 72
PF+ P+ V+L+ QR++ AE+D + I VGL+ G+G PI
Sbjct: 76 PFVAAPI-------LGVTLALEEQRANG------AEIDDGAINGIKVGLMGPLAGVGDPI 122
Query: 73 FYETQIDNAYDFPIFGAGQARKYSAMLPL 101
F+ T F GAG A S + PL
Sbjct: 123 FWGTVRP---VFAALGAGIAMSGSLLGPL 148
>sp|P69806|PTND_ECOL6 Mannose permease IID component OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=manZ PE=3 SV=1
Length = 286
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 16/89 (17%)
Query: 13 PFLCCPLNKLSSSATTVSLSQRNQRSSAPYPCIRAELDQNTVVAISVGLVSVAVGIGIPI 72
PF+ P+ V+L+ QR++ AE+D + I VGL+ G+G PI
Sbjct: 79 PFVAAPI-------LGVTLALEEQRANG------AEIDDGAINGIKVGLMGPLAGVGDPI 125
Query: 73 FYETQIDNAYDFPIFGAGQARKYSAMLPL 101
F+ T F GAG A S + PL
Sbjct: 126 FWGTVRP---VFAALGAGIAMSGSLLGPL 151
>sp|P69807|PTND_ECO57 Mannose permease IID component OS=Escherichia coli O157:H7 GN=manZ
PE=3 SV=1
Length = 286
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 16/89 (17%)
Query: 13 PFLCCPLNKLSSSATTVSLSQRNQRSSAPYPCIRAELDQNTVVAISVGLVSVAVGIGIPI 72
PF+ P+ V+L+ QR++ AE+D + I VGL+ G+G PI
Sbjct: 79 PFVAAPI-------LGVTLALEEQRANG------AEIDDGAINGIKVGLMGPLAGVGDPI 125
Query: 73 FYETQIDNAYDFPIFGAGQARKYSAMLPL 101
F+ T F GAG A S + PL
Sbjct: 126 FWGTVRP---VFAALGAGIAMSGSLLGPL 151
>sp|P08043|ZFP2_MOUSE Zinc finger protein 2 OS=Mus musculus GN=Zfp2 PE=2 SV=2
Length = 459
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 8/110 (7%)
Query: 13 PFLCCPLNKLSSSATTVSLSQRNQRSSAPYPCIR--AELDQNTVVAISVGLVSVAVGIGI 70
P+ C K S ++T++L QRN PY C + Q+T + L S G+
Sbjct: 267 PYECSECGKAFSKSSTLTLHQRNHTGEKPYKCNKCGKSFSQSTYLIEHQRLHS-----GV 321
Query: 71 PIFYETQIDNAYDFPIFGAGQARKYSAMLPLQWLRCSCRFCMGTGSVTVE 120
F Q A+ R ++ P + + C F G S+TV
Sbjct: 322 KPFECNQCGKAFSKNSSLTQHRRIHTGEKPYECMICGKHF-TGRSSLTVH 370
>sp|Q6HDK8|DNAJ_BACHK Chaperone protein DnaJ OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=dnaJ PE=3 SV=1
Length = 371
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 107 SCRFCMGTGSVTVELG---GDEREFSKCINCDGVGSL---TCTTCQGTG 149
+C+ C G+G V+VE G C +C G G + CTTC G+G
Sbjct: 162 TCKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIKEKCTTCHGSG 210
>sp|Q634M8|DNAJ_BACCZ Chaperone protein DnaJ OS=Bacillus cereus (strain ZK / E33L)
GN=dnaJ PE=3 SV=1
Length = 371
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 107 SCRFCMGTGSVTVELG---GDEREFSKCINCDGVGSL---TCTTCQGTG 149
+C+ C G+G V+VE G C +C G G + CTTC G+G
Sbjct: 162 TCKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIKEKCTTCHGSG 210
>sp|C1ESK7|DNAJ_BACC3 Chaperone protein DnaJ OS=Bacillus cereus (strain 03BB102) GN=dnaJ
PE=3 SV=1
Length = 371
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 107 SCRFCMGTGSVTVELG---GDEREFSKCINCDGVGSL---TCTTCQGTG 149
+C+ C G+G V+VE G C +C G G + CTTC G+G
Sbjct: 162 TCKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIKEKCTTCHGSG 210
>sp|Q81LS3|DNAJ_BACAN Chaperone protein DnaJ OS=Bacillus anthracis GN=dnaJ PE=3 SV=1
Length = 371
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 107 SCRFCMGTGSVTVELG---GDEREFSKCINCDGVGSL---TCTTCQGTG 149
+C+ C G+G V+VE G C +C G G + CTTC G+G
Sbjct: 162 TCKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIKEKCTTCHGSG 210
>sp|C3L5R6|DNAJ_BACAC Chaperone protein DnaJ OS=Bacillus anthracis (strain CDC 684 / NRRL
3495) GN=dnaJ PE=3 SV=1
Length = 371
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 107 SCRFCMGTGSVTVELG---GDEREFSKCINCDGVGSL---TCTTCQGTG 149
+C+ C G+G V+VE G C +C G G + CTTC G+G
Sbjct: 162 TCKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIKEKCTTCHGSG 210
>sp|C3P8L9|DNAJ_BACAA Chaperone protein DnaJ OS=Bacillus anthracis (strain A0248) GN=dnaJ
PE=3 SV=1
Length = 371
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 107 SCRFCMGTGSVTVELG---GDEREFSKCINCDGVGSL---TCTTCQGTG 149
+C+ C G+G V+VE G C +C G G + CTTC G+G
Sbjct: 162 TCKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIKEKCTTCHGSG 210
>sp|B7JN38|DNAJ_BACC0 Chaperone protein DnaJ OS=Bacillus cereus (strain AH820) GN=dnaJ
PE=3 SV=1
Length = 371
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 107 SCRFCMGTGSVTVELG---GDEREFSKCINCDGVGSL---TCTTCQGTG 149
+C+ C G+G V+VE G C +C G G + CTTC G+G
Sbjct: 162 TCKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIKEKCTTCHGSG 210
>sp|Q4JCL6|RNP4_SULAC Ribonuclease P protein component 4 OS=Sulfolobus acidocaldarius
(strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 /
NCIMB 11770) GN=rnp4 PE=3 SV=1
Length = 118
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 17/111 (15%)
Query: 58 SVGLVSVAVGIGIPIFYETQIDNAYDFPIFGAGQARKYSAMLPLQWLRCSCRFCMGTGSV 117
S+ L+ +A+ + Y+ A ++ +RK+ +P+++ R CR C V
Sbjct: 13 SLELIEMAIDMTKNREYQL----AREYTKLAITYSRKFRFKIPIEYKRSICRKCY----V 64
Query: 118 TVELGGDEREFSK-------CINCDGVG--SLTCTTCQGTGIQPRYLDRRE 159
+ +G ER K C+ C V L + +G GI PR+ +R+E
Sbjct: 65 PLVIGLTERRRIKNKVVIRTCLLCGWVRRYELKRDSKEGKGIPPRHKNRQE 115
>sp|A9VHU0|DNAJ_BACWK Chaperone protein DnaJ OS=Bacillus weihenstephanensis (strain
KBAB4) GN=dnaJ PE=3 SV=1
Length = 368
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 107 SCRFCMGTGSVTVELG---GDEREFSKCINCDGVGSL---TCTTCQGTG 149
+C+ C G+G V+VE G C +C G G + CTTC G+G
Sbjct: 159 TCKHCSGSGQVSVEQNTPFGRIVNRQACGHCSGTGQMIKEKCTTCHGSG 207
>sp|Q2EG98|PK1L3_MOUSE Polycystic kidney disease protein 1-like 3 OS=Mus musculus GN=Pkd1l3
PE=2 SV=2
Length = 2201
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 80 NAYDFPIFGAGQARKYSAMLPLQWLRCSCRFCMGTGSV 117
++ FPI G+ +K + +WL+CSC +G S+
Sbjct: 1516 HSTSFPILSPGEGKKPMSFCLFRWLKCSCWLLLGVISL 1553
>sp|B9IY80|DNAJ_BACCQ Chaperone protein DnaJ OS=Bacillus cereus (strain Q1) GN=dnaJ PE=3
SV=1
Length = 371
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 107 SCRFCMGTGSVTVELG---GDEREFSKCINCDGVGSL---TCTTCQGTG 149
+C+ C G+G V+VE G C +C G G + CTTC G+G
Sbjct: 162 TCKHCSGSGQVSVEQNTPFGRIVNRQACGHCSGTGQIIKEKCTTCHGSG 210
>sp|B7HPL2|DNAJ_BACC7 Chaperone protein DnaJ OS=Bacillus cereus (strain AH187) GN=dnaJ
PE=3 SV=1
Length = 371
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 107 SCRFCMGTGSVTVELG---GDEREFSKCINCDGVGSL---TCTTCQGTG 149
+C+ C G+G V+VE G C +C G G + CTTC G+G
Sbjct: 162 TCKHCSGSGQVSVEQNTPFGRIVNRQACGHCSGTGQIIKEKCTTCHGSG 210
>sp|Q730M2|DNAJ_BACC1 Chaperone protein DnaJ OS=Bacillus cereus (strain ATCC 10987)
GN=dnaJ PE=3 SV=1
Length = 371
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 107 SCRFCMGTGSVTVELG---GDEREFSKCINCDGVGSL---TCTTCQGTG 149
+C+ C G+G V+VE G C +C G G + CTTC G+G
Sbjct: 162 TCKHCSGSGQVSVEQNTPFGRIVNRQACGHCSGTGQIIKEKCTTCHGSG 210
>sp|B7HCT9|DNAJ_BACC4 Chaperone protein DnaJ OS=Bacillus cereus (strain B4264) GN=dnaJ
PE=3 SV=1
Length = 371
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 107 SCRFCMGTGSVTVELG---GDEREFSKCINCDGVGSL---TCTTCQGTG 149
+C+ C G+G V+VE G C +C G G + CTTC G+G
Sbjct: 162 TCKHCSGSGQVSVEQNTPFGRIVNRQACGHCSGTGQIIKEKCTTCHGSG 210
>sp|B7IYG6|DNAJ_BACC2 Chaperone protein DnaJ OS=Bacillus cereus (strain G9842) GN=dnaJ
PE=3 SV=1
Length = 371
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 107 SCRFCMGTGSVTVELG---GDEREFSKCINCDGVGSL---TCTTCQGTG 149
+C+ C G+G V+VE G C +C G G + CTTC G+G
Sbjct: 162 TCKHCSGSGQVSVEQNTPFGRIVNRQACGHCSGTGQIIKEKCTTCHGSG 210
>sp|Q6ZN57|ZFP2_HUMAN Zinc finger protein 2 homolog OS=Homo sapiens GN=ZFP2 PE=2 SV=1
Length = 461
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 8/110 (7%)
Query: 13 PFLCCPLNKLSSSATTVSLSQRNQRSSAPYPCIR--AELDQNTVVAISVGLVSVAVGIGI 70
P+ C K S ++T++L QRN PY C + Q+T + L S G+
Sbjct: 269 PYECSQCGKAFSKSSTLTLHQRNHTGEKPYKCNKCGKSFSQSTYLIEHQRLHS-----GV 323
Query: 71 PIFYETQIDNAYDFPIFGAGQARKYSAMLPLQWLRCSCRFCMGTGSVTVE 120
F + A+ R ++ P + + C F G S+TV
Sbjct: 324 KPFECNECGKAFSKNSSLTQHRRIHTGEKPYECMVCGKHF-TGRSSLTVH 372
>sp|Q9NYW8|RBAK_HUMAN RB-associated KRAB zinc finger protein OS=Homo sapiens GN=RBAK PE=1
SV=1
Length = 714
Score = 31.6 bits (70), Expect = 2.6, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Query: 9 RLHS---PFLCCPLNKLSSSATTVSLSQRNQRSSAPYPC 44
R HS P+ C K T ++L QRN PYPC
Sbjct: 337 RTHSGEKPYECSECGKTFCQKTHLTLHQRNHSGERPYPC 375
>sp|Q8TA83|DNJ10_CAEEL DnaJ homolog dnj-10 OS=Caenorhabditis elegans GN=dnj-10 PE=4 SV=1
Length = 456
Score = 30.8 bits (68), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 105 RCSCRFCMGTGSVTVELGGDEREFSKCINCDGVGSLT---CTTCQGTG 149
+ SC +C GTG+V+ L G + C C G G C C+G G
Sbjct: 205 KTSCPYCNGTGAVSQRLQGGFFYQTTCNRCRGSGHYNKNPCQECEGEG 252
>sp|P53940|APJ1_YEAST J domain-containing protein APJ1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=APJ1 PE=1 SV=1
Length = 528
Score = 30.8 bits (68), Expect = 4.5, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 105 RCSCRFCMGTG--SVTVELGGDEREFSK-CINCDGVGSLT-----CTTCQGTG 149
+C+C+ C G G + T +G + +S+ C +C G G C CQG G
Sbjct: 217 KCTCKTCKGQGIQTQTRRMGPLVQSWSQTCADCGGAGVFVKNKDICQQCQGLG 269
Score = 30.4 bits (67), Expect = 5.9, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 3/24 (12%)
Query: 131 CINCDGVGSL---TCTTCQGTGIQ 151
C CDG G L TC TC+G GIQ
Sbjct: 206 CSVCDGHGGLKKCTCKTCKGQGIQ 229
>sp|B9DNJ9|DNAJ_STACT Chaperone protein DnaJ OS=Staphylococcus carnosus (strain TM300)
GN=dnaJ PE=3 SV=1
Length = 377
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 105 RCSCRFCMGTGSVTVELG---GDEREFSKCINCDGVGSLT---CTTCQGTGIQPR 153
+ +C +C G+G V+VE G R C C+G G C TC G G + +
Sbjct: 161 KKTCHYCNGSGHVSVEQNTILGRVRTEKVCPVCNGTGEEIEEPCPTCHGKGTETK 215
>sp|Q5BK83|T106A_RAT Transmembrane protein 106A OS=Rattus norvegicus GN=Tmem106a PE=2
SV=1
Length = 261
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 123 GDEREFSKCINCDGVGS---LTCTTCQGTGIQPRYLDRR 158
G+ + C+ C+ S +TC TCQG G P+ L+++
Sbjct: 36 GNRKPSHSCVPCEKAASTSFVTCPTCQGNGEIPQELEKQ 74
>sp|Q8BQC8|RBAK_MOUSE RB-associated KRAB zinc finger protein OS=Mus musculus GN=Rbak PE=1
SV=1
Length = 711
Score = 30.4 bits (67), Expect = 5.3, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Query: 9 RLHS---PFLCCPLNKLSSSATTVSLSQRNQRSSAPYPC 44
R HS P+ C K T ++L QRN PYPC
Sbjct: 334 RTHSGEKPYECSECGKSFCQKTHLTLHQRNHSGERPYPC 372
>sp|Q1LWC2|T106B_DANRE Transmembrane protein 106B OS=Danio rerio GN=tmem106b PE=3 SV=1
Length = 267
Score = 30.4 bits (67), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 122 GGDEREFSKCINCDGVGSLTCTTCQGTGIQPR 153
GGD +F + G S+TC TCQGTG PR
Sbjct: 38 GGDVSQFPY-VEFTGRDSVTCPTCQGTGRIPR 68
>sp|B7IFE0|DNAJ_THEAB Chaperone protein DnaJ OS=Thermosipho africanus (strain TCF52B)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 20/128 (15%)
Query: 35 NQRSSAPYPCIRAELDQNTVVAISVGLVSVAVGIGIPIFYETQIDNAYDFPIFGAGQARK 94
+QR+S+ RA+ ++ + + V V G IPI Y + Y+ G+ +
Sbjct: 117 DQRTSSRQKQRRAKRGEDINITVDVPFEQVFTGTTIPIEY-----DRYEVCSHCNGEGVE 171
Query: 95 YSAMLPLQWLRCSCRFCMGTGSVTVE----LGGDEREFSKCINCDGVGSL---TCTTCQG 147
+ W+ SC C GTG V E LG +++ C C G G + TC C G
Sbjct: 172 PGSG----WV--SCPKCHGTGVVREERRTFLGVIVNQYT-CNQCGGTGKIPGETCHVCGG 224
Query: 148 TG-IQPRY 154
+G I+ R+
Sbjct: 225 SGRIRKRH 232
>sp|C5D4U0|DNAJ_GEOSW Chaperone protein DnaJ OS=Geobacillus sp. (strain WCH70) GN=dnaJ
PE=3 SV=1
Length = 380
Score = 30.0 bits (66), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 12/52 (23%)
Query: 107 SCRFCMGTGSVTVELGGDEREFSKCIN------CDGVGSL---TCTTCQGTG 149
+C +C GTG ++ E F + +N C G G CTTC GTG
Sbjct: 164 TCSYCHGTGQISTE---QSTPFGRIVNRRTCPYCGGTGQYIKEKCTTCGGTG 212
>sp|Q818F0|DNAJ_BACCR Chaperone protein DnaJ OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=dnaJ PE=3 SV=1
Length = 371
Score = 29.6 bits (65), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Query: 107 SCRFCMGTGSVTVELG---GDEREFSKCINCDGVGSL---TCTTCQGT 148
+C+ C G+G V+VE G C +C G G + CTTC G+
Sbjct: 162 TCKHCSGSGQVSVEQNTPFGRIVNRQACGHCSGTGQIIKEKCTTCHGS 209
>sp|P63972|DNAJ_STAAW Chaperone protein DnaJ OS=Staphylococcus aureus (strain MW2)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 105 RCSCRFCMGTGSVTVELG---GDEREFSKCINCDGVG---SLTCTTCQGTGIQPR 153
+ +C +C G G V VE G R C C+G G C TC G G + +
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENK 217
>sp|A8Z4B8|DNAJ_STAAT Chaperone protein DnaJ OS=Staphylococcus aureus (strain USA300 /
TCH1516) GN=dnaJ PE=3 SV=1
Length = 379
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 105 RCSCRFCMGTGSVTVELG---GDEREFSKCINCDGVG---SLTCTTCQGTGIQPR 153
+ +C +C G G V VE G R C C+G G C TC G G + +
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENK 217
>sp|Q6G8Y8|DNAJ_STAAS Chaperone protein DnaJ OS=Staphylococcus aureus (strain MSSA476)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 105 RCSCRFCMGTGSVTVELG---GDEREFSKCINCDGVG---SLTCTTCQGTGIQPR 153
+ +C +C G G V VE G R C C+G G C TC G G + +
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENK 217
>sp|P63971|DNAJ_STAAN Chaperone protein DnaJ OS=Staphylococcus aureus (strain N315)
GN=dnaJ PE=1 SV=1
Length = 379
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 105 RCSCRFCMGTGSVTVELG---GDEREFSKCINCDGVG---SLTCTTCQGTGIQPR 153
+ +C +C G G V VE G R C C+G G C TC G G + +
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENK 217
>sp|P63970|DNAJ_STAAM Chaperone protein DnaJ OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=dnaJ PE=1 SV=1
Length = 379
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 105 RCSCRFCMGTGSVTVELG---GDEREFSKCINCDGVG---SLTCTTCQGTGIQPR 153
+ +C +C G G V VE G R C C+G G C TC G G + +
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENK 217
>sp|A6QHC2|DNAJ_STAAE Chaperone protein DnaJ OS=Staphylococcus aureus (strain Newman)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 105 RCSCRFCMGTGSVTVELG---GDEREFSKCINCDGVG---SLTCTTCQGTGIQPR 153
+ +C +C G G V VE G R C C+G G C TC G G + +
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENK 217
>sp|Q5HFI1|DNAJ_STAAC Chaperone protein DnaJ OS=Staphylococcus aureus (strain COL)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 105 RCSCRFCMGTGSVTVELG---GDEREFSKCINCDGVG---SLTCTTCQGTGIQPR 153
+ +C +C G G V VE G R C C+G G C TC G G + +
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENK 217
>sp|A5ITA7|DNAJ_STAA9 Chaperone protein DnaJ OS=Staphylococcus aureus (strain JH9)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 105 RCSCRFCMGTGSVTVELG---GDEREFSKCINCDGVG---SLTCTTCQGTGIQPR 153
+ +C +C G G V VE G R C C+G G C TC G G + +
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENK 217
>sp|Q2FXZ3|DNAJ_STAA8 Chaperone protein DnaJ OS=Staphylococcus aureus (strain NCTC 8325)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 105 RCSCRFCMGTGSVTVELG---GDEREFSKCINCDGVG---SLTCTTCQGTGIQPR 153
+ +C +C G G V VE G R C C+G G C TC G G + +
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENK 217
>sp|Q2FGE4|DNAJ_STAA3 Chaperone protein DnaJ OS=Staphylococcus aureus (strain USA300)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 105 RCSCRFCMGTGSVTVELG---GDEREFSKCINCDGVG---SLTCTTCQGTGIQPR 153
+ +C +C G G V VE G R C C+G G C TC G G + +
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENK 217
>sp|A6U251|DNAJ_STAA2 Chaperone protein DnaJ OS=Staphylococcus aureus (strain JH1)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 105 RCSCRFCMGTGSVTVELG---GDEREFSKCINCDGVG---SLTCTTCQGTGIQPR 153
+ +C +C G G V VE G R C C+G G C TC G G + +
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENK 217
>sp|A7X2Y0|DNAJ_STAA1 Chaperone protein DnaJ OS=Staphylococcus aureus (strain Mu3 / ATCC
700698) GN=dnaJ PE=3 SV=1
Length = 379
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 105 RCSCRFCMGTGSVTVELG---GDEREFSKCINCDGVG---SLTCTTCQGTGIQPR 153
+ +C +C G G V VE G R C C+G G C TC G G + +
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENK 217
>sp|Q6GGC1|DNAJ_STAAR Chaperone protein DnaJ OS=Staphylococcus aureus (strain MRSA252)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 105 RCSCRFCMGTGSVTVELG---GDEREFSKCINCDGVG---SLTCTTCQGTGIQPR 153
+ +C +C G G V VE G R C C+G G C TC G G + +
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENK 217
>sp|P45555|DNAJ_STAAU Chaperone protein DnaJ OS=Staphylococcus aureus GN=dnaJ PE=3 SV=1
Length = 379
Score = 29.6 bits (65), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 105 RCSCRFCMGTGSVTVELG---GDEREFSKCINCDGVG---SLTCTTCQGTGIQPR 153
+ +C +C G G V VE G R C C+G G C TC G G + +
Sbjct: 163 KKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENK 217
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,291,229
Number of Sequences: 539616
Number of extensions: 2340128
Number of successful extensions: 6322
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 6232
Number of HSP's gapped (non-prelim): 223
length of query: 164
length of database: 191,569,459
effective HSP length: 108
effective length of query: 56
effective length of database: 133,290,931
effective search space: 7464292136
effective search space used: 7464292136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)