BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031177
MLKITSKGFFKKSIIMESQKKKLVMGFFGFLLTIISFASNVEAWTGEIHGRVVCDVCGDS
SIGPEDHVLEGAEVAVLCITKSGEVLNYQAFTNAKGMYTVAETMPESDRWDACLARPISS
FHDHCSHLGEGSAGVKFTYNHPSGYFHTVKPFVYRHASVPTYCI

High Scoring Gene Products

Symbol, full name Information P value
AT5G54855 protein from Arabidopsis thaliana 6.8e-56

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031177
        (164 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006692 - symbol:AT5G54855 "AT5G54855" speci...   576  6.8e-56   1


>TAIR|locus:505006692 [details] [associations]
            symbol:AT5G54855 "AT5G54855" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688 InterPro:IPR006041
            Pfam:PF01190 EMBL:AF410270 EMBL:AY093718 EMBL:AK118946
            IPI:IPI00536003 RefSeq:NP_568813.1 UniGene:At.26528 PRIDE:Q94EJ3
            EnsemblPlants:AT5G54855.1 GeneID:835576 KEGG:ath:AT5G54855
            TAIR:At5g54855 HOGENOM:HOG000239020 InParanoid:Q94EJ3 OMA:YQAFTNS
            PhylomeDB:Q94EJ3 ProtClustDB:CLSN2690017 Genevestigator:Q94EJ3
            Uniprot:Q94EJ3
        Length = 146

 Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
 Identities = 107/148 (72%), Positives = 122/148 (82%)

Query:    16 MESQKKKLVMGFFGFLLTIISFASNVEAWTGEIHGRVVCDVCGDSSIGPEDHVLEGAEVA 75
             M+S+ +  VMG F  ++T I   S V AWTGEI GRVVCDVC DSSIGPEDHVLEGAEVA
Sbjct:     1 MDSKLRNFVMGLF--VMTAILNNSGVGAWTGEIRGRVVCDVCADSSIGPEDHVLEGAEVA 58

Query:    76 VLCITKSGEVLNYQAFTNAKGMYTVAETMPESDRWDACLARPISSFHDHCSHLGEGSAGV 135
             VLCITKSGEV+NYQAFTN+KG+YTVAETMPES+RWDACLARPISSFH  C+ L + + G+
Sbjct:    59 VLCITKSGEVVNYQAFTNSKGVYTVAETMPESERWDACLARPISSFHTPCNRLHQTNTGI 118

Query:   136 KFTYNHPSGYFHTVKPFVYRHASVPTYC 163
             KFTYN PSG+FH VKPFVYR    P+YC
Sbjct:   119 KFTYNRPSGFFHAVKPFVYRPQYAPSYC 146


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.136   0.428    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      164       164   0.00088  107 3  11 22  0.48    31
                                                     30  0.45    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  598 (64 KB)
  Total size of DFA:  166 KB (2098 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.96u 0.16s 16.12t   Elapsed:  00:00:00
  Total cpu time:  15.96u 0.16s 16.12t   Elapsed:  00:00:00
  Start:  Fri May 10 14:25:41 2013   End:  Fri May 10 14:25:41 2013

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