BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031168
(164 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein OS=Arabidopsis thaliana
GN=At3g01520 PE=1 SV=2
Length = 175
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 16/156 (10%)
Query: 14 SACSKKALQWAADNVVRNGDH-----LILVTVVPEGGLEKGEQQLWEDSGSPLIPLAEFS 68
S K+A +W + +VR+ L+ V VV E G ++D S +F
Sbjct: 24 SISCKRAFEWTLEKIVRSNTSDFKILLLHVQVVDEDG--------FDDVDSIYASPEDFR 75
Query: 69 EPTIMKKYGAKPDPETLDIVNTVARQKQIVVVMKIFWGDPREKICEAIDKIPLSCLVIGN 128
+ M++ L+ + + I GDP++ IC+ + ++ LV+G+
Sbjct: 76 D---MRQSNKAKGLHLLEFFVNKCHEIGVGCEAWIKTGDPKDVICQEVKRVRPDFLVVGS 132
Query: 129 RGLGKLKRAIMGSVSNYVVNNGSCPVTVVKQGIHET 164
RGLG+ ++ +G+VS + V + CPV +K+ ET
Sbjct: 133 RGLGRFQKVFVGTVSAFCVKHAECPVMTIKRNADET 168
>sp|P87132|YFK5_SCHPO Uncharacterized protein C167.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC167.05 PE=1 SV=2
Length = 601
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 15/155 (9%)
Query: 9 VAVDFSACSKKALQWAADNVVRNGDHLILVTVVPEGGLEKGEQQLWEDSGSPLIPLAEFS 68
+ +D S+ S A +WA ++RNGD LI+V V+ + + S + E
Sbjct: 435 LTLDLSSESLHAAEWAVGILLRNGDTLIIVDVI----------ECDDPSARAVKDRMESE 484
Query: 69 EPTIMKKYGAKPDPETLDIVNTVARQKQIVVVMKIFWGDPREKICEAIDKIPLSCLVIGN 128
+ ++K L +++ + ++ + + I + I E ID I S +V+G+
Sbjct: 485 QLETLEKI----TKYILKLLSKTVLEVEVNIEV-IHHEKAKHLIIEMIDYIEPSLVVMGS 539
Query: 129 RGLGKLKRAIMGSVSNYVVNNGSCPVTVVKQGIHE 163
RG LK ++GS SNY+VN S PV V ++ + +
Sbjct: 540 RGRSHLKGVLLGSFSNYLVNKSSVPVMVARKKLKK 574
>sp|Q57951|Y531_METJA Universal stress protein MJ0531 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0531 PE=3 SV=1
Length = 170
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 17/154 (11%)
Query: 23 WAADNVVRNGDHLILVTVVPEGG----LEKGEQQL-------------WEDSGSPLIPLA 65
+ ++++RNG++L V+P G LE + + + SP + L
Sbjct: 13 YILNSIIRNGENLYKKIVIPTDGSDVSLEAAKHAINIAKEFDAEVYAIYVVDVSPFVGLP 72
Query: 66 EFSEPTIMKKYGAKPDPETLDIVNTVARQKQIVVVMKIFWGDPREKICEAIDKIPLSCLV 125
++ + + E L V +A + + + ++ G P +I E +K +V
Sbjct: 73 AEGSWELISELLKEEGQEALKKVKKMAEEWGVKIHTEMLEGVPANEIVEFAEKKKADLIV 132
Query: 126 IGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVKQ 159
+G G L+R ++GSV+ V+ N CPV VVK+
Sbjct: 133 MGTTGKTGLERILLGSVAERVIKNAHCPVLVVKK 166
>sp|O07552|NHAX_BACSU Stress response protein NhaX OS=Bacillus subtilis (strain 168)
GN=nhaX PE=2 SV=2
Length = 166
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 69/173 (39%), Gaps = 32/173 (18%)
Query: 6 RVGVAVDFSACSKKALQWAAD---------NVVRNGDHLILVTVVP-----------EGG 45
R+ VA D S SKKAL A D V + D TV+ GG
Sbjct: 6 RIIVAFDGSENSKKALLTAIDLAKTVNAAITVAHSHDMKDNQTVIDPPRPAAEASYISGG 65
Query: 46 LEKGEQQLWEDSGSPLIPLAEFSEPTIMKKYGAKPDPETLDIVNTVARQKQIVVVMKIFW 105
+ L D SP EP I + + E ++N ++Q + I
Sbjct: 66 MTSVPDPLISDVTSP--------EPMIYEDRTEEVIAEARMMLN----EQQADGDIDILE 113
Query: 106 GDPREKICEAIDKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVK 158
GDP E I E ++I +V G+R +LK+ I GSVS + PV +VK
Sbjct: 114 GDPAESIIEHANRISADMIVTGSRDQNRLKKLIFGSVSEKLSAKSDIPVLIVK 166
>sp|P42297|YXIE_BACSU Universal stress protein YxiE OS=Bacillus subtilis (strain 168)
GN=yxiE PE=3 SV=1
Length = 148
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 106 GDPREKICEAIDKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVK 158
G+P +I + +S +V+G+RG+ LK ++GSVS+ V +CPV +V+
Sbjct: 96 GEPAHEILNHAKEKGVSLIVVGSRGISGLKEMMLGSVSHKVSQLSTCPVLIVR 148
>sp|P74148|Y1388_SYNY3 Universal stress protein Sll1388 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1388 PE=3 SV=1
Length = 154
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 20/165 (12%)
Query: 3 GTRRVGVAVDFSACSKKALQWAADNVVRNGDHLILVTVVPEGGLEKGEQQLWEDSGSPLI 62
G ++ VA+D S +K+ LQ A + L++ +P DS I
Sbjct: 2 GYGKILVALDRSELAKEVLQQAIALGQKESSQLMVFYCIPV------------DSQDLSI 49
Query: 63 PLAEFSEPTI-----MKKYGAKPDPETLDIVNTVARQKQ---IVVVMKIFWGDPREKICE 114
+ + E I +K++ + E + + ++ +Q Q + + G+P I +
Sbjct: 50 YPSFYGEAAIGFSQIIKEHLEEQQTEAREWLQSIVQQVQEDGVACEWDVKVGEPGRWIRD 109
Query: 115 AIDKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVKQ 159
+V+G RGL L +GSVS+YV+++ C V +V+
Sbjct: 110 MAKNWDADLVVLGRRGLKGLAEVFLGSVSSYVIHHVQCSVLIVQH 154
>sp|P72745|Y1101_SYNY3 Universal stress protein Slr1101 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr1101 PE=3 SV=1
Length = 108
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 88 VNTVARQKQIVVVMKI------FWGDPREKICEAIDKIPLSCLVIGNRGLGKLKRAIMGS 141
++T+ +++Q + + I G P + IC+ + +V+G+RG L ++GS
Sbjct: 29 LDTLEKRRQQALALDIECQAEQILGSPGKIICQRAKQDNSDIIVVGHRGRWGLSEILLGS 88
Query: 142 VSNYVVNNGSCPVTVV 157
V NYV ++ C V VV
Sbjct: 89 VGNYVFHHAHCCVFVV 104
>sp|O53472|Y2026_MYCTU Universal stress protein Rv2026c/MT2085 OS=Mycobacterium
tuberculosis GN=Rv2026c PE=2 SV=1
Length = 294
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 27/37 (72%)
Query: 124 LVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVKQG 160
+V+G++G+G L R ++GS+S ++++ CPV ++ G
Sbjct: 114 MVVGSQGMGALGRLLLGSISTALLHHARCPVAIIHSG 150
>sp|P72817|Y1654_SYNY3 Universal stress protein Sll1654 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1654 PE=3 SV=1
Length = 157
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 20/147 (13%)
Query: 11 VDFSACSKKALQWAADNVVRNGDHLILVTVVPEGGLEKGEQQLWEDSGSPLIPLAEFSEP 70
+D S ++ A Q AD V + LIL++VV + + + DS + L E ++
Sbjct: 30 LDRSREARDAAQMVADLVKIHQSQLILLSVVEKNPPGQDHEAHGMDSPEAVAKLLEAAQA 89
Query: 71 TIMKKYGAKPDPETLDIVNTVARQKQIVVVMKIFWGDPREKICEAIDKIPLSCLVIGNRG 130
++ A T+ R+ G IC+ D++ +V+G RG
Sbjct: 90 VFSQQGIA---------TKTIERE-----------GMASFTICDVADEVNADLIVMGCRG 129
Query: 131 LGKLKRAIMGSVSNYVVNNGSCPVTVV 157
LG + SV+ V+N CPV VV
Sbjct: 130 LGLTTEGVAESVTARVINLSPCPVLVV 156
>sp|P74897|YQA3_THEAQ Universal stress protein in QAH/OAS sulfhydrylase 3'region
OS=Thermus aquaticus PE=3 SV=1
Length = 137
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 103 IFWGDPREKICEAIDKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVK 158
+ G P E I +A +V+G RGLG + +GS S VV CPV +V+
Sbjct: 82 LLQGRPAEAILQAAIGEKADLIVMGTRGLGAVGSLFLGSQSQKVVAEAPCPVLLVR 137
>sp|A0QZA1|Y3950_MYCS2 Universal stress protein MSMEG_3950/MSMEI_3859 OS=Mycobacterium
smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_3950
PE=1 SV=1
Length = 294
Score = 38.9 bits (89), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 LVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVK---QGIHET 164
+V+GNRG+G L R ++GS S +++ S PV VV Q H++
Sbjct: 114 VVVGNRGMGALGRVLLGSTSTSLLHYASGPVVVVHGDDQAAHDS 157
Score = 30.8 bits (68), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 124 LVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVK 158
+V+G+ G G ++GSVS+ V + + PV VV+
Sbjct: 258 VVVGSHGRGGFTGMLLGSVSSRVAQSATTPVMVVR 292
>sp|P50089|YG51_YEAST Uncharacterized protein YGR237C OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YGR237C PE=1 SV=1
Length = 785
Score = 37.4 bits (85), Expect = 0.046, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 19/24 (79%)
Query: 20 ALQWAADNVVRNGDHLILVTVVPE 43
++ W +N+ RNGDHL+++T +PE
Sbjct: 352 SVDWYVENLTRNGDHLVIITTIPE 375
>sp|Q4L751|Y1215_STAHJ Putative universal stress protein SH1215 OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=SH1215 PE=3 SV=1
Length = 165
Score = 37.0 bits (84), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 23/162 (14%)
Query: 1 MDGTRRVGVAVDFSACSKKALQWAADNVVRNGDHLILVTVVPE---GGLEKGEQQLWEDS 57
M + + +AVD S ++ A A D RN L +V ++ E + Q E S
Sbjct: 1 MLTYKNILIAVDGSHEAEWAFNKAVDVAKRNDAKLTIVNIIDSRTYSSYEVYDAQFTEKS 60
Query: 58 GSPLIPLAEFSEPTIMKKYGAKPDPETLDIVNTVARQKQIVVVMKIFWGDPREKICEAI- 116
S FSE ++K Y R V ++ +G P+ I + +
Sbjct: 61 RS-------FSEE-LLKGYQ-----------EVATRAGVTNVETRLEFGSPKAIIPKKLA 101
Query: 117 DKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVK 158
++ + ++ G GL ++R I+GSVS +V + C V VV+
Sbjct: 102 SELGVDLIMCGTSGLNAVERFIVGSVSEAIVRHAPCDVLVVR 143
>sp|P64922|Y2028_MYCBO Universal stress protein Mb2028c OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=Mb2028c PE=3 SV=1
Length = 295
Score = 36.6 bits (83), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 89 NTVARQKQIVVVMKIFWGDPREKICEAIDKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVN 148
V +++ V ++ + P + E ++ + +V+G+ G G L R ++GSVS+ +V
Sbjct: 81 EAVGADRKLSVKSELVFSTPVPTMVEISNEAEM--VVLGSSGRGALARGLLGSVSSSLVR 138
Query: 149 NGSCPVTVVKQ 159
CPV V+
Sbjct: 139 RAGCPVAVIHS 149
Score = 33.1 bits (74), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 124 LVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVKQ 159
+V+G+ G G L ++GSVSN V++ PV V +Q
Sbjct: 259 VVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQ 294
>sp|P64921|Y2005_MYCTU Universal stress protein Rv2005c/MT2061 OS=Mycobacterium
tuberculosis GN=Rv2005c PE=1 SV=1
Length = 295
Score = 36.6 bits (83), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 89 NTVARQKQIVVVMKIFWGDPREKICEAIDKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVN 148
V +++ V ++ + P + E ++ + +V+G+ G G L R ++GSVS+ +V
Sbjct: 81 EAVGADRKLSVKSELVFSTPVPTMVEISNEAEM--VVLGSSGRGALARGLLGSVSSSLVR 138
Query: 149 NGSCPVTVVKQ 159
CPV V+
Sbjct: 139 RAGCPVAVIHS 149
Score = 33.1 bits (74), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 124 LVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVKQ 159
+V+G+ G G L ++GSVSN V++ PV V +Q
Sbjct: 259 VVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQ 294
>sp|Q57997|Y577_METJA Universal stress protein MJ0577 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0577 PE=1 SV=1
Length = 162
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 71/170 (41%), Gaps = 31/170 (18%)
Query: 5 RRVGVAVDFSACSKKALQWAADNVVRNGDHLILVTVVPE---------------GGLEKG 49
+++ DFS ++ AL+ + +IL+ V+ E GL K
Sbjct: 6 KKILYPTDFSETAEIALKHVKAFKTLKAEEVILLHVIDEREIKKRDIFSLLLGVAGLNKS 65
Query: 50 EQQLWEDSGSPLIPLAEFSEPTIMKKYGAKPDPETLDIVNTVARQKQIVVVMKIFWGDPR 109
++ + + L A+ I K ++ + + K I+VV G P
Sbjct: 66 VEEFENELKNKLTEEAKNKMENIKK-----------ELEDVGFKVKDIIVV-----GIPH 109
Query: 110 EKICEAIDKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVKQ 159
E+I + + + +++G+ G LK ++GSV+ V+ + PV VVK+
Sbjct: 110 EEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKSNKPVLVVKR 159
>sp|Q49YE0|Y1056_STAS1 Putative universal stress protein SSP1056 OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=SSP1056 PE=3 SV=1
Length = 167
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 29/161 (18%)
Query: 5 RRVGVAVDFSACSKKALQWAADNVVRNGDHLILVTVVPE---GGLEKGEQQLWEDSGSPL 61
+ + +AVD S ++ A A D RN L +V V+ E + Q E S +
Sbjct: 5 KSILIAVDGSHEAEWAFNKAVDVAKRNDAKLTVVNVIDSRTYSSYEVYDAQFTEKSKN-- 62
Query: 62 IPLAEFSEPTIMKKYGAKPDPETLDIVNTVARQKQIVVVMKIFWGDPR----EKICEAID 117
FS+ ++K Y V T A K V ++ +G P+ +K+ +D
Sbjct: 63 -----FSDD-LLKGYKE---------VATNAGVKN--VETRLEFGSPKAIIPKKLATDVD 105
Query: 118 KIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVK 158
+ C G GL ++R I+GSVS +V + C V VV+
Sbjct: 106 ADLIMC---GTSGLNAVERFIVGSVSEAIVRHSPCDVLVVR 143
>sp|P0A5F8|Y2019_MYCBO Universal stress protein Mb2019 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=Mb2019 PE=3 SV=1
Length = 317
Score = 33.1 bits (74), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 9 VAVDFSACSKKALQWAADNVVRNGDHLILVTVVPEGGLEKGEQQLWEDSGSPLIPLAEFS 68
V VD S CS A++WAA + L +V VVP + E +E S E
Sbjct: 12 VGVDGSPCSHTAVEWAARDAQMRNVALRVVQVVPPV-ITAPEGWAFEYSRFQEAQKREIV 70
Query: 69 EPTIMKKYGAKPDPETLDIV---NTVARQKQIVVVMKIFWGDPREKICEAIDKIP--LSC 123
E + + + + + ++ R QI ++ G +I + I ++
Sbjct: 71 EHSYLVAQAHQIVEQAHKVALEASSSGRAAQIT--GEVLHG----QIVPTLANISRQVAM 124
Query: 124 LVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVV 157
+V+G RG G + A++GSVS+ +V + PV V+
Sbjct: 125 VVLGYRGQGAVAGALLGSVSSSLVRHAHGPVAVI 158
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 124 LVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVK 158
+V+G+ G G +GSVS VVN+G PV V +
Sbjct: 274 VVVGSHGRGGFPGMHLGSVSRAVVNSGQAPVIVAR 308
>sp|P0A5F7|Y1996_MYCTU Universal stress protein Rv1996/MT2052 OS=Mycobacterium
tuberculosis GN=Rv1996 PE=1 SV=1
Length = 317
Score = 33.1 bits (74), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 9 VAVDFSACSKKALQWAADNVVRNGDHLILVTVVPEGGLEKGEQQLWEDSGSPLIPLAEFS 68
V VD S CS A++WAA + L +V VVP + E +E S E
Sbjct: 12 VGVDGSPCSHTAVEWAARDAQMRNVALRVVQVVPPV-ITAPEGWAFEYSRFQEAQKREIV 70
Query: 69 EPTIMKKYGAKPDPETLDIV---NTVARQKQIVVVMKIFWGDPREKICEAIDKIP--LSC 123
E + + + + + ++ R QI ++ G +I + I ++
Sbjct: 71 EHSYLVAQAHQIVEQAHKVALEASSSGRAAQIT--GEVLHG----QIVPTLANISRQVAM 124
Query: 124 LVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVV 157
+V+G RG G + A++GSVS+ +V + PV V+
Sbjct: 125 VVLGYRGQGAVAGALLGSVSSSLVRHAHGPVAVI 158
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 124 LVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVK 158
+V+G+ G G +GSVS VVN+G PV V +
Sbjct: 274 VVVGSHGRGGFPGMHLGSVSRAVVNSGQAPVIVAR 308
>sp|Q2FXL6|Y1819_STAA8 Putative universal stress protein SAOUHSC_01819 OS=Staphylococcus
aureus (strain NCTC 8325) GN=SAOUHSC_01819 PE=3 SV=1
Length = 166
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 99 VVMKIFWGDPREKICEAI-DKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVV 157
V ++ +G P+ I + + +I ++ G GL ++R I+GSVS +V + C V VV
Sbjct: 83 VETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVV 142
Query: 158 K 158
+
Sbjct: 143 R 143
>sp|Q6GFZ7|Y1788_STAAR Putative universal stress protein SAR1788 OS=Staphylococcus aureus
(strain MRSA252) GN=SAR1788 PE=3 SV=1
Length = 166
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 99 VVMKIFWGDPREKICEAI-DKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVV 157
V ++ +G P+ I + + +I ++ G GL ++R I+GSVS +V + C V VV
Sbjct: 83 VETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVV 142
Query: 158 K 158
+
Sbjct: 143 R 143
>sp|Q5HF64|Y1759_STAAC Putative universal stress protein SACOL1759 OS=Staphylococcus
aureus (strain COL) GN=SACOL1759 PE=3 SV=1
Length = 166
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 99 VVMKIFWGDPREKICEAI-DKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVV 157
V ++ +G P+ I + + +I ++ G GL ++R I+GSVS +V + C V VV
Sbjct: 83 VETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVV 142
Query: 158 K 158
+
Sbjct: 143 R 143
>sp|Q99TF3|Y1710_STAAM Putative universal stress protein SAV1710 OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=SAV1710 PE=1 SV=1
Length = 166
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 99 VVMKIFWGDPREKICEAI-DKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVV 157
V ++ +G P+ I + + +I ++ G GL ++R I+GSVS +V + C V VV
Sbjct: 83 VETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVV 142
Query: 158 K 158
+
Sbjct: 143 R 143
>sp|Q2FG28|Y1656_STAA3 Putative universal stress protein SAUSA300_1656 OS=Staphylococcus
aureus (strain USA300) GN=SAUSA300_1656 PE=3 SV=1
Length = 166
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 99 VVMKIFWGDPREKICEAI-DKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVV 157
V ++ +G P+ I + + +I ++ G GL ++R I+GSVS +V + C V VV
Sbjct: 83 VETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVV 142
Query: 158 K 158
+
Sbjct: 143 R 143
>sp|Q7A0N0|Y1653_STAAW Putative universal stress protein MW1653 OS=Staphylococcus aureus
(strain MW2) GN=MW1653 PE=3 SV=1
Length = 166
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 99 VVMKIFWGDPREKICEAI-DKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVV 157
V ++ +G P+ I + + +I ++ G GL ++R I+GSVS +V + C V VV
Sbjct: 83 VETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVV 142
Query: 158 K 158
+
Sbjct: 143 R 143
>sp|Q6G8L7|Y1637_STAAS Putative universal stress protein SAS1637 OS=Staphylococcus aureus
(strain MSSA476) GN=SAS1637 PE=3 SV=1
Length = 166
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 99 VVMKIFWGDPREKICEAI-DKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVV 157
V ++ +G P+ I + + +I ++ G GL ++R I+GSVS +V + C V VV
Sbjct: 83 VETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVV 142
Query: 158 K 158
+
Sbjct: 143 R 143
>sp|Q2YTD0|Y1569_STAAB Putative universal stress protein SAB1569 OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=SAB1569 PE=3 SV=1
Length = 166
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 99 VVMKIFWGDPREKICEAI-DKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVV 157
V ++ +G P+ I + + +I ++ G GL ++R I+GSVS +V + C V VV
Sbjct: 83 VETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVV 142
Query: 158 K 158
+
Sbjct: 143 R 143
>sp|Q7A551|Y1532_STAAN Putative universal stress protein SA1532 OS=Staphylococcus aureus
(strain N315) GN=SA1532 PE=1 SV=1
Length = 166
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 99 VVMKIFWGDPREKICEAI-DKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVV 157
V ++ +G P+ I + + +I ++ G GL ++R I+GSVS +V + C V VV
Sbjct: 83 VETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVV 142
Query: 158 K 158
+
Sbjct: 143 R 143
>sp|Q8CS61|Y1385_STAES Putative universal stress protein SE_1385 OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=SE_1385 PE=3 SV=1
Length = 166
Score = 32.7 bits (73), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 23/162 (14%)
Query: 1 MDGTRRVGVAVDFSACSKKALQWAADNVVRNGDHLILVTVVPE---GGLEKGEQQLWEDS 57
M + + +AVD S ++ A A RN L +V V+ E + Q E S
Sbjct: 1 MISYKNILIAVDGSHEAEWAFNKAVGVAKRNDAQLTIVNVIDSRTYSSYEVYDAQFTEKS 60
Query: 58 GSPLIPLAEFSEPTIMKKYGAKPDPETLDIVNTVARQKQIVVVMKIFWGDPREKICEAID 117
FSE ++K Y + V+T ++ +G P+ I + +
Sbjct: 61 -------KHFSEE-LLKGYKEVATNAGVKNVDT-----------RLEFGSPKAIIPKKLA 101
Query: 118 K-IPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVK 158
+ + ++ G GL ++R I+GSVS +V + C V VV+
Sbjct: 102 RDVGADLIMSGTSGLNAVERFIVGSVSEAIVRHAPCDVLVVR 143
>sp|Q5HNJ5|Y1273_STAEQ Putative universal stress protein SERP1273 OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=SERP1273 PE=3
SV=1
Length = 166
Score = 32.7 bits (73), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 23/162 (14%)
Query: 1 MDGTRRVGVAVDFSACSKKALQWAADNVVRNGDHLILVTVVPE---GGLEKGEQQLWEDS 57
M + + +AVD S ++ A A RN L +V V+ E + Q E S
Sbjct: 1 MISYKNILIAVDGSHEAEWAFNKAVGVAKRNDAQLTIVNVIDSRTYSSYEVYDAQFTEKS 60
Query: 58 GSPLIPLAEFSEPTIMKKYGAKPDPETLDIVNTVARQKQIVVVMKIFWGDPREKICEAID 117
FSE ++K Y + V+T ++ +G P+ I + +
Sbjct: 61 -------KHFSEE-LLKGYKEVATNAGVKNVDT-----------RLEFGSPKAIIPKKLA 101
Query: 118 K-IPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVK 158
+ + ++ G GL ++R I+GSVS +V + C V VV+
Sbjct: 102 RDVGADLIMSGTSGLNAVERFIVGSVSEAIVRHAPCDVLVVR 143
>sp|O74782|YGBA_SCHPO Universal stress protein A family protein C25B2.10
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC25B2.10 PE=1 SV=1
Length = 307
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 66/164 (40%), Gaps = 38/164 (23%)
Query: 1 MDGTRRVGVAVDFSACSKKALQWAADNVVRNGDHLILVTVV-PEGGLEK--GEQQLWEDS 57
MDG VAVD W + ++ + D +++ V+ P L + ++Q +
Sbjct: 146 MDGNSYSEVAVD----------WLFETLLADNDEAVVLRVIDPSSKLAEDLSDEQSYRS- 194
Query: 58 GSPLIPLAEFSEPTIMKKYGAKPDPETLDIVNTVARQKQIVVVMKIFWGDPREKICEAID 117
LAE I+KK V K + +++++ G P++ I I
Sbjct: 195 ------LAEHIMAGILKK---------------VDDDKAVSIIVELVVGKPQDMILRTIH 233
Query: 118 KIPLSCLVIGNRG--LGKLKRAI-MGSVSNYVVNNGSCPVTVVK 158
L++G RG L + + GSVS + + PV VV+
Sbjct: 234 VYSPDSLIVGTRGKALNSFQSLLSSGSVSKFCLQKSPIPVIVVR 277
>sp|Q54JM9|NIT2_DICDI Nitrilase homolog 2 OS=Dictyostelium discoideum GN=nit2 PE=3 SV=1
Length = 328
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 57 SGSPLIPLAE-FSEP---TIMKKYGAKPDPETLDIVNTVARQKQIVVVMKIFWGDPREKI 112
+G+ LI L E F+ P + +KY D ET+ ++ A++ QI +V G +I
Sbjct: 83 NGAKLISLPECFNSPYSTSTFEKYSETEDGETVKKLSEAAKRNQIFLV-----GGSIPEI 137
Query: 113 CEAIDKIPLSCLVIGNRG 130
+A KI +C + ++G
Sbjct: 138 DKATGKIYNTCFIFNDKG 155
>sp|P0A4P8|USPF_SHIFL Universal stress protein F OS=Shigella flexneri GN=uspF PE=3 SV=1
Length = 144
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 106 GDPREKICEAIDKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVK 158
G P+++I E KIP ++I + + ++GS + VV + C V VV+
Sbjct: 93 GSPKDRILELAKKIPAHMIIIASHR-PDITTYLLGSNAAAVVRHAECSVLVVR 144
>sp|P0A4P6|USPF_ECOL6 Universal stress protein F OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=uspF PE=3 SV=1
Length = 144
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 106 GDPREKICEAIDKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVK 158
G P+++I E KIP ++I + + ++GS + VV + C V VV+
Sbjct: 93 GSPKDRILELAKKIPAHMIIIASHR-PDITTYLLGSNAAAVVRHAECSVLVVR 144
>sp|Q0TI19|USPF_ECOL5 Universal stress protein F OS=Escherichia coli O6:K15:H31 (strain
536 / UPEC) GN=uspF PE=3 SV=1
Length = 144
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 106 GDPREKICEAIDKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVK 158
G P+++I E KIP ++I + + ++GS + VV + C V VV+
Sbjct: 93 GSPKDRILELAKKIPAHMIIIASHR-PDITTYLLGSNAAAVVRHAECSVLVVR 144
>sp|P0A4P7|USPF_ECO57 Universal stress protein F OS=Escherichia coli O157:H7 GN=uspF PE=3
SV=1
Length = 144
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 106 GDPREKICEAIDKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVK 158
G P+++I E KIP ++I + + ++GS + VV + C V VV+
Sbjct: 93 GSPKDRILELAKKIPAHMIIIASHR-PDITTYLLGSNAAAVVRHAECSVLVVR 144
>sp|P37903|USPF_ECOLI Universal stress protein F OS=Escherichia coli (strain K12) GN=uspF
PE=1 SV=2
Length = 144
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 106 GDPREKICEAIDKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVK 158
G P+++I E KIP ++I + + ++GS + VV + C V VV+
Sbjct: 93 GSPKDRILELAKKIPAHMIIIASHR-PDITTYLLGSNAAAVVRHAECSVLVVR 144
>sp|Q8S8S7|PUB34_ARATH U-box domain-containing protein 34 OS=Arabidopsis thaliana
GN=PUB34 PE=3 SV=1
Length = 801
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 15 ACSKKALQWAADNVVRNGDHLILVTVVP 42
A S++A++WA DN++ D +++ V+P
Sbjct: 39 AGSRRAVRWAVDNLLPKADKFVMIHVIP 66
>sp|P67091|USPF_SALTY Universal stress protein F OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=uspF PE=3 SV=1
Length = 144
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 106 GDPREKICEAIDKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVK 158
G P++KI E K+P ++I + + ++GS + VV + C V VV+
Sbjct: 93 GSPKDKILEMAKKLPADMVIIASHR-PDITTYLLGSNAAAVVRHAECSVLVVR 144
>sp|P67092|USPF_SALTI Universal stress protein F OS=Salmonella typhi GN=uspF PE=3 SV=1
Length = 144
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 106 GDPREKICEAIDKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVK 158
G P++KI E K+P ++I + + ++GS + VV + C V VV+
Sbjct: 93 GSPKDKILEMAKKLPADMVIIASHR-PDITTYLLGSNAAAVVRHAECSVLVVR 144
>sp|A0Q5M6|GPMI_FRATN 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
OS=Francisella tularensis subsp. novicida (strain U112)
GN=gpmI PE=3 SV=1
Length = 512
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 19 KALQWAADNVVRNGDHLILVTVVPEGGLEKGEQQLWE 55
KA+ A DNV++N +L L+ ++ GG+ E+ ++E
Sbjct: 94 KAIGAAIDNVIKNDSNLHLIGLLSPGGVHSHEEHIFE 130
>sp|A4IZ68|GPMI_FRATW 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
OS=Francisella tularensis subsp. tularensis (strain
WY96-3418) GN=gpmI PE=3 SV=1
Length = 512
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 19 KALQWAADNVVRNGDHLILVTVVPEGGLEKGEQQLWE 55
KA+ A DNV++N +L L+ ++ GG+ E+ ++E
Sbjct: 94 KAICAAIDNVIKNDSNLHLIGLLSPGGVHSHEEHIFE 130
>sp|Q2A2B1|GPMI_FRATH 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
OS=Francisella tularensis subsp. holarctica (strain LVS)
GN=gpmI PE=3 SV=1
Length = 512
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 19 KALQWAADNVVRNGDHLILVTVVPEGGLEKGEQQLWE 55
KA+ A DNV++N +L L+ ++ GG+ E+ ++E
Sbjct: 94 KAICAAIDNVIKNDSNLHLIGLLSPGGVHSHEEHIFE 130
>sp|A7NDJ7|GPMI_FRATF 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
OS=Francisella tularensis subsp. holarctica (strain
FTNF002-00 / FTA) GN=gpmI PE=3 SV=1
Length = 512
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 19 KALQWAADNVVRNGDHLILVTVVPEGGLEKGEQQLWE 55
KA+ A DNV++N +L L+ ++ GG+ E+ ++E
Sbjct: 94 KAICAAIDNVIKNDSNLHLIGLLSPGGVHSHEEHIFE 130
>sp|Q0BKX8|GPMI_FRATO 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
OS=Francisella tularensis subsp. holarctica (strain
OSU18) GN=gpmI PE=3 SV=1
Length = 516
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 19 KALQWAADNVVRNGDHLILVTVVPEGGLEKGEQQLWE 55
KA+ A DNV++N +L L+ ++ GG+ E+ ++E
Sbjct: 98 KAICAAIDNVIKNDSNLHLIGLLSPGGVHSHEEHIFE 134
>sp|O06188|Y2624_MYCTU Universal stress protein Rv2624c/MT2699 OS=Mycobacterium
tuberculosis GN=Rv2624c PE=1 SV=1
Length = 272
Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 10/38 (26%), Positives = 22/38 (57%)
Query: 124 LVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVKQGI 161
+ +G+ G+G+ +I+GS + + CPV V++ +
Sbjct: 106 ICVGSVGIGRYASSILGSTATELAEKAHCPVAVMRSKV 143
>sp|Q5FS37|Y1038_GLUOX Maf-like protein GOX1038 OS=Gluconobacter oxydans (strain 621H)
GN=GOX1038 PE=3 SV=1
Length = 203
Score = 30.0 bits (66), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 29 VRNGDHLILVTVVPEGGLEKGEQQLWEDSGSPLIPLAEFSEPTIMKKYGAKPDPETLDIV 88
+R H++ VV L KG +++WE SP + + +FS+ +K Y + P L V
Sbjct: 106 LRGRTHVLRTAVV----LYKGGEKVWEHLASPRLTMRDFSDD-FLKAYLEREGPAILSCV 160
>sp|P37578|CH601_MYCLE 60 kDa chaperonin 1 OS=Mycobacterium leprae (strain TN) GN=groL1
PE=3 SV=1
Length = 537
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 20/114 (17%)
Query: 56 DSGSPLIPLAEFSEPTIMKKYGAKPDPETLDIVNTVARQKQIVVVMKIFWGDPREKICEA 115
+SG PL+ +AE E + +VN++ + + V V F+GD R+ E
Sbjct: 240 ESGKPLLIVAEDLEGEALATL----------VVNSIRKTLKAVAVKSPFFGDRRKAFLED 289
Query: 116 IDKI-------PLSCLV---IGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVKQ 159
+ + P + LV +G LG +R ++ +V+ G V K+
Sbjct: 290 LAIVTGGQVVNPETGLVLREVGTDVLGSARRVVVSKDDTIIVDGGGSNDAVAKR 343
>sp|O27222|Y1154_METTH Universal stress protein MTH_1154 OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1154 PE=3 SV=1
Length = 146
Score = 29.6 bits (65), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 106 GDPREKICEAIDKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVK 158
GDP ++I + ++ + +V+G G + + ++GSVS VV+ C + +V+
Sbjct: 93 GDPADEIVKVAEEEDVDVIVMGT-GKSLVDKHLLGSVSEKVVHYAPCTIHLVR 144
>sp|Q8ZE81|USPE_YERPE Universal stress protein E OS=Yersinia pestis GN=uspE PE=3 SV=1
Length = 318
Score = 29.6 bits (65), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 106 GDPREKICEAIDKIPLSCLVIGNRGLGKLKRAIMGSVSNYVVNNGSCPVTVVK 158
G P E I + + + +V+G G L A +G+ + +V++N C + +K
Sbjct: 248 GLPEEVIPDLAEHLNAGVVVLGTLGRTGLSAAFIGNTTEHVIDNLKCDLLAIK 300
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,779,596
Number of Sequences: 539616
Number of extensions: 2748193
Number of successful extensions: 5590
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 5535
Number of HSP's gapped (non-prelim): 81
length of query: 164
length of database: 191,569,459
effective HSP length: 108
effective length of query: 56
effective length of database: 133,290,931
effective search space: 7464292136
effective search space used: 7464292136
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)