Query 031189
Match_columns 164
No_of_seqs 116 out of 126
Neff 3.7
Searched_HMMs 13730
Date Mon Mar 25 16:42:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031189.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031189hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1tv5a1 c.1.4.1 (A:158-566) Di 32.7 4.4 0.00032 33.0 0.1 20 56-75 70-89 (409)
2 d1kx7a_ a.3.1.1 (A:) Mono-heme 29.0 40 0.0029 20.3 4.4 18 50-67 60-77 (81)
3 d1ijwc_ a.4.1.2 (C:) HIN recom 28.7 17 0.0012 21.4 2.3 22 50-71 1-22 (47)
4 d1wh7a_ a.4.1.1 (A:) ZF-HD hom 25.2 28 0.002 22.1 3.1 43 49-96 18-61 (80)
5 d1d3ga_ c.1.4.1 (A:) Dihydroor 21.6 9.8 0.00071 29.8 0.2 19 56-74 69-87 (367)
6 d1unda_ a.14.1.1 (A:) Advillin 19.2 16 0.0012 20.9 0.7 12 55-66 2-13 (36)
7 d1yu8x1 a.14.1.1 (X:42-76) Vil 18.4 17 0.0012 20.6 0.7 12 55-66 1-12 (35)
8 d1f54a_ a.39.1.5 (A:) Calmodul 17.7 31 0.0022 20.6 1.9 18 52-69 1-18 (77)
9 d2gmga1 a.4.5.82 (A:1-105) Hyp 17.5 21 0.0016 24.7 1.2 11 65-75 69-79 (105)
10 d2g9wa1 a.4.5.39 (A:3-124) Hyp 17.3 26 0.0019 23.4 1.6 41 28-68 65-118 (122)
No 1
>d1tv5a1 c.1.4.1 (A:158-566) Dihydroorotate dehydrogenase {Plasmodium falciparum [TaxId: 5833]}
Probab=32.75 E-value=4.4 Score=32.97 Aligned_cols=20 Identities=25% Similarity=0.424 Sum_probs=17.8
Q ss_pred ChhhHHHhhhhhhhcCCCCC
Q 031189 56 TDEDVDELKACIELGFGFDS 75 (164)
Q Consensus 56 TD~DleELKGc~DLGFgF~~ 75 (164)
.|-+-+.++++.+|||||=+
T Consensus 70 ~dk~~~~i~~~~~lGfG~ve 89 (409)
T d1tv5a1 70 FDKNGVCIDSILKLGFSFIE 89 (409)
T ss_dssp TTTTCSSHHHHHTTTCSEEE
T ss_pred cCCCHHHHHHHHhcCCCeEE
Confidence 77788999999999999964
No 2
>d1kx7a_ a.3.1.1 (A:) Mono-heme c-type cytochrome ScyA {Shewanella putrefaciens [TaxId: 24]}
Probab=29.01 E-value=40 Score=20.33 Aligned_cols=18 Identities=22% Similarity=0.209 Sum_probs=14.2
Q ss_pred CCCCCCChhhHHHhhhhh
Q 031189 50 KRSKSVTDEDVDELKACI 67 (164)
Q Consensus 50 rr~KSlTD~DleELKGc~ 67 (164)
.....|||+|+..|-.+|
T Consensus 60 g~~~~Lsd~ei~~v~~Yi 77 (81)
T d1kx7a_ 60 GMCTDCTDEDYKAAIEFM 77 (81)
T ss_dssp TTCSSCCHHHHHHHHHHH
T ss_pred ccccCCCHHHHHHHHHHH
Confidence 445689999999987665
No 3
>d1ijwc_ a.4.1.2 (C:) HIN recombinase (DNA-binding domain) {Synthetic}
Probab=28.70 E-value=17 Score=21.45 Aligned_cols=22 Identities=14% Similarity=0.448 Sum_probs=19.2
Q ss_pred CCCCCCChhhHHHhhhhhhhcC
Q 031189 50 KRSKSVTDEDVDELKACIELGF 71 (164)
Q Consensus 50 rr~KSlTD~DleELKGc~DLGF 71 (164)
+|.+.||++++++.+-.++-|.
T Consensus 1 GR~~~lt~~q~~~a~~l~~~G~ 22 (47)
T d1ijwc_ 1 GRPRAINKHEQEQISRLLEKGH 22 (47)
T ss_dssp CCCCSSCHHHHHHHHHHHHTTC
T ss_pred CCCCcCCHHHHHHHHHHHHCCC
Confidence 4678899999999999999873
No 4
>d1wh7a_ a.4.1.1 (A:) ZF-HD homeobox protein At4g24660 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=25.24 E-value=28 Score=22.09 Aligned_cols=43 Identities=19% Similarity=0.293 Sum_probs=27.9
Q ss_pred CCCCCCCChhhHHHhhhhhhh-cCCCCCCCCCCCccccchhhhhhhhhh
Q 031189 49 NKRSKSVTDEDVDELKACIEL-GFGFDSPAGPDQDAADQRLSDTLPALE 96 (164)
Q Consensus 49 ~rr~KSlTD~DleELKGc~DL-GFgF~~~~~~d~ed~~p~L~~tLPaL~ 96 (164)
+|..-.+|+..+++|+.+++- ++.-.. || .+....||..| ||.
T Consensus 18 kR~Rt~ft~~Q~~~L~~~fe~~~~~~~~---p~-~~~~~~la~~~-gl~ 61 (80)
T d1wh7a_ 18 KRFRTKFTAEQKEKMLAFAERLGWRIQK---HD-DVAVEQFCAET-GVR 61 (80)
T ss_dssp SCCCCCCCHHHHHHHHHHHHHHTSCCCS---ST-THHHHHHHHHS-CCC
T ss_pred CCccccCCHHHHHHHHHHHHHhcccccC---cC-HHHHHHHHHHH-CCC
Confidence 344557999999999999984 433332 22 35566677666 454
No 5
>d1d3ga_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.64 E-value=9.8 Score=29.82 Aligned_cols=19 Identities=26% Similarity=0.569 Sum_probs=16.1
Q ss_pred ChhhHHHhhhhhhhcCCCC
Q 031189 56 TDEDVDELKACIELGFGFD 74 (164)
Q Consensus 56 TD~DleELKGc~DLGFgF~ 74 (164)
+|.+-++++.+.++||||=
T Consensus 69 ~~~~~~~i~~~~~~G~G~v 87 (367)
T d1d3ga_ 69 FDKHGEAVDGLYKMGFGFV 87 (367)
T ss_dssp SSTTSSSHHHHHHHTCSEE
T ss_pred CCCCHHHHHHHhhcCCcEE
Confidence 4567789999999999984
No 6
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.23 E-value=16 Score=20.90 Aligned_cols=12 Identities=8% Similarity=0.216 Sum_probs=9.5
Q ss_pred CChhhHHHhhhh
Q 031189 55 VTDEDVDELKAC 66 (164)
Q Consensus 55 lTD~DleELKGc 66 (164)
|||+|+++|=|+
T Consensus 2 Lsd~dF~~vFgm 13 (36)
T d1unda_ 2 LSEQDFVSVFGI 13 (36)
T ss_dssp CCHHHHHHHHSS
T ss_pred CCHHHHHHHHCc
Confidence 789999988554
No 7
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=18.44 E-value=17 Score=20.62 Aligned_cols=12 Identities=25% Similarity=0.418 Sum_probs=9.3
Q ss_pred CChhhHHHhhhh
Q 031189 55 VTDEDVDELKAC 66 (164)
Q Consensus 55 lTD~DleELKGc 66 (164)
|||+|+++|=|+
T Consensus 1 Lsd~dF~~vfgm 12 (35)
T d1yu8x1 1 LSDEDFKAVFGM 12 (35)
T ss_dssp SCHHHHHHHHSS
T ss_pred CCHHHHHHHHCC
Confidence 688999888554
No 8
>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=17.68 E-value=31 Score=20.63 Aligned_cols=18 Identities=33% Similarity=0.589 Sum_probs=15.2
Q ss_pred CCCCChhhHHHhhhhhhh
Q 031189 52 SKSVTDEDVDELKACIEL 69 (164)
Q Consensus 52 ~KSlTD~DleELKGc~DL 69 (164)
+..||+++++|++-++..
T Consensus 1 ~~~lt~eqi~el~~~F~~ 18 (77)
T d1f54a_ 1 SSNLTEEQIAEFKEAFAL 18 (77)
T ss_dssp CCCCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH
Confidence 357999999999988887
No 9
>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}
Probab=17.52 E-value=21 Score=24.74 Aligned_cols=11 Identities=36% Similarity=0.833 Sum_probs=8.8
Q ss_pred hhhhhcCCCCC
Q 031189 65 ACIELGFGFDS 75 (164)
Q Consensus 65 Gc~DLGFgF~~ 75 (164)
-|.+-||+|..
T Consensus 69 ~CrkCGfvFr~ 79 (105)
T d2gmga1 69 QCRKCGFVFKA 79 (105)
T ss_dssp BBTTTCCBCCC
T ss_pred hhhhcCCeecc
Confidence 38899999963
No 10
>d2g9wa1 a.4.5.39 (A:3-124) Hypothetical protein Rv1846c {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=17.25 E-value=26 Score=23.41 Aligned_cols=41 Identities=20% Similarity=0.280 Sum_probs=26.5
Q ss_pred cCCCCccchHHHHHhhhcc-C-CC-----------CCCCCCChhhHHHhhhhhh
Q 031189 28 HSWSPDVYRDEAWLRRKGN-F-KN-----------KRSKSVTDEDVDELKACIE 68 (164)
Q Consensus 28 ~s~spd~~rdeaW~rrk~~-~-~~-----------rr~KSlTD~DleELKGc~D 68 (164)
+-++|=+.|++.-...-+. . +. .-...||++|++||+..+|
T Consensus 65 ~~Y~~~i~~e~~~~~~~~~~l~~~~~~gs~~~~~~~l~~~ls~~el~~L~~ll~ 118 (122)
T d2g9wa1 65 HRYAPVHGRDELVAGLMVDALAQAEDSGSRQAALVHFVERVGADEADALRRALA 118 (122)
T ss_dssp CEEEESSCHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred EEEEeCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 3466788888876443221 1 21 1125699999999999886
Done!