Query 031177
Match_columns 164
No_of_seqs 106 out of 232
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 16:24:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031177.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031177hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3irp_X URO-adherence factor A; 93.0 0.35 1.2E-05 42.7 8.4 56 43-101 303-358 (429)
2 3uaf_A TTR-52; beta barrel/san 92.8 0.13 4.3E-06 38.0 4.4 48 45-102 4-56 (117)
3 3e8v_A Possible transglutamina 92.1 0.36 1.2E-05 33.7 5.7 38 64-102 10-48 (82)
4 3kcp_A Cellulosomal-scaffoldin 86.1 0.61 2.1E-05 40.0 3.9 51 45-104 157-208 (321)
5 1h8l_A Carboxypeptidase GP180 72.0 1.6 5.4E-05 37.1 1.9 43 46-103 301-343 (380)
6 1uwy_A Carboxypeptidase M; met 71.5 1.1 3.8E-05 38.9 0.8 45 46-104 296-340 (426)
7 2nsm_A Carboxypeptidase N cata 68.0 2.2 7.4E-05 37.1 1.9 43 46-104 321-363 (439)
8 3mn8_A LP15968P; catalytic dom 61.5 6.7 0.00023 34.1 3.8 43 46-103 337-379 (435)
9 4ank_A Transthyretin; hormone 55.1 23 0.00078 26.8 5.4 35 65-99 41-76 (147)
10 3flo_A DNA polymerase alpha su 54.7 36 0.0012 30.3 7.4 56 41-97 44-113 (460)
11 2g2n_A Transthyretin-like prot 53.9 26 0.0009 25.4 5.4 35 65-99 15-49 (114)
12 2pz4_A Protein GBS052; SPAB, G 49.6 45 0.0016 26.2 6.7 38 64-101 27-83 (239)
13 1f86_A Transthyretin Thr119Met 45.0 45 0.0015 24.1 5.4 35 65-99 12-47 (115)
14 3iwv_A 5-hydroxyisourate hydro 44.2 41 0.0014 25.2 5.3 35 65-99 37-73 (138)
15 3t63_M 3,4-PCD, protocatechuat 43.8 50 0.0017 26.8 6.1 48 45-101 77-140 (238)
16 1oo2_A Transthyretin; retinol- 42.3 48 0.0016 24.1 5.2 35 65-99 13-48 (119)
17 2boy_A 3-chlorocatechol 1,2-di 40.5 51 0.0017 27.0 5.7 47 46-101 103-160 (254)
18 2h4e_A Transthyretin; amyloid, 39.8 58 0.002 24.0 5.4 35 65-99 21-56 (127)
19 3rgh_A Filamin-A; cell adhesio 39.4 45 0.0015 22.7 4.5 34 71-104 50-83 (100)
20 2ds4_A Tripartite motif protei 39.2 47 0.0016 22.5 4.6 34 72-105 63-96 (113)
21 2bp3_A Filamin A; structural p 38.7 41 0.0014 22.5 4.2 32 74-105 49-80 (97)
22 2dia_A Filamin-B; beta-sandwic 38.4 40 0.0014 23.3 4.2 37 70-106 52-88 (113)
23 3kpt_A Collagen adhesion prote 35.9 49 0.0017 27.8 5.0 33 66-100 19-51 (355)
24 3qva_A Transthyretin-like prot 35.8 57 0.002 23.7 4.8 31 65-99 21-51 (116)
25 1nkg_A Rhamnogalacturonase B; 35.2 47 0.0016 29.8 5.0 42 44-101 256-297 (508)
26 2w0p_A Filamin-A; alternative 33.2 50 0.0017 22.0 3.9 32 74-105 46-77 (94)
27 2bum_A Protocatechuate 3,4-dio 32.9 56 0.0019 25.8 4.7 48 45-101 52-116 (209)
28 2xsu_A Catechol 1,2 dioxygenas 32.3 75 0.0026 26.8 5.6 47 46-101 137-194 (312)
29 1tmx_A Hydroxyquinol 1,2-dioxy 31.4 95 0.0032 25.9 6.0 47 46-101 134-190 (293)
30 1cwv_A Invasin; integrin-bindi 31.2 51 0.0017 29.1 4.6 39 65-104 38-76 (492)
31 2k9u_A Gamma filamin; cytoskel 31.0 67 0.0023 22.4 4.4 33 74-106 61-93 (119)
32 2bum_B Protocatechuate 3,4-dio 30.9 1.1E+02 0.0038 24.7 6.2 48 45-101 78-141 (241)
33 1f00_I Intimin; immunoglobulin 29.6 39 0.0013 28.0 3.3 47 46-104 21-67 (282)
34 2azq_A Catechol 1,2-dioxygenas 27.4 1.2E+02 0.0042 25.4 6.1 47 46-101 133-190 (311)
35 2ee6_A Filamin-B; beta-sandwic 27.2 56 0.0019 22.3 3.3 32 74-105 54-85 (105)
36 2di8_A Filamin-B; beta-sandwic 26.6 38 0.0013 23.6 2.4 32 74-105 54-85 (111)
37 3o5u_A Chlorocatechol 1,2-diox 26.4 1.1E+02 0.0036 25.1 5.4 47 46-101 104-162 (257)
38 2dic_A Filamin-B; beta-sandwic 26.0 37 0.0013 23.3 2.2 31 75-105 55-85 (105)
39 3kpt_A Collagen adhesion prote 25.9 40 0.0014 28.3 2.8 36 66-101 263-301 (355)
40 2d7o_A Filamin-C; beta-sandwic 25.3 41 0.0014 23.4 2.4 33 74-106 54-86 (111)
41 2dmb_A Filamin-B; beta-sandwic 24.7 57 0.0019 23.2 3.1 35 71-105 54-88 (124)
42 2eea_A Filamin-B; beta-sandwic 24.7 60 0.002 22.5 3.2 32 74-105 64-95 (115)
43 2di9_A Filamin-B; beta-sandwic 24.7 78 0.0027 22.6 3.9 32 74-105 74-105 (131)
44 2dj4_A Filamin-B; beta-sandwic 22.8 66 0.0023 22.0 3.0 34 71-104 54-87 (108)
45 1x68_A FHL5 protein; four-and- 22.7 31 0.0011 21.9 1.2 20 47-66 52-71 (76)
46 2d7n_A Filamin-C; beta-sandwic 22.7 86 0.0029 21.3 3.6 34 71-104 33-66 (93)
47 3n9t_A PNPC; phospholipid bind 22.4 1.6E+02 0.0055 24.4 5.8 48 45-101 129-187 (290)
48 2wwb_B SEC61gamma, protein tra 22.4 55 0.0019 21.6 2.4 17 22-39 44-60 (68)
49 3cnk_A Filamin-A; FLNA24, X-RA 22.3 79 0.0027 20.7 3.2 34 71-104 41-74 (89)
50 1v05_A Filamin C; actin-bindin 22.0 1.2E+02 0.004 20.0 4.2 31 74-104 51-81 (96)
51 2hbp_A Cytoskeleton assembly c 21.8 23 0.00078 23.7 0.4 37 90-129 7-43 (68)
52 2e9j_A Filamin-B; beta-sandwic 21.3 65 0.0022 22.5 2.8 34 71-104 65-98 (119)
53 3t63_A 3,4-PCD, protocatechuat 20.4 1.9E+02 0.0064 22.6 5.6 48 45-101 48-107 (200)
54 3th1_A Chlorocatechol 1,2-diox 20.2 2.2E+02 0.0076 23.2 6.1 47 46-101 100-157 (260)
55 2d7m_A Filamin-C; beta-sandwic 20.0 85 0.0029 21.6 3.2 32 73-104 57-88 (115)
No 1
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=93.01 E-value=0.35 Score=42.71 Aligned_cols=56 Identities=23% Similarity=0.230 Sum_probs=44.6
Q ss_pred cccceEEEEEEcccCCCCCCCCCceecCCCeEEEEeecCCceEEEEEEEcCCCeeEEEE
Q 031177 43 AWTGEIHGRVVCDVCGDSSIGPEDHVLEGAEVAVLCITKSGEVLNYQAFTNAKGMYTVA 101 (164)
Q Consensus 43 a~~~~V~G~VyCD~C~~~~~t~~s~~I~GA~V~V~Ck~~~~~~~~~ea~TD~~G~F~I~ 101 (164)
+....|.|.||-|.=+.|-....-.+|+|++|.|. +..+.+ ....+||++|.|...
T Consensus 303 ~G~~~igg~Vw~D~n~nG~~D~~e~gl~gv~v~L~--d~~G~~-v~tttTd~~G~Y~F~ 358 (429)
T 3irp_X 303 AGFGGFGGYVWFDKNNDGVQNDSNAAAAGITVNLL--DPTGIR-LATTTTDITGHYNFD 358 (429)
T ss_dssp SCEEEEEEEEEECTTSSSSSCCSSCBCTTCEEEEE--CTTSCE-EEEEECCTTSEEEEE
T ss_pred cceEEEccEEEEeCCCCCCcCcCCCCcCCeEEEEE--cCCCCE-EEEEEeCCCCeEEeC
Confidence 45578999999999877776677789999999996 544443 346799999999965
No 2
>3uaf_A TTR-52; beta barrel/sandwich, cell engulfment, secreted, protein BIN; 2.01A {Caenorhabditis elegans}
Probab=92.83 E-value=0.13 Score=38.01 Aligned_cols=48 Identities=10% Similarity=0.171 Sum_probs=31.9
Q ss_pred cceEEEEEEcccCCCCCCCCCceecC--CCeEEEEeecCC---ceEEEEEEEcCCCeeEEEEc
Q 031177 45 TGEIHGRVVCDVCGDSSIGPEDHVLE--GAEVAVLCITKS---GEVLNYQAFTNAKGMYTVAE 102 (164)
Q Consensus 45 ~~~V~G~VyCD~C~~~~~t~~s~~I~--GA~V~V~Ck~~~---~~~~~~ea~TD~~G~F~I~v 102 (164)
.+.|.|+..| +..|-+ +++|.|-=.+.. ...+-.++.||++|.|.|.=
T Consensus 4 sV~V~G~L~C----------~~~Pa~~~~V~V~L~d~~~~~~d~Ddll~~~~Td~~G~F~l~G 56 (117)
T 3uaf_A 4 CLMATGVLKC----------PTDPEAVKKVHIDLWDAAAAAAESDDLMGRTWSDRNGNFQVTG 56 (117)
T ss_dssp EEEEEEEEEC----------TTCGGGGSSCEEEEEEHHHHHTTSCCEEEEEECCTTSEEEEEE
T ss_pred EEEEEEEEEe----------CCccCCCCCEEEEEEecccccCCchHhheeeEECCCCEEEEEE
Confidence 4789999999 456644 556655322221 12344578999999999963
No 3
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=92.07 E-value=0.36 Score=33.72 Aligned_cols=38 Identities=16% Similarity=0.176 Sum_probs=30.9
Q ss_pred CCceecCCCeEEEEeecCCceEEE-EEEEcCCCeeEEEEc
Q 031177 64 PEDHVLEGAEVAVLCITKSGEVLN-YQAFTNAKGMYTVAE 102 (164)
Q Consensus 64 ~~s~~I~GA~V~V~Ck~~~~~~~~-~ea~TD~~G~F~I~v 102 (164)
....|++||+|.++=.|. .+.+. ..-.||++|.|.+..
T Consensus 10 ~~GkPV~gA~Vefe~yNy-ae~~~~~~~~TD~~G~~s~~~ 48 (82)
T 3e8v_A 10 AEGQPVADATVEFKVYNY-AEFYTVATKHTDRSGHASLTA 48 (82)
T ss_dssp TTSCBCTTCEEEEEEEET-TEEEEEEEEECCTTSEEEEEC
T ss_pred CCCCCCCCCEEEEEEEEc-hheeEEEEEEECCCceEEEEE
Confidence 457899999999999886 44443 456999999999987
No 4
>3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B
Probab=86.09 E-value=0.61 Score=40.01 Aligned_cols=51 Identities=20% Similarity=0.261 Sum_probs=37.9
Q ss_pred cceEEEEEEcccCCCCCCCCCceecCCCeEEEEeecCCceEEEEEEEcCCCeeEEE-EccC
Q 031177 45 TGEIHGRVVCDVCGDSSIGPEDHVLEGAEVAVLCITKSGEVLNYQAFTNAKGMYTV-AETM 104 (164)
Q Consensus 45 ~~~V~G~VyCD~C~~~~~t~~s~~I~GA~V~V~Ck~~~~~~~~~ea~TD~~G~F~I-~vp~ 104 (164)
...|.|.|.+|.=.... .....-.|++|.|.=.+. .++||++|+|+| .+|.
T Consensus 157 ~~~vsGYi~~~~~~~~~--~~~~~~~G~~V~i~gt~~-------sa~tD~~G~f~I~~vp~ 208 (321)
T 3kcp_A 157 GYKVSGYILPDFSFDAT--VAPLVKAGFKVEIVGTEL-------YAVTDANGYFEITGVPA 208 (321)
T ss_dssp SEEEEEEEEESSCCCTT--THHHHHSCCEEEETTSSC-------EEECCTTSEEEEEEECC
T ss_pred CceEEEEEccccccccc--cchhccCCcEEEEEeccc-------eeEECCCceEEEeccCC
Confidence 34899999997533322 445567899999975553 789999999999 6665
No 5
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Probab=72.04 E-value=1.6 Score=37.13 Aligned_cols=43 Identities=23% Similarity=0.156 Sum_probs=31.3
Q ss_pred ceEEEEEEcccCCCCCCCCCceecCCCeEEEEeecCCceEEEEEEEcCCCeeEEEEcc
Q 031177 46 GEIHGRVVCDVCGDSSIGPEDHVLEGAEVAVLCITKSGEVLNYQAFTNAKGMYTVAET 103 (164)
Q Consensus 46 ~~V~G~VyCD~C~~~~~t~~s~~I~GA~V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp 103 (164)
..|.|+|.= .....||+||+|.|.=. ....+||++|.|.+.||
T Consensus 301 ~~i~G~V~D--------~~~g~pi~~A~V~v~~~-------~~~~~Td~~G~y~~~l~ 343 (380)
T 1h8l_A 301 RGIWGFVLD--------ATDGRGILNATISVADI-------NHPVTTYKDGDYWRLLV 343 (380)
T ss_dssp CEEEEEEEE--------TTTCSBCTTCEEEETTE-------EEEEECCTTSEEEECCC
T ss_pred ccceEEEEe--------CCCCCccCceEEEEecC-------cceeEECCCEEEEEecC
Confidence 578999862 11246999999999521 23469999999998766
No 6
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1
Probab=71.52 E-value=1.1 Score=38.94 Aligned_cols=45 Identities=22% Similarity=0.119 Sum_probs=32.1
Q ss_pred ceEEEEEEcccCCCCCCCCCceecCCCeEEEEeecCCceEEEEEEEcCCCeeEEEEccC
Q 031177 46 GEIHGRVVCDVCGDSSIGPEDHVLEGAEVAVLCITKSGEVLNYQAFTNAKGMYTVAETM 104 (164)
Q Consensus 46 ~~V~G~VyCD~C~~~~~t~~s~~I~GA~V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp~ 104 (164)
..|.|.|. |. ...||+||+|.|.=.+.. ...+||++|.|.+.++.
T Consensus 296 ~~I~G~V~-D~--------~g~pi~gA~V~v~g~~~~-----~~~~Td~~G~y~~~l~~ 340 (426)
T 1uwy_A 296 LGVKGQVF-DQ--------NGNPLPNVIVEVQDRKHI-----CPYRTNKYGEYYLLLLP 340 (426)
T ss_dssp CSEEEEEE-CT--------TSCBCCSCEEEETTCCCS-----SCCBCCTTCEEEECCCS
T ss_pred ceeEEEEE-CC--------CCCccCceEEEEEecccc-----ceeEeCCCCEEEeccCC
Confidence 46999994 21 246999999999643321 13589999999987663
No 7
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}
Probab=67.98 E-value=2.2 Score=37.10 Aligned_cols=43 Identities=26% Similarity=0.217 Sum_probs=31.9
Q ss_pred ceEEEEEEcccCCCCCCCCCceecCCCeEEEEeecCCceEEEEEEEcCCCeeEEEEccC
Q 031177 46 GEIHGRVVCDVCGDSSIGPEDHVLEGAEVAVLCITKSGEVLNYQAFTNAKGMYTVAETM 104 (164)
Q Consensus 46 ~~V~G~VyCD~C~~~~~t~~s~~I~GA~V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp~ 104 (164)
..|.|.|. |. ...||+||+|.|+=. ....+||++|.|.+.||.
T Consensus 321 ~~i~G~V~-D~--------~g~pi~gA~V~v~~~-------~~~~~Td~~G~y~~~l~~ 363 (439)
T 2nsm_A 321 QGIKGMVL-DQ--------NYNNLANAVISVSGI-------NHDVTSGDHGDYFRLLLP 363 (439)
T ss_dssp CSEEEEEE-CT--------TSCBCTTCEEEETTE-------EEEEECCTTSEEEECCCS
T ss_pred cceEEEEE-cC--------CCCCccceEEEEEcc-------cceeEECCCCeEEEccCC
Confidence 57999996 31 236999999999521 235799999999887664
No 8
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}
Probab=61.45 E-value=6.7 Score=34.14 Aligned_cols=43 Identities=26% Similarity=0.167 Sum_probs=30.5
Q ss_pred ceEEEEEEcccCCCCCCCCCceecCCCeEEEEeecCCceEEEEEEEcCCCeeEEEEcc
Q 031177 46 GEIHGRVVCDVCGDSSIGPEDHVLEGAEVAVLCITKSGEVLNYQAFTNAKGMYTVAET 103 (164)
Q Consensus 46 ~~V~G~VyCD~C~~~~~t~~s~~I~GA~V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp 103 (164)
..|.|+|. |. . ..||+||+|.|. +..+ ...+||++|.|.+.|+
T Consensus 337 ~gv~G~V~-D~--~------G~pi~gA~V~v~--g~~~----~~~~Td~~G~y~~~l~ 379 (435)
T 3mn8_A 337 IGIKGLVT-DA--S------GFPIADANVYVA--GLEE----KPMRTSKRGEYWRLLT 379 (435)
T ss_dssp SSEEEEEE-CS--S------SCBCTTCEEEET--TCTT----SCEECCTTCEEEECCC
T ss_pred ceeEEEEE-CC--C------CCccCceEEEEe--cccc----cceEeCCCCeEEEecC
Confidence 35999996 32 2 458999999993 2101 1358999999988765
No 9
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=55.10 E-value=23 Score=26.83 Aligned_cols=35 Identities=11% Similarity=-0.094 Sum_probs=26.6
Q ss_pred CceecCCCeEEEEeecC-CceEEEEEEEcCCCeeEE
Q 031177 65 EDHVLEGAEVAVLCITK-SGEVLNYQAFTNAKGMYT 99 (164)
Q Consensus 65 ~s~~I~GA~V~V~Ck~~-~~~~~~~ea~TD~~G~F~ 99 (164)
...|-+|.+|+|.=.+. ++...-.+++||++|.-.
T Consensus 41 ~G~PA~gv~V~L~~~~~~~~~~~l~~~~Td~DGR~~ 76 (147)
T 4ank_A 41 RGSPAINVAVHVFRKAADDTWEPFASGKTSESGELH 76 (147)
T ss_dssp TTEECCSCEEEEEEECTTSCEEEEEEEECCTTSEEC
T ss_pred CCcCCCCCEEEEEEECCCCCeEEEEEEEeCCCCCCC
Confidence 45678999999987765 334555689999999865
No 10
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=54.71 E-value=36 Score=30.25 Aligned_cols=56 Identities=27% Similarity=0.288 Sum_probs=35.0
Q ss_pred cccccceEEEEEEcccCC-CCCCCCCceecC-------CCeEEEEeecC------CceEEEEEEEcCCCee
Q 031177 41 VEAWTGEIHGRVVCDVCG-DSSIGPEDHVLE-------GAEVAVLCITK------SGEVLNYQAFTNAKGM 97 (164)
Q Consensus 41 ~~a~~~~V~G~VyCD~C~-~~~~t~~s~~I~-------GA~V~V~Ck~~------~~~~~~~ea~TD~~G~ 97 (164)
.....++|.|++.||+.. ++.....|-.|+ |.+|.|.=..- -++++..+|+ |..|.
T Consensus 44 ~sq~~v~~vGRI~~Ds~~~egkLn~~Sl~LE~sr~~g~G~rV~Ldls~l~~~slFPGQIVav~G~-N~~G~ 113 (460)
T 3flo_A 44 QSQSEIYAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQVNELSFFLGQIVAFKGK-NANGD 113 (460)
T ss_dssp CCSSCEEEEEEEEESSSSCCSCCCTTSEEEECCHHHHTTCEEEEECTTCCCEEECTTCEEEEEEE-CSSSS
T ss_pred CccccEEEEEEEeeCCCCCCCCcchhheEEEeccccCCCeEEEeecccCCceeecCCCEEEEEEE-cCCCC
Confidence 344577999999999985 454455566554 67777764442 2445455665 55553
No 11
>2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown functi; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A
Probab=53.86 E-value=26 Score=25.38 Aligned_cols=35 Identities=14% Similarity=0.042 Sum_probs=26.8
Q ss_pred CceecCCCeEEEEeecCCceEEEEEEEcCCCeeEE
Q 031177 65 EDHVLEGAEVAVLCITKSGEVLNYQAFTNAKGMYT 99 (164)
Q Consensus 65 ~s~~I~GA~V~V~Ck~~~~~~~~~ea~TD~~G~F~ 99 (164)
...|-+|..|.|.=.+..+...-.+++||++|.-.
T Consensus 15 ~G~PAagv~V~L~~~~~~~~~~l~~~~Tn~DGR~~ 49 (114)
T 2g2n_A 15 TGKPAADVTVTLEKKADNGWLQLNTAKTDKDGRIK 49 (114)
T ss_dssp TTEECCSCEEEEEEECSSSEEEEEEEECCTTSEES
T ss_pred CcCCCCCCEEEEEEeCCCCcEEEEEEecCCCCccc
Confidence 45688999999987665445555689999999864
No 12
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=49.57 E-value=45 Score=26.20 Aligned_cols=38 Identities=21% Similarity=0.243 Sum_probs=27.0
Q ss_pred CCceecCCCeEEEEeecCC-------------------ceEEEEEEEcCCCeeEEEE
Q 031177 64 PEDHVLEGAEVAVLCITKS-------------------GEVLNYQAFTNAKGMYTVA 101 (164)
Q Consensus 64 ~~s~~I~GA~V~V~Ck~~~-------------------~~~~~~ea~TD~~G~F~I~ 101 (164)
....+|+||+..|.-.+.. ......+.+||++|.+.+.
T Consensus 27 ~~g~~L~Ga~F~l~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~tTd~~G~~~~~ 83 (239)
T 2pz4_A 27 KEGTPIEGVLYQLYQLKSTEDGDLLAHWNSLTITELKKQAQQVFEATTNQQGKATFN 83 (239)
T ss_dssp SSCEECSSCEEEEEEESCCCCTTHHHHHHTSCHHHHHHHEEEEEEEECCTTSEEEEE
T ss_pred CCCCCcCCcEEEEEEecCcccccccchhhhhchhhhhccCCceeEEEECCCCeEEEC
Confidence 4568999999999876532 0112345699999988865
No 13
>1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 3m1o_A* 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ...
Probab=45.04 E-value=45 Score=24.13 Aligned_cols=35 Identities=11% Similarity=-0.094 Sum_probs=26.6
Q ss_pred CceecCCCeEEEEeecC-CceEEEEEEEcCCCeeEE
Q 031177 65 EDHVLEGAEVAVLCITK-SGEVLNYQAFTNAKGMYT 99 (164)
Q Consensus 65 ~s~~I~GA~V~V~Ck~~-~~~~~~~ea~TD~~G~F~ 99 (164)
...|-+|.+|.|.=.+. .+...-.+++||++|.-.
T Consensus 12 ~G~PAagv~V~L~~~~~~~~~~~l~~~~Tn~DGR~~ 47 (115)
T 1f86_A 12 RGSPAINVAVHVFRKAADDTWEPFASGKTSESGELH 47 (115)
T ss_dssp TTEECTTCEEEEEEECTTSCEEEEEEEECCTTSEEC
T ss_pred CCCcCCCCEEEEEEcCCCCCcEEEEEeecCCCcccc
Confidence 45688999999986644 334555689999999876
No 14
>3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 3q1e_A 2h6u_A 2h1x_A
Probab=44.23 E-value=41 Score=25.22 Aligned_cols=35 Identities=11% Similarity=0.030 Sum_probs=26.3
Q ss_pred CceecCCCeEEEEeecC--CceEEEEEEEcCCCeeEE
Q 031177 65 EDHVLEGAEVAVLCITK--SGEVLNYQAFTNAKGMYT 99 (164)
Q Consensus 65 ~s~~I~GA~V~V~Ck~~--~~~~~~~ea~TD~~G~F~ 99 (164)
...|-+|..|.|.=.+. .+...-.+++||++|.-.
T Consensus 37 ~G~PAagv~V~L~~~~~~~~~w~~l~~~~Tn~DGR~~ 73 (138)
T 3iwv_A 37 QGVPGANMTIVLHRLDPVSSAWNILTTGITNDDGRCP 73 (138)
T ss_dssp TTEECTTCEEEEEEECSSSCCEEEEEEEECCTTSCCT
T ss_pred CccCCCCCEEEEEEECCCCCCcEEEEEEecCCCCCcC
Confidence 45688999999997764 344445689999999764
No 15
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=43.78 E-value=50 Score=26.82 Aligned_cols=48 Identities=17% Similarity=0.187 Sum_probs=33.6
Q ss_pred cceEEEEEEcccCCCCCCCCCceecCCCeEEE-EeecCCc-------------eEE--EEEEEcCCCeeEEEE
Q 031177 45 TGEIHGRVVCDVCGDSSIGPEDHVLEGAEVAV-LCITKSG-------------EVL--NYQAFTNAKGMYTVA 101 (164)
Q Consensus 45 ~~~V~G~VyCD~C~~~~~t~~s~~I~GA~V~V-~Ck~~~~-------------~~~--~~ea~TD~~G~F~I~ 101 (164)
.+.|.|+|+=.+ -.||+||.|.| +|...+. ..+ +....||++|.|.+.
T Consensus 77 ~i~l~G~V~D~~---------G~Pv~~A~VEiWqada~G~Y~~~~d~~~~~~~~~f~~rGr~~TD~~G~y~F~ 140 (238)
T 3t63_M 77 RIIVAGRVVDQY---------GKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFR 140 (238)
T ss_dssp EEEEEEEEEETT---------SCBCTTCEEEEEECCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEE
T ss_pred EEEEEEEEECCC---------CCCCCCCEEEEEecCCCCCCCCccccccccCCCCcCceeEEEECCCceEEEE
Confidence 479999999422 35999999999 6654310 012 345589999999875
No 16
>1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A*
Probab=42.26 E-value=48 Score=24.13 Aligned_cols=35 Identities=17% Similarity=0.055 Sum_probs=25.7
Q ss_pred CceecCCCeEEEEeecC-CceEEEEEEEcCCCeeEE
Q 031177 65 EDHVLEGAEVAVLCITK-SGEVLNYQAFTNAKGMYT 99 (164)
Q Consensus 65 ~s~~I~GA~V~V~Ck~~-~~~~~~~ea~TD~~G~F~ 99 (164)
...|-+|..|.|.=.+. .+...-.+++||++|.-.
T Consensus 13 ~G~PAagv~V~L~~~~~~~~~~~l~~~~Tn~DGR~~ 48 (119)
T 1oo2_A 13 KGTPAGSVALKVSQKTADGGWTQIATGVTDATGEIH 48 (119)
T ss_dssp TTEECTTCEEEEEEECTTSCEEEEEEEECCTTSCCT
T ss_pred CcCCCCCCEEEEEEeCCCCCcEEEEEEecCCCCccc
Confidence 45688999999986644 334555689999998754
No 17
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=40.52 E-value=51 Score=26.97 Aligned_cols=47 Identities=15% Similarity=0.116 Sum_probs=31.2
Q ss_pred ceEEEEEEcccCCCCCCCCCceecCCCeEEEE-eecCCc----------eEEEEEEEcCCCeeEEEE
Q 031177 46 GEIHGRVVCDVCGDSSIGPEDHVLEGAEVAVL-CITKSG----------EVLNYQAFTNAKGMYTVA 101 (164)
Q Consensus 46 ~~V~G~VyCD~C~~~~~t~~s~~I~GA~V~V~-Ck~~~~----------~~~~~ea~TD~~G~F~I~ 101 (164)
+.|.|+|+=.+ -.||+||.|.|= |...+. ...+....||++|.|.+.
T Consensus 103 l~l~G~V~D~~---------G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~rGr~~Td~~G~y~F~ 160 (254)
T 2boy_A 103 LIFRGEVVDQE---------GAPLADVLLDMWQADAAGEYSFINPTLPDYLFRGKIRTDENGRFTLR 160 (254)
T ss_dssp EEEEEEEECTT---------SCBCCSCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEE
T ss_pred EEEEEEEECCC---------CCCCCCCEEEEEcCCCCCccCCcCCCCCCCCCeeEEEeCCCceEEEE
Confidence 47888886422 369999999994 443211 011345689999999976
No 18
>2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyne transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A
Probab=39.78 E-value=58 Score=23.95 Aligned_cols=35 Identities=11% Similarity=-0.086 Sum_probs=26.1
Q ss_pred CceecCCCeEEEEeec-CCceEEEEEEEcCCCeeEE
Q 031177 65 EDHVLEGAEVAVLCIT-KSGEVLNYQAFTNAKGMYT 99 (164)
Q Consensus 65 ~s~~I~GA~V~V~Ck~-~~~~~~~~ea~TD~~G~F~ 99 (164)
.-.|-+|..|.|.=.+ ..+...-.+++||++|.-.
T Consensus 21 ~G~PAagv~V~L~~~~~~~~w~~l~~~~Tn~DGR~~ 56 (127)
T 2h4e_A 21 RGSPAINVAVHVFRKAADDTWEPFASGKTSESGELH 56 (127)
T ss_dssp TTEECTTCEEEEEEECTTSCEEEEEEEECCTTSEEC
T ss_pred CcCCCCCCEEEEEEeCCCCCeEEEEEeecCCCcccc
Confidence 3568899999998664 3334445689999999876
No 19
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=39.38 E-value=45 Score=22.67 Aligned_cols=34 Identities=18% Similarity=0.167 Sum_probs=23.0
Q ss_pred CCeEEEEeecCCceEEEEEEEcCCCeeEEEEccC
Q 031177 71 GAEVAVLCITKSGEVLNYQAFTNAKGMYTVAETM 104 (164)
Q Consensus 71 GA~V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp~ 104 (164)
|..|.++++|.+..++...=+-.+.|.|.|+|..
T Consensus 50 g~~~~~~v~d~~dGty~V~Y~p~~~G~y~i~V~~ 83 (100)
T 3rgh_A 50 GLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKY 83 (100)
T ss_dssp SCBCEEEEEECSSSEEEEEEECCSSEEEEEEEEE
T ss_pred CCEeEEEEEeCCCCEEEEEEEeCCCeeEEEEEEE
Confidence 5567777777755555544456677888888765
No 20
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.23 E-value=47 Score=22.49 Aligned_cols=34 Identities=15% Similarity=0.162 Sum_probs=23.7
Q ss_pred CeEEEEeecCCceEEEEEEEcCCCeeEEEEccCC
Q 031177 72 AEVAVLCITKSGEVLNYQAFTNAKGMYTVAETMP 105 (164)
Q Consensus 72 A~V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp~~ 105 (164)
..|.+++.|.+..++...=+-.+.|.|.|+|...
T Consensus 63 ~~~~~~v~D~~dGty~v~y~p~~~G~y~i~V~~~ 96 (113)
T 2ds4_A 63 SPVRTMVQDNKDGTYYISYTPKEPGVYTVWVCIK 96 (113)
T ss_dssp CCCEEEEECCSSSEEEEEEECSSSEEEEEEEEES
T ss_pred ceeEEEEEECCCCEEEEEEEeCCCeEEEEEEEEC
Confidence 6677777887555655555667778888887753
No 21
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=38.69 E-value=41 Score=22.54 Aligned_cols=32 Identities=9% Similarity=0.195 Sum_probs=22.7
Q ss_pred EEEEeecCCceEEEEEEEcCCCeeEEEEccCC
Q 031177 74 VAVLCITKSGEVLNYQAFTNAKGMYTVAETMP 105 (164)
Q Consensus 74 V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp~~ 105 (164)
+.++|.|.+..++...=+-.+.|.|.|+|...
T Consensus 49 ~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~ 80 (97)
T 2bp3_A 49 AEISCTDNQDGTCSVSYLPVLPGDYSILVKYN 80 (97)
T ss_dssp CEEEEEECSSSEEEEEEECSSCEEEEEEEEET
T ss_pred CEEEEEECCCCEEEEEEEeCCCCcEEEEEEEC
Confidence 45678887555655544667789999998863
No 22
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=38.36 E-value=40 Score=23.33 Aligned_cols=37 Identities=16% Similarity=0.188 Sum_probs=27.1
Q ss_pred CCCeEEEEeecCCceEEEEEEEcCCCeeEEEEccCCC
Q 031177 70 EGAEVAVLCITKSGEVLNYQAFTNAKGMYTVAETMPE 106 (164)
Q Consensus 70 ~GA~V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp~~~ 106 (164)
.|.+|.+++.|.+..++...=+-.+.|.|+|+|...+
T Consensus 52 ~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 88 (113)
T 2dia_A 52 SGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGG 88 (113)
T ss_dssp TTEECEEEEEECTTSEEEEEEECSSCEEEEEEEEETT
T ss_pred CCCEeeEEEEECCCCEEEEEEEeCCCccEEEEEEECC
Confidence 3677888888886666655556688899999987633
No 23
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=35.92 E-value=49 Score=27.77 Aligned_cols=33 Identities=18% Similarity=0.251 Sum_probs=24.5
Q ss_pred ceecCCCeEEEEeecCCceEEEEEEEcCCCeeEEE
Q 031177 66 DHVLEGAEVAVLCITKSGEVLNYQAFTNAKGMYTV 100 (164)
Q Consensus 66 s~~I~GA~V~V~Ck~~~~~~~~~ea~TD~~G~F~I 100 (164)
..+|+||+-.|.=.+. .......+||++|.+.+
T Consensus 19 ~~~L~GA~F~l~~~~g--~~~~~~~tTd~~G~~~~ 51 (355)
T 3kpt_A 19 EKAMAGAVFSLFKKDG--TEVKKELATDANGHIRV 51 (355)
T ss_dssp GCBCCSCEEEEEETTS--CEEEEEEECCTTSEEEE
T ss_pred CCCcCCcEEEEEECCC--CEEEEEEEECCCCeEEE
Confidence 4689999999975443 23334569999999887
No 24
>3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp}
Probab=35.80 E-value=57 Score=23.69 Aligned_cols=31 Identities=23% Similarity=0.124 Sum_probs=23.6
Q ss_pred CceecCCCeEEEEeecCCceEEEEEEEcCCCeeEE
Q 031177 65 EDHVLEGAEVAVLCITKSGEVLNYQAFTNAKGMYT 99 (164)
Q Consensus 65 ~s~~I~GA~V~V~Ck~~~~~~~~~ea~TD~~G~F~ 99 (164)
...|-+|..|.|.-.+ ..-.+++||++|.-.
T Consensus 21 ~G~PAagv~V~L~~~~----~~l~~~~Tn~DGR~~ 51 (116)
T 3qva_A 21 TGTPAEGVTVSLSREG----ETLANLVTNAQGRIA 51 (116)
T ss_dssp TTEECTTCEEEEEETT----EEEEEEECCTTSEEC
T ss_pred CCcCCCCCEEEEEEcc----EeEEEeccCCCCCcc
Confidence 3558899999998655 334678999999874
No 25
>1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A
Probab=35.19 E-value=47 Score=29.83 Aligned_cols=42 Identities=17% Similarity=0.203 Sum_probs=28.4
Q ss_pred ccceEEEEEEcccCCCCCCCCCceecCCCeEEEEeecCCceEEEEEEEcCCCeeEEEE
Q 031177 44 WTGEIHGRVVCDVCGDSSIGPEDHVLEGAEVAVLCITKSGEVLNYQAFTNAKGMYTVA 101 (164)
Q Consensus 44 ~~~~V~G~VyCD~C~~~~~t~~s~~I~GA~V~V~Ck~~~~~~~~~ea~TD~~G~F~I~ 101 (164)
....|.|+|- +. . +=..|.|.++|++. .+.++||++|.|.|.
T Consensus 256 ~RGtVsG~V~------G~-~----~~~~avv~~~~k~~-----qywt~td~~G~FtI~ 297 (508)
T 1nkg_A 256 GRGKVAGTAS------GA-D----SSMDWVVHWYNDAA-----QYWTYTSSSGSFTSP 297 (508)
T ss_dssp GCBEEEEEEE------SS-C----TTSCEEEEEECSSC-----EEEEECCTTCEEECC
T ss_pred cccEEEEEEc------Cc-c----CCceEEEEEcCCCc-----eeEEEECCCCcEEeC
Confidence 3469999997 21 1 11235566677663 567899999999985
No 26
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A
Probab=33.18 E-value=50 Score=22.03 Aligned_cols=32 Identities=9% Similarity=0.096 Sum_probs=22.3
Q ss_pred EEEEeecCCceEEEEEEEcCCCeeEEEEccCC
Q 031177 74 VAVLCITKSGEVLNYQAFTNAKGMYTVAETMP 105 (164)
Q Consensus 74 V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp~~ 105 (164)
+.++|+|.+..++...=+-.+.|.|.|+|...
T Consensus 46 ~~~~v~d~~dGty~v~Y~p~~~G~y~I~V~~~ 77 (94)
T 2w0p_A 46 AEISFEDRKDGSCGVAYVVQEPGDYEVSVKFN 77 (94)
T ss_dssp CEEEEEECTTSCEEEEEECSSCEEEEEEEEET
T ss_pred CeEEEEECCCCEEEEEEEECCCceEEEEEEEC
Confidence 45678887555555444567789999998763
No 27
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=32.85 E-value=56 Score=25.80 Aligned_cols=48 Identities=10% Similarity=0.059 Sum_probs=32.5
Q ss_pred cceEEEEEEcccCCCCCCCCCceecCCCeEEE-EeecCC-------------ceEE--EEEEEc-CCCeeEEEE
Q 031177 45 TGEIHGRVVCDVCGDSSIGPEDHVLEGAEVAV-LCITKS-------------GEVL--NYQAFT-NAKGMYTVA 101 (164)
Q Consensus 45 ~~~V~G~VyCD~C~~~~~t~~s~~I~GA~V~V-~Ck~~~-------------~~~~--~~ea~T-D~~G~F~I~ 101 (164)
.+.|.|+|.=. .-.||+||.|-| +|...+ ...+ +....| |++|.|.+.
T Consensus 52 ~l~v~G~V~D~---------~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~T~d~~G~y~F~ 116 (209)
T 2bum_A 52 RIRLEGQVFDG---------LGLPLRDVLIEIWQADTNGVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFN 116 (209)
T ss_dssp EEEEEECEECT---------TSCBCSSCEEEEECCCTTSCCSSTTCCSCSCCCTTCCCEEEEECCTTTCCEEEE
T ss_pred EEEEEEEEECC---------CCCCCCCCEEEEEecCCCCcccCccCCcccccCCCccceeEEeeeCCCcEEEEE
Confidence 36999999731 345999999999 444431 1112 334567 999999975
No 28
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=32.30 E-value=75 Score=26.78 Aligned_cols=47 Identities=28% Similarity=0.363 Sum_probs=30.1
Q ss_pred ceEEEEEEcccCCCCCCCCCceecCCCeEEEE-eecCCc--------eE--EEEEEEcCCCeeEEEE
Q 031177 46 GEIHGRVVCDVCGDSSIGPEDHVLEGAEVAVL-CITKSG--------EV--LNYQAFTNAKGMYTVA 101 (164)
Q Consensus 46 ~~V~G~VyCD~C~~~~~t~~s~~I~GA~V~V~-Ck~~~~--------~~--~~~ea~TD~~G~F~I~ 101 (164)
+.|.|+|+=. .-.||+||.|.|= |...+. .- .+....||++|.|.+.
T Consensus 137 l~v~G~V~D~---------~G~Pv~gA~VeiWqada~G~Y~~~~~~~~~~~~rGr~~TD~~G~y~F~ 194 (312)
T 2xsu_A 137 LIIEGTVTDT---------EGNIIEGAKVEVWHANSLGNYSFFDKSQSDFNLRRTILTDVNGKYVAL 194 (312)
T ss_dssp EEEEEEEEET---------TSCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEE
T ss_pred EEEEEEEECC---------CCCCCCCCEEEEEecCCCCcccCCCCCCCCCCCeeEEEeCCCceEEEE
Confidence 4677777632 2459999999995 433211 11 2345689999999965
No 29
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=31.41 E-value=95 Score=25.92 Aligned_cols=47 Identities=15% Similarity=0.210 Sum_probs=31.5
Q ss_pred ceEEEEEEcccCCCCCCCCCceecCCCeEEEEeecCCc----------eEEEEEEEcCCCeeEEEE
Q 031177 46 GEIHGRVVCDVCGDSSIGPEDHVLEGAEVAVLCITKSG----------EVLNYQAFTNAKGMYTVA 101 (164)
Q Consensus 46 ~~V~G~VyCD~C~~~~~t~~s~~I~GA~V~V~Ck~~~~----------~~~~~ea~TD~~G~F~I~ 101 (164)
+.|.|+|+=. .-.||+||.|-|==-|..+ ...+....||++|.|.+.
T Consensus 134 l~v~G~V~D~---------~G~Pv~~A~VEiWqada~G~Y~~~~~~~~~~~rGr~~TD~~G~y~F~ 190 (293)
T 1tmx_A 134 CWVEGTVTDT---------DGNPVPDARIEVWEADDDGFYDVQYDDDRTAARAHLLSGPDGGYAFW 190 (293)
T ss_dssp EEEEEEEEET---------TSCBCTTCEEEEECCCTTSCCGGGSSSCCCCSEEEEECCTTSEEEEE
T ss_pred EEEEEEEECC---------CCCCCCCceeEEEecCCCCcccCCccCCCCCceeEEEeCCCceEEEE
Confidence 4888888742 2368999999984333311 113445689999999875
No 30
>1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3
Probab=31.21 E-value=51 Score=29.05 Aligned_cols=39 Identities=26% Similarity=0.210 Sum_probs=29.0
Q ss_pred CceecCCCeEEEEeecCCceEEEEEEEcCCCeeEEEEccC
Q 031177 65 EDHVLEGAEVAVLCITKSGEVLNYQAFTNAKGMYTVAETM 104 (164)
Q Consensus 65 ~s~~I~GA~V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp~ 104 (164)
...|++|.+|.+.-.++ ...-....+||++|.+.+.+.+
T Consensus 38 ~Gnpv~g~~Vtf~~~~g-~~~~~~t~~Td~~G~a~~tlts 76 (492)
T 1cwv_A 38 EGKPLAGQEVVITTNNG-ALPNKITEKTDANGVARIALTN 76 (492)
T ss_dssp TSCBCCSCEEEEECCTT-CBSCEEEEECCTTSEEEEEEBC
T ss_pred CCCCCCCCEEEEEECCC-ccccccceeeCCCceEEEEEEc
Confidence 46799999999985443 2111346799999999999865
No 31
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=30.99 E-value=67 Score=22.42 Aligned_cols=33 Identities=9% Similarity=0.125 Sum_probs=23.8
Q ss_pred EEEEeecCCceEEEEEEEcCCCeeEEEEccCCC
Q 031177 74 VAVLCITKSGEVLNYQAFTNAKGMYTVAETMPE 106 (164)
Q Consensus 74 V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp~~~ 106 (164)
+.++|.|.+..++...=+-.+.|.|.|+|....
T Consensus 61 ~~~~v~d~~dGty~v~Y~p~~~G~y~I~V~~~g 93 (119)
T 2k9u_A 61 AEIAFEDRKDGSCGVSYVVQEPGDYEVSIKFND 93 (119)
T ss_dssp CEEEEECCSSSEEEEEEECCSSEEEEEEEEETS
T ss_pred CeEEEEECCCCEEEEEEEECCCceEEEEEEECC
Confidence 567788886666555446677899999998643
No 32
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=30.93 E-value=1.1e+02 Score=24.67 Aligned_cols=48 Identities=19% Similarity=0.196 Sum_probs=33.0
Q ss_pred cceEEEEEEcccCCCCCCCCCceecCCCeEEEE-eecCCc-------------eEE--EEEEEcCCCeeEEEE
Q 031177 45 TGEIHGRVVCDVCGDSSIGPEDHVLEGAEVAVL-CITKSG-------------EVL--NYQAFTNAKGMYTVA 101 (164)
Q Consensus 45 ~~~V~G~VyCD~C~~~~~t~~s~~I~GA~V~V~-Ck~~~~-------------~~~--~~ea~TD~~G~F~I~ 101 (164)
.+.|.|+|+=.+ -.||+||.|.|= |...+. ..+ +....||++|.|.+.
T Consensus 78 ~i~v~G~V~D~~---------G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~TD~~G~y~F~ 141 (241)
T 2bum_B 78 RVIVHGYVRDQF---------GRPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFR 141 (241)
T ss_dssp EEEEEEEEEETT---------SCBCCSCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEE
T ss_pred EEEEEEEEECCC---------CCCCCCcEEEEEecCCCceeCCCCCCcccccCCCccceeEEEeCCCceEEEE
Confidence 468999999533 359999999994 433211 112 345689999999875
No 33
>1f00_I Intimin; immunoglobulin-like fold, C-type lectin-like fold, cell adhesion; 1.90A {Escherichia coli} SCOP: b.1.14.1 b.1.14.1 d.169.1.3 PDB: 1f02_I 1e5u_I
Probab=29.64 E-value=39 Score=28.04 Aligned_cols=47 Identities=19% Similarity=0.145 Sum_probs=33.9
Q ss_pred ceEEEEEEcccCCCCCCCCCceecCCCeEEEEeecCCceEEEEEEEcCCCeeEEEEccC
Q 031177 46 GEIHGRVVCDVCGDSSIGPEDHVLEGAEVAVLCITKSGEVLNYQAFTNAKGMYTVAETM 104 (164)
Q Consensus 46 ~~V~G~VyCD~C~~~~~t~~s~~I~GA~V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp~ 104 (164)
..++=+|. | . ..||+|.+|...=.++ ......++||++|...|.|.+
T Consensus 21 ~t~tatV~-D---~------gnpv~g~~V~fs~~~G--~l~~~~~~Td~~G~atvtlts 67 (282)
T 1f00_I 21 ITYTVKVM-K---G------DKPVSNQEVTFTTTLG--KLSNSTEKTDTNGYAKVTLTS 67 (282)
T ss_dssp EEEEEEEE-E---T------TEECTTCEEEEEESSS--EESCSEEECCTTSEEEEEEEC
T ss_pred EEEEEEEE-E---C------CcccCCcEEEEEcCCC--ccccceeEECCCcEEEEEEEc
Confidence 45666666 4 2 3689999998876553 222235799999999999987
No 34
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=27.42 E-value=1.2e+02 Score=25.39 Aligned_cols=47 Identities=26% Similarity=0.354 Sum_probs=31.2
Q ss_pred ceEEEEEEcccCCCCCCCCCceecCCCeEEEEeecCCc---------eE--EEEEEEcCCCeeEEEE
Q 031177 46 GEIHGRVVCDVCGDSSIGPEDHVLEGAEVAVLCITKSG---------EV--LNYQAFTNAKGMYTVA 101 (164)
Q Consensus 46 ~~V~G~VyCD~C~~~~~t~~s~~I~GA~V~V~Ck~~~~---------~~--~~~ea~TD~~G~F~I~ 101 (164)
+.|.|+|+=- ...||+||.|-|==-|..+ .- .+....||++|.|.+.
T Consensus 133 l~v~G~V~D~---------~G~Pv~gA~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~G~y~F~ 190 (311)
T 2azq_A 133 MFLQGQVFDA---------NGKPLAGATVDLWHANTQGTYSYFDSTQSEFNLRRRIITDAEGRYRAR 190 (311)
T ss_dssp EEEEEEEECS---------SSCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTCEEEEE
T ss_pred EEEEEEEEcC---------CCCCCCCceeEEEecCCCCccCCCCCCCCCCCCeeEEEeCCCceEEEE
Confidence 4888888731 2479999999994333211 01 2345689999999875
No 35
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.16 E-value=56 Score=22.30 Aligned_cols=32 Identities=9% Similarity=0.094 Sum_probs=20.9
Q ss_pred EEEEeecCCceEEEEEEEcCCCeeEEEEccCC
Q 031177 74 VAVLCITKSGEVLNYQAFTNAKGMYTVAETMP 105 (164)
Q Consensus 74 V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp~~ 105 (164)
+.++|.|.+..++...=+-.+.|.|.|+|...
T Consensus 54 ~~v~v~d~~dGty~v~Y~p~~~G~y~I~V~~~ 85 (105)
T 2ee6_A 54 AEITFDDHKNGSCGVSYIAQEPGNYEVSIKFN 85 (105)
T ss_dssp EEEEECCCCSSCCCEEEEESSCEEEEEEEEET
T ss_pred CEEEEEECCCCEEEEEEEECCCceEEEEEEEC
Confidence 45688887544443333445679999988763
No 36
>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=26.60 E-value=38 Score=23.61 Aligned_cols=32 Identities=16% Similarity=0.251 Sum_probs=22.9
Q ss_pred EEEEeecCCceEEEEEEEcCCCeeEEEEccCC
Q 031177 74 VAVLCITKSGEVLNYQAFTNAKGMYTVAETMP 105 (164)
Q Consensus 74 V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp~~ 105 (164)
+.++|.|.+..++...=+-.+.|.|.|+|...
T Consensus 54 ~~~~v~d~~dGty~v~Y~p~~~G~y~I~V~~~ 85 (111)
T 2di8_A 54 VDIQTEDLEDGTCKVSYFPTVPGVYIVSTKFA 85 (111)
T ss_dssp CCEECCBCTTSCEEEEECCCSCSEEEEEEEES
T ss_pred ceEEEEECCCCEEEEEEEeCCCeEEEEEEEEC
Confidence 55788888555555544667789999998863
No 37
>3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A*
Probab=26.41 E-value=1.1e+02 Score=25.14 Aligned_cols=47 Identities=15% Similarity=0.123 Sum_probs=31.4
Q ss_pred ceEEEEEEcccCCCCCCCCCceecCCCeEEE-EeecCC--------ce---EEEEEEEcCCCeeEEEE
Q 031177 46 GEIHGRVVCDVCGDSSIGPEDHVLEGAEVAV-LCITKS--------GE---VLNYQAFTNAKGMYTVA 101 (164)
Q Consensus 46 ~~V~G~VyCD~C~~~~~t~~s~~I~GA~V~V-~Ck~~~--------~~---~~~~ea~TD~~G~F~I~ 101 (164)
+.|.|+|+=-+ -.||+||.|.| +|...+ .. ..+....||++|.|.+.
T Consensus 104 l~l~G~V~D~~---------G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~RGr~~TD~~G~y~F~ 162 (257)
T 3o5u_A 104 MRFTGSVRDTS---------GTPITGAVIDVWHSTNDGNYSFFSPALPDQYLLRGRVVPAEDGSIEFH 162 (257)
T ss_dssp EEEEEEEECTT---------CCBCTTCEEEEECCCTTSCCTTSCTTSCSSCTTEEEECCCTTSEEEEE
T ss_pred EEEEEEEECCC---------CCCCCCcEEEEEecCCCCCCCCcCCCCCcccCceeEEEeCCCceEEEE
Confidence 48888888322 35999999999 454321 01 12445689999999875
No 38
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=26.00 E-value=37 Score=23.31 Aligned_cols=31 Identities=19% Similarity=0.185 Sum_probs=21.0
Q ss_pred EEEeecCCceEEEEEEEcCCCeeEEEEccCC
Q 031177 75 AVLCITKSGEVLNYQAFTNAKGMYTVAETMP 105 (164)
Q Consensus 75 ~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp~~ 105 (164)
.++|+|.+...+...=+-.+.|.|.|+|...
T Consensus 55 ~~~v~d~~dGty~v~Y~p~~~G~y~I~V~~~ 85 (105)
T 2dic_A 55 KINCRDNKDGSCSAEYIPFAPGDYDVNITYG 85 (105)
T ss_dssp CCEEEECSSSCEEEEECCSSCEEEEEEEEET
T ss_pred eEEEEECCCCeEEEEEEeCCCeEEEEEEEEC
Confidence 4567777544554444567789999998763
No 39
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=25.87 E-value=40 Score=28.33 Aligned_cols=36 Identities=14% Similarity=0.185 Sum_probs=25.4
Q ss_pred ceecCCCeEEEEeecCCceEE---EEEEEcCCCeeEEEE
Q 031177 66 DHVLEGAEVAVLCITKSGEVL---NYQAFTNAKGMYTVA 101 (164)
Q Consensus 66 s~~I~GA~V~V~Ck~~~~~~~---~~ea~TD~~G~F~I~ 101 (164)
..+|+||+-.|...+++-... ..+.+||++|.|.+.
T Consensus 263 ~~~L~GA~F~l~~~~g~~~~~~~~~~~~~td~~G~~~~~ 301 (355)
T 3kpt_A 263 KNKMKGAEFVLKDNNGKIVVVAGKEVTGVSDENGVIKWS 301 (355)
T ss_dssp CCBCSCCEEEEEETTSCBCBSSSSBCEEECCTTSEEEEE
T ss_pred CcccCCCEEEEEeCCCCEEEeccceEEEEECCCCeEEEC
Confidence 348999999999665421111 125789999999885
No 40
>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=25.32 E-value=41 Score=23.36 Aligned_cols=33 Identities=12% Similarity=0.289 Sum_probs=23.8
Q ss_pred EEEEeecCCceEEEEEEEcCCCeeEEEEccCCC
Q 031177 74 VAVLCITKSGEVLNYQAFTNAKGMYTVAETMPE 106 (164)
Q Consensus 74 V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp~~~ 106 (164)
+.++|.|.+..++...=+-.+.|.|.|+|....
T Consensus 54 ~~~~v~d~~dGty~V~Y~p~~~G~y~I~V~~~g 86 (111)
T 2d7o_A 54 AEITCKDNKDGTCTVSYLPTAPGDYSIIVRFDD 86 (111)
T ss_dssp CCBCCCCCSSSEEEEEECCSSCEEEEEECBBSS
T ss_pred ceEEEEECCCCEEEEEEEeCCCeEEEEEEEECC
Confidence 455788886666655556677899999998743
No 41
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=24.66 E-value=57 Score=23.22 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=23.1
Q ss_pred CCeEEEEeecCCceEEEEEEEcCCCeeEEEEccCC
Q 031177 71 GAEVAVLCITKSGEVLNYQAFTNAKGMYTVAETMP 105 (164)
Q Consensus 71 GA~V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp~~ 105 (164)
|..|.++..|.+..++...=+-.+.|.|+|+|...
T Consensus 54 g~~v~~~v~d~~dGty~V~Y~p~~~G~y~I~V~~~ 88 (124)
T 2dmb_A 54 GTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFG 88 (124)
T ss_dssp SCBCCCEEEECTTSCEEEEEECSSCEEEEEEEEES
T ss_pred CCEEeeEEEeCCCCEEEEEEEcCCCEEEEEEEEEC
Confidence 44555666676444555544667789999998763
No 42
>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.66 E-value=60 Score=22.51 Aligned_cols=32 Identities=13% Similarity=0.264 Sum_probs=22.0
Q ss_pred EEEEeecCCceEEEEEEEcCCCeeEEEEccCC
Q 031177 74 VAVLCITKSGEVLNYQAFTNAKGMYTVAETMP 105 (164)
Q Consensus 74 V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp~~ 105 (164)
+.++|.|.+..++...=+-.+.|.|.|+|...
T Consensus 64 ~~~~v~d~~dGty~v~Y~p~~~G~y~I~V~~~ 95 (115)
T 2eea_A 64 AEISCIDNKDGTCTVTYLPTLPGDYSILVKYN 95 (115)
T ss_dssp CEECCBCCSSSEEEEEEECSSCSCEEEEEEES
T ss_pred ceEEEEECCCCEEEEEEEeCCCeeEEEEEEEC
Confidence 45678887555655544667779999888763
No 43
>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=24.65 E-value=78 Score=22.56 Aligned_cols=32 Identities=13% Similarity=0.195 Sum_probs=23.0
Q ss_pred EEEEeecCCceEEEEEEEcCCCeeEEEEccCC
Q 031177 74 VAVLCITKSGEVLNYQAFTNAKGMYTVAETMP 105 (164)
Q Consensus 74 V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp~~ 105 (164)
+.++|+|.+..++...=+-.+.|.|.|+|...
T Consensus 74 ~~~~v~d~~dGty~v~Y~p~~~G~y~I~V~~~ 105 (131)
T 2di9_A 74 AKIECSDNGDGTCSVSYLPTKPGEYFVNILFE 105 (131)
T ss_dssp CEEEEEECSSSEEEEEEECSSSSEEEEEEEES
T ss_pred ceEEEEECCCCEEEEEEEeCCCeeEEEEEEEC
Confidence 45678887555665554667889999998863
No 44
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=22.84 E-value=66 Score=22.02 Aligned_cols=34 Identities=15% Similarity=0.148 Sum_probs=21.1
Q ss_pred CCeEEEEeecCCceEEEEEEEcCCCeeEEEEccC
Q 031177 71 GAEVAVLCITKSGEVLNYQAFTNAKGMYTVAETM 104 (164)
Q Consensus 71 GA~V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp~ 104 (164)
|..+.+++.|.+..++...=+-.+.|.|+|+|..
T Consensus 54 g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~ 87 (108)
T 2dj4_A 54 GLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKY 87 (108)
T ss_dssp SCEECCCCEECSSSEEEEEECCSSCEEEEEEEEE
T ss_pred CCEeeeEEEECCCCEEEEEEEeCCCeeEEEEEEE
Confidence 4455566666644455444455677888888775
No 45
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.74 E-value=31 Score=21.86 Aligned_cols=20 Identities=15% Similarity=0.371 Sum_probs=14.9
Q ss_pred eEEEEEEcccCCCCCCCCCc
Q 031177 47 EIHGRVVCDVCGDSSIGPED 66 (164)
Q Consensus 47 ~V~G~VyCD~C~~~~~t~~s 66 (164)
...|.+||..|....+.+.-
T Consensus 52 ~~~g~~yC~~cy~~~f~~~C 71 (76)
T 1x68_A 52 TQNKEIFCQKCGSGMDTDIS 71 (76)
T ss_dssp EETTEEEETTTTCCCCCCSS
T ss_pred eECCEEECHHHhhhhhCCcC
Confidence 56789999999887665433
No 46
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=22.69 E-value=86 Score=21.31 Aligned_cols=34 Identities=9% Similarity=0.089 Sum_probs=17.1
Q ss_pred CCeEEEEeecCCceEEEEEEEcCCCeeEEEEccC
Q 031177 71 GAEVAVLCITKSGEVLNYQAFTNAKGMYTVAETM 104 (164)
Q Consensus 71 GA~V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp~ 104 (164)
|..+..+.+|....++...-+-.+.|.|.|.+..
T Consensus 33 G~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~ 66 (93)
T 2d7n_A 33 GKTARPNITDNKDGTITVRYAPTEKGLHQMGIKY 66 (93)
T ss_dssp SCEECCEEEECSSSCEEEEECCSSCEEEEEEEEE
T ss_pred CCccceEEEECCCCEEEEEEEccCCEEEEEEEEE
Confidence 3444444444433344444455666666666554
No 47
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=22.44 E-value=1.6e+02 Score=24.44 Aligned_cols=48 Identities=17% Similarity=0.176 Sum_probs=32.3
Q ss_pred cceEEEEEEcccCCCCCCCCCceecCCCeEEE-EeecCCc--------e--EEEEEEEcCCCeeEEEE
Q 031177 45 TGEIHGRVVCDVCGDSSIGPEDHVLEGAEVAV-LCITKSG--------E--VLNYQAFTNAKGMYTVA 101 (164)
Q Consensus 45 ~~~V~G~VyCD~C~~~~~t~~s~~I~GA~V~V-~Ck~~~~--------~--~~~~ea~TD~~G~F~I~ 101 (164)
.+.|.|+|+=.+ -.||+||.|-| +|...+. . ..+....||++|.|.+.
T Consensus 129 ~l~l~G~V~D~~---------G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~lRGr~~TD~~G~y~F~ 187 (290)
T 3n9t_A 129 PALVYGRVLDVQ---------GRPVVGAVLDVWQTADNGMYSGQDPDQPFGNLRGRYRSDNDGCFAIQ 187 (290)
T ss_dssp EEEEEEEEEETT---------SCBCSSCEEEEECCCTTSCCTTTSTTSCTTTTEEEEECCTTSEEEEE
T ss_pred eEEEEEEEECCC---------CCCCCCCEEEEEccCCCCCcCCCCCCCCCCCceeEEEeCCCceEEEE
Confidence 358888888432 36999999999 4443211 0 12445699999999875
No 48
>2wwb_B SEC61gamma, protein transport protein SEC61 subunit gamma; ribosome, protein EXIT tunnel, cotranslational protein translocation, protein conducting channel; 6.48A {Canis lupus familiaris}
Probab=22.39 E-value=55 Score=21.63 Aligned_cols=17 Identities=35% Similarity=0.809 Sum_probs=13.3
Q ss_pred hHHHHHHHHHHHHhhhcc
Q 031177 22 KLVMGFFGFLLTIISFAS 39 (164)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~ 39 (164)
.++|+++||++.++ +.+
T Consensus 44 ~~i~G~IGf~IklI-~ip 60 (68)
T 2wwb_B 44 FAIMGFIGFFVKLI-HIP 60 (68)
T ss_dssp HHHHHHHHHHHHHH-HGG
T ss_pred HHHHHHHHHHHHHH-HHH
Confidence 35899999999988 443
No 49
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=22.32 E-value=79 Score=20.67 Aligned_cols=34 Identities=15% Similarity=0.164 Sum_probs=20.2
Q ss_pred CCeEEEEeecCCceEEEEEEEcCCCeeEEEEccC
Q 031177 71 GAEVAVLCITKSGEVLNYQAFTNAKGMYTVAETM 104 (164)
Q Consensus 71 GA~V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp~ 104 (164)
|..+.++.+|.+..++...=+-.+.|.|.|+|..
T Consensus 41 g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~ 74 (89)
T 3cnk_A 41 TPCEEILVKHVGSRLYSVSYLLKDKGEYTLVVKW 74 (89)
T ss_dssp SCCSEEEEEEEETTEEEEEEECCSCEEEEEEEEE
T ss_pred CCceeEEEEECCCCEEEEEEEECCCccEEEEEEE
Confidence 3334555566544444444456678888888765
No 50
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Probab=22.04 E-value=1.2e+02 Score=20.05 Aligned_cols=31 Identities=19% Similarity=0.148 Sum_probs=19.6
Q ss_pred EEEEeecCCceEEEEEEEcCCCeeEEEEccC
Q 031177 74 VAVLCITKSGEVLNYQAFTNAKGMYTVAETM 104 (164)
Q Consensus 74 V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp~ 104 (164)
+.++.+|.+..++...=+-.+.|.|.|+|..
T Consensus 51 ~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~ 81 (96)
T 1v05_A 51 EEVYVKHMGNRVYNVTYTVKEKGDYILIVKW 81 (96)
T ss_dssp SEEEEEECSTTEEEEEEECSSCEEEEEEEEE
T ss_pred eEEEEEeCCCCEEEEEEEeCCCEEEEEEEEE
Confidence 3555666644455444456677888888875
No 51
>2hbp_A Cytoskeleton assembly control protein SLA1; SHD1, NPFX(1,2)D, endocytosis, protein binding; NMR {Saccharomyces cerevisiae}
Probab=21.83 E-value=23 Score=23.71 Aligned_cols=37 Identities=5% Similarity=-0.008 Sum_probs=21.7
Q ss_pred EEcCCCeeEEEEccCCCCCCcCceEEEEeeCCCCCCCCCC
Q 031177 90 AFTNAKGMYTVAETMPESDRWDACLARPISSFHDHCSHLG 129 (164)
Q Consensus 90 a~TD~~G~F~I~vp~~~~d~~~~C~V~LvsSp~~~Cn~~~ 129 (164)
-.||.+|.|+|+-..-... .=.+.|++..-..+.+|.
T Consensus 7 tWtDrtG~F~VeA~flg~~---dgki~LhK~nGv~I~VP~ 43 (68)
T 2hbp_A 7 LWVDRSGTFKVDAEFIGCA---KGKIHLHKANGVKIAVAA 43 (68)
T ss_dssp EEEBSSSCCEEEEEEEEEE---TTEEEEECTTSCEEEEET
T ss_pred EEEcCCCCeEEEEEEEEEe---CCEEEEEecCCcEEEeEh
Confidence 4799999999987662211 123666664333454443
No 52
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.33 E-value=65 Score=22.47 Aligned_cols=34 Identities=12% Similarity=0.196 Sum_probs=21.0
Q ss_pred CCeEEEEeecCCceEEEEEEEcCCCeeEEEEccC
Q 031177 71 GAEVAVLCITKSGEVLNYQAFTNAKGMYTVAETM 104 (164)
Q Consensus 71 GA~V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp~ 104 (164)
|..+.++..|.+..++...=+-++.|.|+|+|..
T Consensus 65 g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~ 98 (119)
T 2e9j_A 65 GKPKRAIVHDNKDGTYAVTYIPDKTGRYMIGVTY 98 (119)
T ss_dssp CCCCCEEEEECCSSEEEEEECCCSCSEEEECCEE
T ss_pred CCEEEEEEEECCCCEEEEEEEeCCCEEEEEEEEE
Confidence 4445556666544455544456778888887765
No 53
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=20.44 E-value=1.9e+02 Score=22.61 Aligned_cols=48 Identities=15% Similarity=0.121 Sum_probs=32.9
Q ss_pred cceEEEEEEcccCCCCCCCCCceecCCCeEEEE-eecCCc--------eEE--EEEEEcCCC-eeEEEE
Q 031177 45 TGEIHGRVVCDVCGDSSIGPEDHVLEGAEVAVL-CITKSG--------EVL--NYQAFTNAK-GMYTVA 101 (164)
Q Consensus 45 ~~~V~G~VyCD~C~~~~~t~~s~~I~GA~V~V~-Ck~~~~--------~~~--~~ea~TD~~-G~F~I~ 101 (164)
.+.|.|+|+=.. -.||+||.|.|= |...+. ..+ +....||++ |.|.+.
T Consensus 48 ~l~v~G~V~D~~---------G~Pv~~A~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~~G~~~F~ 107 (200)
T 3t63_A 48 HILLLGQVYDGN---------GHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLH 107 (200)
T ss_dssp EEEEEECEECTT---------SCBCSSCEEEEEECCTTSCCCCBCCTTSSBCSEEEEECCSSCCSEEEE
T ss_pred EEEEEEEEECCC---------CCCCCCCEEEEEccCCCCCcCCCCCCCCCccccceEecCCCCCEEEEE
Confidence 479999998422 469999999994 443311 112 345589998 999875
No 54
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=20.16 E-value=2.2e+02 Score=23.21 Aligned_cols=47 Identities=23% Similarity=0.241 Sum_probs=31.8
Q ss_pred ceEEEEEEcccCCCCCCCCCceecCCCeEEE-EeecCC--------ce--EEEEEEEcCCCeeEEEE
Q 031177 46 GEIHGRVVCDVCGDSSIGPEDHVLEGAEVAV-LCITKS--------GE--VLNYQAFTNAKGMYTVA 101 (164)
Q Consensus 46 ~~V~G~VyCD~C~~~~~t~~s~~I~GA~V~V-~Ck~~~--------~~--~~~~ea~TD~~G~F~I~ 101 (164)
+.|.|+|+ |. ...||+||.|-| +|...+ .. -.+....||++|.|...
T Consensus 100 l~v~G~V~-D~--------~G~Pv~gA~VeiWqad~~G~Y~~~~~~~~~~~~RG~~~TD~~G~y~F~ 157 (260)
T 3th1_A 100 LIIRGTVR-SD--------TGELLAGAVIDVWHSTPDGLYSGIHDNIPVDYYRGKLVTDSQGNYRVR 157 (260)
T ss_dssp EEEEEEEE-ET--------TSCBCSSCEEEEEECCTTSCCTTTSTTCCTTBTEEEEECCTTSEEEEE
T ss_pred EEEEEEEE-CC--------CCCCcCCcEEEEEecCCCCcccCcCCCCCCCCCceEEEeCCCCEEEEE
Confidence 48999998 31 235999999998 454431 01 12445689999999754
No 55
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=20.00 E-value=85 Score=21.63 Aligned_cols=32 Identities=9% Similarity=0.093 Sum_probs=18.7
Q ss_pred eEEEEeecCCceEEEEEEEcCCCeeEEEEccC
Q 031177 73 EVAVLCITKSGEVLNYQAFTNAKGMYTVAETM 104 (164)
Q Consensus 73 ~V~V~Ck~~~~~~~~~ea~TD~~G~F~I~vp~ 104 (164)
.+.++.+|.+..++...=+-.+.|.|+|+|..
T Consensus 57 ~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~ 88 (115)
T 2d7m_A 57 PKKANIRDNGDGTYTVSYLPDMSGRYTITIKY 88 (115)
T ss_dssp BCCEEEEECSSSCEEEEECCCSCEEEEEEEEE
T ss_pred eeeeEEEECCCCEEEEEEEeCCCceEEEEEEE
Confidence 34445555544444444466677888887765
Done!