BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031172
MVKLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQVAAKSCSYTVIIKTSCSSKSY
TRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDG
WKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGSAVV

High Scoring Gene Products

Symbol, full name Information P value
AT2G41475 protein from Arabidopsis thaliana 2.5e-49
AT5G62200 protein from Arabidopsis thaliana 6.4e-44
AT5G62210 protein from Arabidopsis thaliana 9.4e-27
ATS3
AT5G07190
protein from Arabidopsis thaliana 3.8e-23

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031172
        (164 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:4515102981 - symbol:AT2G41475 "AT2G41475" spec...   514  2.5e-49   1
TAIR|locus:2167908 - symbol:AT5G62200 "AT5G62200" species...   463  6.4e-44   1
TAIR|locus:2167928 - symbol:AT5G62210 "AT5G62210" species...   301  9.4e-27   1
TAIR|locus:2182865 - symbol:ATS3 "AT5G07190" species:3702...   267  3.8e-23   1


>TAIR|locus:4515102981 [details] [associations]
            symbol:AT2G41475 "AT2G41475" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0009506 "plasmodesma"
            evidence=IDA] InterPro:IPR001024 GO:GO:0009506 EMBL:CP002685
            Gene3D:2.60.60.20 InterPro:IPR008976 SUPFAM:SSF49723 EMBL:AK175164
            EMBL:AK175615 EMBL:AK175765 EMBL:AK221826 EMBL:AK221888
            EMBL:AK228257 IPI:IPI00521526 RefSeq:NP_001118501.1
            UniGene:At.43627 ProteinModelPortal:Q681K2 PRIDE:Q681K2
            EnsemblPlants:AT2G41475.1 GeneID:6240499 KEGG:ath:AT2G41475
            TAIR:At2g41475 OMA:CYLYLLR PhylomeDB:Q681K2 ProtClustDB:CLSN2925507
            Genevestigator:Q681K2 InterPro:IPR010417 Pfam:PF06232
            Uniprot:Q681K2
        Length = 179

 Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
 Identities = 97/145 (66%), Positives = 114/145 (78%)

Query:    18 SHAGSSIIS-PTEIKSFEPKTVQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNE 76
             S A S I + P  I SF PK     A +CSYTVIIKTSCSS SYTRDKIS++FGD YGNE
Sbjct:    20 SSARSFITTKPLPIDSFIPKPKLENAAACSYTVIIKTSCSSVSYTRDKISISFGDVYGNE 79

Query:    77 VYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTV 136
             VY+KRLDDP SRTFE CS+DT++ISGPC  D+CY YLLR GSDGWKPE+VKI G +IR+V
Sbjct:    80 VYVKRLDDPSSRTFEKCSSDTYKISGPCMRDVCYLYLLRQGSDGWKPENVKIYGSSIRSV 139

Query:   137 TFFYNTFIPDGVWFGFNQCRRGSGS 161
             TF+YN F+P+ VW+GFN C  G G+
Sbjct:   140 TFYYNLFLPNSVWYGFNVCN-GIGN 163


>TAIR|locus:2167908 [details] [associations]
            symbol:AT5G62200 "AT5G62200" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0031225 "anchored to
            membrane" evidence=TAS] [GO:0005774 "vacuolar membrane"
            evidence=IDA] [GO:0009611 "response to wounding" evidence=RCA]
            [GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA]
            InterPro:IPR001024 GO:GO:0005774 EMBL:CP002688 GO:GO:0031225
            Gene3D:2.60.60.20 InterPro:IPR008976 SUPFAM:SSF49723
            InterPro:IPR010417 Pfam:PF06232 EMBL:BT010895 EMBL:AK175131
            EMBL:AK176035 IPI:IPI00523516 RefSeq:NP_201026.1 UniGene:At.29064
            ProteinModelPortal:Q6NPM5 STRING:Q6NPM5 PRIDE:Q6NPM5
            EnsemblPlants:AT5G62200.1 GeneID:836341 KEGG:ath:AT5G62200
            OMA:NGPCTYQ ProtClustDB:CLSN2916759 Genevestigator:Q6NPM5
            Uniprot:Q6NPM5
        Length = 190

 Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
 Identities = 81/144 (56%), Positives = 103/144 (71%)

Query:    22 SSIISPTEI-KSFEPKTVQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIK 80
             S ++ P  + +SF    +Q    +C+YTVII TSCSS  YTRD+IS+AFGD YGN++Y  
Sbjct:    24 SKVLDPPHVAESFNVSLIQKLGNTCAYTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAP 83

Query:    81 RLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFY 140
             RLDDP ++TFE CS+DTFQI+GPCTY ICY YL RSG DGW P +VKI     + VTF Y
Sbjct:    84 RLDDPSTKTFEQCSSDTFQINGPCTYQICYVYLYRSGPDGWIPNTVKIYSHGSKAVTFPY 143

Query:   141 NTFIPDGVWFGFNQCRRGSGSAVV 164
             NT++P+ VW+GFN C   S S V+
Sbjct:   144 NTYVPESVWYGFNYCNSASDSNVL 167


>TAIR|locus:2167928 [details] [associations]
            symbol:AT5G62210 "AT5G62210" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0031225
            "anchored to membrane" evidence=TAS] [GO:0080167 "response to
            karrikin" evidence=IEP] [GO:0009611 "response to wounding"
            evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
            evidence=RCA] [GO:0009718 "anthocyanin-containing compound
            biosynthetic process" evidence=RCA] [GO:0009744 "response to
            sucrose stimulus" evidence=RCA] [GO:0010224 "response to UV-B"
            evidence=RCA] InterPro:IPR001024 EMBL:CP002688 GO:GO:0031225
            GO:GO:0080167 EMBL:AB019235 Gene3D:2.60.60.20 InterPro:IPR008976
            SUPFAM:SSF49723 InterPro:IPR010417 Pfam:PF06232 EMBL:AY086825
            IPI:IPI00532880 RefSeq:NP_201027.1 UniGene:At.8930
            ProteinModelPortal:Q9LVB5 SMR:Q9LVB5 PRIDE:Q9LVB5 ProMEX:Q9LVB5
            EnsemblPlants:AT5G62210.1 GeneID:836342 KEGG:ath:AT5G62210
            TAIR:At5g62210 InParanoid:Q9LVB5 OMA:HEEESCP PhylomeDB:Q9LVB5
            ProtClustDB:CLSN2687047 Genevestigator:Q9LVB5 Uniprot:Q9LVB5
        Length = 223

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 58/134 (43%), Positives = 83/134 (61%)

Query:    27 PTEIKSFEPKTVQV---AAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLD 83
             P    +FEP    +     +SC YTVI+ TSC S  ++RD++++A GDA  N+V   RLD
Sbjct:    19 PIPSLTFEPLISSLDLHEEESCPYTVIVTTSCFSPDWSRDQVTIALGDADDNQVVAPRLD 78

Query:    84 DPYSRT--FESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYN 141
              P S    FE CS+DTFQ+ G C   IC  Y+ RSG+DGW PE+V+I  +  ++V F +N
Sbjct:    79 KPLSGGGGFEKCSSDTFQVKGKCLNTICSVYIYRSGTDGWIPETVEIYKEGSKSVKFDFN 138

Query:   142 TFIPDGVWFGFNQC 155
               +P+ +W+G N C
Sbjct:   139 KNVPENIWYGNNYC 152


>TAIR|locus:2182865 [details] [associations]
            symbol:ATS3 "AT5G07190" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0009793 "embryo development ending in seed
            dormancy" evidence=RCA;TAS] [GO:0031225 "anchored to membrane"
            evidence=TAS] [GO:0016020 "membrane" evidence=IDA] [GO:0009737
            "response to abscisic acid stimulus" evidence=RCA] [GO:0009845
            "seed germination" evidence=RCA] [GO:0010162 "seed dormancy
            process" evidence=RCA] EMBL:CP002688 GO:GO:0031225 EMBL:AL163652
            GO:GO:0009793 InterPro:IPR008976 SUPFAM:SSF49723 InterPro:IPR010417
            Pfam:PF06232 ProtClustDB:CLSN2687047 IPI:IPI00523243 PIR:T48490
            RefSeq:NP_196336.1 UniGene:At.5049 ProteinModelPortal:Q9LYP6
            STRING:Q9LYP6 PRIDE:Q9LYP6 ProMEX:Q9LYP6 EnsemblPlants:AT5G07190.1
            GeneID:830610 KEGG:ath:AT5G07190 TAIR:At5g07190 OMA:SIEIYSE
            PhylomeDB:Q9LYP6 Genevestigator:Q9LYP6 Uniprot:Q9LYP6
        Length = 213

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 52/128 (40%), Positives = 76/128 (59%)

Query:    32 SFEPKTVQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRT-- 89
             +F+   +Q+   +C YTV++ TSC S   TRD+IS+ FGDA GN+VY  +L         
Sbjct:    21 AFDLSIIQMQQGTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGG 80

Query:    90 FESCSTDTFQISGPCTYD-ICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPD-G 147
                CST+TFQ+ G C  D IC  Y+ R+G DGW PES++I  +  ++V F ++  +P   
Sbjct:    81 LGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLN 140

Query:   148 VWFGFNQC 155
              W+G N C
Sbjct:   141 TWYGHNNC 148


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.134   0.416    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      164       150   0.00087  104 3  11 22  0.46    31
                                                     30  0.39    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  584 (62 KB)
  Total size of DFA:  152 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.51u 0.21s 15.72t   Elapsed:  00:00:01
  Total cpu time:  15.51u 0.21s 15.72t   Elapsed:  00:00:01
  Start:  Fri May 10 14:16:24 2013   End:  Fri May 10 14:16:25 2013

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