BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031170
(164 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P38042|CDC27_YEAST Anaphase-promoting complex subunit CDC27 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CDC27 PE=1
SV=2
Length = 758
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 8/134 (5%)
Query: 7 EMGKTQDARNVFEEILAGNPLSFEALFENALLMDRCGEGEAVIKRLEEALEIAEDGNKLK 66
++G+ ++A FE+ + NP+ N +L+ CG + E+AL+ E L+
Sbjct: 620 KLGQYEEALLYFEKARSINPV-------NVVLICCCGGSLEKLGYKEKALQYYELACHLQ 672
Query: 67 EARDV-RFIMAQIKFLQKNVDEALKSYQELEIEDPNDFRPYFCKGMIYSLLDRNAEAKEE 125
+ ++ M Q+ + + AL++++EL P+D ++ G Y ++ R +A +E
Sbjct: 673 PTSSLSKYKMGQLLYSMTRYNVALQTFEELVKLVPDDATAHYLLGQTYRIVGRKKDAIKE 732
Query: 126 FAKYRQLSPKKFEV 139
L PK +V
Sbjct: 733 LTVAMNLDPKGNQV 746
Score = 30.0 bits (66), Expect = 6.7, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 81 LQKNVDEALKSYQELEIEDPNDFRPYFCKGMIYSLLDRNAEAKEEFAKYRQLSPKKFEVE 140
LQK+ D A+K++++ DPN Y +G +S D + AK + K P+ +
Sbjct: 552 LQKDHDAAIKAFEKATQLDPNFAYAYTLQGHEHSSNDSSDSAKTCYRKALACDPQHY--N 609
Query: 141 GYLRTPLSRMKL 152
Y S MKL
Sbjct: 610 AYYGLGTSAMKL 621
>sp|Q3UV71|TMTC1_MOUSE Transmembrane and TPR repeat-containing protein 1 OS=Mus musculus
GN=Tmtc1 PE=2 SV=2
Length = 942
Score = 37.0 bits (84), Expect = 0.054, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 51 RLEEALEIAEDGNKLKEA-RDVRFIMAQIKFLQKNVDEALKSYQELEIEDPNDFRPYFCK 109
R +EALE+ + L+ + R++R +AQ+ + EA K + E+P Y
Sbjct: 758 RHKEALEVYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLECYRLL 817
Query: 110 GMIYSLLDRNAEAKEEFAKYRQLSPKKFEV 139
I+S + + +A E K QL PK +V
Sbjct: 818 SAIHSKQEHHGKALEAIEKALQLKPKDPKV 847
Score = 32.7 bits (73), Expect = 1.1, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 60/134 (44%), Gaps = 2/134 (1%)
Query: 1 MARLLSEMGKTQDARNVFEEILAGNPLSFEALFENALLMDRCGEGEAVIKRLEEALEIAE 60
+A++L+ MG+T++A + I++ P E + + + ++ +E+AL++
Sbjct: 783 LAQVLAVMGQTKEAEKITSHIVSEEPRCLECYRLLSAIHSKQEHHGKALEAIEKALQLKP 842
Query: 61 DGNKLKEARDVRFIMAQIKFLQKNVDEALKSYQELEIEDPNDFRPYFCKGMIYSLLDRNA 120
K+ ++ F Q +D+A +SY+ DP+ + + G I +
Sbjct: 843 KDPKV--ISELFFTKGNQLREQNLLDKAFESYEAAVTLDPDQAQAWMNMGGIRHIQGSYV 900
Query: 121 EAKEEFAKYRQLSP 134
A+ + + +L P
Sbjct: 901 SARAYYERALKLVP 914
>sp|P31759|FRZF_MYXXA Protein methyltransferase FrzF OS=Myxococcus xanthus GN=frzF PE=4
SV=1
Length = 593
Score = 36.6 bits (83), Expect = 0.076, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 72 RFIMAQIKFLQKNVDEALKSYQELEIEDPNDFRPYFCKGMIYSLLDRNAEAKEEFAKYRQ 131
R MA K Q + A+ Q L ++P+D G ++SL R EA+E FA+ Q
Sbjct: 426 RLAMAVRKMAQGDFSAAIAGVQRLLADEPSDLDGLLTLGNLFSLTGRIPEAREAFAQAIQ 485
Query: 132 LSP 134
P
Sbjct: 486 REP 488
>sp|Q8IUR5|TMTC1_HUMAN Transmembrane and TPR repeat-containing protein 1 OS=Homo sapiens
GN=TMTC1 PE=1 SV=3
Length = 882
Score = 36.2 bits (82), Expect = 0.097, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 51 RLEEALEIAEDGNKLKEA-RDVRFIMAQIKFLQKNVDEALKSYQELEIEDPNDFRPYFCK 109
R EEAL+I ++ L+ + R++R +AQ+ + EA K + E+ Y
Sbjct: 698 RYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLL 757
Query: 110 GMIYSLLDRNAEAKEEFAKYRQLSPKKFEV 139
IYS + + +A + K QL PK +V
Sbjct: 758 SAIYSKQENHDKALDAIDKALQLKPKDPKV 787
>sp|O42668|TPR1_SCHPO Tetratricopeptide repeat protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tpr1 PE=1 SV=1
Length = 1039
Score = 33.1 bits (74), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 76 AQIKFLQKNVDEALKSYQELEIEDPNDFRP--YFCKGMIYSLLDRNAEAKEEFAKYRQLS 133
A+I + + N ALK YQ + +P F+P G+ + LD +A + + +QL
Sbjct: 182 ARILYAKGNYRSALKLYQRALVSNPQ-FKPDPRIGIGLCFWNLDMKTDALSAWTRVQQLD 240
Query: 134 PKKFEVEGYL 143
PK V+ Y+
Sbjct: 241 PKNTVVDTYI 250
>sp|Q9XIA9|LACS2_ARATH Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana GN=LACS2
PE=2 SV=1
Length = 665
Score = 33.1 bits (74), Expect = 0.88, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
Query: 87 EALKSYQELEIEDPNDFRPYFC---KGMIYSLLDRNAEAKE------EFAKYRQLSPKKF 137
+A++ + +L + PNDF C K Y L + N+ AK+ E K L P F
Sbjct: 569 KAIEDWAKLNYQSPNDFES-LCQNLKAQKYFLDELNSTAKQYQLKGFEMLKAIHLEPNPF 627
Query: 138 EVEGYLRTPLSRMK 151
++E L TP ++K
Sbjct: 628 DIERDLITPTFKLK 641
>sp|Q8LGU6|CD27B_ARATH Cell division cycle protein 27 homolog B OS=Arabidopsis thaliana
GN=CDC27B PE=1 SV=1
Length = 744
Score = 32.7 bits (73), Expect = 0.97, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 35 NALLMDRCGEGEAVIKRLEEALEIAEDGNKLKEARDV-RFIMAQIKFLQKNVDEALKSYQ 93
++++M G +KR EEALEI E + + A I + +DEAL+ +
Sbjct: 619 SSVIMSYLGTSLHALKRSEEALEIMEQAIVADRKNPLPMYQKANILVCLERLDEALEVLE 678
Query: 94 ELEIEDPNDFRPYFCKGMIYSLLDRNAEAKEEFAKYRQLSPKKFEV 139
EL+ P++ Y G IY + + +A F + P +V
Sbjct: 679 ELKEYAPSESSVYALMGRIYKRRNMHDKAMLHFGLALDMKPPATDV 724
>sp|Q58741|Y1345_METJA TPR repeat-containing protein MJ1345 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1345 PE=4 SV=1
Length = 314
Score = 32.7 bits (73), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 4 LLSEMGKTQDARNVFEEILAGNPLSFEALFENALLMDRCGEGEAVIKRLEEALEIAEDGN 63
+L GK + + F+ L NP ++L ++ + G +K L++ E
Sbjct: 156 ILYREGKLKKSLECFDNALKINPKDCQSLLYKGEILFKLGRYGEALKCLKKVFE------ 209
Query: 64 KLKEARDVRFIMAQIKFL--QKNVDEALKSYQELEIEDPNDFRPYFCKGMIYSLLDRNAE 121
+ +D+R +M I+ L +++AL+ ++ +P+D Y KG+I + L + E
Sbjct: 210 --RNNKDIRALMYIIQILIYLGRLNQALEYTKKALKLNPDDPLLYLYKGIILNKLGKYNE 267
Query: 122 AKEEFAKYRQLSP 134
A + F K +++P
Sbjct: 268 AIKYFDKVLEINP 280
>sp|Q86TZ1|TTC6_HUMAN Tetratricopeptide repeat protein 6 OS=Homo sapiens GN=TTC6 PE=2
SV=1
Length = 520
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 7/130 (5%)
Query: 5 LSEMGKTQDARNVFEEILAGNPLSFEALFENALLMDRCGEGEAVIKRLEEALEIAEDGNK 64
L GK Q A N F + +P ++ A A++ + G A ++ + A++I+
Sbjct: 291 LQAQGKFQKAWNHFTIAIDTDPKNYLAYEGRAVVCLQMGNNFAAMQDINAAMKISTTAEF 350
Query: 65 LKEARDVRFIMAQIKFLQKNVDEALKSYQELEIEDPNDFRPYFCKGMIYSLLDRNAEAKE 124
L + M + A+K YQ+ +P YF G IY + ++A +
Sbjct: 351 LTNRGVIHEFMGHKQ-------NAMKDYQDAITLNPKYSLAYFNAGNIYFHHRQFSQASD 403
Query: 125 EFAKYRQLSP 134
F+K + P
Sbjct: 404 YFSKALKFDP 413
>sp|Q8S8L9|Y2245_ARATH Uncharacterized TPR repeat-containing protein At2g32450
OS=Arabidopsis thaliana GN=At2g32450 PE=1 SV=1
Length = 802
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 59 AEDGNKLKEARDVRFIMAQIKFLQKNVDEALKSYQELEIEDPNDFRPYFCKGMIYSLLDR 118
A+ +EA D + ++ + + EAL S++ P D RP+F G +L +
Sbjct: 219 ADGARSREEAFDGHMAIGKVLYEHQLFKEALVSFKRACELQPTDVRPHFKAGNCLYVLGK 278
Query: 119 NAEAKEEF 126
E+K+EF
Sbjct: 279 YKESKDEF 286
>sp|O23052|Y1515_ARATH Uncharacterized TPR repeat-containing protein At1g05150
OS=Arabidopsis thaliana GN=At1g05150 PE=1 SV=1
Length = 808
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 59 AEDGNKLKEARDVRFIMAQIKFLQKNVDEALKSYQELEIEDPNDFRPYFCKGMIYSLLDR 118
A+ +EA D + ++ + + EAL S++ P D RP+F G +L +
Sbjct: 224 ADGARSREEAFDGHMAIGRVLYEHQLFKEALVSFKRACELQPTDVRPHFKAGNCLYVLGK 283
Query: 119 NAEAKEEF 126
E+K+EF
Sbjct: 284 CKESKDEF 291
>sp|P58938|BCSC_XANAC Cellulose synthase operon protein C OS=Xanthomonas axonopodis pv.
citri (strain 306) GN=bcsC PE=3 SV=1
Length = 1508
Score = 31.6 bits (70), Expect = 2.5, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 1 MARLLSEMGKTQDARNVFEEILAGNPLSFEALFENALLMDRCGEGEAVIKRLE 53
+ARL + G+ AR+V + +LA + EAL NALL G+ + L+
Sbjct: 505 LARLYQQAGRPDQARSVMDGLLAVHGDQPEALHANALLAQESGDWQGAYDSLD 557
>sp|O76094|SRP72_HUMAN Signal recognition particle 72 kDa protein OS=Homo sapiens GN=SRP72
PE=1 SV=3
Length = 671
Score = 30.8 bits (68), Expect = 4.4, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 5 LSEMGKTQDARNVFE---EILAGNPLSFEALFENALLMDRCGEGEAVIKRLEEALEIAED 61
L + G ++A NV ++LA N LSFE + C E + R+E AL+ E
Sbjct: 55 LIQNGSFKEALNVINTHTKVLANNSLSFEKAY--------C---EYRLNRIENALKTIES 103
Query: 62 GNKLKEARDVRFIMAQIKFLQKNVDEALKSYQELEIEDPNDF 103
N ++ ++ + Q+ + + DE L Y++L +D+
Sbjct: 104 AN--QQTDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDY 143
>sp|Q5A1D5|SPT16_CANAL FACT complex subunit SPT16 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=SPT16 PE=3 SV=1
Length = 1060
Score = 30.8 bits (68), Expect = 4.5, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 44 EGEAVIK-RLEEALEIAEDGNKLKEARDVRFIMAQIKFLQKNVDEALKSYQELEIEDPND 102
E A++K +L A+D N K +++ QIK +K + E L + + + D +D
Sbjct: 493 ENTAILKSKLRHENTNADDANSEKLRQEI-----QIKLHEKRLQEGLARFSKADATDADD 547
Query: 103 FRPYFCK 109
F+P F K
Sbjct: 548 FKPIFKK 554
>sp|Q9BZJ0|CRNL1_HUMAN Crooked neck-like protein 1 OS=Homo sapiens GN=CRNKL1 PE=1 SV=4
Length = 848
Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 18 FEEILAGNPLSFEALFENALLMDRCGEGEAVIKRLEEALEIAEDGNKLKEARDV-RFIMA 76
+EE + NP +++A F+ L++ E EAV + E A+ + ++E R R+I
Sbjct: 480 YEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAI---ANVPPIQEKRHWKRYIYL 536
Query: 77 QIKFLQKNVDEALKSYQELEIEDPNDFRPYF 107
I + AL Y+ELE +DP R +
Sbjct: 537 WINY-------AL--YEELEAKDPERTRQVY 558
>sp|P33731|SRP72_CANFA Signal recognition particle 72 kDa protein OS=Canis familiaris
GN=SRP72 PE=1 SV=3
Length = 671
Score = 30.4 bits (67), Expect = 5.3, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 5 LSEMGKTQDARNVFE---EILAGNPLSFEALFENALLMDRCGEGEAVIKRLEEALEIAED 61
L + G ++A NV ++LA N LSFE + C E + R+E AL+ E
Sbjct: 55 LIQNGSFKEALNVINTHTKVLANNSLSFEKAY--------C---EYRLNRIENALKTIES 103
Query: 62 GNKLKEARDVRFIMAQIKFLQKNVDEALKSYQELEIEDPNDF 103
N ++ ++ + Q+ + + DE L Y++L +D+
Sbjct: 104 AN--QQTDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDY 143
>sp|P54220|AROA_PASHA 3-phosphoshikimate 1-carboxyvinyltransferase OS=Pasteurella
haemolytica GN=aroA PE=3 SV=2
Length = 432
Score = 30.4 bits (67), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 28/107 (26%)
Query: 44 EGEAVIK-----RLEE-------ALEIAEDGNKLKEARDVRFIMAQIKFLQKNVDEALKS 91
EGE VI+ R++E A E+ + G +++E D FI Q AL++
Sbjct: 330 EGETVIRNIYNWRVKETDRLTAMATELRKVGAEVEEGED--FIRIQ--------PLALEN 379
Query: 92 YQELEIEDPNDFRPYFCKGMI------YSLLDRNAEAKEEFAKYRQL 132
+Q EIE ND R C +I ++LD N AK +R+L
Sbjct: 380 FQHAEIETYNDHRMAMCFSLIALSNTEVTILDPNCTAKTFPTYFREL 426
>sp|Q6ZXV5|TMTC3_HUMAN Transmembrane and TPR repeat-containing protein 3 OS=Homo sapiens
GN=TMTC3 PE=1 SV=2
Length = 915
Score = 30.4 bits (67), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 82 QKNVDEALKSYQELEIEDPNDFRPYFCKGMIYSLLDRNAEAKEEFAKYRQLSPK 135
+KN + ALK + + P+D + G Y L+R EA+E + + L P+
Sbjct: 459 EKNFERALKYFLQATHVQPDDIGAHMNVGRTYKNLNRTKEAEESYMMAKSLMPQ 512
>sp|Q96AY4|TTC28_HUMAN Tetratricopeptide repeat protein 28 OS=Homo sapiens GN=TTC28 PE=1
SV=4
Length = 2481
Score = 30.4 bits (67), Expect = 6.0, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 11/110 (10%)
Query: 43 GEGEAVIKRLEEALEIAEDGNKLKEARDVRFIMAQIKFLQKNVDEALKSYQELEIEDPND 102
G+ I EAL + L R ++ +I+ K +D+A+K+ + +P
Sbjct: 72 GDFHTAIVLYNEALAVDPQNCILYSNRSAAYM--KIQQYDKALDDAIKA----RLLNPKW 125
Query: 103 FRPYFCKGMIYSLLDRNAEAKEEFAKYRQLSPKKFE-----VEGYLRTPL 147
+ YF +G+ L R+A+A FA PK + VE +++P+
Sbjct: 126 PKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPM 175
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 30.0 bits (66), Expect = 6.2, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 1 MARLLSEMGKTQDARNVFEEILAGNPLSFEALFENALLMDRCGEGEAVIKRLEE 54
+ L + GK +AR +FE++ A + +S+ AL + GE + + K ++E
Sbjct: 326 LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKE 379
>sp|Q4V8A2|CDC27_RAT Cell division cycle protein 27 homolog OS=Rattus norvegicus
GN=Cdc27 PE=2 SV=1
Length = 824
Score = 30.0 bits (66), Expect = 6.3, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 18 FEEILAGNPLSFEALFENALLMDRCGEGEAVIKRLEEALEIAEDGNKLKEARDV-RFIMA 76
F++ L NP ++++L+ G + +K+ E+AL+ + + +F A
Sbjct: 658 FQKALDINP-------QSSVLLCHIGVVQHALKKSEKALDTLNKAIVIDPKNPLCKFHRA 710
Query: 77 QIKFLQKNVDEALKSYQELEIEDPNDFRPYFCKGMIYSLLDRNAEAKEEFAKYRQLSPK 135
+ F + AL+ +EL+ P + YF G +Y L + A F+ L PK
Sbjct: 711 SVLFANEKYKSALQELEELKQIVPKESLVYFLIGKVYKKLGQTHLALMNFSWAMDLDPK 769
>sp|A2A6Q5|CDC27_MOUSE Cell division cycle protein 27 homolog OS=Mus musculus GN=Cdc27
PE=1 SV=1
Length = 825
Score = 30.0 bits (66), Expect = 6.3, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 18 FEEILAGNPLSFEALFENALLMDRCGEGEAVIKRLEEALEIAEDGNKLKEARDV-RFIMA 76
F++ L NP ++++L+ G + +K+ E+AL+ + + +F A
Sbjct: 659 FQKALDINP-------QSSVLLCHIGVVQHALKKSEKALDTLNKAIVIDPKNPLCKFHRA 711
Query: 77 QIKFLQKNVDEALKSYQELEIEDPNDFRPYFCKGMIYSLLDRNAEAKEEFAKYRQLSPK 135
+ F + AL+ +EL+ P + YF G +Y L + A F+ L PK
Sbjct: 712 SVLFANEKYKSALQELEELKQIVPKESLVYFLIGKVYKKLGQTHLALMNFSWAMDLDPK 770
>sp|A7Z061|CDC27_BOVIN Cell division cycle protein 27 homolog OS=Bos taurus GN=CDC27 PE=2
SV=1
Length = 825
Score = 30.0 bits (66), Expect = 6.5, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 18 FEEILAGNPLSFEALFENALLMDRCGEGEAVIKRLEEALEIAEDGNKLKEARDV-RFIMA 76
F++ L NP ++++L+ G + +K+ E+AL+ + + +F A
Sbjct: 659 FQKALDINP-------QSSVLLCHIGVVQHALKKSEKALDTLNKAIVIDPKNPLCKFHRA 711
Query: 77 QIKFLQKNVDEALKSYQELEIEDPNDFRPYFCKGMIYSLLDRNAEAKEEFAKYRQLSPK 135
+ F + AL+ +EL+ P + YF G +Y L + A F+ L PK
Sbjct: 712 SVLFANEKYKSALQELEELKQIVPKESLVYFLIGKVYKKLGQTHLALMNFSWAMDLDPK 770
>sp|P30260|CDC27_HUMAN Cell division cycle protein 27 homolog OS=Homo sapiens GN=CDC27
PE=1 SV=2
Length = 824
Score = 30.0 bits (66), Expect = 6.6, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 18 FEEILAGNPLSFEALFENALLMDRCGEGEAVIKRLEEALEIAEDGNKLKEARDV-RFIMA 76
F++ L NP ++++L+ G + +K+ E+AL+ + + +F A
Sbjct: 658 FQKALDINP-------QSSVLLCHIGVVQHALKKSEKALDTLNKAIVIDPKNPLCKFHRA 710
Query: 77 QIKFLQKNVDEALKSYQELEIEDPNDFRPYFCKGMIYSLLDRNAEAKEEFAKYRQLSPK 135
+ F + AL+ +EL+ P + YF G +Y L + A F+ L PK
Sbjct: 711 SVLFANEKYKSALQELEELKQIVPKESLVYFLIGKVYKKLGQTHLALMNFSWAMDLDPK 769
>sp|Q8BSY0|ASPH_MOUSE Aspartyl/asparaginyl beta-hydroxylase OS=Mus musculus GN=Asph PE=2
SV=1
Length = 741
Score = 29.6 bits (65), Expect = 8.0, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 5/138 (3%)
Query: 2 ARLLSEMGKTQDARNVFEEILAGNPLSFEALFENALLMDRCGEGEAVIKRLEEALEIAED 61
A L + GK ++A N FEE++ P S A + A D E + + L A+E ++
Sbjct: 331 AEKLRKRGKIEEAVNAFEELVRKYPQSPRARYGKAQCEDDLAEKQRSNEVLRRAIETYQE 390
Query: 62 GNKLKEARD--VRFIMAQIKFLQK---NVDEALKSYQELEIEDPNDFRPYFCKGMIYSLL 116
L +A V+ + + Q+ ++ +L + Q L P+D G+ Y LL
Sbjct: 391 AADLPDAPTDLVKLSLKRRSERQQFLGHMRGSLLTLQRLVQLFPSDTTLKNDLGVGYLLL 450
Query: 117 DRNAEAKEEFAKYRQLSP 134
N AK+ + + ++P
Sbjct: 451 GDNDSAKKVYEEVLNVTP 468
>sp|B5YHH6|GSA_THEYD Glutamate-1-semialdehyde 2,1-aminomutase OS=Thermodesulfovibrio
yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)
GN=hemL PE=3 SV=1
Length = 427
Score = 29.6 bits (65), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 22 LAGNPLSFEALFENALLMDRCGEGEAVIKRLEEALEIAEDGNK--LKEAR-DVRFIMAQI 78
L+GNP++ A E ++ + +V KRLE+ ++ E+G K K+A +V+F A
Sbjct: 300 LSGNPIAMTAGIETLKVLSKA----SVYKRLEKTMQYLEEGLKDSAKQAGINVKFYRAGT 355
Query: 79 KFLQKNVDEALKSYQELEIEDPNDFRPYFCKGMI 112
F + + + + D F+ +F GM+
Sbjct: 356 MFCTYFTENEVIDAKTAKTSDTEKFKQFFL-GML 388
>sp|Q5I0X7|TTC32_HUMAN Tetratricopeptide repeat protein 32 OS=Homo sapiens GN=TTC32 PE=2
SV=1
Length = 151
Score = 29.6 bits (65), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 76 AQIKFLQKNVDEALKSYQELEIEDPNDFRPYFCKGMIYSLLDRNAEAKEEFAKYRQLSP 134
QIK+ + + EA+ Y PN PY+ +G+I L +A E+F K L+P
Sbjct: 65 GQIKYFRVDFYEAMDDYTSAIEVQPNFEVPYYNRGLILYRLGYFDDALEDFKKVLDLNP 123
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,082,369
Number of Sequences: 539616
Number of extensions: 2433378
Number of successful extensions: 7942
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 7864
Number of HSP's gapped (non-prelim): 159
length of query: 164
length of database: 191,569,459
effective HSP length: 108
effective length of query: 56
effective length of database: 133,290,931
effective search space: 7464292136
effective search space used: 7464292136
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)