Query 031183
Match_columns 164
No_of_seqs 108 out of 163
Neff 3.9
Searched_HMMs 13730
Date Mon Mar 25 16:33:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031183.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031183hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1prtb2 d.169.1.2 (B:4-89) Per 17.8 18 0.0013 24.1 0.9 14 89-102 55-68 (86)
2 d1prtc2 d.169.1.2 (C:4-89) Per 17.1 18 0.0013 24.1 0.7 14 89-102 55-68 (86)
3 d1h3ga3 c.1.8.1 (A:96-517) Cyc 9.5 54 0.004 24.5 1.5 16 87-102 349-364 (422)
4 d1ef1a3 d.15.1.4 (A:4-87) Moes 9.1 58 0.0042 20.7 1.3 26 73-101 20-45 (84)
5 d1r7aa2 c.1.8.1 (A:1-434) Sucr 8.2 40 0.0029 24.0 0.2 15 88-102 373-387 (434)
6 d1gg3a3 d.15.1.4 (A:1-81) Eryt 7.8 70 0.0051 20.2 1.3 26 73-101 20-45 (81)
7 d1ud2a2 c.1.8.1 (A:1-390) Bact 7.5 35 0.0026 24.3 -0.4 15 88-102 357-371 (390)
8 d1eh9a3 c.1.8.1 (A:91-490) Gly 6.9 64 0.0046 23.8 0.8 16 88-103 319-334 (400)
9 d1m7xa3 c.1.8.1 (A:227-622) 1, 6.8 54 0.0039 23.4 0.3 15 88-102 336-350 (396)
10 d1h4ra3 d.15.1.4 (A:20-103) Me 6.8 86 0.0062 19.8 1.3 26 73-101 21-46 (84)
No 1
>d1prtb2 d.169.1.2 (B:4-89) Pertussis toxin, S2/S3 subunits, N-terminal domain {Bordetella pertussis [TaxId: 520]}
Probab=17.83 E-value=18 Score=24.05 Aligned_cols=14 Identities=43% Similarity=0.733 Sum_probs=10.8
Q ss_pred ccceeecccccccC
Q 031183 89 ESGTYYGVRFGTNI 102 (164)
Q Consensus 89 ~~GTY~Gd~fGilm 102 (164)
-+|||+|.++|=..
T Consensus 55 ydgtylg~~yggii 68 (86)
T d1prtb2 55 YDGTYLGGEYGGVI 68 (86)
T ss_dssp SSEEEECGGGCSEE
T ss_pred eccceeccccCcee
Confidence 48999998887444
No 2
>d1prtc2 d.169.1.2 (C:4-89) Pertussis toxin, S2/S3 subunits, N-terminal domain {Bordetella pertussis [TaxId: 520]}
Probab=17.14 E-value=18 Score=24.05 Aligned_cols=14 Identities=43% Similarity=0.738 Sum_probs=10.6
Q ss_pred ccceeecccccccC
Q 031183 89 ESGTYYGVRFGTNI 102 (164)
Q Consensus 89 ~~GTY~Gd~fGilm 102 (164)
-+|||+|.++|=..
T Consensus 55 ydgtylg~~yggii 68 (86)
T d1prtc2 55 YDGTYLGQAYGGII 68 (86)
T ss_dssp SSSEEECTTTTSEE
T ss_pred eccceeccccCcee
Confidence 48999998886443
No 3
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]}
Probab=9.53 E-value=54 Score=24.46 Aligned_cols=16 Identities=13% Similarity=-0.083 Sum_probs=13.4
Q ss_pred hcccceeecccccccC
Q 031183 87 LGESGTYYGVRFGTNI 102 (164)
Q Consensus 87 LG~~GTY~Gd~fGilm 102 (164)
-|+.-.|+|||+|...
T Consensus 349 pG~P~iy~G~E~G~~~ 364 (422)
T d1h3ga3 349 PRIPQFYSGDEILMTS 364 (422)
T ss_dssp SSEEEEETTGGGTCCC
T ss_pred CCCcEEEcChhhCCcC
Confidence 4888899999999644
No 4
>d1ef1a3 d.15.1.4 (A:4-87) Moesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.08 E-value=58 Score=20.66 Aligned_cols=26 Identities=23% Similarity=0.160 Sum_probs=21.2
Q ss_pred hccccchhhHHHHHhcccceeeccccccc
Q 031183 73 FGFGQFLNFRVYQLLGESGTYYGVRFGTN 101 (164)
Q Consensus 73 ~~~G~~L~~~s~~~LG~~GTY~Gd~fGil 101 (164)
=+.|+-|--.+...||+..+ ||||+.
T Consensus 20 ~a~G~~l~~~Vc~~l~L~E~---dYFGL~ 45 (84)
T d1ef1a3 20 NTTGKQLFDQVVKTIGLREV---WFFGLQ 45 (84)
T ss_dssp TCBHHHHHHHHHHHHTCCCG---GGEEEE
T ss_pred CChHHHHHHHHHHHcCCccc---ccceEE
Confidence 35788888889999999875 788875
No 5
>d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]}
Probab=8.24 E-value=40 Score=23.96 Aligned_cols=15 Identities=20% Similarity=0.266 Sum_probs=13.0
Q ss_pred cccceeecccccccC
Q 031183 88 GESGTYYGVRFGTNI 102 (164)
Q Consensus 88 G~~GTY~Gd~fGilm 102 (164)
|+.-.|+|||+|...
T Consensus 373 GiP~iyyGdE~G~~~ 387 (434)
T d1r7aa2 373 GVPQVYYVGALAGKN 387 (434)
T ss_dssp SEEEEEHHHHTTCCC
T ss_pred CcceEEcchhhCCCC
Confidence 999999999999543
No 6
>d1gg3a3 d.15.1.4 (A:1-81) Erythroid membrane protein 4.1R {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.79 E-value=70 Score=20.15 Aligned_cols=26 Identities=31% Similarity=0.167 Sum_probs=21.7
Q ss_pred hccccchhhHHHHHhcccceeeccccccc
Q 031183 73 FGFGQFLNFRVYQLLGESGTYYGVRFGTN 101 (164)
Q Consensus 73 ~~~G~~L~~~s~~~LG~~GTY~Gd~fGil 101 (164)
=+.|+.|-=.+...||+..+ ||||+.
T Consensus 20 ~~~G~~l~~~Vc~~l~l~E~---~YFGL~ 45 (81)
T d1gg3a3 20 HAKGQDLLKRVCEHLNLLEE---DYFGLA 45 (81)
T ss_dssp TCCHHHHHHHHHHHHTTCSC---CSSSCE
T ss_pred CCcHHHHHHHHHHHcCCccc---ccceEE
Confidence 35788888889999999887 799985
No 7
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]}
Probab=7.48 E-value=35 Score=24.34 Aligned_cols=15 Identities=27% Similarity=0.598 Sum_probs=13.0
Q ss_pred cccceeecccccccC
Q 031183 88 GESGTYYGVRFGTNI 102 (164)
Q Consensus 88 G~~GTY~Gd~fGilm 102 (164)
|+.=.|+|||+|...
T Consensus 357 G~P~iy~GdE~G~~~ 371 (390)
T d1ud2a2 357 GYPNVFYGDYYGIPN 371 (390)
T ss_dssp SEEEEEHHHHHCBGG
T ss_pred CCeEEEchhhcCCCC
Confidence 888899999999764
No 8
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]}
Probab=6.94 E-value=64 Score=23.78 Aligned_cols=16 Identities=19% Similarity=0.353 Sum_probs=13.2
Q ss_pred cccceeecccccccCC
Q 031183 88 GESGTYYGVRFGTNIP 103 (164)
Q Consensus 88 G~~GTY~Gd~fGilm~ 103 (164)
|+.-.|+|||+|...+
T Consensus 319 GiP~iy~G~E~G~~~~ 334 (400)
T d1eh9a3 319 YIPMIFMGEEYGEENP 334 (400)
T ss_dssp SCCEEESSGGGTCCCC
T ss_pred CCCEEECChhhCCCCC
Confidence 7777899999997654
No 9
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]}
Probab=6.78 E-value=54 Score=23.42 Aligned_cols=15 Identities=20% Similarity=0.388 Sum_probs=12.2
Q ss_pred cccceeecccccccC
Q 031183 88 GESGTYYGVRFGTNI 102 (164)
Q Consensus 88 G~~GTY~Gd~fGilm 102 (164)
|+.-.|+|||+|...
T Consensus 336 G~P~IYyGdEiG~~~ 350 (396)
T d1m7xa3 336 GKKLLFMGNEFAQGR 350 (396)
T ss_dssp SEEEEETTTTTTCSS
T ss_pred CccEeecccccCCCC
Confidence 677779999999654
No 10
>d1h4ra3 d.15.1.4 (A:20-103) Merlin {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.76 E-value=86 Score=19.83 Aligned_cols=26 Identities=31% Similarity=0.089 Sum_probs=21.4
Q ss_pred hccccchhhHHHHHhcccceeeccccccc
Q 031183 73 FGFGQFLNFRVYQLLGESGTYYGVRFGTN 101 (164)
Q Consensus 73 ~~~G~~L~~~s~~~LG~~GTY~Gd~fGil 101 (164)
-+.|+-|-=.+...||+..+ ||||+.
T Consensus 21 ~a~G~~L~d~Vc~~L~L~E~---~YFGL~ 46 (84)
T d1h4ra3 21 KWKGKDLFDLVCRTLGLRET---WFFGLQ 46 (84)
T ss_dssp TCBHHHHHHHHHHHHTCCCG---GGEEEE
T ss_pred CChHHHHHHHHHHHcCCccc---ccceEE
Confidence 46788888899999999876 789974
Done!