BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031181
(164 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O04616|Y4115_ARATH Uncharacterized protein At4g01150, chloroplastic OS=Arabidopsis
thaliana GN=At4g01150 PE=1 SV=1
Length = 164
Score = 210 bits (535), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/167 (65%), Positives = 134/167 (80%), Gaps = 10/167 (5%)
Query: 1 MAATAYAAVLTPRVPSTTTVKVKSSHCFALPCLPPRS-STPPFSSSIKQVSES--RRFPL 57
+AA++ AV+ PRVP+ +T C A+P LPPRS F+ +K VS + ++ L
Sbjct: 5 VAASSSMAVMVPRVPAVST------RCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVEL 58
Query: 58 LQVRASSSEETSTVDADELFSDLKEKWDAVENKSTVLLYGGGAIVAVWLSSTIVGAINSV 117
L+ RASS EETS++D +EL +DLKEKWD +ENKSTVL+YGGGAIVAVWLSS +VGAINSV
Sbjct: 59 LKTRASS-EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSV 117
Query: 118 PLLPKLLELIGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 164
PLLPK++EL+GLGYTGWFVYRYLLFKSSRKELA DIE+LKKKIAG+E
Sbjct: 118 PLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164
>sp|Q8LCA1|TMP14_ARATH Thylakoid membrane phosphoprotein 14 kDa, chloroplastic
OS=Arabidopsis thaliana GN=TMP14 PE=1 SV=2
Length = 174
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 55/83 (66%)
Query: 81 KEKWDAVENKSTVLLYGGGAIVAVWLSSTIVGAINSVPLLPKLLELIGLGYTGWFVYRYL 140
+E W+ V++K + +VA+W S+ ++ AI+ +PL+P +LEL+G+GYTGWF Y+ L
Sbjct: 91 QEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNL 150
Query: 141 LFKSSRKELATDIEALKKKIAGT 163
+FK R+ L +++ K I G+
Sbjct: 151 VFKPDREALFEKVKSTYKDILGS 173
>sp|Q119Z5|SYE_TRIEI Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101)
GN=gltX PE=3 SV=1
Length = 881
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Query: 95 LYGGGAIVAVWLS--STIVGAINSVPLLPKLLELIGLGYTGWFVYRYLLFKSSRKELATD 152
L+G A+V + + + ++ A++ +P+L + ELIG+ Y WFVYRYLL +S+R+EL
Sbjct: 809 LFGWLALVILTFTFMAVVIEALDGIPILSIIFELIGVIYLVWFVYRYLLKRSNRQELLDK 868
Query: 153 IEALKKKIAG 162
IE +K++I G
Sbjct: 869 IENIKREIFG 878
>sp|Q8YX97|SYV_NOSS1 Valine--tRNA ligase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=valS PE=3 SV=1
Length = 1014
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 44 SSIKQVSESRRFPLLQ----VRASSSEETSTVDADELFSDLKEKWDAVENKSTVLLYGGG 99
++++ SES R L+ ++ + ET T+ A + S + +K K+ L+ G
Sbjct: 796 ANLQTDSESERQILMAGQSYIKDLAKVETLTIAAGQQPSTVTKKKPQKGLKTIGLVIAGL 855
Query: 100 AIVAVWLSSTIVGAINSVPLLPKLLELIGLGYTGWFVYRYLLFKSSRKELATDIEA--LK 157
+ V L+ + +++VP L E++GLGY+ WFV R LL +RK A +
Sbjct: 856 VFLRVALA--VADTVDNVPFLGTFFEIVGLGYSAWFVTRNLLSTPARKRFLAKFFAPPTE 913
Query: 158 KKIAGT 163
K ++GT
Sbjct: 914 KNLSGT 919
>sp|B4EW02|RNB_PROMH Exoribonuclease 2 OS=Proteus mirabilis (strain HI4320) GN=rnb PE=3
SV=1
Length = 647
Score = 33.9 bits (76), Expect = 0.44, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 29 ALPCLPPRSSTPPFSSSIKQVSESRRFPLLQVRASSSEETSTV-DADELFS 78
A+PC P +S T PF+ V+E RR PL + +E T + D D+ F+
Sbjct: 111 AIPCRPIKSLTHPFADQDWAVAEMRRHPLKGDKHFQAELTDFITDKDDHFA 161
>sp|A0RYF4|TFE_CENSY Transcription factor E OS=Cenarchaeum symbiosum (strain A) GN=tfe
PE=3 SV=1
Length = 171
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
Query: 133 GWFVYRYLLFKSSRKELATDIEALKKKIAG 162
GWFVYR+ +S R+E+ + IE KKKI G
Sbjct: 74 GWFVYRW---RSRREEVESFIENQKKKIMG 100
>sp|Q74JY4|MURG_LACJO UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Lactobacillus johnsonii (strain CNCM
I-12250 / La1 / NCC 533) GN=murG PE=3 SV=1
Length = 370
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 42 FSSSIKQVSESRRFPLLQVRASSSEETSTVDADELFSDLKEKWDAVENKSTVLLYGG 98
F + KQ SE ++ L++ S++ ++ + + D+ +KWD N TVL++GG
Sbjct: 147 FDDAAKQFSEKKK--LVKTGNPRSQQVLGLNKENI--DIAKKWDLNPNMPTVLIFGG 199
>sp|Q6DFG0|RH21A_XENLA Rho GTPase-activating protein 21-A OS=Xenopus laevis GN=arhgap21-a
PE=2 SV=1
Length = 1926
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 67 ETSTVDADELFSDLKEKWDAVENKSTVLLYGGGAIVAVWLSSTIVGAINSVPLLPKLLE 125
+ VD D +DLK K +A+ K + G I L S I+ + ++ P LPKLLE
Sbjct: 1434 DKQNVDKD---ADLKAKANALSFKDADNIKGTNIITEDKLESDIMHSESTSPCLPKLLE 1489
>sp|Q042P9|MURG_LACGA UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Lactobacillus gasseri (strain ATCC 33323
/ DSM 20243) GN=murG PE=3 SV=1
Length = 370
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 42 FSSSIKQVSESRRFPLLQVRASSSEETSTVDADELFSDLKEKWDAVENKSTVLLYGG 98
F + KQ SE ++ L++ S++ ++ D + DL +KW N TVL++GG
Sbjct: 147 FDDAAKQFSEKKK--LVKTGNPRSQQVLGLNKDNV--DLAKKWGLNPNMPTVLIFGG 199
>sp|P79102|CP3AS_BOVIN Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2 SV=1
Length = 507
Score = 32.0 bits (71), Expect = 1.9, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 13/85 (15%)
Query: 33 LPPRSSTPPFSSSIKQVSESR-------RFPLLQVRASSSEETSTVDADELFSDLKEKWD 85
L P+S+ F+ S+K++ ESR R LLQ+ +S+ + +D + SD++
Sbjct: 240 LFPKSTVDFFTKSVKKIKESRLTDKQMNRVDLLQLMI-NSQNSKEIDNHKALSDIE---- 294
Query: 86 AVENKSTVLLYGGGAIVAVWLSSTI 110
+ +ST+ ++GG + LS I
Sbjct: 295 -LVAQSTIFIFGGYETTSSTLSFII 318
>sp|Q2YDN1|GP161_BOVIN G protein-coupled receptor 161 OS=Bos taurus GN=GPR161 PE=2 SV=1
Length = 528
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 32 CLPPRSSTPPFSSSIKQVSESRRFPLLQVRASSSEETSTVDADELFSDLKEKWDAVENKS 91
C P R S+ F ++Q+ E+ + P+L V+A + D + L + A+E ++
Sbjct: 422 CPPKRRSSVTFEDEVEQIKEAAKNPILHVKADVHKSL-----DSYATSLAK---AIEAEA 473
Query: 92 TVLLYGGGAIVAVWLSSTIVGAIN 115
+ L+G A+ V L++ V I
Sbjct: 474 KINLFGEEALPGVLLTARTVPGIG 497
>sp|Q03696|NGCA_CHICK Neuronal-glial cell adhesion molecule OS=Gallus gallus PE=1 SV=2
Length = 1266
Score = 31.2 bits (69), Expect = 3.0, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 11 TPRVPS--TTTVKVKSSHCFALPCLPPRSSTPP----FSSSIKQVSESRRFPLLQ 59
TP+ P T V+V+ LPC PP S+ PP +S I +++ R + Q
Sbjct: 131 TPQWPKEKVTPVEVEEGDPVVLPCDPPESAVPPKIYWLNSDIVHIAQDERVSMGQ 185
>sp|P0CJ84|HTPG_BACFR Chaperone protein htpG OS=Bacteroides fragilis (strain YCH46)
GN=htpG PE=3 SV=1
Length = 681
Score = 30.4 bits (67), Expect = 4.7, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 37 SSTPPFSSSIKQVSESRRFPLLQVRASSSEETSTVDADELFSDLKEKWDAVENKSTVLLY 96
++ P + ++ V++ R + E+ TV+ DEL +DL +KWD ++ + +
Sbjct: 584 AAIAPIQTELEDVTKRRDALKKKQEGKKDEDIPTVEKDEL-NDLDKKWDELKQQKDSIFA 642
Query: 97 G 97
G
Sbjct: 643 G 643
>sp|P11927|KAR1_YEAST Cell division control protein KAR1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=KAR1 PE=1 SV=2
Length = 433
Score = 30.0 bits (66), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 9 VLTPRVPSTTTVKVKSSHCFALPCLPPRSSTPPFSSSIKQVSESRRFPLLQVRASSSEET 68
VL R P K K SH P + +SS+ SS+ + + PL + + +S+ T
Sbjct: 168 VLNTRNP-----KSKESHIKVKPIINNKSSSQRKSSAALRKQLGKPLPLPYLNSPNSDST 222
Query: 69 STVD-ADELFSD--LKEKWDAVENKSTVLLYGGGAIVAVWLSS 108
T+ +E+F+D L++K + +E+K LL+ +V L S
Sbjct: 223 PTLQRKEEVFTDEVLQKKRELIESKWHRLLFHDKKMVEKKLES 265
>sp|P16320|NOF_DROME 120.7 kDa protein in NOF-FB transposable element OS=Drosophila
melanogaster GN=NOF PE=4 SV=2
Length = 1056
Score = 29.6 bits (65), Expect = 7.8, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 90 KSTVLLYGGGAIVAVWLSSTIVGAINSVPLLPKLLELIGLGYTGWFVYRYLL 141
K +L+ GG++ VW+ ++ N+ P L+E++ Y F Y+ LL
Sbjct: 770 KQDEILHNGGSMGPVWIGKQLLQFKNTCP-FDSLVEILSTAYIDNFYYKSLL 820
>sp|Q8A9B8|HTPG_BACTN Chaperone protein HtpG OS=Bacteroides thetaiotaomicron (strain ATCC
29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN=htpG
PE=3 SV=1
Length = 681
Score = 29.6 bits (65), Expect = 7.9, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 41 PFSSSIKQVSESRRFPLLQVRASSSEETSTVDADELFSDLKEKWDAVENKSTVLLYG 97
P + + VS+ R + E+ T + DEL ++L +KWD ++NK + G
Sbjct: 588 PIQTEMNSVSKRRNELKDSQKDKKEEDIPTAEKDEL-NELDKKWDELKNKKEGIFAG 643
>sp|Q9RNV1|FTSK_SPOUR DNA translocase FtsK OS=Sporosarcina ureae GN=ftsK PE=3 SV=1
Length = 780
Score = 29.6 bits (65), Expect = 9.3, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 22 VKSSHCFALPCLPPRSSTPPFSSSIKQVSESRRFPLLQVRASSSEETSTVDADELFSDLK 81
V +S A+ P +S P SS ++ ++ + ++Q + S ++E ST+D + +D
Sbjct: 239 VDTSEMEAVQENPEPASEPIISSFTAKIEQATQPEIVQEKQSKAQEDSTLDPKDPVTDYP 298
Query: 82 EKWDAVENKSTVL 94
EN+S VL
Sbjct: 299 VMGGEQENESYVL 311
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,892,208
Number of Sequences: 539616
Number of extensions: 2021587
Number of successful extensions: 8223
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 8208
Number of HSP's gapped (non-prelim): 38
length of query: 164
length of database: 191,569,459
effective HSP length: 108
effective length of query: 56
effective length of database: 133,290,931
effective search space: 7464292136
effective search space used: 7464292136
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)