BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031186
(164 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9HRY3|DNAJ_HALSA Chaperone protein DnaJ OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=dnaJ PE=3 SV=1
Length = 391
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 40/118 (33%)
Query: 57 TAASVAIAATVVGAAATLLVRRTKGSEETEIPLKTCEDCGGSGI--------CPECKGEG 108
T +V ++ G + + VRR + +C DCGGSG CP+C G+G
Sbjct: 140 TDLTVTLSEAYRGVSKQVTVRRPE----------SCADCGGSGYPEDADVRTCPQCDGQG 189
Query: 109 FVLKKLSEETAERARLTAKNMATRYTAGLPKKWSYCTKCS-----SSRSCATCGGRGK 161
V + R T G ++ C++C S +C+TCGG+G+
Sbjct: 190 VVTQ---------VRQTP--------LGRVQQRQECSRCGGEGELHSETCSTCGGQGQ 230
>sp|B0R3H3|DNAJ_HALS3 Chaperone protein DnaJ OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=dnaJ PE=3 SV=1
Length = 391
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 40/118 (33%)
Query: 57 TAASVAIAATVVGAAATLLVRRTKGSEETEIPLKTCEDCGGSGI--------CPECKGEG 108
T +V ++ G + + VRR + +C DCGGSG CP+C G+G
Sbjct: 140 TDLTVTLSEAYRGVSKQVTVRRPE----------SCADCGGSGYPEDADVRTCPQCDGQG 189
Query: 109 FVLKKLSEETAERARLTAKNMATRYTAGLPKKWSYCTKCS-----SSRSCATCGGRGK 161
V + R T G ++ C++C S +C+TCGG+G+
Sbjct: 190 VVTQ---------VRQTP--------LGRVQQRQECSRCGGEGELHSETCSTCGGQGQ 230
>sp|Q8W3F9|CSLD1_ORYSJ Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica
GN=CSLD1 PE=2 SV=1
Length = 1127
Score = 35.4 bits (80), Expect = 0.18, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Query: 57 TAASVAIAATVVGAAATLLVRRTKGSE--ETEIPLKTCEDC------GGSGICPECK 105
++A ++A +V + ++R +G++ E K C DC GG G+CP CK
Sbjct: 102 SSARATVSACMVQGCGSKIMRNGRGADILPCECDFKICVDCFTDAVKGGGGVCPGCK 158
>sp|A2ZAK8|CSLD1_ORYSI Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica
GN=CSLD1 PE=2 SV=2
Length = 1127
Score = 35.4 bits (80), Expect = 0.18, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Query: 57 TAASVAIAATVVGAAATLLVRRTKGSE--ETEIPLKTCEDC------GGSGICPECK 105
++A ++A +V + ++R +G++ E K C DC GG G+CP CK
Sbjct: 102 SSARATVSACMVQGCGSKIMRNGRGADILPCECDFKICVDCFTDAVKGGGGVCPGCK 158
>sp|Q58598|Y1198_METJA Uncharacterized protein MJ1198 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1198 PE=1 SV=1
Length = 761
Score = 33.9 bits (76), Expect = 0.50, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 20/84 (23%)
Query: 92 CEDCGGSG-------ICPECKGEGFVLKKLSEETAERARLTAKNMATRYTAGLPKKWSYC 144
C C G+G CP C+G GF+ +E + + + K ++ R T L C
Sbjct: 5 CPICDGTGKKVVKYKTCPVCEGTGFI-----DEFSPKQHM--KRVSKRATYDLDYGEIPC 57
Query: 145 TKCSSS------RSCATCGGRGKL 162
KC + C CGG GK+
Sbjct: 58 PKCKGTGKVPVYAKCDFCGGSGKV 81
>sp|P53940|APJ1_YEAST J domain-containing protein APJ1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=APJ1 PE=1 SV=1
Length = 528
Score = 32.7 bits (73), Expect = 1.00, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 7/31 (22%)
Query: 90 KTCEDCGGSG-------ICPECKGEGFVLKK 113
+TC DCGG+G IC +C+G GF+ ++
Sbjct: 244 QTCADCGGAGVFVKNKDICQQCQGLGFIKER 274
>sp|B9KAB9|DNAJ_THENN Chaperone protein DnaJ OS=Thermotoga neapolitana (strain ATCC 49049
/ DSM 4359 / NS-E) GN=dnaJ PE=3 SV=1
Length = 370
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 36/91 (39%), Gaps = 39/91 (42%)
Query: 85 TEIPLK-----TCEDCGGSGI--------CPECKGEGFVLKKLSEETAERARLTAKNMAT 131
TEIP++ TC CGG+G+ CP C G G ++ EE
Sbjct: 145 TEIPIEYERYETCPRCGGTGVEPDSGYISCPRCGGTG----RIREE-------------- 186
Query: 132 RYTAGLPKKWSYCTKCSSSRSCATCGGRGKL 162
K S+ S R+C CGG G++
Sbjct: 187 --------KRSFFGYFVSERTCDECGGTGRV 209
Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 5/30 (16%)
Query: 90 KTCEDCGGSG-----ICPECKGEGFVLKKL 114
+TC++CGG+G +C EC G G VL+++
Sbjct: 198 RTCDECGGTGRVPQELCHECGGSGRVLRRV 227
>sp|Q05646|DNAJ_ERYRH Chaperone protein DnaJ OS=Erysipelothrix rhusiopathiae GN=dnaJ PE=2
SV=1
Length = 370
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 5/29 (17%)
Query: 91 TCEDCGGSGI-----CPECKGEGFVLKKL 114
TC DCGGSG C EC G+GF K++
Sbjct: 189 TCPDCGGSGKTITKRCGECHGKGFNTKRV 217
>sp|A5UMW9|PURL_METS3 Phosphoribosylformylglycinamidine synthase 2 OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=purL PE=3
SV=1
Length = 716
Score = 31.6 bits (70), Expect = 2.4, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 22/112 (19%)
Query: 27 GLHGKAFSSIDIKSQEQERKLPTVSSALPETAASVAIAATVVGAAATLLVRRTKGSEETE 86
G+HG F+S ++ S + P V A P T V+ A+ +L E
Sbjct: 202 GIHGVTFASEELTSDSETEDRPAVQVADPFTKKR------VLEASLEIL---------DE 246
Query: 87 IPLKTCEDCGGSGICPECKGEGFVLKKLSEETAERARLTAKNMATRYTAGLP 138
I + +D GG G+ C + +L +E+ AR+ +N+ R T P
Sbjct: 247 INVSGVKDLGGGGL--TC-----CISELVDESNNGARVDLRNIPLRETGMTP 291
>sp|Q84BU3|DNAJ_LACAC Chaperone protein DnaJ OS=Lactobacillus acidophilus (strain ATCC
700396 / NCK56 / N2 / NCFM) GN=dnaJ PE=3 SV=1
Length = 384
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 59/147 (40%), Gaps = 38/147 (25%)
Query: 27 GLHGKAFSSIDIKSQEQERKLPTVSSALPETAASVAIAATVVGAAATLLVRRTKGSEETE 86
G G F I + Q+R PT P+ + T+ A + ++T+ S +
Sbjct: 97 GDFGDIFGDIFGQGARQQRVDPT----QPQRGQDLDYTLTIDFMDA-INGKKTQVSYTRD 151
Query: 87 IPLKTCEDCGGSG--------ICPECKGEGFVLKKLSEETAERARLTAKNMATRYTAGLP 138
+TCE CGG+G C +C G G + +T ++M G+
Sbjct: 152 ---ETCETCGGNGCEKGTHPITCDKCHGTGVMT------------VTQQSM-----LGMI 191
Query: 139 KKWSYCTKCSS-----SRSCATCGGRG 160
++ + C KC+ C TCGG+G
Sbjct: 192 RRQTTCDKCNGRGVIIEHPCKTCGGKG 218
>sp|Q74H58|DNAJ_GEOSL Chaperone protein DnaJ OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=dnaJ PE=3 SV=1
Length = 373
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 39/88 (44%)
Query: 84 ETEIPL-KTCEDCGGSG--------ICPECKGEGFVLKKLSEETAERARLTAKNMATRYT 134
E ++P K C DCGGSG +CP C+G G V R+
Sbjct: 140 EIQVPYGKRCGDCGGSGAKPGTEPKVCPTCRGAGQV---------------------RFQ 178
Query: 135 AGLPKKWSYCTKCSSSRSCATCGGRGKL 162
G S S++C C G G++
Sbjct: 179 QGF---------FSVSKTCNHCNGEGRV 197
>sp|A4J3N3|KCY_DESRM Cytidylate kinase OS=Desulfotomaculum reducens (strain MI-1) GN=cmk
PE=3 SV=1
Length = 222
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 55 PETAASVAIAATVVGAAATLLVRRTKGSEETEIPLKTCEDCGGSGICPECKGEGFVLKKL 114
PE +V+I A + G L+ R+ + +EE + + D G+ + P+ K + F L
Sbjct: 92 PEVTNNVSIVAKIAGVREVLVQRQREMAEEAGVVMD-GRDI-GTVVLPKAKAKFF----L 145
Query: 115 SEETAERARLTAKNM 129
+ ERAR AK M
Sbjct: 146 TASAEERARRRAKEM 160
>sp|Q04Y48|DNAJ_LEPBL Chaperone protein DnaJ OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain L550) GN=dnaJ PE=3 SV=1
Length = 371
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 33/89 (37%), Gaps = 35/89 (39%)
Query: 86 EIP-LKTCEDCGGSG--------ICPECKGEGFVLKKLSEETAERARLTAKNMATRYTAG 136
EIP L++C DC GSG CP+C G G + R T G
Sbjct: 145 EIPRLESCGDCNGSGAAKGSSPTTCPDCGGSGQI---------------------RRTQG 183
Query: 137 LPKKWSYCTKCSS-----SRSCATCGGRG 160
+ C C S C TCGG+G
Sbjct: 184 FFSVATTCPTCRGKGTTISNPCKTCGGQG 212
>sp|Q04VC7|DNAJ_LEPBJ Chaperone protein DnaJ OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain JB197) GN=dnaJ PE=3 SV=1
Length = 371
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 33/89 (37%), Gaps = 35/89 (39%)
Query: 86 EIP-LKTCEDCGGSG--------ICPECKGEGFVLKKLSEETAERARLTAKNMATRYTAG 136
EIP L++C DC GSG CP+C G G + R T G
Sbjct: 145 EIPRLESCGDCNGSGAAKGSSPTTCPDCGGSGQI---------------------RRTQG 183
Query: 137 LPKKWSYCTKCSS-----SRSCATCGGRG 160
+ C C S C TCGG+G
Sbjct: 184 FFSVATTCPTCRGKGTTISNPCKTCGGQG 212
>sp|Q5PEJ4|RLMD_SALPA 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD OS=Salmonella
paratyphi A (strain ATCC 9150 / SARB42) GN=rlmD PE=3
SV=1
Length = 431
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 11/106 (10%)
Query: 50 VSSALPETAASVAIAATVVGAAATLLVRRTKGSEETEIPLKTCEDCGGSGICPECKGE-- 107
+ LPE +A V I A + RR S E E P C G+C C+ +
Sbjct: 41 IPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETP-----RCPHFGVCGGCQQQHV 95
Query: 108 GFVLKKLSEETAERARLTAKNMATRYTAGLPKKWSYCTKCSSSRSC 153
G L++ S ++A ARL K+ AG P W Y + S +C
Sbjct: 96 GIDLQQRS-KSAALARLM-KHEVNDIIAGAP--WGYRRRARLSLNC 137
>sp|B0SRF0|DNAJ_LEPBP Chaperone protein DnaJ OS=Leptospira biflexa serovar Patoc (strain
Patoc 1 / ATCC 23582 / Paris) GN=dnaJ PE=3 SV=1
Length = 375
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 33/89 (37%), Gaps = 35/89 (39%)
Query: 86 EIP-LKTCEDCGGSG--------ICPECKGEGFVLKKLSEETAERARLTAKNMATRYTAG 136
EIP L+TC DC GSG +CP+C G G V R T G
Sbjct: 148 EIPRLETCVDCTGSGASKGSSPTVCPDCSGTGQV---------------------RRTQG 186
Query: 137 LPKKWSYCTKCSS-----SRSCATCGGRG 160
+ C +C S C TC G G
Sbjct: 187 FFSVTTTCPRCKGKGKVISNPCKTCKGEG 215
>sp|B0SHT0|DNAJ_LEPBA Chaperone protein DnaJ OS=Leptospira biflexa serovar Patoc (strain
Patoc 1 / Ames) GN=dnaJ PE=3 SV=1
Length = 375
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 33/89 (37%), Gaps = 35/89 (39%)
Query: 86 EIP-LKTCEDCGGSG--------ICPECKGEGFVLKKLSEETAERARLTAKNMATRYTAG 136
EIP L+TC DC GSG +CP+C G G V R T G
Sbjct: 148 EIPRLETCVDCTGSGASKGSSPTVCPDCSGTGQV---------------------RRTQG 186
Query: 137 LPKKWSYCTKCSS-----SRSCATCGGRG 160
+ C +C S C TC G G
Sbjct: 187 FFSVTTTCPRCKGKGKVISNPCKTCKGEG 215
>sp|Q8XIT1|DNAJ_CLOPE Chaperone protein DnaJ OS=Clostridium perfringens (strain 13 / Type
A) GN=dnaJ PE=3 SV=1
Length = 387
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 5/28 (17%)
Query: 91 TCEDCGGSG-----ICPECKGEGFVLKK 113
TC+ CGG+G CP+CKG+G V K
Sbjct: 199 TCDQCGGTGKVIEDPCPDCKGKGTVRKN 226
>sp|F1MF74|MICA2_BOVIN Protein-methionine sulfoxide oxidase MICAL2 OS=Bos taurus GN=MICAL2
PE=3 SV=2
Length = 1101
Score = 30.8 bits (68), Expect = 4.3, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 49 TVSSALPETAASVAIAATVVGAAATLLV---------RRTKGSEETEIPLKTCE-DCGGS 98
TV S P +V ++ +GAAA +LV + S + E KT + GGS
Sbjct: 917 TVDSVSPARKLTVGKVSSGIGAAAEVLVNLYLNDHRPKTQATSPDLESVRKTFPLNVGGS 976
Query: 99 GICPECKGEGFVLKKLSEE 117
C CK +V+++LS E
Sbjct: 977 DTCYFCKKRVYVMERLSAE 995
>sp|Q7NBW0|DNAJ_MYCGA Chaperone protein DnaJ OS=Mycoplasma gallisepticum (strain R(low /
passage 15 / clone 2)) GN=dnaJ PE=3 SV=2
Length = 391
Score = 30.8 bits (68), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 7/30 (23%)
Query: 91 TCEDCGGSG-------ICPECKGEGFVLKK 113
TC DC GSG C +C GEGF++++
Sbjct: 157 TCPDCNGSGSADGDVITCSDCNGEGFLVEQ 186
>sp|A5UL38|RNP4_METS3 Ribonuclease P protein component 4 OS=Methanobrevibacter smithii
(strain PS / ATCC 35061 / DSM 861) GN=rnp4 PE=3 SV=1
Length = 121
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 117 ETAERARLTAKNMATRYTAGLPKKWS--YCTKCS 148
E + R + AK ++T+Y +P KW+ YC +C+
Sbjct: 34 ERSNRYVVLAKKLSTKYNTKIPDKWARRYCKRCN 67
>sp|B1LCI2|DNAJ_THESQ Chaperone protein DnaJ OS=Thermotoga sp. (strain RQ2) GN=dnaJ PE=3
SV=1
Length = 369
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 5/30 (16%)
Query: 90 KTCEDCGGSG-----ICPECKGEGFVLKKL 114
+TCE CGG+G C EC G G VL+K+
Sbjct: 197 RTCERCGGTGKIPREYCHECGGSGRVLRKV 226
Score = 29.6 bits (65), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 39/90 (43%)
Query: 86 EIPLK-----TCEDCGGSGI--------CPECKGEGFVLKKLSEETAERARLTAKNMATR 132
EIP++ TC CGG+G+ CP C G G ++ EE
Sbjct: 145 EIPVEYERYETCPRCGGTGVEPNAGYINCPSCGGTG----RIREE--------------- 185
Query: 133 YTAGLPKKWSYCTKCSSSRSCATCGGRGKL 162
+ S+ S R+C CGG GK+
Sbjct: 186 -------RRSFFGYFVSERTCERCGGTGKI 208
>sp|Q9WZV3|DNAJ_THEMA Chaperone protein DnaJ OS=Thermotoga maritima (strain ATCC 43589 /
MSB8 / DSM 3109 / JCM 10099) GN=dnaJ PE=3 SV=1
Length = 369
Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 5/30 (16%)
Query: 90 KTCEDCGGSG-----ICPECKGEGFVLKKL 114
+TCE CGG+G C EC G G VL+K+
Sbjct: 197 RTCERCGGTGKIPREYCHECGGSGRVLRKV 226
>sp|A5IIT4|DNAJ_THEP1 Chaperone protein DnaJ OS=Thermotoga petrophila (strain RKU-1 /
ATCC BAA-488 / DSM 13995) GN=dnaJ PE=3 SV=1
Length = 369
Score = 30.4 bits (67), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 5/30 (16%)
Query: 90 KTCEDCGGSG-----ICPECKGEGFVLKKL 114
+TCE CGG+G C EC G G VL+K+
Sbjct: 197 RTCERCGGTGKIPREYCHECGGSGRVLRKV 226
>sp|Q7VG06|DNAJ_HELHP Chaperone protein DnaJ OS=Helicobacter hepaticus (strain ATCC 51449
/ 3B1) GN=dnaJ PE=3 SV=1
Length = 385
Score = 30.4 bits (67), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 13/33 (39%)
Query: 89 LKTCEDCGGSG-------------ICPECKGEG 108
L TC+DCGG G CP CKGEG
Sbjct: 162 LNTCKDCGGKGQVYMRQGFMTFAQTCPTCKGEG 194
>sp|A0LJ41|DNAJ_SYNFM Chaperone protein DnaJ OS=Syntrophobacter fumaroxidans (strain DSM
10017 / MPOB) GN=dnaJ PE=3 SV=1
Length = 384
Score = 30.4 bits (67), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 34/86 (39%)
Query: 89 LKTCEDCGGSG--------ICPECKGEGFVLKKLSEETAERARLTAKNMATRYTAGLPKK 140
L TCE+C GSG +CP C+G G V++ + G +
Sbjct: 144 LTTCEECNGSGAEPGTRETVCPVCQGSGQVVQ---------------------SQGFFRI 182
Query: 141 WSYCTKCSSS-----RSCATCGGRGK 161
+ CT+C C TC G+G+
Sbjct: 183 SATCTRCQGMGKVLVSPCKTCNGQGR 208
>sp|A6LJ63|DNAJ_THEM4 Chaperone protein DnaJ OS=Thermosipho melanesiensis (strain BI429 /
DSM 12029) GN=dnaJ PE=3 SV=1
Length = 373
Score = 30.4 bits (67), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 35/96 (36%)
Query: 85 TEIPLK-----TCEDCGGSGI--------CPECKGEGFVLKKLSEETAERARLTAKNMAT 131
+IPL+ CE C G G+ CP+C G G V E R +
Sbjct: 145 VKIPLEYDRYEVCEHCHGEGVEPGSGWVTCPKCHGTGTV--------REERRTFLGVIVN 196
Query: 132 RYTAGLPKKWSYCTKCSSS-----RSCATCGGRGKL 162
+YT C +C + SC CGG G++
Sbjct: 197 QYT---------CNQCGGTGKIPGESCRVCGGTGRI 223
>sp|Q5KWZ8|DNAJ_GEOKA Chaperone protein DnaJ OS=Geobacillus kaustophilus (strain HTA426)
GN=dnaJ PE=3 SV=1
Length = 382
Score = 30.0 bits (66), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 45/130 (34%), Gaps = 33/130 (25%)
Query: 49 TVSSALPETAASVAIAATVVGAAATLLVRRTKGSEETEIPL---KTCEDCGGSGI----- 100
T A P AS V TL +ETEI + +TC+ C GSG
Sbjct: 104 TFFGAGPRRRASGPRKGADVEYMMTLTFEEAAFGKETEIEIPREETCDTCQGSGAKPGTS 163
Query: 101 ---CPECKGEGFVLKKLSEETAERARLTAKNMATRYTAGLPKKWSYCTKCSSS-----RS 152
CP C G G V SE+ R+ + C C +
Sbjct: 164 PTSCPHCHGSGQV---TSEQATPFGRIVNRRT--------------CPVCGGTGRYIPEK 206
Query: 153 CATCGGRGKL 162
C TCGG G++
Sbjct: 207 CPTCGGTGRV 216
>sp|B8CXL0|DNAJ_HALOH Chaperone protein DnaJ OS=Halothermothrix orenii (strain H 168 /
OCM 544 / DSM 9562) GN=dnaJ PE=3 SV=1
Length = 375
Score = 30.0 bits (66), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 34/81 (41%)
Query: 90 KTCEDCGGSG--------ICPECKGEGFVLKKLSEETAERARLTAKNMATRYTAGLPKKW 141
+TC+ C G+G CP+C G G V RYT P
Sbjct: 143 ETCDTCNGTGAKPGTSPKTCPQCNGSGQV---------------------RYTQRTP--- 178
Query: 142 SYCTKCSSSRSCATCGGRGKL 162
+ + +R+C CGGRG +
Sbjct: 179 --FGQFAQTRTCDRCGGRGTI 197
>sp|O27352|DNAJ_METTH Chaperone protein DnaJ OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=dnaJ PE=3 SV=1
Length = 376
Score = 29.6 bits (65), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 17/41 (41%)
Query: 90 KTCEDCGGSG-----------------ICPECKGEGFVLKK 113
+TC+ CGGSG CP+C+GEG V++K
Sbjct: 163 RTCQTCGGSGQVRQVRNTILGQMMNITTCPDCQGEGTVVEK 203
>sp|P15619|SRYC_DROME Serendipity locus protein H-1 OS=Drosophila melanogaster GN=wdn
PE=1 SV=2
Length = 869
Score = 29.6 bits (65), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 42/108 (38%), Gaps = 26/108 (24%)
Query: 56 ETAASVAIAATVVGAAATLLVRRTKGSEETEIPLKTCEDCGGSGICPECKGEGFVLKKLS 115
++A SVA AA++ AA+ TK E PL C DC G+ E E V K
Sbjct: 239 KSAESVADAASMPPPAAS----ETKPLEVDPAPLHKCLDCN--GLLLETPDE--VAKH-- 288
Query: 116 EETAERARLT----------------AKNMATRYTAGLPKKWSYCTKC 147
E A R RLT K++ T T G W C C
Sbjct: 289 EAAAHRLRLTYRCSECQREFELLAGLKKHLKTHRTEGRKDTWKKCPDC 336
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.127 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,103,216
Number of Sequences: 539616
Number of extensions: 1853679
Number of successful extensions: 7823
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 7618
Number of HSP's gapped (non-prelim): 248
length of query: 164
length of database: 191,569,459
effective HSP length: 108
effective length of query: 56
effective length of database: 133,290,931
effective search space: 7464292136
effective search space used: 7464292136
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)