BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031183
(164 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54SD5|PEM2_DICDI Putative phosphatidylethanolamine N-methyltransferase
OS=Dictyostelium discoideum GN=pem2 PE=3 SV=1
Length = 213
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 70 YPLFGFGQFLNFRVYQLLGESGTYYGVRFGTNI-PWVTEFPFGYIKDPQYVGSILSLLA 127
Y L+GFG L Y LG +GTY G FG + VT FPF + +P Y GS++ +A
Sbjct: 103 YILYGFGGILVLAAYLKLGITGTYLGDYFGILMKERVTGFPFNVMNNPMYNGSVMLFIA 161
>sp|P05375|PEM2_YEAST Phosphatidyl-N-methylethanolamine N-methyltransferase
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=OPI3 PE=1 SV=1
Length = 206
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 71 PLFGFGQFLNFRVYQLLGESGTYYGVRFGTNI-PWVTEFPFGYIKDPQYVGSILSLLA 127
LFG GQ L LG +GTY G FG + VT FPF +P Y GS LS L
Sbjct: 103 ALFGLGQVLVLSSMYKLGITGTYLGDYFGILMDERVTGFPFNVSNNPMYQGSTLSFLG 160
>sp|Q54H80|PEMTL_DICDI PEMT/PEM2 methyltransferase family protein OS=Dictyostelium
discoideum GN=DDB_G0289645 PE=3 SV=1
Length = 200
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 73 FGFGQFLNFRVYQLLGESGTYYGVRFGTNIPW-VTEFPFGYIKDPQYVGSILSLL--ACL 129
F FG LN + LG G Y G FG + VT P+ + DPQYVG+ ++ L A
Sbjct: 90 FIFGILLNIWTLKALGIKGMYNGDSFGHIMDSPVTGGPYQFFSDPQYVGTTIAALGVAIR 149
Query: 130 SWVPFRYILLWILGYLFMIRLESKEDP 156
+ + ++ ++G +F I E P
Sbjct: 150 NQSIYGFLCTILVGVVFYISATFVETP 176
>sp|O74827|CHO1_SCHPO Phosphatidyl-N-methylethanolamine N-methyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cho1 PE=3 SV=1
Length = 221
Score = 35.0 bits (79), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 72 LFGFGQFLNFRVYQLLGESGTYYGVRFGTNIP-WVTEFPFGYIKDPQYVGSILSLLACLS 130
+F FG L LG GTY G FG +P V+ FPF +P Y GS L C
Sbjct: 117 IFCFGSVLVLSSMYKLGLVGTYLGDYFGFLLPERVSGFPFNVNDNPMYNGSTL----CFL 172
Query: 131 WVPFRY----ILLWILGYLFMIRLESK-EDPAT 158
RY LL L F+ R+ K E+P T
Sbjct: 173 STALRYGKVAGLLLTLEVFFVYRIALKFEEPFT 205
>sp|Q8S8M9|ALFL6_ARATH PHD finger protein ALFIN-LIKE 6 OS=Arabidopsis thaliana GN=AL6 PE=2
SV=1
Length = 256
Score = 32.7 bits (73), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 47 LKLLQFISLYSVSSLSW--PPPFYFYPLFGFGQFLNFRVYQLLGESGTYYGVRFGT 100
++ ++SL +V S SW FYF FGFG+ R++Q++ E T + V G
Sbjct: 85 MQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNERKRLFQMINELPTIFEVVSGN 140
>sp|Q8LA16|ALFL7_ARATH PHD finger protein ALFIN-LIKE 7 OS=Arabidopsis thaliana GN=AL7 PE=1
SV=1
Length = 252
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 47 LKLLQFISLYSVSSLSW--PPPFYFYPLFGFGQFLNFRVYQLLGESGTYYGVRFGT 100
++ +ISL +V S SW FYF FGFG+ R++Q++ + T + V G
Sbjct: 85 MQEKDWISLVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMINDLPTIFEVVTGN 140
>sp|Q9DBM1|GPTC1_MOUSE G patch domain-containing protein 1 OS=Mus musculus GN=Gpatch1 PE=2
SV=1
Length = 930
Score = 32.0 bits (71), Expect = 1.9, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 36/91 (39%), Gaps = 14/91 (15%)
Query: 20 WTQPQTWVNLCGKGKDPSKIMAYVSHFLKLLQFISLYSVSSLSWPPP---------FYFY 70
WT P+ + N K+P + + YV L+ S S +PPP YF
Sbjct: 324 WTAPKQYKN----QKEPERDLRYVGKILEGFSLASKPLSSKKIYPPPQLPRDYRPVHYFR 379
Query: 71 PLFGFGQFLNFRVYQLLGESGTYYGVRFGTN 101
P+ N V Q+L ES G GT+
Sbjct: 380 PVVA-ATAENAHVLQVLSESSGKAGQDVGTH 409
>sp|Q975P6|RGYR2_SULTO Reverse gyrase 2 OS=Sulfolobus tokodaii (strain DSM 16993 / JCM
10545 / NBRC 100140 / 7) GN=rgy2 PE=3 SV=2
Length = 1233
Score = 31.6 bits (70), Expect = 2.2, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 6/54 (11%)
Query: 78 FLNFRVYQLLGESGTYYGVRF-GTNIPWVTEFPFGYIKDPQY---VGSILSLLA 127
F N +Y L+G S T+YG+ G +IPW ++ ++ P++ +G +++L+A
Sbjct: 372 FANGNIYALIG-SATHYGILVRGIDIPWRVKYAI-FVGIPKFKFKIGEVMNLVA 423
>sp|Q40359|ALFIN_MEDSA PHD finger protein Alfin1 OS=Medicago sativa GN=ALFIN-1 PE=1 SV=1
Length = 257
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 47 LKLLQFISLYSVSSLSW--PPPFYFYPLFGFGQFLNFRVYQLLGESGTYYGVRFGT 100
++ ++SL +V S SW FYF FGFG+ R++Q++ + T + + GT
Sbjct: 86 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNDRKRLFQMINDLPTVFELATGT 141
>sp|Q7YRH6|PEMT_BOVIN Phosphatidylethanolamine N-methyltransferase OS=Bos taurus GN=PEMT
PE=2 SV=1
Length = 199
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 58 VSSLSWPPPFYF-YPLFGFGQFLNFRVYQLLGESGTYYGVRFGT-NIPWVTEFPFGYIKD 115
+ SL P ++ L G G + LG +GT+ G FG VT FPF + +
Sbjct: 81 MQSLDNPAVYHVGLALLGVGGVFVLSSFLALGFTGTFLGDYFGILKEARVTMFPFSVLDN 140
Query: 116 PQYVGSILSLL--ACLSWVPFRYILLWILGYLFMIRLESKE 154
P Y GS L A + P +L ++ ++M+ + +E
Sbjct: 141 PMYWGSTAIYLGWAIVHASPTGLLLTALVALIYMVAIVYEE 181
>sp|Q9VG40|CP134_DROME Probable cytochrome P450 313a4 OS=Drosophila melanogaster
GN=Cyp313a4 PE=2 SV=4
Length = 494
Score = 29.6 bits (65), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 70 YPLFGFGQFLNFRVYQLLGESGTYYGVRFGTNIPWVTEFPFGYIKDPQYVGSILSLLACL 129
YP+ G +L R +L G + T W+ PF + DPQ V I + C+
Sbjct: 38 YPILGMAHWL-MRREDILNAFGCFLDKHGPTIFSWLGPIPFMIVSDPQVVQDIFTSPHCV 96
Query: 130 S 130
+
Sbjct: 97 N 97
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.147 0.504
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,662,490
Number of Sequences: 539616
Number of extensions: 3018588
Number of successful extensions: 6043
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 6030
Number of HSP's gapped (non-prelim): 19
length of query: 164
length of database: 191,569,459
effective HSP length: 108
effective length of query: 56
effective length of database: 133,290,931
effective search space: 7464292136
effective search space used: 7464292136
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 56 (26.2 bits)