BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031190
(164 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357491621|ref|XP_003616098.1| Cbs domain protein [Medicago truncatula]
gi|355517433|gb|AES99056.1| Cbs domain protein [Medicago truncatula]
Length = 205
Score = 295 bits (754), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 137/159 (86%), Positives = 153/159 (96%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG ++SFLS+GN++K+AVLQR+R+VNP+L+PV SRFES + AR+EEHGFESTTISDIL
Sbjct: 38 MQGGLRSFLSNGNVIKNAVLQRVRMVNPLLQPVAFSRFESATPARIEEHGFESTTISDIL 97
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGKGADGSWLWCTTDDTVYDAVKSMTQ+NVGALVVVKPGE+KS+AGIITERDYLRKII
Sbjct: 98 KGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLRKII 157
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTG 159
VQGRSSKSTKVGDIMTEENKLITV+PDTKVLRAMQLMTG
Sbjct: 158 VQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTG 196
>gi|357491619|ref|XP_003616097.1| Cbs domain protein [Medicago truncatula]
gi|355517432|gb|AES99055.1| Cbs domain protein [Medicago truncatula]
Length = 254
Score = 291 bits (745), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 136/158 (86%), Positives = 152/158 (96%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG ++SFLS+GN++K+AVLQR+R+VNP+L+PV SRFES + AR+EEHGFESTTISDIL
Sbjct: 50 MQGGLRSFLSNGNVIKNAVLQRVRMVNPLLQPVAFSRFESATPARIEEHGFESTTISDIL 109
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGKGADGSWLWCTTDDTVYDAVKSMTQ+NVGALVVVKPGE+KS+AGIITERDYLRKII
Sbjct: 110 KGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLRKII 169
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
VQGRSSKSTKVGDIMTEENKLITV+PDTKVLRAMQLMT
Sbjct: 170 VQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMT 207
>gi|357491617|ref|XP_003616096.1| Cbs domain protein [Medicago truncatula]
gi|355517431|gb|AES99054.1| Cbs domain protein [Medicago truncatula]
Length = 242
Score = 291 bits (745), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 136/158 (86%), Positives = 152/158 (96%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG ++SFLS+GN++K+AVLQR+R+VNP+L+PV SRFES + AR+EEHGFESTTISDIL
Sbjct: 38 MQGGLRSFLSNGNVIKNAVLQRVRMVNPLLQPVAFSRFESATPARIEEHGFESTTISDIL 97
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGKGADGSWLWCTTDDTVYDAVKSMTQ+NVGALVVVKPGE+KS+AGIITERDYLRKII
Sbjct: 98 KGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLRKII 157
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
VQGRSSKSTKVGDIMTEENKLITV+PDTKVLRAMQLMT
Sbjct: 158 VQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMT 195
>gi|357491615|ref|XP_003616095.1| Cbs domain protein [Medicago truncatula]
gi|217073214|gb|ACJ84966.1| unknown [Medicago truncatula]
gi|355517430|gb|AES99053.1| Cbs domain protein [Medicago truncatula]
gi|388522955|gb|AFK49539.1| unknown [Medicago truncatula]
Length = 205
Score = 290 bits (743), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 136/158 (86%), Positives = 152/158 (96%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG ++SFLS+GN++K+AVLQR+R+VNP+L+PV SRFES + AR+EEHGFESTTISDIL
Sbjct: 1 MQGGLRSFLSNGNVIKNAVLQRVRMVNPLLQPVAFSRFESATPARIEEHGFESTTISDIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGKGADGSWLWCTTDDTVYDAVKSMTQ+NVGALVVVKPGE+KS+AGIITERDYLRKII
Sbjct: 61 KGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
VQGRSSKSTKVGDIMTEENKLITV+PDTKVLRAMQLMT
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMT 158
>gi|224127037|ref|XP_002319991.1| predicted protein [Populus trichocarpa]
gi|222858367|gb|EEE95914.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 134/158 (84%), Positives = 152/158 (96%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGA+++ L+HGN+VK ++LQ +R+++P+LRP+V SRFESVSSAR+EEHGFEST I+DIL
Sbjct: 1 MQGALRACLTHGNVVKDSLLQHVRVLSPLLRPIVFSRFESVSSARIEEHGFESTRIADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKS+AGIITERDYLRKII
Sbjct: 61 KEKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
VQGRSSKSTKVGDIMTEENKLITV+PDTKVL+AMQLMT
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVTPDTKVLKAMQLMT 158
>gi|351722175|ref|NP_001236211.1| uncharacterized protein LOC100527191 [Glycine max]
gi|255631750|gb|ACU16242.1| unknown [Glycine max]
Length = 205
Score = 284 bits (726), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 133/158 (84%), Positives = 149/158 (94%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG QSFLSHGN++++AVLQR+R+VNP+L+P+VSSRFESV+ AR+EEHGFESTTISDIL
Sbjct: 1 MQGGFQSFLSHGNVIRNAVLQRVRMVNPLLQPIVSSRFESVTPARIEEHGFESTTISDIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
KGKGADGSWLWCTTDDTVYDAVKSMTQ+NVGALVVVK K++AGIITERDYLRKII
Sbjct: 61 NDKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKSDANKAIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
VQGRSSKSTKVGDIMTEENKLITV+PDTKVL+AMQLMT
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVTPDTKVLQAMQLMT 158
>gi|225434277|ref|XP_002262902.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial
isoform 1 [Vitis vinifera]
gi|225434279|ref|XP_002262927.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial
isoform 2 [Vitis vinifera]
gi|225434281|ref|XP_002262956.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial
isoform 3 [Vitis vinifera]
Length = 205
Score = 282 bits (721), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 135/158 (85%), Positives = 149/158 (94%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGAIQ+ +SHG+IVK+AVL +IRLVNP++ VV SR +SV+SARMEEHGFESTTI+D+L
Sbjct: 1 MQGAIQAIVSHGSIVKNAVLHQIRLVNPIMPSVVFSRLQSVTSARMEEHGFESTTIADVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGK ADGSWLWCTTDD+VYDAVKSMT HNVGALVVVKPGEQKS+AGIITERDYLRKII
Sbjct: 61 KGKGKSADGSWLWCTTDDSVYDAVKSMTHHNVGALVVVKPGEQKSIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
VQGRSSKSTKVGDIMTEENKLITVSP+TKVLRAMQLMT
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVSPNTKVLRAMQLMT 158
>gi|297745725|emb|CBI15781.3| unnamed protein product [Vitis vinifera]
Length = 262
Score = 281 bits (719), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 135/158 (85%), Positives = 149/158 (94%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGAIQ+ +SHG+IVK+AVL +IRLVNP++ VV SR +SV+SARMEEHGFESTTI+D+L
Sbjct: 58 MQGAIQAIVSHGSIVKNAVLHQIRLVNPIMPSVVFSRLQSVTSARMEEHGFESTTIADVL 117
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGK ADGSWLWCTTDD+VYDAVKSMT HNVGALVVVKPGEQKS+AGIITERDYLRKII
Sbjct: 118 KGKGKSADGSWLWCTTDDSVYDAVKSMTHHNVGALVVVKPGEQKSIAGIITERDYLRKII 177
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
VQGRSSKSTKVGDIMTEENKLITVSP+TKVLRAMQLMT
Sbjct: 178 VQGRSSKSTKVGDIMTEENKLITVSPNTKVLRAMQLMT 215
>gi|388511535|gb|AFK43829.1| unknown [Lotus japonicus]
Length = 205
Score = 278 bits (712), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 129/158 (81%), Positives = 150/158 (94%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG +++ S GN++K+AVLQ++R+VNP+L+PV SR+ESVS AR+EEHGFESTTI+DIL
Sbjct: 1 MQGGMRAIFSRGNVIKNAVLQQVRMVNPLLKPVAFSRYESVSPARIEEHGFESTTIADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
KAKGKGADGSWLWCTT+DTVY+AVKSMTQ+NVGALVVVKP E+KS+AGIITERDYLRKII
Sbjct: 61 KAKGKGADGSWLWCTTEDTVYEAVKSMTQNNVGALVVVKPAEEKSIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
VQGRSSKSTKVGDIMTEENKLITV+PDT+VLRAMQLMT
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVTPDTRVLRAMQLMT 158
>gi|351727132|ref|NP_001237662.1| uncharacterized protein LOC100306364 [Glycine max]
gi|255628307|gb|ACU14498.1| unknown [Glycine max]
Length = 206
Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/162 (79%), Positives = 149/162 (91%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG ++SFLSHGN++++AVLQR+R+VNP+L+ + SSRFESV+ AR+EEHGFESTTISDIL
Sbjct: 1 MQGGMRSFLSHGNVIRNAVLQRVRMVNPLLQTIASSRFESVTPARIEEHGFESTTISDIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
KGKGADGSWLWCTTDDTVYDAVKSMTQ+NVGALVVVK K++ GIITERDYLRKII
Sbjct: 61 NDKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKSDANKAITGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
VQGRSSKSTKVGDIMTEENKLITV+PDTKVL+AMQLMT + +
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVTPDTKVLQAMQLMTDNRI 162
>gi|449444316|ref|XP_004139921.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
isoform 1 [Cucumis sativus]
gi|449444318|ref|XP_004139922.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
isoform 2 [Cucumis sativus]
Length = 206
Score = 275 bits (704), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 132/159 (83%), Positives = 146/159 (91%), Gaps = 1/159 (0%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFE-SVSSARMEEHGFESTTISDI 59
MQGA++SFLSHGN+VK+AVLQ+IR+ NP +RP + SRF S SSA +EEHGFESTTI DI
Sbjct: 1 MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSANIEEHGFESTTIDDI 60
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
LKAKGK ADGSWLWCTT+D+VYDAV+SMTQHNVGALVVVKP EQ S+AGIITERDYLRKI
Sbjct: 61 LKAKGKSADGSWLWCTTEDSVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLRKI 120
Query: 120 IVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
IVQGRSSKSTKVGDIMTEENKLITV+PDTKVL AMQLMT
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPDTKVLLAMQLMT 159
>gi|255570875|ref|XP_002526389.1| conserved hypothetical protein [Ricinus communis]
gi|223534251|gb|EEF35965.1| conserved hypothetical protein [Ricinus communis]
Length = 206
Score = 275 bits (702), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 133/159 (83%), Positives = 145/159 (91%), Gaps = 1/159 (0%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLV-NPMLRPVVSSRFESVSSARMEEHGFESTTISDI 59
M A+ +FLS GN++K+AVLQ R+V NP LRP+V SRFESVSSARMEE FESTTI+D+
Sbjct: 1 MNRAVNAFLSRGNLIKNAVLQHARVVANPGLRPIVFSRFESVSSARMEEQSFESTTIADV 60
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
LK KGK ADGSWLWCTT+DTVYDAVKSMT HNVGALVVVKPGEQKS+AGIITERDYLRKI
Sbjct: 61 LKGKGKSADGSWLWCTTEDTVYDAVKSMTHHNVGALVVVKPGEQKSIAGIITERDYLRKI 120
Query: 120 IVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
IVQGRSSKSTKVGDIMTEENKLITV+PDTKVLRAMQLMT
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMT 159
>gi|346465295|gb|AEO32492.1| hypothetical protein [Amblyomma maculatum]
Length = 159
Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 130/157 (82%), Positives = 145/157 (92%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGAIQ+ SHGN+++ AVL+ +R++NP +RP + SR ESVSSAR+EEHGFESTTISDI+
Sbjct: 1 MQGAIQAIQSHGNVLRHAVLRHVRVLNPTMRPTIFSRSESVSSARLEEHGFESTTISDIM 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGK ADGSWLWCTT+DTVYDAVKSMTQHNVGALVVVKP +KSVAGIITERDYLRKII
Sbjct: 61 KLKGKSADGSWLWCTTEDTVYDAVKSMTQHNVGALVVVKPDGEKSVAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
VQGRSSKSTKVGDIMTEENKLITV+PDTKVLRAMQLM
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLM 157
>gi|449475831|ref|XP_004154564.1| PREDICTED: LOW QUALITY PROTEIN: CBS domain-containing protein
CBSX3, mitochondrial-like [Cucumis sativus]
Length = 206
Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/159 (82%), Positives = 145/159 (91%), Gaps = 1/159 (0%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFE-SVSSARMEEHGFESTTISDI 59
MQGA++SFLSHGN+VK+AVLQ+IR+ NP +RP + SRF S SSA +EEHGFES TI DI
Sbjct: 1 MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSANIEEHGFESXTIDDI 60
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
LKAKGK ADGSWLWCTT+D+VYDAV+SMTQHNVGALVVVKP EQ S+AGIITERDYLRKI
Sbjct: 61 LKAKGKSADGSWLWCTTEDSVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLRKI 120
Query: 120 IVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
IVQGRSSKSTKVGDIMTEENKLITV+PDTKVL AMQLMT
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPDTKVLLAMQLMT 159
>gi|224117650|ref|XP_002331597.1| predicted protein [Populus trichocarpa]
gi|222873993|gb|EEF11124.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 269 bits (688), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/158 (81%), Positives = 146/158 (92%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGA+++FL+HGN+VK ++ Q +R+ +P+LRPVV SRFESVSSA +EE GFESTTI+DIL
Sbjct: 1 MQGALRTFLTHGNVVKDSLFQHLRVSSPVLRPVVFSRFESVSSAPIEETGFESTTIADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGK ADGSWLWCTTDDTVYDAVKSMT HNVGALVVVK GEQ+S+AGIITERDYLRKII
Sbjct: 61 KEKGKNADGSWLWCTTDDTVYDAVKSMTHHNVGALVVVKHGEQESIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
VQGRSSKSTKVGDIMTEENKLITV+ DTKVL+AMQLMT
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVAHDTKVLKAMQLMT 158
>gi|15238284|ref|NP_196647.1| CBS domain-containing protein [Arabidopsis thaliana]
gi|20455364|sp|Q9LEV3.1|CBSX3_ARATH RecName: Full=CBS domain-containing protein CBSX3, mitochondrial;
Flags: Precursor
gi|13605728|gb|AAK32857.1|AF361845_1 AT5g10860/T30N20_130 [Arabidopsis thaliana]
gi|8979720|emb|CAB96841.1| putative protein [Arabidopsis thaliana]
gi|17978887|gb|AAL47413.1| AT5g10860/T30N20_130 [Arabidopsis thaliana]
gi|332004220|gb|AED91603.1| CBS domain-containing protein [Arabidopsis thaliana]
Length = 206
Score = 266 bits (680), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/159 (80%), Positives = 145/159 (91%), Gaps = 1/159 (0%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRP-VVSSRFESVSSARMEEHGFESTTISDI 59
MQG I+SF+S GN+VK +VLQ +R++NP ++P V SR ES ARMEE GFESTTISD+
Sbjct: 1 MQGVIRSFVSGGNVVKGSVLQHLRVINPAIQPSVFCSRSESTQPARMEESGFESTTISDV 60
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
+K+KGK ADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ+++AGIITERDYLRKI
Sbjct: 61 MKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQALAGIITERDYLRKI 120
Query: 120 IVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
IVQGRSSKSTKVGDIMTEENKLITV+P+TKVLRAMQLMT
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMT 159
>gi|118162023|gb|ABK64186.1| CBS domain-containing protein [Solenostemon scutellarioides]
Length = 202
Score = 265 bits (678), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 129/158 (81%), Positives = 142/158 (89%), Gaps = 3/158 (1%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG IQ+ S G K+AVLQ +R+V P +R ++ R ES S+ARMEEHGFESTTISD+L
Sbjct: 1 MQGGIQAIFSRG---KNAVLQHVRVVPPAMRALMFPRHESTSAARMEEHGFESTTISDVL 57
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
AKGKGADGSWLWCTTDD+VYDAVKSMTQHNVGALVVVKPGEQKS+AGIITERDYLRKII
Sbjct: 58 TAKGKGADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGEQKSIAGIITERDYLRKII 117
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
VQGRSSKSTKVGDIMTEENKLITV+PDTKVL+AMQLMT
Sbjct: 118 VQGRSSKSTKVGDIMTEENKLITVTPDTKVLKAMQLMT 155
>gi|47027028|gb|AAT08729.1| CBS1 [Hyacinthus orientalis]
Length = 203
Score = 261 bits (667), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 122/147 (82%), Positives = 138/147 (93%)
Query: 12 GNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDILKAKGKGADGSW 71
GN+++ AVLQ +R++NP RPV+ SR ESVSSAR+EEHGFESTT+SD+LK+KGK ADGSW
Sbjct: 10 GNVLRRAVLQHVRVINPAFRPVIFSRSESVSSARLEEHGFESTTVSDVLKSKGKSADGSW 69
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
LWCTTDD+VYDAVKSMTQHNVGALVVVKPGE+K +AGIITERDYLRKIIVQGRSSKSTKV
Sbjct: 70 LWCTTDDSVYDAVKSMTQHNVGALVVVKPGEEKDIAGIITERDYLRKIIVQGRSSKSTKV 129
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMT 158
GDIMTEENKLITV+P TKVL+AMQLMT
Sbjct: 130 GDIMTEENKLITVTPGTKVLQAMQLMT 156
>gi|297811195|ref|XP_002873481.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297319318|gb|EFH49740.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 206
Score = 260 bits (665), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 125/159 (78%), Positives = 143/159 (89%), Gaps = 1/159 (0%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRP-VVSSRFESVSSARMEEHGFESTTISDI 59
MQ ++S +S GN+VK++VLQ +R++NP ++P V SR ES ARMEE GFESTTISD+
Sbjct: 1 MQAVVRSLVSGGNVVKASVLQHLRVINPAIQPSVFCSRSESTQPARMEETGFESTTISDV 60
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
+K+KGK ADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ+ +AGIITERDYLRKI
Sbjct: 61 MKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQVLAGIITERDYLRKI 120
Query: 120 IVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
IVQGRSSKSTKVGDIMTEENKLITV+P+TKVLRAMQLMT
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMT 159
>gi|257209009|emb|CBB36473.1| Arabidopsis protein targeted to mitochondria proteins At5g10860
[Saccharum hybrid cultivar R570]
Length = 205
Score = 258 bits (658), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 123/158 (77%), Positives = 140/158 (88%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ A+Q+ SHGN++K AVLQ I P + P V SRF SVSSAR+E+ GFE+ T+SD+L
Sbjct: 1 MQRAVQAVRSHGNVLKYAVLQHISAPKPAMLPAVFSRFMSVSSARLEDSGFETATVSDVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTT+DTVYDAVKSMTQHNVGALVVVKPGE KS+AGI+TERDYLRKII
Sbjct: 61 KSKGKSADGSWLWCTTEDTVYDAVKSMTQHNVGALVVVKPGEDKSIAGIVTERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
VQGRSSKSTKVGDIMTEENKLITV+P+TKVL+AMQLMT
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVNPNTKVLQAMQLMT 158
>gi|116782877|gb|ABK22702.1| unknown [Picea sitchensis]
Length = 205
Score = 256 bits (653), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 122/158 (77%), Positives = 139/158 (87%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGA++S HG I K+++LQ +R+ P R + +R ESVS AR+EEHGFESTTI+DIL
Sbjct: 1 MQGALRSIQLHGGIFKNSILQHLRVAEPSFRSKIIARHESVSPARLEEHGFESTTIADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGK ADGSWLWCTTDDTVYDAVKSMTQHNVGAL+VVKP E+KS+AGIITERDYLRKII
Sbjct: 61 KGKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALLVVKPVEEKSIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
VQGRSSK+TKVGDIMTEENKLITV+ DTKVL+AMQLMT
Sbjct: 121 VQGRSSKTTKVGDIMTEENKLITVTSDTKVLKAMQLMT 158
>gi|226490863|ref|NP_001150216.1| CBS domain protein [Zea mays]
gi|194708182|gb|ACF88175.1| unknown [Zea mays]
gi|195613652|gb|ACG28656.1| CBS domain protein [Zea mays]
gi|195637616|gb|ACG38276.1| CBS domain protein [Zea mays]
gi|414872655|tpg|DAA51212.1| TPA: CBS domain protein isoform 1 [Zea mays]
gi|414872656|tpg|DAA51213.1| TPA: CBS domain protein isoform 2 [Zea mays]
gi|414872657|tpg|DAA51214.1| TPA: CBS domain protein isoform 3 [Zea mays]
Length = 205
Score = 254 bits (650), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 120/158 (75%), Positives = 139/158 (87%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ A+Q+ SHGN++K AVLQ I P + P SRF SVSSAR+E+ GFE+ T++D+L
Sbjct: 1 MQRAVQAVRSHGNVLKYAVLQHISAPKPAMLPAAFSRFMSVSSARLEDRGFETATVADVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTT+D+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKII
Sbjct: 61 KSKGKSADGSWLWCTTEDSVYDAVKSMTQHNVGALVVVKPGQNKSIAGIVTERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
VQGRSSKSTKVGDIMTEENKLITV+PDTKVL+AMQLMT
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVNPDTKVLQAMQLMT 158
>gi|257209020|emb|CBB36496.1| Arabidopsis protein targeted to mitochondria proteins At5g10860
[Saccharum hybrid cultivar R570]
Length = 205
Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/158 (76%), Positives = 139/158 (87%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ A+Q+ SHG+++K AVLQ I P + P V SRF S SSAR+E+ GFE+ T+SD+L
Sbjct: 1 MQRAVQAVRSHGSVLKYAVLQHISAPKPAMLPAVFSRFMSASSARLEDSGFETATVSDVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTT+DTVYDAVKSMTQHNVGALVVVKPGE KS+AGI+TERDYLRKII
Sbjct: 61 KSKGKSADGSWLWCTTEDTVYDAVKSMTQHNVGALVVVKPGEDKSIAGIVTERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
VQGRSSKSTKVGDIMTEENKLITV+P+TKVL+AMQLMT
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVNPNTKVLQAMQLMT 158
>gi|357116495|ref|XP_003560016.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Brachypodium distachyon]
Length = 205
Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/158 (77%), Positives = 140/158 (88%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ AIQ+ SHG+++KSAVLQ + + P + P V SR SVSSA++EE GFES T++DIL
Sbjct: 1 MQRAIQAIGSHGSMLKSAVLQHVSVAKPAMLPAVFSRSMSVSSAQIEESGFESGTVADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTT+DTVYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKII
Sbjct: 61 KSKGKSADGSWLWCTTEDTVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
VQGRSSKSTKVGDIMTEENKLITV PDT+VL+AMQLMT
Sbjct: 121 VQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMT 158
>gi|116781417|gb|ABK22092.1| unknown [Picea sitchensis]
Length = 205
Score = 252 bits (643), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 121/158 (76%), Positives = 138/158 (87%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGA++S HG I K+++LQ +R+ P R + +R ESVS AR+EE GFESTTI+DIL
Sbjct: 1 MQGALRSIQLHGGIFKNSILQHLRVAEPSFRSKIIARHESVSPARLEESGFESTTIADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGK ADGSWLWCTTDDTVYDAVKSMTQHNVGAL+VVKP E+KS+AGIITERDYLRKII
Sbjct: 61 KGKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALLVVKPVEEKSIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
VQGRSSK+TKVGDIMTEENKLITV+ DTKVL+AMQLMT
Sbjct: 121 VQGRSSKTTKVGDIMTEENKLITVTSDTKVLKAMQLMT 158
>gi|224285803|gb|ACN40616.1| unknown [Picea sitchensis]
Length = 205
Score = 250 bits (638), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/158 (75%), Positives = 138/158 (87%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGA++S HG I K+++LQ +R+ P R + +R ESVS AR+EE GFESTTI+DIL
Sbjct: 1 MQGALRSIQLHGGIFKNSILQHLRVAEPSFRSKIIARHESVSPARLEESGFESTTIADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGK ADGSWLWCTTDDTVYDAVKSMTQH+VGAL+VVKP E+KS+AGIITERDYLRKII
Sbjct: 61 KGKGKSADGSWLWCTTDDTVYDAVKSMTQHDVGALLVVKPVEEKSIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
VQGRSSK+TKVGDIMTEENKLITV+ DTKVL+AMQLMT
Sbjct: 121 VQGRSSKTTKVGDIMTEENKLITVTSDTKVLKAMQLMT 158
>gi|222625756|gb|EEE59888.1| hypothetical protein OsJ_12490 [Oryza sativa Japonica Group]
Length = 867
Score = 249 bits (635), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 120/158 (75%), Positives = 139/158 (87%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ AIQ+ SHG+++KSAVL+ I P + P V SR SVSSA++EE GFE+ T++DIL
Sbjct: 663 MQRAIQAIGSHGSLLKSAVLRHISAPKPSILPAVYSRSMSVSSAQIEESGFETATVADIL 722
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTTDD+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKII
Sbjct: 723 KSKGKSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKII 782
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
VQGRSSKSTKVGDIMTEEN+LITV PDT+VL+AMQLMT
Sbjct: 783 VQGRSSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMT 820
>gi|125545649|gb|EAY91788.1| hypothetical protein OsI_13431 [Oryza sativa Indica Group]
Length = 233
Score = 248 bits (634), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 120/158 (75%), Positives = 139/158 (87%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ AIQ+ SHG+++KSAVL+ I P + P V SR SVSSA++EE GFE+ T++DIL
Sbjct: 29 MQRAIQAIGSHGSLLKSAVLRHISAPKPSILPAVYSRSMSVSSAQIEESGFETATVADIL 88
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTTDD+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKII
Sbjct: 89 KSKGKSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKII 148
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
VQGRSSKSTKVGDIMTEEN+LITV PDT+VL+AMQLMT
Sbjct: 149 VQGRSSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMT 186
>gi|115455195|ref|NP_001051198.1| Os03g0737000 [Oryza sativa Japonica Group]
gi|29788876|gb|AAP03422.1| unknown protein [Oryza sativa Japonica Group]
gi|32352166|dbj|BAC78576.1| hypothetical protein [Oryza sativa Japonica Group]
gi|37999993|gb|AAR07080.1| unknown protein [Oryza sativa Japonica Group]
gi|108710961|gb|ABF98756.1| CBS domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|108710962|gb|ABF98757.1| CBS domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|108710963|gb|ABF98758.1| CBS domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113549669|dbj|BAF13112.1| Os03g0737000 [Oryza sativa Japonica Group]
gi|215692663|dbj|BAG88083.1| unnamed protein product [Oryza sativa Japonica Group]
gi|301087459|gb|ADK60921.1| CBSX4 [Oryza sativa Indica Group]
Length = 205
Score = 248 bits (634), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 120/158 (75%), Positives = 139/158 (87%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ AIQ+ SHG+++KSAVL+ I P + P V SR SVSSA++EE GFE+ T++DIL
Sbjct: 1 MQRAIQAIGSHGSLLKSAVLRHISAPKPSILPAVYSRSMSVSSAQIEESGFETATVADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTTDD+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKII
Sbjct: 61 KSKGKSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
VQGRSSKSTKVGDIMTEEN+LITV PDT+VL+AMQLMT
Sbjct: 121 VQGRSSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMT 158
>gi|108710960|gb|ABF98755.1| CBS domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 230
Score = 248 bits (633), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 120/158 (75%), Positives = 139/158 (87%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ AIQ+ SHG+++KSAVL+ I P + P V SR SVSSA++EE GFE+ T++DIL
Sbjct: 26 MQRAIQAIGSHGSLLKSAVLRHISAPKPSILPAVYSRSMSVSSAQIEESGFETATVADIL 85
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTTDD+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKII
Sbjct: 86 KSKGKSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKII 145
Query: 121 VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
VQGRSSKSTKVGDIMTEEN+LITV PDT+VL+AMQLMT
Sbjct: 146 VQGRSSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMT 183
>gi|167999412|ref|XP_001752411.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696311|gb|EDQ82650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 208
Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 108/165 (65%), Positives = 129/165 (78%), Gaps = 3/165 (1%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSAR---MEEHGFESTTIS 57
MQG ++ + G + VLQ +R+ +R+ES + +EEHGFESTTIS
Sbjct: 1 MQGLVRLVQAQGKALPGIVLQHVRVGGSGFGSGFQTRWESGQAKAKEGLEEHGFESTTIS 60
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
DILK KG+ ADGSWLWC+ DDTVYDAVKSMT +NVGAL+VVK G +K++AGIITERDYLR
Sbjct: 61 DILKEKGRNADGSWLWCSVDDTVYDAVKSMTANNVGALLVVKSGTEKTLAGIITERDYLR 120
Query: 118 KIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
KIIVQGRSSK+TKVGDIMTEENKLITVSPDTKVLRAM+LMT + +
Sbjct: 121 KIIVQGRSSKTTKVGDIMTEENKLITVSPDTKVLRAMELMTNNRI 165
>gi|53771902|gb|AAU93534.1| unknown protein [Zea mays]
gi|414872653|tpg|DAA51210.1| TPA: putative uncharacterized protein adh1F [Zea mays]
Length = 286
Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 119/239 (49%), Positives = 138/239 (57%), Gaps = 81/239 (33%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ A+Q+ SHGN++K AVLQ I P + P SRF SVSSAR+E+ GFE+ T++D+L
Sbjct: 1 MQRAVQAVRSHGNVLKYAVLQHISAPKPAMLPAAFSRFMSVSSARLEDRGFETATVADVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKS---------------------------------M 87
K+KGK ADGSWLWCTT+D+VYDAVKS M
Sbjct: 61 KSKGKSADGSWLWCTTEDSVYDAVKSVCPHFPMIVLTPSESMVMHQMIRLPFGTLNFLQM 120
Query: 88 TQHNVGALVVVKPGEQKSVAGIITERD--------------------------------- 114
TQHNVGALVVVKPG+ KS+AGI+TER
Sbjct: 121 TQHNVGALVVVKPGQNKSIAGIVTERGDEQISVLLASNFWPVAVHHSTFGIKESQLFRAL 180
Query: 115 ---------------YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
YLRKIIVQGRSSKSTKVGDIMTEENKLITV+PDTKVL+AMQLMT
Sbjct: 181 YSRYNRNCIKLKYTYYLRKIIVQGRSSKSTKVGDIMTEENKLITVNPDTKVLQAMQLMT 239
>gi|168007993|ref|XP_001756692.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692288|gb|EDQ78646.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 208
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/149 (68%), Positives = 119/149 (79%), Gaps = 3/149 (2%)
Query: 13 NIVKSAVLQRIRLVNPMLRPVVSSRFE---SVSSARMEEHGFESTTISDILKAKGKGADG 69
+++ VLQ +R+ +R E + + +EEHGFESTTI+DILK KG+ ADG
Sbjct: 13 SVLSRCVLQHVRVGGGAFSFGSQTRKETGQATTKESLEEHGFESTTIADILKEKGQQADG 72
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
SWLWC+ DDTVYDAVKSMT HNVGAL+VVK G +K +AGIITERDYLRKIIVQGRSSK+T
Sbjct: 73 SWLWCSVDDTVYDAVKSMTAHNVGALLVVKSGAEKKLAGIITERDYLRKIIVQGRSSKTT 132
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMT 158
KVGDIMTEENKLITV PDTKVLRAM+LMT
Sbjct: 133 KVGDIMTEENKLITVKPDTKVLRAMELMT 161
>gi|302785239|ref|XP_002974391.1| hypothetical protein SELMODRAFT_101308 [Selaginella moellendorffii]
gi|300157989|gb|EFJ24613.1| hypothetical protein SELMODRAFT_101308 [Selaginella moellendorffii]
Length = 236
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/160 (63%), Positives = 127/160 (79%), Gaps = 3/160 (1%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFES--VSSARMEEHGFESTTISD 58
MQ + + G + + +L+ +R+ R + R+ES + +EEHGFESTTI D
Sbjct: 1 MQSVAGALRAQGRVAQQGILKHLRVAATNDRFQLP-RWESSVAKPSSLEEHGFESTTIED 59
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
ILKAKGK ADGSWL+C+TDDTVY+AV+SMT HNVGAL+VVK GE+ ++AGIITERDYLRK
Sbjct: 60 ILKAKGKSADGSWLFCSTDDTVYEAVRSMTTHNVGALLVVKKGEKGAIAGIITERDYLRK 119
Query: 119 IIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
IIVQGRSSK+TKVGDIMTEENKLITV+P T+VL+AM+LMT
Sbjct: 120 IIVQGRSSKTTKVGDIMTEENKLITVTPSTRVLQAMELMT 159
>gi|302807987|ref|XP_002985688.1| hypothetical protein SELMODRAFT_122545 [Selaginella moellendorffii]
gi|300146597|gb|EFJ13266.1| hypothetical protein SELMODRAFT_122545 [Selaginella moellendorffii]
Length = 236
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 101/160 (63%), Positives = 126/160 (78%), Gaps = 3/160 (1%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFES--VSSARMEEHGFESTTISD 58
MQ + + G + + +L+ +R+ R + R+ES + +EEHGFESTTI D
Sbjct: 1 MQSVAGALRAQGRVAQQGILKHLRVAATNDRFQLP-RWESSVAKPSSLEEHGFESTTIED 59
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
ILK KGK ADGSWL+C+TDDTVY+AV+SMT HNVGAL+VVK GE+ ++AGIITERDYLRK
Sbjct: 60 ILKGKGKSADGSWLFCSTDDTVYEAVRSMTTHNVGALLVVKKGEKGAIAGIITERDYLRK 119
Query: 119 IIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
IIVQGRSSK+TKVGDIMTEENKLITV+P T+VL+AM+LMT
Sbjct: 120 IIVQGRSSKTTKVGDIMTEENKLITVTPSTRVLQAMELMT 159
>gi|357491601|ref|XP_003616088.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517423|gb|AES99046.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 494
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/133 (67%), Positives = 110/133 (82%), Gaps = 2/133 (1%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG ++SFLS N++K+AVLQR+ +VNP+L+PV SRFES + AR+EEHGFESTTISDIL
Sbjct: 1 MQGGLRSFLSDRNVIKNAVLQRVCMVNPLLQPVAFSRFESATPARIEEHGFESTTISDIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
+ KGKGADGS LWCTTDDTVYDAVKSMTQ+N GALVVVKPGE+KS+AGIITER+ K++
Sbjct: 61 QGKGKGADGSRLWCTTDDTVYDAVKSMTQNNAGALVVVKPGEEKSIAGIITERE--DKVV 118
Query: 121 VQGRSSKSTKVGD 133
+ R + D
Sbjct: 119 INWRRKRKLSFSD 131
>gi|18266206|gb|AAL67493.1|AF459408_1 senescence-associated putative protein, partial [Narcissus
pseudonarcissus]
Length = 109
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 83/109 (76%), Positives = 99/109 (90%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGAIQ+ LS GN++K AVLQ +R++NP L+P + SR ESVSSA++EEHGFESTT+SD+L
Sbjct: 1 MQGAIQAILSRGNVLKRAVLQHVRIINPALQPSILSRSESVSSAQLEEHGFESTTVSDVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGI 109
K+KGK ADGSWLWCTT+DTVYDAVKSMTQHNVGALVVVKPGE+K +AGI
Sbjct: 61 KSKGKSADGSWLWCTTEDTVYDAVKSMTQHNVGALVVVKPGEEKGIAGI 109
>gi|149392803|gb|ABR26204.1| cbs domain protein [Oryza sativa Indica Group]
Length = 143
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/96 (88%), Positives = 93/96 (96%)
Query: 63 KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122
+GK ADGSWLWCTTDD+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKIIVQ
Sbjct: 1 RGKSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKIIVQ 60
Query: 123 GRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
GRSSKSTKVGDIMTEEN+LITV PDT+VL+AMQLMT
Sbjct: 61 GRSSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMT 96
>gi|149392473|gb|ABR26039.1| cbs domain protein [Oryza sativa Indica Group]
Length = 141
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/94 (89%), Positives = 91/94 (96%)
Query: 65 KGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124
K ADGSWLWCTTDD+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKIIVQGR
Sbjct: 1 KSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKIIVQGR 60
Query: 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
SSKSTKVGDIMTEEN+LITV PDT+VL+AMQLMT
Sbjct: 61 SSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMT 94
>gi|225458255|ref|XP_002281327.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial
[Vitis vinifera]
Length = 207
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 118/164 (71%), Gaps = 2/164 (1%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSAR--MEEHGFESTTISD 58
MQG ++ S +K A+LQ + R V SR E V+++ ME+ G E+TT+++
Sbjct: 1 MQGIGRATRSCQETLKLAILQHCHGRSTAGRKNVFSRHECVTTSNPTMEQKGLENTTVAE 60
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
+L KG+ GSWLWC T+DTVYDA K M ++N+G+LVV+KPGE K +AGI TERDY+RK
Sbjct: 61 VLMTKGEEKSGSWLWCRTNDTVYDAAKHMAENNIGSLVVLKPGEPKHIAGIFTERDYMRK 120
Query: 119 IIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
II GRSSK TKVG+IMT+ENKL+TVS DT +L+AMQL+T + +
Sbjct: 121 IIAHGRSSKDTKVGEIMTDENKLVTVSSDTNILQAMQLLTEYQI 164
>gi|224085680|ref|XP_002307661.1| predicted protein [Populus trichocarpa]
gi|222857110|gb|EEE94657.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 119/161 (73%), Gaps = 6/161 (3%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESV-SSARMEEHGFESTTISDI 59
M+G ++ S ++ A+L+ +P R + SRF V SS + E G E+ T++D+
Sbjct: 1 MEGLVRGIRSCQETLRVAILK-----HPRDRREIFSRFGRVTSSLPVREKGLENLTVADV 55
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
L KG+ GSWLWC T D+VYDAV++M ++N+G+LVV+KPGEQ+ +AGIITERDY+RKI
Sbjct: 56 LMTKGEDKIGSWLWCRTTDSVYDAVENMAKNNIGSLVVLKPGEQELIAGIITERDYMRKI 115
Query: 120 IVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
I QGRSSK T+VG+IMT+E+KL+TV+ DT +L+AMQLMT H
Sbjct: 116 IAQGRSSKYTRVGEIMTDEDKLVTVTSDTSILQAMQLMTDH 156
>gi|238007630|gb|ACR34850.1| unknown [Zea mays]
gi|414872654|tpg|DAA51211.1| TPA: hypothetical protein ZEAMMB73_541993 [Zea mays]
Length = 150
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 77/113 (68%), Positives = 94/113 (83%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ A+Q+ SHGN++K AVLQ I P + P SRF SVSSAR+E+ GFE+ T++D+L
Sbjct: 1 MQRAVQAVRSHGNVLKYAVLQHISAPKPAMLPAAFSRFMSVSSARLEDRGFETATVADVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
K+KGK ADGSWLWCTT+D+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TER
Sbjct: 61 KSKGKSADGSWLWCTTEDSVYDAVKSMTQHNVGALVVVKPGQNKSIAGIVTER 113
>gi|255538678|ref|XP_002510404.1| conserved hypothetical protein [Ricinus communis]
gi|223551105|gb|EEF52591.1| conserved hypothetical protein [Ricinus communis]
Length = 205
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 112/163 (68%), Gaps = 2/163 (1%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESV-SSARMEEHGFESTTISDI 59
MQG I+ S I+K + R + SRF V SS + + G E+ T++D+
Sbjct: 1 MQGLIRGVRSCKEILKIGTQRHSHGKEIFERKNIFSRFGCVTSSPSLPQKGLENLTVADV 60
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
L KG GSWLWC ++DTVYDAVK+M ++N+G+L+V+KPGE K +AGIITERDYLRK+
Sbjct: 61 LMTKGDEKTGSWLWCHSNDTVYDAVKNMAENNIGSLLVLKPGE-KHLAGIITERDYLRKV 119
Query: 120 IVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
I +GRS T+V +IMT+EN+L+TV+ DT +LRAMQLMT H +
Sbjct: 120 IAEGRSCHYTRVAEIMTDENRLVTVTSDTTILRAMQLMTDHHI 162
>gi|224062121|ref|XP_002300765.1| predicted protein [Populus trichocarpa]
gi|222842491|gb|EEE80038.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/164 (51%), Positives = 115/164 (70%), Gaps = 13/164 (7%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSR------FESVSSARMEEHGFEST 54
MQG +Q S ++ A+L+ +P +R ++ R SS + E G E+
Sbjct: 1 MQGLVQGVRSCQETLRVAILR-----HPHVRDIIERRKILSHSGCVTSSPPVGEKGLENL 55
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++D+L KG+ GSWLWC T DTVYDAVK+M Q+N+G+LVV+ GE++ +AGIITERD
Sbjct: 56 TVADVLVTKGEEKLGSWLWCRTTDTVYDAVKNMAQNNIGSLVVL--GERELIAGIITERD 113
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
YLRKII QGRSSK T+VG+IMT+ENKLITV+ DT +L+AM+LMT
Sbjct: 114 YLRKIIAQGRSSKYTRVGEIMTDENKLITVASDTNILQAMKLMT 157
>gi|357491603|ref|XP_003616089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517424|gb|AES99047.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 552
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 73/89 (82%), Positives = 82/89 (92%)
Query: 25 LVNPMLRPVVSSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAV 84
+VNP+L+PV SRFES + AR+EEHGFESTTISDIL+ KGKGADGS LWCTTDDTVYDAV
Sbjct: 1 MVNPLLQPVAFSRFESATPARIEEHGFESTTISDILQGKGKGADGSRLWCTTDDTVYDAV 60
Query: 85 KSMTQHNVGALVVVKPGEQKSVAGIITER 113
KSMTQ+N GALVVVKPGE+KS+AGIITER
Sbjct: 61 KSMTQNNAGALVVVKPGEEKSIAGIITER 89
>gi|414872652|tpg|DAA51209.1| TPA: hypothetical protein ZEAMMB73_541993 [Zea mays]
Length = 196
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/146 (52%), Positives = 94/146 (64%), Gaps = 33/146 (22%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ A+Q+ SHGN++K AVLQ I P + P SRF SVSSAR+E+ GFE+ T++D+L
Sbjct: 1 MQRAVQAVRSHGNVLKYAVLQHISAPKPAMLPAAFSRFMSVSSARLEDRGFETATVADVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKS---------------------------------M 87
K+KGK ADGSWLWCTT+D+VYDAVKS M
Sbjct: 61 KSKGKSADGSWLWCTTEDSVYDAVKSVCPHFPMIVLTPSESMVMHQMIRLPFGTLNFLQM 120
Query: 88 TQHNVGALVVVKPGEQKSVAGIITER 113
TQHNVGALVVVKPG+ KS+AGI+TER
Sbjct: 121 TQHNVGALVVVKPGQNKSIAGIVTER 146
>gi|210162090|gb|ACJ09643.1| putative CBS domain-containing protein [Cupressus sempervirens]
Length = 138
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/117 (75%), Positives = 98/117 (83%), Gaps = 8/117 (6%)
Query: 46 MEEHGFESTTISDILKAKGKGADGSWLWCTTDD-TVYDAVKSMTQHNVGALVVVKPGEQK 104
M+ HG ESTT+SD+L AK ADGSWLWCTTDD +VYDAVKSMTQH+VGALVVV EQK
Sbjct: 1 MDAHG-ESTTMSDVLTAKN--ADGSWLWCTTDDRSVYDAVKSMTQHDVGALVVVTQLEQK 57
Query: 105 SVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDT-KVLRAMQLMTGH 160
S+AGIIT DYLR IIVQ RSSKST VGDIMTEEN+LITV+ DT +VL AMQLMT +
Sbjct: 58 SIAGIITA-DYLR-IIVQ-RSSKSTTVGDIMTEENRLITVTADTNQVLNAMQLMTDN 111
>gi|302142508|emb|CBI19711.3| unnamed protein product [Vitis vinifera]
Length = 147
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/97 (69%), Positives = 82/97 (84%)
Query: 66 GADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRS 125
G GSWLWC T+DTVYDA K M ++N+G+LVV+KPGE K +AGI TERDY+RKII GRS
Sbjct: 50 GKIGSWLWCRTNDTVYDAAKHMAENNIGSLVVLKPGEPKHIAGIFTERDYMRKIIAHGRS 109
Query: 126 SKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
SK TKVG+IMT+ENKL+TVS DT +L+AMQL+TG +L
Sbjct: 110 SKDTKVGEIMTDENKLVTVSSDTNILQAMQLLTGKLL 146
>gi|297846924|ref|XP_002891343.1| hypothetical protein ARALYDRAFT_314186 [Arabidopsis lyrata subsp.
lyrata]
gi|297337185|gb|EFH67602.1| hypothetical protein ARALYDRAFT_314186 [Arabidopsis lyrata subsp.
lyrata]
Length = 192
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 100/131 (76%), Gaps = 1/131 (0%)
Query: 28 PMLRPVVSSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSM 87
P ++ VS+ F V+S E G E+ T++D+L K D +W+ C T+DTV DAVK+M
Sbjct: 16 PKIQTKVSASFGCVTSPPPPEKGLENLTVADVLSTKDADVD-TWISCRTNDTVSDAVKNM 74
Query: 88 TQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPD 147
+HN+G+LVV+KPG+Q+ +AGI+TERDY++KII GRSSK TKVGD+MT+E+KL+TVS
Sbjct: 75 AKHNIGSLVVLKPGDQQYIAGIVTERDYMKKIIGAGRSSKLTKVGDVMTDESKLVTVSSG 134
Query: 148 TKVLRAMQLMT 158
T +++AMQLM+
Sbjct: 135 TNIIKAMQLMS 145
>gi|125526972|gb|EAY75086.1| hypothetical protein OsI_02980 [Oryza sativa Indica Group]
Length = 310
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 108/164 (65%), Gaps = 12/164 (7%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVS-----SRFESVSSARMEEH-GFEST 54
MQG ++ HG +K VLQ M + + S SR ++ S + H G E+
Sbjct: 106 MQGITKALRFHGKQLKLTVLQH------MNKGIFSWATLISRIQTESPTVIIPHIGLENI 159
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+ +IL AKG+ G+ WC T V++A+K MT HNVGALVV+K G++K +AGI+TERD
Sbjct: 160 RVREILNAKGEAKAGAVYWCCTSHFVHEAIKHMTAHNVGALVVLKSGDEKQLAGIVTERD 219
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ RKI++ GR S+ T+VGDIMTEE+KLITVS +T +L+AM+LMT
Sbjct: 220 FARKILLPGRPSEETRVGDIMTEEDKLITVSSNTNILQAMELMT 263
>gi|115438763|ref|NP_001043661.1| Os01g0634900 [Oryza sativa Japonica Group]
gi|55296012|dbj|BAD68903.1| CBS domain protein-like [Oryza sativa Japonica Group]
gi|55296028|dbj|BAD69439.1| CBS domain protein-like [Oryza sativa Japonica Group]
gi|113533192|dbj|BAF05575.1| Os01g0634900 [Oryza sativa Japonica Group]
gi|125571300|gb|EAZ12815.1| hypothetical protein OsJ_02734 [Oryza sativa Japonica Group]
Length = 258
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 108/164 (65%), Gaps = 12/164 (7%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVS-----SRFESVSSARMEEH-GFEST 54
MQG ++ HG +K VLQ M + + S SR ++ S + H G E+
Sbjct: 54 MQGITKALRFHGKQLKLTVLQH------MNKGIFSWATLISRIQTESPTVIIPHIGLENI 107
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+ +IL AKG+ G+ WC T V++A+K MT HNVGALVV+K G++K +AGI+TERD
Sbjct: 108 RVREILNAKGEAKAGAVYWCCTSHFVHEAIKHMTAHNVGALVVLKSGDEKQLAGIVTERD 167
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ RKI++ GR S+ T+VGDIMTEE+KLITVS +T +L+AM+LMT
Sbjct: 168 FARKILLPGRPSEETRVGDIMTEEDKLITVSSNTNILQAMELMT 211
>gi|414881295|tpg|DAA58426.1| TPA: hypothetical protein ZEAMMB73_299878 [Zea mays]
Length = 236
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 109/160 (68%), Gaps = 2/160 (1%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLR-PVVSSRFESVSSARMEEH-GFESTTISD 58
MQG ++ HG ++ AVLQ + + + + SR +S S A + H G E+ T+++
Sbjct: 30 MQGITKALRLHGRQLRHAVLQHMNMNKGIFSWATLISRIQSESPAVIIPHMGLENITVNE 89
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
IL+AKG+ G+ WC+T V++AV+ M HNVGALVV+K G+ +AGI+TERD+ RK
Sbjct: 90 ILRAKGEAEAGAVYWCSTAHLVHEAVQHMAAHNVGALVVLKSGDMNQLAGIVTERDFARK 149
Query: 119 IIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
I++ GR S+ T+V DIMTEE+K+ITVS T +LRAM++MT
Sbjct: 150 ILLPGRPSQQTRVEDIMTEEDKVITVSGRTNILRAMEVMT 189
>gi|242053745|ref|XP_002456018.1| hypothetical protein SORBIDRAFT_03g028940 [Sorghum bicolor]
gi|241927993|gb|EES01138.1| hypothetical protein SORBIDRAFT_03g028940 [Sorghum bicolor]
Length = 205
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 108/164 (65%), Gaps = 12/164 (7%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVS-----SRFESVSSARMEEH-GFEST 54
MQG ++ HG ++ VLQ M + + S SR +S S + H G E+
Sbjct: 1 MQGITKALRLHGRQLRHTVLQH------MNKGIFSWATLISRIQSESPTVIIPHMGLENI 54
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+S+ILKAKG+ G+ WC+T +V++AV+ MT HNVGALVV+K G +AGI+TERD
Sbjct: 55 TVSEILKAKGEAEAGAVYWCSTSHSVHEAVQHMTAHNVGALVVLKSGNMNQLAGIVTERD 114
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ RKI++ GR S+ T+V DIMTEE+KLITVS T +LRAM++MT
Sbjct: 115 FSRKILLPGRPSEETRVEDIMTEEDKLITVSSHTNILRAMEVMT 158
>gi|356518816|ref|XP_003528073.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Glycine max]
Length = 205
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 100/142 (70%), Gaps = 2/142 (1%)
Query: 18 AVLQRIRLVNPMLRPVVSSRFESV-SSARMEEHGFESTTISDILKAKGKGADGSWLWCTT 76
A+ QR + + + S F V SS RM++ G E+ T+S++L KG+ GSWLWC
Sbjct: 18 AIFQRFQGNGILNLNKIYSNFGCVTSSPRMQQKGLENVTVSEVLMTKGEENVGSWLWCRA 77
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DD V +A+K+M +N+G+LVV+KP E + +AGI+TERD L+KI+ QGRS T+VG IMT
Sbjct: 78 DDAVVNAMKNMADNNIGSLVVLKP-EGQHIAGIVTERDCLKKIVAQGRSPLHTQVGQIMT 136
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+EN LITV+ DT +L+AM++MT
Sbjct: 137 DENNLITVTSDTNILKAMKIMT 158
>gi|186489216|ref|NP_001117443.1| Cystathionine beta-synthase (CBS) family protein [Arabidopsis
thaliana]
gi|332194027|gb|AEE32148.1| Cystathionine beta-synthase (CBS) family protein [Arabidopsis
thaliana]
Length = 193
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 97/125 (77%), Gaps = 1/125 (0%)
Query: 34 VSSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVG 93
VS+ F ++S E G E+ T++D+L K D +W+ C T+DTV DAVK+M +HN+G
Sbjct: 23 VSAGFGCLTSPPPPEKGLENLTVADVLSTKDTDID-TWISCRTNDTVSDAVKNMAKHNIG 81
Query: 94 ALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRA 153
+LVV++PG+Q+ +AGI+TERDY++KII GRSSK TKVG++MT+E+KL+TVS T +++A
Sbjct: 82 SLVVLEPGDQQYIAGIVTERDYMKKIIGAGRSSKLTKVGEVMTDESKLVTVSSGTNIIKA 141
Query: 154 MQLMT 158
MQLM+
Sbjct: 142 MQLMS 146
>gi|356509678|ref|XP_003523573.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Glycine max]
Length = 205
Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 94/126 (74%), Gaps = 2/126 (1%)
Query: 34 VSSRFE-SVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNV 92
+ S+F + SS RM++ G E+ T+S++L KG+ GSWLWC DD V +A+K+M +N+
Sbjct: 34 IYSKFGCATSSPRMQQKGLENVTVSEVLMTKGEANVGSWLWCRVDDAVINAMKNMADNNI 93
Query: 93 GALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLR 152
G+LVV+KP E + +AGIITERD L+KI+ QGRS T VG IMT+EN LITV+ +T +L+
Sbjct: 94 GSLVVLKP-EGQHIAGIITERDCLKKIVAQGRSPLHTHVGQIMTDENNLITVTSNTNILQ 152
Query: 153 AMQLMT 158
AM++MT
Sbjct: 153 AMKIMT 158
>gi|357135643|ref|XP_003569418.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Brachypodium distachyon]
Length = 205
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 109/164 (66%), Gaps = 12/164 (7%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVS-----SRFESVSSARMEEH-GFEST 54
MQG ++ HG ++ VL+ M + + S SR +S S A + H G E+
Sbjct: 1 MQGIAKALSFHGKQLRVTVLRH------MNKGIFSWATLISRIQSESPAVIIPHTGLENI 54
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +ILKAKG+ G+ WC+T V++AVK MT NVGALVV+K G++K +AGI+TERD
Sbjct: 55 TVREILKAKGEAEAGAVYWCSTSHLVHEAVKHMTARNVGALVVLKSGDEKKLAGIVTERD 114
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ RKI++ GR S+ T+V DIMT++ KLITV+ +T +LRAM+LMT
Sbjct: 115 FARKILLPGRPSEGTRVEDIMTQDGKLITVTSNTNILRAMELMT 158
>gi|168020527|ref|XP_001762794.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685903|gb|EDQ72295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 244
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 102/152 (67%), Gaps = 10/152 (6%)
Query: 12 GNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARME---EHGFESTTISDILKAKGKGAD 68
G + +VLQ +R+ L + +R ES E EH FESTTI+D+LK KG+ AD
Sbjct: 51 GRTLSGSVLQHVRVGGSALGFGIQTRRESGQIETRESLVEHRFESTTIADVLKDKGQKAD 110
Query: 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR--KIIVQGRSS 126
GSWLWC+ +DTVYDAVKSMT +NV AL+VVK G +K +AGIITER ++ ++IV
Sbjct: 111 GSWLWCSVEDTVYDAVKSMTANNVEALLVVKSGTEKMLAGIITERGLVKLMEMIVLYYDD 170
Query: 127 KSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
++ +NKLITVSPDTKVLRAM+LMT
Sbjct: 171 PY-----LLFMQNKLITVSPDTKVLRAMELMT 197
>gi|51471864|gb|AAU04402.1| unknown [Citrus limon]
Length = 117
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/68 (95%), Positives = 66/68 (97%)
Query: 90 HNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTK 149
HNVGALVVVKPGEQKS AGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN+LIT SPDTK
Sbjct: 1 HNVGALVVVKPGEQKSAAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENQLITASPDTK 60
Query: 150 VLRAMQLM 157
VLRAMQLM
Sbjct: 61 VLRAMQLM 68
>gi|449469967|ref|XP_004152690.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Cucumis sativus]
gi|449520034|ref|XP_004167039.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Cucumis sativus]
Length = 206
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 83/107 (77%), Gaps = 2/107 (1%)
Query: 53 STTISDILKAKGKGADGS-WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
+ T+ +I+ KG+G GS W+ C +DT DAV++M +HN+G+LVV+K E +++AGI+T
Sbjct: 54 NITVREIVSKKGEGGIGSSWISCRAEDTAIDAVQNMARHNIGSLVVMKS-EGENIAGIVT 112
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
ERDYL+KII GRS TKVG+IMT E+KL+T++ DT +L+AMQLMT
Sbjct: 113 ERDYLKKIIADGRSPIYTKVGEIMTHEDKLVTITSDTNILKAMQLMT 159
>gi|307111947|gb|EFN60181.1| hypothetical protein CHLNCDRAFT_33710 [Chlorella variabilis]
Length = 218
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 77/124 (62%), Gaps = 17/124 (13%)
Query: 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGE------- 102
G+ +T + +LKAK + + G+WLWC DD V DAV+ MT NVG+L+V P +
Sbjct: 48 GWGTTRVEALLKAKAEDS-GAWLWCAADDFVIDAVRKMTHANVGSLLVFDPSKMHLVRDK 106
Query: 103 ---------QKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRA 153
+ +V G+ITERDYL K++V+G+ S STKV +IMT +KL TV+P VL
Sbjct: 107 DSKHITNASKDAVVGLITERDYLTKVVVKGKQSSSTKVSEIMTPAHKLQTVTPKHSVLDV 166
Query: 154 MQLM 157
M+LM
Sbjct: 167 MELM 170
>gi|384250881|gb|EIE24360.1| CBS-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 230
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 79/127 (62%), Gaps = 13/127 (10%)
Query: 43 SARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKP-- 100
S+R+ + G+ T I +L++K G+WLWC+ DD V DAVK MT+ NVG+L+V P
Sbjct: 59 SSRVGKQGWGQTKIGQVLQSKHDA--GAWLWCSKDDLVIDAVKKMTKGNVGSLLVFDPEK 116
Query: 101 ---------GEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVL 151
+V GI+TERDYL K++V+ +SSK V IMT+++KL+T +P V+
Sbjct: 117 ITIDQPIKEASGDAVVGIVTERDYLTKVVVKDQSSKDLAVSQIMTDKSKLMTATPQQSVV 176
Query: 152 RAMQLMT 158
M+LMT
Sbjct: 177 DVMKLMT 183
>gi|255086147|ref|XP_002509040.1| predicted protein [Micromonas sp. RCC299]
gi|226524318|gb|ACO70298.1| predicted protein [Micromonas sp. RCC299]
Length = 158
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 70/109 (64%)
Query: 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGI 109
G E T+ D+L K G+WLWC + +AV++MT+ NVGAL++V+ + +VAG+
Sbjct: 1 GLEKYTVGDLLLTKSLEDRGTWLWCDENVPALEAVRTMTKANVGALLLVRGRWEDAVAGV 60
Query: 110 ITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+TERDYLRK++ Q + + +T VG IMT++ DT VL A++ MT
Sbjct: 61 LTERDYLRKVVAQNKDASTTAVGTIMTDKKLYDVAQTDTPVLEALRRMT 109
>gi|452825148|gb|EME32146.1| IMP dehydrogenase [Galdieria sulphuraria]
Length = 263
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 68/107 (63%), Gaps = 7/107 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVK---PGEQKSVAGIIT 111
T+ DILK KG+ + T D VYDA+K M +NVG+LVV+ G GI+T
Sbjct: 113 TVGDILKVKGE----KFYRIKTTDFVYDAIKKMVDNNVGSLVVIDVDGDGITGKPLGIVT 168
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
ERDYLRKI++ GRSSK+T V DIMT N L++VSP + M+LMT
Sbjct: 169 ERDYLRKIVLLGRSSKTTYVKDIMTSANNLVSVSPSASLNDCMELMT 215
>gi|170700325|ref|ZP_02891337.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria IOP40-10]
gi|170134759|gb|EDT03075.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria IOP40-10]
Length = 153
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 72/115 (62%), Gaps = 10/115 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T +D VYDA+K M + +GAL+VV E +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKNDFVYDAIKLMAEKGIGALLVV---EGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
ERDY RK+++Q RSSK+T+V +IMT K+ V P M LMT H + LP
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEHRMRHLP 109
>gi|387905594|ref|YP_006335932.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia sp. KJ006]
gi|387580486|gb|AFJ89201.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia sp. KJ006]
Length = 153
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 73/115 (63%), Gaps = 10/115 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDAVK M + +GAL+V++ E +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKADFVYDAVKLMAEKGIGALLVMEGDE---IAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
ERDY RK+++Q RSSK+T+V +IMT +K+ V P M LMT H + LP
Sbjct: 57 ERDYARKVVLQDRSSKATRVDEIMT--SKVRYVEPSQSSDECMALMTEHRMRHLP 109
>gi|303279450|ref|XP_003059018.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460178|gb|EEH57473.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 243
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 21/136 (15%)
Query: 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPG-------- 101
G E T D+L K G WLW + + +AV+ MT+ NVGAL+V++
Sbjct: 68 GLEKLTAGDLLLQKTLDQRGHWLWVDVNSSALEAVQRMTRANVGALLVMRERVLDVDDDG 127
Query: 102 ----EQKS-------VAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKV 150
E+ S VAG++TERDYL KI+ + + +TKVGD+MT ++++ S DT V
Sbjct: 128 VVTREEASSGKWDDAVAGVVTERDYLHKIVAKHGDASTTKVGDVMTAKDEINVASVDTPV 187
Query: 151 LRAMQLMTG--HMLLP 164
L AM+ M H LP
Sbjct: 188 LEAMRAMIEGRHRHLP 203
>gi|115358872|ref|YP_776010.1| signal-transduction protein [Burkholderia ambifaria AMMD]
gi|115284160|gb|ABI89676.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria AMMD]
Length = 153
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 10/115 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDA+K M + +GAL+VV E +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKTDFVYDAIKLMAEKGIGALLVV---EGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
ERDY RK+++Q RSSK+T+V +IMT K+ V P M LMT H + LP
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEHRMRHLP 109
>gi|134293948|ref|YP_001117684.1| signal-transduction protein [Burkholderia vietnamiensis G4]
gi|134137105|gb|ABO58219.1| putative signal-transduction protein with CBS domains [Burkholderia
vietnamiensis G4]
Length = 153
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 73/115 (63%), Gaps = 10/115 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDAVK M + +GAL+V++ E +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKADFVYDAVKLMAEKGIGALLVMEGDE---IAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
ERDY RK+++Q RSSK+T+V +IMT +K+ V P M LMT H + LP
Sbjct: 57 ERDYARKVVLQDRSSKATRVDEIMT--SKVRYVEPSQSSDECMALMTEHRMRHLP 109
>gi|394986438|pdb|4FRY|A Chain A, The Structure Of A Putative Signal-Transduction Protein
With Cbs Domains From Burkholderia Ambifaria Mc40-6
gi|394986439|pdb|4FRY|B Chain B, The Structure Of A Putative Signal-Transduction Protein
With Cbs Domains From Burkholderia Ambifaria Mc40-6
Length = 157
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 50 GFESTTISDILKAKGKGADGSWLWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAG 108
G STT++ ILKAK G ++ T +D VYDA+K M + +GAL+VV + +AG
Sbjct: 3 GSMSTTVAQILKAKPDS--GRTIYTVTKNDFVYDAIKLMAEKGIGALLVV---DGDDIAG 57
Query: 109 IITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
I+TERDY RK+++Q RSSK+T+V +IMT K+ V P M LMT H +
Sbjct: 58 IVTERDYARKVVLQERSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEHRM 109
>gi|107025989|ref|YP_623500.1| signal-transduction protein [Burkholderia cenocepacia AU 1054]
gi|116692826|ref|YP_838359.1| signal-transduction protein [Burkholderia cenocepacia HI2424]
gi|254250303|ref|ZP_04943623.1| hypothetical protein BCPG_05192 [Burkholderia cenocepacia PC184]
gi|105895363|gb|ABF78527.1| putative signal-transduction protein with CBS domains [Burkholderia
cenocepacia AU 1054]
gi|116650826|gb|ABK11466.1| putative signal-transduction protein with CBS domains [Burkholderia
cenocepacia HI2424]
gi|124876804|gb|EAY66794.1| hypothetical protein BCPG_05192 [Burkholderia cenocepacia PC184]
Length = 153
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 10/115 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDA+K M + +GAL+VV + +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKSDLVYDAIKLMAEKGIGALLVV---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
ERDY RKI++Q RSSK+T+V +IMT K+ V P M LMT H + LP
Sbjct: 57 ERDYARKIVLQDRSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEHRMRHLP 109
>gi|172063607|ref|YP_001811258.1| signal-transduction protein [Burkholderia ambifaria MC40-6]
gi|171996124|gb|ACB67042.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria MC40-6]
Length = 153
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 72/115 (62%), Gaps = 10/115 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T +D VYDA+K M + +GAL+VV + +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKNDFVYDAIKLMAEKGIGALLVV---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
ERDY RK+++Q RSSK+T+V +IMT K+ V P M LMT H + LP
Sbjct: 57 ERDYARKVVLQERSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEHRMRHLP 109
>gi|170737907|ref|YP_001779167.1| signal-transduction protein [Burkholderia cenocepacia MC0-3]
gi|169820095|gb|ACA94677.1| putative signal-transduction protein with CBS domains [Burkholderia
cenocepacia MC0-3]
Length = 153
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 10/115 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDA+K M + +GAL+VV + +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKTDLVYDAIKLMAEKGIGALLVV---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
ERDY RKI++Q RSSK+T+V +IMT K+ V P M LMT H + LP
Sbjct: 57 ERDYARKIVLQDRSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEHRMRHLP 109
>gi|416908508|ref|ZP_11931183.1| signal-transduction protein [Burkholderia sp. TJI49]
gi|325528776|gb|EGD05835.1| signal-transduction protein [Burkholderia sp. TJI49]
Length = 153
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 71/115 (61%), Gaps = 10/115 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDA+K M + +GAL+VV + +AGI+T
Sbjct: 2 STTVAQILKAKPDA--GRTIYTVTKADLVYDAIKLMAEKGIGALLVV---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
ERDY RK+++Q RSSK+T+V +IMT K+ V P M LMT H + LP
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMT--AKVRYVEPSQTTDECMALMTEHRMRHLP 109
>gi|291297328|ref|YP_003508726.1| putative signal transduction protein [Meiothermus ruber DSM 1279]
gi|290472287|gb|ADD29706.1| putative signal transduction protein with CBS domains [Meiothermus
ruber DSM 1279]
Length = 145
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 69/108 (63%), Gaps = 9/108 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
++T+ +L AKG + + TV++A++ M H+VGAL+V+K + + GI +E
Sbjct: 2 TSTVRQLLLAKGNKVHA----ISPEATVFEALERMAAHDVGALMVMKDDQ---LVGIFSE 54
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
RDY RKII+ GR SK T+VG++MT + LITV+P+ V M LMT H
Sbjct: 55 RDYARKIILMGRISKDTRVGEVMTSD--LITVTPEATVADCMNLMTDH 100
>gi|206563771|ref|YP_002234534.1| hypothetical protein BCAM1926 [Burkholderia cenocepacia J2315]
gi|421867786|ref|ZP_16299439.1| CBS domain protein [Burkholderia cenocepacia H111]
gi|444360972|ref|ZP_21162128.1| CBS domain protein [Burkholderia cenocepacia BC7]
gi|444366723|ref|ZP_21166740.1| CBS domain protein [Burkholderia cenocepacia K56-2Valvano]
gi|198039811|emb|CAR55785.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
gi|358072199|emb|CCE50317.1| CBS domain protein [Burkholderia cenocepacia H111]
gi|443598832|gb|ELT67156.1| CBS domain protein [Burkholderia cenocepacia BC7]
gi|443604077|gb|ELT72039.1| CBS domain protein [Burkholderia cenocepacia K56-2Valvano]
Length = 153
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 71/115 (61%), Gaps = 10/115 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDA+K M + +GAL+VV + +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKSDFVYDAIKLMAEKGIGALLVV---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
ERDY RK+++Q RSSK+T+V +IMT K+ V P M LMT H + LP
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEHRMRHLP 109
>gi|171321846|ref|ZP_02910746.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria MEX-5]
gi|171092865|gb|EDT38118.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria MEX-5]
Length = 153
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 71/115 (61%), Gaps = 10/115 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDA+K M + +GAL+VV + +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKTDFVYDAIKLMAEKGIGALLVV---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
ERDY RK+++Q RSSK+T+V +IMT K+ V P M LMT H + LP
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEHRMRHLP 109
>gi|375146265|ref|YP_005008706.1| putative signal transduction protein with CBS domains [Niastella
koreensis GR20-10]
gi|361060311|gb|AEV99302.1| putative signal transduction protein with CBS domains [Niastella
koreensis GR20-10]
Length = 143
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 68/104 (65%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ DIL+ KG + +VY+A++++ N+G+LVV++ E + GI TERD
Sbjct: 3 TVRDILQIKGHVV----YTVNPESSVYEALETLESKNLGSLVVLE--ECGKLDGIFTERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK+I++GRSSK T+V DIMTE + V+PDTK+ MQLMT
Sbjct: 57 YARKVILKGRSSKETRVMDIMTESP--VFVTPDTKIDYCMQLMT 98
>gi|297564581|ref|YP_003683553.1| putative signal transduction protein [Meiothermus silvanus DSM
9946]
gi|296849030|gb|ADH62045.1| putative signal transduction protein with CBS domains [Meiothermus
silvanus DSM 9946]
Length = 143
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 66/108 (61%), Gaps = 9/108 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
+ T+ +L+ KG TVY+A++ M QH+VGAL+V++ G+ + GI +E
Sbjct: 2 TATVRQLLQVKGS----RVFDIHPQATVYEALERMAQHDVGALLVLEEGQ---LVGIFSE 54
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
RDY RKII+ GR+S+ T V ++MT L+TVSP+ V M LMT H
Sbjct: 55 RDYARKIILMGRASRDTPVHEVMT--TDLVTVSPEATVGECMALMTQH 100
>gi|78061876|ref|YP_371784.1| signal-transduction protein [Burkholderia sp. 383]
gi|77969761|gb|ABB11140.1| putative signal-transduction protein with CBS domains [Burkholderia
sp. 383]
Length = 153
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 68/109 (62%), Gaps = 8/109 (7%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ +LKAK G ++ T D VYDA+K M + +GAL+VV + +AGI+T
Sbjct: 2 STTVAQLLKAKPDS--GRTIYTVTKTDLVYDAIKLMAEKGIGALLVV---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
ERDY RK+++Q RSSK+T+V +IMT K+ V P M LMT H
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEH 103
>gi|255086303|ref|XP_002509118.1| predicted protein [Micromonas sp. RCC299]
gi|226524396|gb|ACO70376.1| predicted protein [Micromonas sp. RCC299]
Length = 173
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 71/118 (60%), Gaps = 11/118 (9%)
Query: 51 FESTTISDILKAKGKGAD--GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPG---EQKS 105
F TT++DIL AK + GS WC + V AV+ M +VGAL+V+ + +
Sbjct: 1 FNRTTLADILAAKHRTHTYWGSNHWCDASEPVAVAVRRMNSQDVGALLVMDRSASPQTGA 60
Query: 106 VAGIITERDYLRKIIVQGRSSKSTKVGDIMTE---EN--KLITVSPDTKVLRAMQLMT 158
+ GI+TERDYLR + +G S T VGDIMT+ +N LI+ SPDT VL AM++MT
Sbjct: 61 MRGIVTERDYLRA-VARGAVSPGTAVGDIMTDFATDNGAGLISASPDTSVLAAMEIMT 117
>gi|66819969|ref|XP_643641.1| hypothetical protein DDB_G0275457 [Dictyostelium discoideum AX4]
gi|60471523|gb|EAL69479.1| hypothetical protein DDB_G0275457 [Dictyostelium discoideum AX4]
Length = 259
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 68/112 (60%), Gaps = 6/112 (5%)
Query: 47 EEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSV 106
E F T + DI+K K + ++ +++T+YDA+K M H +G L+VV + S+
Sbjct: 101 EYFAFGDTQVGDIIKEK---QEKQIIYVKSNNTIYDAIKLMNNHGIGCLLVVSEVDG-SL 156
Query: 107 AGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
GI TERDYL K+ + G+SSK T V D MT K++T++ V+ AM+LMT
Sbjct: 157 VGIFTERDYLGKVALMGKSSKETLVQDAMTT--KVVTINSKVGVVEAMKLMT 206
>gi|91776712|ref|YP_546468.1| signal-transduction protein [Methylobacillus flagellatus KT]
gi|91710699|gb|ABE50627.1| putative signal-transduction protein with CBS domains
[Methylobacillus flagellatus KT]
Length = 142
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 71/106 (66%), Gaps = 11/106 (10%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+ +L+ KG S ++ ++ VYDA+ M +H++GALVV+ ++ + GI +ER
Sbjct: 3 TVRQVLETKG-----STVYSVAPESLVYDALLLMAEHHIGALVVM---QRDKMVGIFSER 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTG 159
DY R+++++G++SK+T VGDIM+ +LITVSPD V M LM+G
Sbjct: 55 DYAREVVIKGKTSKTTTVGDIMS--VQLITVSPDDTVEHCMNLMSG 98
>gi|402568485|ref|YP_006617829.1| signal-transduction protein [Burkholderia cepacia GG4]
gi|402249682|gb|AFQ50135.1| putative signal-transduction protein [Burkholderia cepacia GG4]
Length = 153
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 68/109 (62%), Gaps = 8/109 (7%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ D VYDA+K M + +GAL+V+ + + +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVAKADFVYDAIKLMAEKGIGALLVM---DGEDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
ERDY RK+++Q RSSK+T+V +IMT K+ V P M LMT H
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEH 103
>gi|421471493|ref|ZP_15919777.1| CBS domain protein [Burkholderia multivorans ATCC BAA-247]
gi|400225423|gb|EJO55591.1| CBS domain protein [Burkholderia multivorans ATCC BAA-247]
Length = 153
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 68/109 (62%), Gaps = 8/109 (7%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDA+K M+ +GAL+V+ + +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKTDLVYDAIKLMSDKGIGALLVM---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
ERDY RK+++Q RSSK+T+V +IMT K+ V P M LMT H
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMT--TKVRYVEPSQTSDECMALMTEH 103
>gi|254000112|ref|YP_003052175.1| putative signal transduction protein [Methylovorus glucosetrophus
SIP3-4]
gi|313202072|ref|YP_004040730.1| signal transduction protein [Methylovorus sp. MP688]
gi|253986791|gb|ACT51648.1| putative signal transduction protein with CBS domains [Methylovorus
glucosetrophus SIP3-4]
gi|312441388|gb|ADQ85494.1| putative signal transduction protein with CBS domains [Methylovorus
sp. MP688]
Length = 142
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 70/105 (66%), Gaps = 9/105 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L+ KG + L D VYDA+K M ++ VGAL+V++ +++ GI +ERD
Sbjct: 3 TVRQLLEEKGN----TILSVGPDSLVYDALKIMAEYRVGALLVMRG---QALVGIFSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTG 159
Y R+++++G++SK+T V DIM+ +++ITVSPD V M LM+G
Sbjct: 56 YAREVVLKGKTSKTTPVSDIMS--HQVITVSPDQTVDECMNLMSG 98
>gi|167589794|ref|ZP_02382182.1| putative signal-transduction protein with CBS domains [Burkholderia
ubonensis Bu]
Length = 153
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 68/108 (62%), Gaps = 6/108 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
STT++ ILKAK + + TD VYDA+K M + +GAL+V+ + ++GI+TE
Sbjct: 2 STTVAQILKAKPESGRTVYTVRKTD-LVYDAIKLMAEKGIGALLVM---DGDDISGIVTE 57
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
RDY RKI++Q RSSK+T+V +IMT +K+ V P M LMT H
Sbjct: 58 RDYARKIVLQDRSSKATRVEEIMT--SKVRYVEPSQSSDECMALMTEH 103
>gi|320161957|ref|YP_004175182.1| hypothetical protein ANT_25560 [Anaerolinea thermophila UNI-1]
gi|319995811|dbj|BAJ64582.1| hypothetical protein ANT_25560 [Anaerolinea thermophila UNI-1]
Length = 140
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 65/106 (61%), Gaps = 11/106 (10%)
Query: 55 TISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+ IL+ KG S +W D TV+DA++ M +VGALVV+ E V GII+ER
Sbjct: 4 TVRHILEVKG-----SDVWSIGPDATVFDALRMMADKDVGALVVM---ENDKVVGIISER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTG 159
DY RKII+ G+SSK T V +IM+ L TV PD V AM++MT
Sbjct: 56 DYARKIILHGKSSKETLVREIMS--TNLYTVHPDQTVEEAMEIMTN 99
>gi|387792257|ref|YP_006257322.1| putative signal transduction protein [Solitalea canadensis DSM
3403]
gi|379655090|gb|AFD08146.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Solitalea canadensis DSM 3403]
Length = 147
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 68/111 (61%), Gaps = 11/111 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ DIL KG + ++TVYDA++ + + N+GALVV G GI TERDY
Sbjct: 4 VKDILAKKG----NTVYTIDAEETVYDALEDLIEKNIGALVVTDHGRH---IGIFTERDY 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
RK+I++GR+SK T+V +IM+ + L T +P+ +V M++MT + L LP
Sbjct: 57 ARKVILKGRASKETRVREIMS--DHLFTTTPNDEVEECMEVMTCNRLRHLP 105
>gi|389808996|ref|ZP_10205088.1| signal transduction protein [Rhodanobacter thiooxydans LCS2]
gi|388442270|gb|EIL98478.1| signal transduction protein [Rhodanobacter thiooxydans LCS2]
Length = 142
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 62/96 (64%), Gaps = 7/96 (7%)
Query: 63 KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122
+GKG + + V DA+K M +H +GAL+V++ GEQ + G+++ERDY RK+I+Q
Sbjct: 9 QGKG--NAIYSIAPEAPVLDAIKHMAEHRIGALLVMR-GEQ--LVGVMSERDYARKVILQ 63
Query: 123 GRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
GRSS T V DIM+ +TVSPDT V M+L T
Sbjct: 64 GRSSSQTAVSDIMS--GSPLTVSPDTDVFECMRLCT 97
>gi|418531800|ref|ZP_13097711.1| signal-transduction protein with CBS [Comamonas testosteroni ATCC
11996]
gi|371451302|gb|EHN64343.1| signal-transduction protein with CBS [Comamonas testosteroni ATCC
11996]
Length = 151
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 69/107 (64%), Gaps = 8/107 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+++IL+AKG + + + DT+ A++ M + ++GAL+V++ GE +AGI+TER
Sbjct: 2 TTVAEILRAKG---NSTIYSVSPSDTMLAALQLMAEKSIGALLVLEGGE---IAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
DY RKI +QGRSS ST+V ++MT K+ V P M LMT +
Sbjct: 56 DYARKIALQGRSSASTRVDEVMT--RKVHCVLPRQTSEECMSLMTSN 100
>gi|218297014|ref|ZP_03497691.1| putative signal transduction protein with CBS domains [Thermus
aquaticus Y51MC23]
gi|218242569|gb|EED09106.1| putative signal transduction protein with CBS domains [Thermus
aquaticus Y51MC23]
Length = 143
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 69/106 (65%), Gaps = 9/106 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G+ + TV +A++ M QH++GAL+V++ GE+ + GI +ERD
Sbjct: 2 TVRQVLLRKG----GAVYAISPQATVLEALERMAQHDIGALLVME-GEE--LVGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
Y RK+++ GR SK T+V ++MT E ++T+ P+ + AM+LMT H
Sbjct: 55 YARKLVLLGRFSKDTRVEEVMTRE--VVTIRPEADLAEAMRLMTEH 98
>gi|161520491|ref|YP_001583918.1| signal-transduction protein [Burkholderia multivorans ATCC 17616]
gi|189353318|ref|YP_001948945.1| signal-transduction protein [Burkholderia multivorans ATCC 17616]
gi|421474512|ref|ZP_15922544.1| CBS domain protein [Burkholderia multivorans CF2]
gi|160344541|gb|ABX17626.1| putative signal-transduction protein with CBS domains [Burkholderia
multivorans ATCC 17616]
gi|189337340|dbj|BAG46409.1| putative signal-transduction protein [Burkholderia multivorans ATCC
17616]
gi|400232026|gb|EJO61674.1| CBS domain protein [Burkholderia multivorans CF2]
Length = 153
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
STT++ ILKAK + TD VYDA+K M+ +GAL+V+ + +AGI+TE
Sbjct: 2 STTVAQILKAKPDSGRTIYTVKKTD-LVYDAIKLMSDKGIGALLVM---DGDDIAGIVTE 57
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
RDY RK+++Q RSSK+T+V +IMT K+ V P M LMT H + LP
Sbjct: 58 RDYARKVVLQDRSSKATRVEEIMT--TKVRYVEPSQTSDECMALMTEHRMRHLP 109
>gi|221065849|ref|ZP_03541954.1| CBS domain containing protein [Comamonas testosteroni KF-1]
gi|264679584|ref|YP_003279491.1| signal-transduction protein with CBS [Comamonas testosteroni CNB-2]
gi|220710872|gb|EED66240.1| CBS domain containing protein [Comamonas testosteroni KF-1]
gi|262210097|gb|ACY34195.1| putative signal-transduction protein with CBS [Comamonas
testosteroni CNB-2]
Length = 151
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 69/107 (64%), Gaps = 8/107 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+++IL+AKG + + + DT+ A++ M + ++GAL+V++ GE +AGI+TER
Sbjct: 2 TTVAEILRAKG---NSTIYSVSPSDTMLAALQLMAEKSIGALLVLEGGE---IAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
DY RKI +QGRSS ST+V ++MT K+ V P M LMT +
Sbjct: 56 DYARKIALQGRSSASTRVDEVMT--RKVHCVLPRQTSEECMSLMTSN 100
>gi|352079994|ref|ZP_08951063.1| putative signal transduction protein with CBS domains
[Rhodanobacter sp. 2APBS1]
gi|389797851|ref|ZP_10200888.1| signal transduction protein [Rhodanobacter sp. 116-2]
gi|351684703|gb|EHA67772.1| putative signal transduction protein with CBS domains
[Rhodanobacter sp. 2APBS1]
gi|388446514|gb|EIM02543.1| signal transduction protein [Rhodanobacter sp. 116-2]
Length = 142
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 62/96 (64%), Gaps = 7/96 (7%)
Query: 63 KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122
+GKG + + V DA+K M +H +GAL+V++ GEQ + G+++ERDY RK+I+Q
Sbjct: 9 QGKG--NAIYSIAPEAPVLDAIKHMAEHRIGALLVMR-GEQ--LVGVMSERDYARKVILQ 63
Query: 123 GRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
GRSS T V DIM+ +TVSPDT V M+L T
Sbjct: 64 GRSSSQTAVSDIMS--GPPLTVSPDTDVFDCMRLCT 97
>gi|449019275|dbj|BAM82677.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 312
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPG------EQKSVAGIITERDYLRKIIVQGRSSKS 128
+ + TV++AV+ M HNVGA+ VV+P + + + GI TERDYLRKIIV ++SK+
Sbjct: 131 SPESTVFEAVQKMVAHNVGAVAVVEPDANDAARQAQRLVGIFTERDYLRKIIVASKASKT 190
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
T + ++MT++ + V+P +V A+ LMT
Sbjct: 191 TPIAEVMTQDP--VCVTPQQRVGDALHLMT 218
>gi|254254274|ref|ZP_04947591.1| hypothetical protein BDAG_03569 [Burkholderia dolosa AUO158]
gi|124898919|gb|EAY70762.1| hypothetical protein BDAG_03569 [Burkholderia dolosa AUO158]
Length = 153
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 8/109 (7%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ D VYDA+K M + +GAL+V+ + +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYSVRKTDLVYDAIKLMAEKGIGALLVM---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
ERDY RK+++Q RSS++T+V +IMT K+ V P M LMT H
Sbjct: 57 ERDYARKVVLQERSSRATRVEEIMT--AKVRYVEPSQSTDECMALMTEH 103
>gi|256422836|ref|YP_003123489.1| signal transduction protein with CBS domains [Chitinophaga pinensis
DSM 2588]
gi|256037744|gb|ACU61288.1| putative signal transduction protein with CBS domains [Chitinophaga
pinensis DSM 2588]
Length = 120
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 58/86 (67%), Gaps = 6/86 (6%)
Query: 81 YDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENK 140
Y+A++ + + N+GALVVV E+ + GI TERDY RK++++GRSSK T V DIMT+
Sbjct: 2 YEALEVLEEKNLGALVVVDESEK--LIGIFTERDYARKVVLKGRSSKETYVRDIMTDSP- 58
Query: 141 LITVSPDTKVLRAMQLMTGHML--LP 164
+ VSPDT + MQLMT + LP
Sbjct: 59 -VFVSPDTDIEYCMQLMTNKFIRHLP 83
>gi|255034048|ref|YP_003084669.1| putative signal transduction protein [Dyadobacter fermentans DSM
18053]
gi|254946804|gb|ACT91504.1| putative signal transduction protein with CBS domains [Dyadobacter
fermentans DSM 18053]
Length = 140
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 62/88 (70%), Gaps = 6/88 (6%)
Query: 72 LWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
+W T D+TV++A++ M + N+GA++V++ E + GI +ERDY RK+I+QGR+SK T
Sbjct: 9 IWSVTQDNTVFEALELMAEKNIGAVLVLEDNE---LIGIFSERDYARKVILQGRASKDTL 65
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ D+MT ++ITV D K+ MQ+M+
Sbjct: 66 IRDVMTA--RVITVETDAKIEECMQIMS 91
>gi|333902040|ref|YP_004475913.1| signal transduction protein with CBS domains [Pseudomonas fulva
12-X]
gi|333117305|gb|AEF23819.1| putative signal transduction protein with CBS domains [Pseudomonas
fulva 12-X]
Length = 145
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 67/108 (62%), Gaps = 8/108 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++D+LK+K + T D +V+ AVK M + +GALVV+ E + +AGI++ERD
Sbjct: 4 TVADVLKSK---PISNVYSVTPDSSVFAAVKLMAEKGIGALVVL---EGERLAGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
Y+RK+ VQ RS + KV +IMT K+ITVSP M+LMT L
Sbjct: 58 YVRKVAVQERSPANLKVSEIMTA--KVITVSPGEDARHCMELMTNGRL 103
>gi|319786359|ref|YP_004145834.1| signal transduction protein with CBS domains [Pseudoxanthomonas
suwonensis 11-1]
gi|317464871|gb|ADV26603.1| putative signal transduction protein with CBS domains
[Pseudoxanthomonas suwonensis 11-1]
Length = 142
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DAV+ M ++GA++V++ GE +AGI++ERDY RKI++QGRSS T V IMT
Sbjct: 21 DAPVIDAVRLMADKSIGAVLVMRGGE---LAGILSERDYARKIVLQGRSSADTPVRAIMT 77
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
E ++TV+PDT V MQL+T
Sbjct: 78 AE--VVTVAPDTTVPACMQLVT 97
>gi|395220025|ref|ZP_10402617.1| signal transduction protein with CBS domains [Pontibacter sp.
BAB1700]
gi|394453756|gb|EJF08577.1| signal transduction protein with CBS domains [Pontibacter sp.
BAB1700]
Length = 145
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 67/104 (64%), Gaps = 9/104 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG + TVY A+++M + NVGAL+V+ G+ AG+ TERD
Sbjct: 3 TVRHILQKKG----NKVISVAPTSTVYSALETMVEQNVGALIVMDNGK---FAGMFTERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK+I++G++S+ T V +IM+E +TV+PDT + + M+LMT
Sbjct: 56 YARKVILKGKASRDTLVQEIMSEHP--VTVTPDTTLEQCMKLMT 97
>gi|209516332|ref|ZP_03265189.1| CBS domain containing protein [Burkholderia sp. H160]
gi|209503268|gb|EEA03267.1| CBS domain containing protein [Burkholderia sp. H160]
Length = 147
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 65/105 (61%), Gaps = 7/105 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++ +LK K +D + DD+VY+A++ M + +GALVV + S+AGI+TER
Sbjct: 2 TSVAQLLKTKPNSSDVYTIGA--DDSVYEAIRLMAEKGIGALVVT---DGDSIAGIVTER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
DY RKI++ RSSK+T V DIM++ + V PD M LMT
Sbjct: 57 DYARKIVLMDRSSKATPVRDIMSKAVRF--VRPDQTTEECMALMT 99
>gi|384440463|ref|YP_005655187.1| hypothetical protein [Thermus sp. CCB_US3_UF1]
gi|359291596|gb|AEV17113.1| CBS domain protein [Thermus sp. CCB_US3_UF1]
Length = 143
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 68/106 (64%), Gaps = 9/106 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G + + TV +A+K++ QH++GAL+V+ E + + GI +ERD
Sbjct: 2 TVRQVLLRKG----GEVYAISPEATVLEALKALAQHDIGALLVM---EGERLLGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
Y RK+++ GR SK T+V ++MT + +T+ P+ + +AM+LMT H
Sbjct: 55 YARKLVLLGRFSKDTRVAEVMTPDP--LTLPPEADLAQAMRLMTEH 98
>gi|320449248|ref|YP_004201344.1| hypothetical protein TSC_c01460 [Thermus scotoductus SA-01]
gi|320149417|gb|ADW20795.1| CBS domain containing protein [Thermus scotoductus SA-01]
Length = 143
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 67/106 (63%), Gaps = 9/106 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G TV +A++ + +H++GAL+V+ E + + GI +ERD
Sbjct: 2 TVRQVLLRKG----GGVYSVHPQATVLEALRKLAEHDIGALLVM---EGERLLGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
Y RK+++ GR SK T+V ++MT E +ITV+P+T + AM+LMT H
Sbjct: 55 YARKLVLLGRFSKGTRVEEVMTRE--VITVTPETTLQEAMRLMTEH 98
>gi|299533325|ref|ZP_07046709.1| putative signal-transduction protein with CBS [Comamonas
testosteroni S44]
gi|298718855|gb|EFI59828.1| putative signal-transduction protein with CBS [Comamonas
testosteroni S44]
Length = 151
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 69/107 (64%), Gaps = 8/107 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+++IL+AKG + + + DT+ A++ M + ++GAL+V++ G+ +AGI+TER
Sbjct: 2 TTVAEILRAKG---NSTIYSVSPSDTMLAALQLMAEKSIGALLVLEGGD---IAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
DY RKI +QGRSS ST+V ++MT K+ V P M LMT +
Sbjct: 56 DYARKIALQGRSSASTRVDEVMT--RKVHCVLPRQTSEECMSLMTSN 100
>gi|91778432|ref|YP_553640.1| signal-transduction protein [Burkholderia xenovorans LB400]
gi|385204644|ref|ZP_10031514.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
gi|91691092|gb|ABE34290.1| Signal-transduction protein containing CBS domains [Burkholderia
xenovorans LB400]
gi|385184535|gb|EIF33809.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
Length = 147
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 63/105 (60%), Gaps = 7/105 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++ +LK K + DD+VYDA+K M + +GALVV + S+AGI+TER
Sbjct: 2 TSVAQLLKTKPNNT--TVFTVGADDSVYDAIKLMAEKGIGALVVT---DGDSIAGIVTER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
DY RK+++ RSSK+T V DIM++ + V PD M LMT
Sbjct: 57 DYARKVVLLDRSSKATPVRDIMSKAVRF--VRPDQTTDDCMALMT 99
>gi|421484626|ref|ZP_15932194.1| hypothetical protein QWC_18467 [Achromobacter piechaudii HLE]
gi|400197121|gb|EJO30089.1| hypothetical protein QWC_18467 [Achromobacter piechaudii HLE]
Length = 146
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 68/104 (65%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+++IL+ K + S + + D +VYDA+K+M + ++GA+VVV E +V G+++ERD
Sbjct: 3 TVAEILREK---PNQSVVTVSPDSSVYDAIKTMAERSIGAVVVV---EGDTVLGMLSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK+++Q RSS+STKV DIMT + + V P M +MT
Sbjct: 57 YARKVVLQDRSSRSTKVRDIMT--DSVYYVGPGDTREHCMAMMT 98
>gi|410698094|gb|AFV77162.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Thermus oshimai JL-2]
Length = 143
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 66/106 (62%), Gaps = 9/106 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G+ + TV +A+K + +H+VGAL+V+ E + GI +ERD
Sbjct: 2 TVRQLLLRKG----GAVYRIRPEATVLEALKELARHDVGALLVM---EGDRLLGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
Y RK+++ GR SK T V ++MTE ITV+P+T + AM+LMT H
Sbjct: 55 YARKLVLLGRFSKDTLVREVMTENP--ITVTPETDLEEAMRLMTEH 98
>gi|334131314|ref|ZP_08505079.1| CBS domain containing membrane protein [Methyloversatilis
universalis FAM5]
gi|333443663|gb|EGK71625.1| CBS domain containing membrane protein [Methyloversatilis
universalis FAM5]
Length = 143
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 60/94 (63%), Gaps = 5/94 (5%)
Query: 65 KGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124
+G G D+TV A++ M +GA++V G ++AGI +ERDY RK+++QG+
Sbjct: 9 EGKTGPVATVEADNTVVSALRVMANRGIGAVLVTDNG---ALAGIFSERDYARKVVLQGK 65
Query: 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
S ST V DIMT +KLI V+PD V +AMQLM+
Sbjct: 66 DSSSTPVRDIMT--SKLIHVTPDMTVDQAMQLMS 97
>gi|422317676|ref|ZP_16398976.1| hypothetical protein HMPREF0005_03245 [Achromobacter xylosoxidans
C54]
gi|317407797|gb|EFV87724.1| hypothetical protein HMPREF0005_03245 [Achromobacter xylosoxidans
C54]
Length = 146
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 68/103 (66%), Gaps = 8/103 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+++IL+ K A+ + + + D +VYDA+K+M + ++GA+VV + E V G++TERDY
Sbjct: 4 VAEILREK---ANPAVVTVSPDSSVYDAIKTMAERSIGAVVVAQGDE---VLGMLTERDY 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
RKI++Q RSS++TKV +IMT + + V P+ M LMT
Sbjct: 58 ARKIVLQDRSSRTTKVREIMT--DSVFYVRPEDTREHCMALMT 98
>gi|291279824|ref|YP_003496659.1| signal transduction protein [Deferribacter desulfuricans SSM1]
gi|290754526|dbj|BAI80903.1| signal transduction protein [Deferribacter desulfuricans SSM1]
Length = 147
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 65/105 (61%), Gaps = 9/105 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+ DIL KG + D TVYDA+K M +N+G+ V+V G++ + GI TER
Sbjct: 3 TTVKDILAKKG----NQIFTVSADSTVYDALKVMADNNIGS-VLVMDGDK--MVGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
DY RK+I++G+ SK T + ++MTE K+I++ P+ + LMT
Sbjct: 56 DYARKLILKGKYSKDTPIKEVMTE--KVISIKPEATTEACLALMT 98
>gi|238024821|ref|YP_002909053.1| signal-transduction protein [Burkholderia glumae BGR1]
gi|237879486|gb|ACR31818.1| signal-transduction protein [Burkholderia glumae BGR1]
Length = 154
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 69/109 (63%), Gaps = 8/109 (7%)
Query: 53 STTISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT+++ILK+K + G ++ D++VYDA+K M +VGALVV E + GI+T
Sbjct: 2 STTVANILKSKPEA--GRTVYTIGKDESVYDALKLMAIKSVGALVVT---EGNDIVGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
ERDY RK+++ RSSK+T++ +IMT K+ V P + M LMT H
Sbjct: 57 ERDYARKVVLLERSSKATRIEEIMT--MKVRYVEPSQTSDQCMALMTEH 103
>gi|187919677|ref|YP_001888708.1| signal-transduction protein with CBS domains [Burkholderia
phytofirmans PsJN]
gi|187718115|gb|ACD19338.1| putative signal-transduction protein with CBS domains [Burkholderia
phytofirmans PsJN]
Length = 147
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 7/105 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++ +LK K + DD+VY+A+K M + +GALVV + S+AGI+TER
Sbjct: 2 TSVAQLLKTKPNNT--TVFTVGADDSVYEAIKLMAEKGIGALVVT---DGDSIAGIVTER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
DY RK+++ RSSK+T V DIM++ + V PD M LMT
Sbjct: 57 DYARKVVLMDRSSKATPVRDIMSKAVRF--VRPDQTTDDCMALMT 99
>gi|121604315|ref|YP_981644.1| signal-transduction protein [Polaromonas naphthalenivorans CJ2]
gi|120593284|gb|ABM36723.1| putative signal-transduction protein with CBS domains [Polaromonas
naphthalenivorans CJ2]
Length = 146
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 68/113 (60%), Gaps = 10/113 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++DILK+KG A + DD+V+DA+K M +GAL+V+ E ++ GI+TER
Sbjct: 2 TAVADILKSKGGAAVHTI---RPDDSVFDALKCMADKGIGALLVM---EGDAIVGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RKI ++GR+S T+V D+MT ++ V P M LMT + L LP
Sbjct: 56 DYARKIALKGRTSALTQVRDVMT--TSVMFVQPTQTSEECMALMTDNRLRHLP 106
>gi|295699415|ref|YP_003607308.1| signal transduction protein with CBS domains [Burkholderia sp.
CCGE1002]
gi|295438628|gb|ADG17797.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1002]
Length = 147
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 65/105 (61%), Gaps = 7/105 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++ +LK K ++ + DD+VY+A++ M + +GALVV + S+AGI+TER
Sbjct: 2 TSVAQLLKTKPNSSEVYTIGA--DDSVYEAIRLMAEKGIGALVVT---DGDSIAGIVTER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
DY RKI++ RSSK+T V DIM++ + V PD M LMT
Sbjct: 57 DYARKIVLMDRSSKATPVRDIMSKAVRF--VRPDQTTEDCMALMT 99
>gi|221196034|ref|ZP_03569081.1| CBS domain protein [Burkholderia multivorans CGD2M]
gi|221202708|ref|ZP_03575727.1| CBS domain protein [Burkholderia multivorans CGD2]
gi|221176642|gb|EEE09070.1| CBS domain protein [Burkholderia multivorans CGD2]
gi|221182588|gb|EEE14988.1| CBS domain protein [Burkholderia multivorans CGD2M]
Length = 149
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 65/106 (61%), Gaps = 8/106 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
++ ILKAK G ++ T D VYDA+K M+ +GAL+V+ + +AGI+TERD
Sbjct: 1 MAQILKAKPDS--GRTIYTVTKTDLVYDAIKLMSDKGIGALLVM---DGDDIAGIVTERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
Y RK+++Q RSSK+T+V +IMT K+ V P M LMT H
Sbjct: 56 YARKVVLQDRSSKATRVEEIMT--TKVRYVEPSQTSDECMALMTEH 99
>gi|171057111|ref|YP_001789460.1| signal-transduction protein [Leptothrix cholodnii SP-6]
gi|170774556|gb|ACB32695.1| putative signal-transduction protein with CBS domains [Leptothrix
cholodnii SP-6]
Length = 158
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 8/109 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++DILK+K + + T TV+DAVK M + +GAL+V + GEQ + GI+TER
Sbjct: 14 TSVADILKSKPQAVVHT---TTPSTTVFDAVKLMAEKGIGALLVTE-GEQ--LVGIVTER 67
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
DY RK+ + RSS+ T V DIMT + ++ V PD M LMT + L
Sbjct: 68 DYARKVALMSRSSRETPVRDIMTAD--VMFVRPDQTSSECMALMTENRL 114
>gi|294650507|ref|ZP_06727866.1| cystathionine beta-synthase [Acinetobacter haemolyticus ATCC 19194]
gi|292823650|gb|EFF82494.1| cystathionine beta-synthase [Acinetobacter haemolyticus ATCC 19194]
Length = 143
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A+ S + + TV +A+K M VGALVV E + V GI +ER
Sbjct: 2 TIVAQVIKNK---AEQSIFTISPNSTVLEAIKIMADKGVGALVV---AEDEKVIGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RKI + RSS ST V DIMT +K+ITVS + V +QLMT L LP
Sbjct: 56 DYTRKIALMERSSNSTLVADIMT--SKVITVSLNNTVEECLQLMTDRHLRHLP 106
>gi|257091949|ref|YP_003165590.1| CBS domain containing membrane protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044473|gb|ACV33661.1| CBS domain containing membrane protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 143
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 60/90 (66%), Gaps = 5/90 (5%)
Query: 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS 128
G + + DD V+ A++ M HNVGA++V+ + K + GI +ERDY RK+I+ G++SK
Sbjct: 13 GPLVIVSPDDAVFHALQVMADHNVGAVLVL---DGKQLVGIFSERDYARKVILFGKASKD 69
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
T+V +IMT +K++ V+PD V M +MT
Sbjct: 70 TRVREIMT--DKVLYVTPDRTVDECMAIMT 97
>gi|226952931|ref|ZP_03823395.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
gi|226836252|gb|EEH68635.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
Length = 143
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A+ S + + TV +A+K M VGALVV E + V GI +ER
Sbjct: 2 TIVAQVIKNK---AEQSVFTISPNSTVLEAIKIMADKGVGALVV---AEDEKVIGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RKI + RSS ST V DIMT +K+ITVS + V +QLMT L LP
Sbjct: 56 DYTRKIALMERSSNSTLVADIMT--SKVITVSLNNTVEECLQLMTDRHLRHLP 106
>gi|34499375|ref|NP_903590.1| hypothetical protein CV_3920 [Chromobacterium violaceum ATCC 12472]
gi|34105225|gb|AAQ61581.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 144
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 68/104 (65%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L +K A ++ T D TV+ A++ M ++++GA++V++ G+ + GI +ERD
Sbjct: 3 TVRQLLDSKPTRA---LVYVTPDSTVFQALQVMAENDIGAVLVMESGD---IVGIFSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y R+I++QGR+S TKV DIMT ++++ V+P + M LMT
Sbjct: 57 YARRIVLQGRTSAGTKVRDIMT--SRVVYVTPQQTLDECMGLMT 98
>gi|312602131|ref|YP_004021976.1| CBS domain containing protein [Burkholderia rhizoxinica HKI 454]
gi|312169445|emb|CBW76457.1| CBS domain containing protein [Burkholderia rhizoxinica HKI 454]
Length = 185
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 8/113 (7%)
Query: 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGI 109
G T++ ILK+K D + VYDA+K M + +GALVV + G+ + GI
Sbjct: 37 GHPMATVAQILKSK---PDTTVYTIDASALVYDAMKRMAEKQIGALVVTENGK---IVGI 90
Query: 110 ITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
+TERDY RKI++ RSSK+T V DIMT + + V P+ M L+T H +
Sbjct: 91 VTERDYARKIVLMDRSSKATAVRDIMTRDVRY--VRPEDSAQGCMALVTEHRM 141
>gi|431800237|ref|YP_007227140.1| hypothetical protein B479_01395 [Pseudomonas putida HB3267]
gi|430791002|gb|AGA71197.1| hypothetical protein B479_01395 [Pseudomonas putida HB3267]
Length = 145
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 7/108 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ ILK K + + DD+V DA+K + + NVGAL VV E V GI++ERD
Sbjct: 3 TVEQILKTKSQHQ--TVYTIGPDDSVLDALKMLAEKNVGALPVV---EANQVVGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
Y RK++++GRSS +T V +IM+ ++TV P K+ M LMT L
Sbjct: 58 YARKLVLKGRSSAATPVREIMSA--PVVTVEPKQKLDYCMNLMTDRHL 103
>gi|420251570|ref|ZP_14754734.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. BT03]
gi|398057451|gb|EJL49412.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. BT03]
Length = 160
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 12/113 (10%)
Query: 55 TISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
+++ L++K D +W T +VYDA+ M VGAL+V G +AGI+TER
Sbjct: 3 SVAQFLRSK----DSQTVWSTHASASVYDAIAIMAHRQVGALIVANEGR---LAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RKI++ RSS++T V DIM+ E + VSP M LMT H + LP
Sbjct: 56 DYARKIVLMDRSSRNTPVRDIMSTEVR--HVSPQHTTDECMALMTEHRIRYLP 106
>gi|304312239|ref|YP_003811837.1| hypothetical protein HDN1F_26110 [gamma proteobacterium HdN1]
gi|301797972|emb|CBL46194.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
Length = 147
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 63/104 (60%), Gaps = 10/104 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+ D+LK K W DT V DA++ M VGALVV+ E+K V+GIITERD
Sbjct: 4 VRDLLKQKT----NQQTWTVQPDTKVLDALQLMADKGVGALVVM---EKKRVSGIITERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK+++ RSS + V +IM+ ++L+TV PD V M++MT
Sbjct: 57 YARKVVLMARSSHTATVSEIMS--DQLLTVDPDQTVEECMEIMT 98
>gi|359781111|ref|ZP_09284336.1| hypothetical protein PPL19_08636 [Pseudomonas psychrotolerans L19]
gi|359371171|gb|EHK71737.1| hypothetical protein PPL19_08636 [Pseudomonas psychrotolerans L19]
Length = 144
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 5/86 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + NVGAL V++ GE + GI++ERDY RK+ +QGRSS +T V +IMT
Sbjct: 22 DAWVLDALRLMAEKNVGALPVMRDGE---LVGIVSERDYARKVALQGRSSYATPVSEIMT 78
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML 162
E +I V P V MQ+MT H L
Sbjct: 79 E--AVIIVLPQQTVGDCMQMMTDHHL 102
>gi|293606465|ref|ZP_06688823.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
gi|292815088|gb|EFF74211.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
Length = 154
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 68/104 (65%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+++IL+ K A + + D +V+DA+K+M + +GA+VVV+ GE +V G+++ERD
Sbjct: 11 TVAEILREKSNNA---VVTVSPDSSVFDAIKTMAERRIGAVVVVQ-GE--TVLGMLSERD 64
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK+++Q RSS++TKV DIMT + + V P M +MT
Sbjct: 65 YARKVVLQDRSSRTTKVRDIMT--DSVYYVGPGDTREHCMAMMT 106
>gi|421530746|ref|ZP_15977211.1| hypothetical protein PPS11_38130 [Pseudomonas putida S11]
gi|402211864|gb|EJT83296.1| hypothetical protein PPS11_38130 [Pseudomonas putida S11]
Length = 145
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 63/108 (58%), Gaps = 7/108 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ ILK K + + DD+V DA+K + + NVGAL VV E V GI++ERD
Sbjct: 3 TVEQILKTKSQ--HQTVYTIGPDDSVLDALKMLAEKNVGALPVV---EANQVVGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
Y RK++++GRSS +T V +IM+ ++TV P + M LMT L
Sbjct: 58 YARKLVLKGRSSAATPVREIMSA--PVVTVEPKQNLEYCMNLMTNRHL 103
>gi|389776666|ref|ZP_10194097.1| putative signal transduction protein [Rhodanobacter spathiphylli
B39]
gi|388436468|gb|EIL93332.1| putative signal transduction protein [Rhodanobacter spathiphylli
B39]
Length = 142
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 6/91 (6%)
Query: 69 GSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127
G+ ++ +T V +A+K M +H VGAL+V+ GE+ + G+++ERDY RK+I+QGRSS
Sbjct: 12 GNAIYRVAPETPVLEAIKHMAEHRVGALLVMH-GEK--LVGVMSERDYARKVILQGRSSS 68
Query: 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
T V DIMT +TV PDT V M+L T
Sbjct: 69 QTAVSDIMT--GTPLTVGPDTDVFDCMRLCT 97
>gi|256424385|ref|YP_003125038.1| signal transduction protein with CBS domains [Chitinophaga pinensis
DSM 2588]
gi|256039293|gb|ACU62837.1| putative signal transduction protein with CBS domains [Chitinophaga
pinensis DSM 2588]
Length = 146
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ DIL+ KG DDTV+DA+ + NVGALVV+ G+ + V GI +ERD
Sbjct: 3 TVRDILRVKGHAV----YSVQPDDTVFDALSVLVDKNVGALVVL--GDNEKVLGIFSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y R++I++GR+SK T + +IMTE TV+ + + M MT
Sbjct: 57 YARRVILKGRASKETLIREIMTEHP--FTVTEEDSIQDCMVKMT 98
>gi|383757315|ref|YP_005436300.1| hypothetical protein RGE_14600 [Rubrivivax gelatinosus IL144]
gi|381377984|dbj|BAL94801.1| hypothetical protein RGE_14600 [Rubrivivax gelatinosus IL144]
Length = 142
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 58/90 (64%), Gaps = 6/90 (6%)
Query: 72 LW-CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
LW DD+VY A++ + +H +GAL+V+ G + G+++ERDY RK+ +QGR+S+ TK
Sbjct: 15 LWHLHPDDSVYAALELLAEHEIGALLVMDGG---RLVGVVSERDYTRKVALQGRNSRETK 71
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
V +IMT E ++ V D + M LM+ H
Sbjct: 72 VAEIMTRE--VVRVQSDAPMHECMALMSEH 99
>gi|423013390|ref|ZP_17004111.1| CBS domain pair family protein 3 [Achromobacter xylosoxidans AXX-A]
gi|338783618|gb|EGP47981.1| CBS domain pair family protein 3 [Achromobacter xylosoxidans AXX-A]
Length = 130
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 57/87 (65%), Gaps = 5/87 (5%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T D +VYDA+K+M + ++GA+VV E V G++TERDY RKI++Q RSS++TKV
Sbjct: 1 MTVTPDSSVYDAIKTMAERSIGAVVV---AEGDEVLGMLTERDYARKIVLQDRSSRTTKV 57
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMT 158
+IMT + + V P+ M LMT
Sbjct: 58 REIMT--DSVFYVRPEDTREHCMALMT 82
>gi|26986946|ref|NP_742371.1| hypothetical protein PP_0202 [Pseudomonas putida KT2440]
gi|395446551|ref|YP_006386804.1| CBS domain-containing protein [Pseudomonas putida ND6]
gi|24981558|gb|AAN65835.1|AE016212_1 CBS domain protein [Pseudomonas putida KT2440]
gi|388560548|gb|AFK69689.1| CBS domain-containing protein [Pseudomonas putida ND6]
Length = 145
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 66/108 (61%), Gaps = 7/108 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ ILK K + + DD+V DA+K + + N+GAL VV+ G+ V GI++ERD
Sbjct: 3 TVEQILKTKSQHQ--TVYTIGPDDSVLDALKLLAEKNIGALPVVEGGQ---VVGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
Y RK++++GRSS +T V +IM+ ++TV P K+ M LMT L
Sbjct: 58 YARKLVLKGRSSAATPVREIMSA--PVVTVEPKQKLDFCMNLMTDRHL 103
>gi|148545482|ref|YP_001265584.1| hypothetical protein Pput_0225 [Pseudomonas putida F1]
gi|397697387|ref|YP_006535270.1| CBS domain-containing protein [Pseudomonas putida DOT-T1E]
gi|421525151|ref|ZP_15971772.1| hypothetical protein PPUTLS46_25013 [Pseudomonas putida LS46]
gi|148509540|gb|ABQ76400.1| CBS domain containing protein [Pseudomonas putida F1]
gi|397334117|gb|AFO50476.1| CBS domain-containing protein [Pseudomonas putida DOT-T1E]
gi|402751614|gb|EJX12127.1| hypothetical protein PPUTLS46_25013 [Pseudomonas putida LS46]
Length = 145
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 66/108 (61%), Gaps = 7/108 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ ILK K + + DD+V DA+K + + N+GAL VV+ G+ V GI++ERD
Sbjct: 3 TVEQILKTKSQHQ--TVYTIGPDDSVLDALKLLAEKNIGALPVVEGGQ---VVGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
Y RK++++GRSS +T V +IM+ ++TV P K+ M LMT L
Sbjct: 58 YARKLVLKGRSSAATPVREIMSA--PVVTVDPKQKLDFCMNLMTDRHL 103
>gi|167031246|ref|YP_001666477.1| hypothetical protein PputGB1_0228 [Pseudomonas putida GB-1]
gi|166857734|gb|ABY96141.1| CBS domain containing protein [Pseudomonas putida GB-1]
Length = 145
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 7/108 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ ILK K + + DD+V DA+K + + NVGAL VV E V GI++ERD
Sbjct: 3 TVEQILKTKSQHQ--TVYTIGPDDSVLDALKMLAEKNVGALPVV---EGNQVVGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
Y RK++++GRSS +T V +IM+ ++TV P K+ M LMT L
Sbjct: 58 YARKLVLKGRSSAATPVREIMSA--PVVTVEPKQKLDFCMNLMTDRHL 103
>gi|325272356|ref|ZP_08138756.1| CBS domain-containing protein [Pseudomonas sp. TJI-51]
gi|324102516|gb|EGB99962.1| CBS domain-containing protein [Pseudomonas sp. TJI-51]
Length = 145
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 64/108 (59%), Gaps = 7/108 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ ILK K + + DD+V DA+K + + N+GAL VV E K V GI++ERD
Sbjct: 3 TVEQILKTKSQHQ--TVYTIGPDDSVLDALKMLAEKNIGALPVV---EGKQVVGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
Y RK++++GRSS +T V +IM+ ++TV P + M LMT L
Sbjct: 58 YARKLVLKGRSSAATPVREIMS--APVVTVEPRQNLEYCMNLMTDRHL 103
>gi|294508543|ref|YP_003572602.1| hypothetical protein SRM_02729 [Salinibacter ruber M8]
gi|294344872|emb|CBH25650.1| CBS domain protein [Salinibacter ruber M8]
Length = 160
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 46 MEEHGFESTTISDILKAKGK-GADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQK 104
M+E T + D+L+ KG +G L T DTVYD + +M +G++V+ + E
Sbjct: 1 MDERELVETRVRDVLRTKGTLQQNGDVLTATPTDTVYDCIDAMVDRGIGSIVITEDDE-- 58
Query: 105 SVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+ GI TERDY+R I ++GRSS T+V ++MTE+
Sbjct: 59 -MVGIFTERDYMRDIALKGRSSPETEVQEVMTED 91
>gi|330820198|ref|YP_004349060.1| putative signal-transduction protein [Burkholderia gladioli BSR3]
gi|327372193|gb|AEA63548.1| Putative signal-transduction protein [Burkholderia gladioli BSR3]
Length = 153
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
STT+++ILK+K A + +D+VYDA+K M +GALVV K GE + GI+TE
Sbjct: 2 STTVANILKSK-PDAGQTVHTIGKNDSVYDALKLMAIKGIGALVV-KEGE--DIVGIVTE 57
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
RDY RK+++ RSSK T++ +IMT K+ V P + M LMT H + LP
Sbjct: 58 RDYARKVVLLERSSKDTRIEEIMT--VKVRYVEPSETSDQCMALMTEHRMRHLP 109
>gi|387792221|ref|YP_006257286.1| putative signal transduction protein [Solitalea canadensis DSM
3403]
gi|379655054|gb|AFD08110.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Solitalea canadensis DSM 3403]
Length = 144
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 66/111 (59%), Gaps = 11/111 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ IL+ KG + TVYDA++ + + N+GAL+VV + + GI TERDY
Sbjct: 4 VRSILQLKGNAV----FTISPSHTVYDALELLVEKNIGALMVV---DNERFVGIFTERDY 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
RK+I++GRSSK T +G+IMT + ++V+ D + M+LMT + LP
Sbjct: 57 ARKVILKGRSSKETLIGEIMT--STPVSVTIDDSIEHCMKLMTNKFIRHLP 105
>gi|221209739|ref|ZP_03582720.1| CBS domain protein [Burkholderia multivorans CGD1]
gi|221170427|gb|EEE02893.1| CBS domain protein [Burkholderia multivorans CGD1]
Length = 149
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 63/105 (60%), Gaps = 6/105 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
++ ILKAK + TD VYDA+K M+ +GAL+V+ + +AGI+TERDY
Sbjct: 1 MAQILKAKPDSGRTIYTVKKTD-LVYDAIKLMSDKGIGALLVM---DGDDIAGIVTERDY 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
RK+++Q RSSK+T+V +IMT K+ V P M LMT H
Sbjct: 57 ARKVVLQDRSSKATRVEEIMT--TKVRYVEPSQTSDECMALMTEH 99
>gi|357416661|ref|YP_004929681.1| hypothetical protein DSC_04935 [Pseudoxanthomonas spadix BD-a59]
gi|355334239|gb|AER55640.1| hypothetical protein DSC_04935 [Pseudoxanthomonas spadix BD-a59]
Length = 136
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 66 GADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRS 125
G + T D V++AV+ M QH VGA++V++ + + GI++ERDY RK+++ RS
Sbjct: 4 GKTAELVTVTPDQPVFEAVRKMDQHGVGAVLVMRG---QVLVGILSERDYARKVVLLERS 60
Query: 126 SKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
S+ST+V IMT E ++TV P V M++MT
Sbjct: 61 SRSTRVEQIMTTE--VVTVEPQQSVAHCMEVMT 91
>gi|170719459|ref|YP_001747147.1| hypothetical protein PputW619_0272 [Pseudomonas putida W619]
gi|169757462|gb|ACA70778.1| CBS domain containing protein [Pseudomonas putida W619]
Length = 145
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DD+V DA+K + + NVGAL VV E V GI++ERDY RK++++GRSS +T V +IM+
Sbjct: 23 DDSVLDALKMLAEKNVGALPVV---ENNQVVGIVSERDYARKLVLKGRSSAATPVREIMS 79
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML 162
++TV P + M LMT L
Sbjct: 80 A--PVVTVEPKQNLEYCMNLMTNRHL 103
>gi|223938924|ref|ZP_03630810.1| putative signal transduction protein with CBS domains [bacterium
Ellin514]
gi|223892351|gb|EEF58826.1| putative signal transduction protein with CBS domains [bacterium
Ellin514]
Length = 149
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 11/107 (10%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
S TI IL KGK +W TVY+AV+ M + NVGAL+V+ E + G+ +
Sbjct: 4 SGTIDSILNYKGKQ-----IWSIQPFATVYEAVEKMAEKNVGALLVM---ENDRLVGMFS 55
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
ERDY RK+++ G+SS+ T V +I++ +I+V PD V AM++MT
Sbjct: 56 ERDYTRKVVLHGKSSRQTLVREIISR--PVISVDPDCSVEEAMRIMT 100
>gi|284107508|ref|ZP_06386389.1| signal-transduction protein with CBS domains [Candidatus
Poribacteria sp. WGA-A3]
gi|283829934|gb|EFC34215.1| signal-transduction protein with CBS domains [Candidatus
Poribacteria sp. WGA-A3]
Length = 144
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 66/103 (64%), Gaps = 11/103 (10%)
Query: 59 ILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
ILK KG S +W D+TVY A++ M + +GAL+V+ GE+ V GI +ERDY R
Sbjct: 7 ILKNKG-----SSVWSIGPDETVYKALQMMAEKEIGALLVLD-GEK--VVGIFSERDYAR 58
Query: 118 KIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
K+I+QGRSS +TK+ ++M + +I SPD + +M +MT +
Sbjct: 59 KVILQGRSSANTKISELMIRD--VIYGSPDDPIQESMAIMTAN 99
>gi|407710796|ref|YP_006794660.1| hypothetical protein BUPH_06076 [Burkholderia phenoliruptrix
BR3459a]
gi|407239479|gb|AFT89677.1| CBS domain-containing protein [Burkholderia phenoliruptrix BR3459a]
Length = 147
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 7/105 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT++ +LK K + DD+VY+A+K M +GALVV E ++AGI+TER
Sbjct: 2 TTVAQLLKTKPNHT--TVFTIGADDSVYEAIKLMADKGIGALVVT---EGDTIAGIVTER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
DY RK+++ RSSK+T V +IM++ + V PD M LMT
Sbjct: 57 DYARKVVLMDRSSKATPVREIMSKAVRF--VRPDQTTDDCMALMT 99
>gi|338213210|ref|YP_004657265.1| signal transduction protein with CBS domains [Runella slithyformis
DSM 19594]
gi|336307031|gb|AEI50133.1| putative signal transduction protein with CBS domains [Runella
slithyformis DSM 19594]
Length = 146
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 66/103 (64%), Gaps = 8/103 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I ++L+ K + A T + TV DA+K M N+GA++V++ G+ +AGI +ERDY
Sbjct: 3 IKNVLRDKTRNA---IFSVTPETTVLDALKQMADKNIGAVLVLEEGK---LAGIFSERDY 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
RK I+QGR+S T + ++MT KLITV+ + K+ AM +M+
Sbjct: 57 ARKGILQGRASNQTLIKEVMTA--KLITVTSEQKLEEAMVIMS 97
>gi|386009867|ref|YP_005928144.1| hypothetical protein PPUBIRD1_0233 [Pseudomonas putida BIRD-1]
gi|313496573|gb|ADR57939.1| CBS domain-containing protein [Pseudomonas putida BIRD-1]
Length = 145
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 5/86 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DD+V DA+K + + NVGAL VV+ G+ V GI++ERDY RK++++GRSS +T V +IM+
Sbjct: 23 DDSVLDALKLLAEKNVGALPVVEGGQ---VVGIVSERDYARKLVLKGRSSAATPVREIMS 79
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML 162
++TV P K+ M LMT L
Sbjct: 80 A--PVVTVEPKQKLDFCMNLMTDRHL 103
>gi|344338506|ref|ZP_08769438.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
gi|343801788|gb|EGV19730.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
Length = 143
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 60/94 (63%), Gaps = 6/94 (6%)
Query: 66 GADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124
G GS +W D +VYDA+ M + +GAL+V+ G ++ G+I+ERDY R +I++GR
Sbjct: 9 GDKGSQVWSIGPDASVYDALVLMAEKQIGALLVMDDG---AMIGLISERDYARSVILRGR 65
Query: 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+SK T V D+MTE +++ P+ + AM LMT
Sbjct: 66 TSKETLVSDVMTE--RVVCTQPEQTLEEAMALMT 97
>gi|46199936|ref|YP_005603.1| inosine-5'-monophosphate dehydrogenase [Thermus thermophilus HB27]
gi|55980318|ref|YP_143615.1| hypothetical protein TTHA0349 [Thermus thermophilus HB8]
gi|46197563|gb|AAS81976.1| inosine-5'-monophosphate dehydrogenase [Thermus thermophilus HB27]
gi|55771731|dbj|BAD70172.1| CBS domain protein [Thermus thermophilus HB8]
Length = 143
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 9/104 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G + TV DA++ + +H++GAL+V+ E + + GI TERD
Sbjct: 2 TVRQVLVHKGGGVHA----IHPEATVLDALRKLAEHDIGALLVM---EGERLLGIFTERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK+++ GR SK TKV ++MT + TV+P+ + AM+LMT
Sbjct: 55 YARKLVLLGRFSKDTKVREVMT--TDVPTVAPEASLEEAMRLMT 96
>gi|390568013|ref|ZP_10248325.1| signal-transduction protein [Burkholderia terrae BS001]
gi|389940016|gb|EIN01833.1| signal-transduction protein [Burkholderia terrae BS001]
Length = 144
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 61/105 (58%), Gaps = 8/105 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++ +LK+K D+VY+A+K M +GAL+V + G S+AGI+TER
Sbjct: 2 TSVAQVLKSKPTQ---EVYTIEASDSVYNAIKLMADKQIGALIVKENG---SIAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
DY RKI++ RSSK+T V DIM+ + V PD M LMT
Sbjct: 56 DYARKIVLMDRSSKTTPVRDIMSSAVRF--VRPDQTTDECMALMT 98
>gi|398848487|ref|ZP_10605300.1| CBS domain-containing protein [Pseudomonas sp. GM84]
gi|398248217|gb|EJN33640.1| CBS domain-containing protein [Pseudomonas sp. GM84]
Length = 145
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 7/108 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+ +ILK K + + DD+V DA+K + + NVGAL VV E V GI++ERD
Sbjct: 3 NVEEILKTKSQHQ--TVYTIGPDDSVLDALKLLAEKNVGALPVV---ENNQVVGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
Y RK++++GRSS +T V +IM+ ++TV P + M LMT L
Sbjct: 58 YARKLVLKGRSSAATPVREIMSA--PVVTVEPRQNLEYCMNLMTDRHL 103
>gi|104779464|ref|YP_605962.1| hypothetical protein PSEEN0171 [Pseudomonas entomophila L48]
gi|95108451|emb|CAK13145.1| conserved hypothetical protein; CBS domain protein [Pseudomonas
entomophila L48]
Length = 145
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 5/100 (5%)
Query: 63 KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122
K K + DD+V DA+K + + N+GAL VV E V GI++ERDY RK++++
Sbjct: 9 KNKSQPQAVYTIAPDDSVLDALKMLAEKNIGALPVV---ENDQVVGIVSERDYARKLVLK 65
Query: 123 GRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
GRSS T V +IM+ + ++TV P + M LMT L
Sbjct: 66 GRSSPFTTVREIMS--SPVVTVDPKQNLEYCMNLMTNRHL 103
>gi|91778034|ref|YP_553242.1| hypothetical protein Bxe_B2095 [Burkholderia xenovorans LB400]
gi|91690694|gb|ABE33892.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
Length = 164
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 72 LWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
+W T +VYDA+ M VGAL+V G +AGI+TERDY RKI++ RSS+ T
Sbjct: 16 VWSTQASASVYDAIAVMAHRQVGALIVAHEGR---IAGIVTERDYARKIVLMDRSSRHTP 72
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
V DIM+ + I PD M LMT H + LP
Sbjct: 73 VRDIMSTAVRYI--GPDQTTEECMALMTEHRIRYLP 106
>gi|390572107|ref|ZP_10252332.1| hypothetical protein WQE_27120 [Burkholderia terrae BS001]
gi|389935895|gb|EIM97798.1| hypothetical protein WQE_27120 [Burkholderia terrae BS001]
Length = 160
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 63/113 (55%), Gaps = 12/113 (10%)
Query: 55 TISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
+++ L++K D +W T +VYDA+ M VGAL+V G +AGI+TER
Sbjct: 3 SVAQFLRSK----DSQTVWSTHASASVYDAIAIMAHRQVGALIVANEGR---LAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RKI++ RSS++T V DIM+ E + V P M LMT H + LP
Sbjct: 56 DYARKIVLMDRSSRNTPVRDIMSTEVR--HVGPQHTTDECMALMTEHRIRYLP 106
>gi|336322612|ref|YP_004602579.1| putative signal transduction protein with CBS domains [Flexistipes
sinusarabici DSM 4947]
gi|336106193|gb|AEI14011.1| putative signal transduction protein with CBS domains [Flexistipes
sinusarabici DSM 4947]
Length = 146
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 64/105 (60%), Gaps = 9/105 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
+T+ DIL K + + + TV++A+K M+ ++GAL+V E +V GI +ER
Sbjct: 2 STVKDILSKK----ESQVYTVSPEKTVFEALKIMSDEDIGALIVT---EGDNVKGIFSER 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
DY RK+I++G+SSK KV DIMT + ++ V+P V M LMT
Sbjct: 55 DYARKVILKGKSSKDLKVSDIMTTD--VLFVTPKNTVEECMALMT 97
>gi|409397204|ref|ZP_11248142.1| hypothetical protein C211_17130 [Pseudomonas sp. Chol1]
gi|409118364|gb|EKM94764.1| hypothetical protein C211_17130 [Pseudomonas sp. Chol1]
Length = 145
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+D+V+DA+K M + NVGAL V + + GI++ERDY RKI++QGRSS T V IMT
Sbjct: 22 EDSVFDALKLMAEKNVGALPVADASGR--LVGIVSERDYARKIVLQGRSSFVTPVSAIMT 79
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+K+ITV P + M++MT
Sbjct: 80 --SKVITVEPRQSIRECMEIMT 99
>gi|170696511|ref|ZP_02887635.1| putative signal-transduction protein with CBS domains [Burkholderia
graminis C4D1M]
gi|170138558|gb|EDT06762.1| putative signal-transduction protein with CBS domains [Burkholderia
graminis C4D1M]
Length = 146
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 8/105 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT++ +LK K + + DD+VY+A++ M +GALVV + S+AGIITER
Sbjct: 2 TTVAQLLKTK---PNTTVYTIGADDSVYEAIRLMADKGIGALVVT---DGDSIAGIITER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
DY RK+++ RSSK+T V +IM++ + V PD M LMT
Sbjct: 56 DYARKVVLMDRSSKATPVREIMSKAVRF--VRPDQTTDDCMALMT 98
>gi|281202067|gb|EFA76272.1| hypothetical protein PPL_10033 [Polysphondylium pallidum PN500]
Length = 240
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
Query: 42 SSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPG 101
+ R GF T + ++L K +G + + DTV++A+++M +H VGALVVV
Sbjct: 74 AKERRHTAGFVDTKVMELLSNKPRGYQ-NIIKVKEGDTVFNAIQTMQKHKVGALVVV--D 130
Query: 102 EQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
+ + GI +ERDY+ +I+V+ SS++T + D+M+ ++TV DT + M +M
Sbjct: 131 AENRMTGIFSERDYMNRIVVKDLSSRTTYIKDVMSPH--VVTVRTDTSTAKCMSIM 184
>gi|408674029|ref|YP_006873777.1| putative signal transduction protein with CBS domains [Emticicia
oligotrophica DSM 17448]
gi|387855653|gb|AFK03750.1| putative signal transduction protein with CBS domains [Emticicia
oligotrophica DSM 17448]
Length = 145
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 62/103 (60%), Gaps = 8/103 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I IL+ K A T+ TVYDA+ M N+GA++V+ G+ ++GI +ERDY
Sbjct: 3 IRQILQGKKINA---LFSVTSSTTVYDALVEMADKNIGAVLVIDEGK---LSGIFSERDY 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
RKI+++GR S T V D+MT +ITV + K+ AMQ+M+
Sbjct: 57 ARKIVLKGRHSDDTPVSDVMTA--NVITVEMEDKLEMAMQIMS 97
>gi|381206976|ref|ZP_09914047.1| signal-transduction protein with cbs domains [SAR324 cluster
bacterium JCVI-SC AAA005]
Length = 143
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 5/86 (5%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T D +V+DA+K M + N+GA++V+ E + + GI +ERDY RK+I+ GRSSK T+V ++
Sbjct: 19 TPDTSVFDALKVMNEKNIGAVLVM---EDEELVGIFSERDYARKVILAGRSSKITEVKEL 75
Query: 135 MTEENKLITVSPDTKVLRAMQLMTGH 160
MT K+ + P + M+LM H
Sbjct: 76 MT--CKVYCIDPSRTIQDVMELMNEH 99
>gi|440730614|ref|ZP_20910694.1| signal-transduction protein with cbs domain [Xanthomonas
translucens DAR61454]
gi|440378204|gb|ELQ14832.1| signal-transduction protein with cbs domain [Xanthomonas
translucens DAR61454]
Length = 142
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 62/106 (58%), Gaps = 9/106 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G D V DA++ M +GA++V++ G +AGI++ERD
Sbjct: 3 TVRQLLGDKG----GEIHAVAPDAAVVDALRLMADKGIGAVLVMQDGR---LAGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
Y RK+++Q RSS +T V DIM+ K+ TV P V + M+LMTG
Sbjct: 56 YARKVVLQDRSSATTPVRDIMS--TKVYTVDPSQSVQQCMELMTGQ 99
>gi|339485118|ref|YP_004699646.1| hypothetical protein PPS_0177 [Pseudomonas putida S16]
gi|338835961|gb|AEJ10766.1| CBS domain-containing protein [Pseudomonas putida S16]
Length = 145
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DD+V DA+K + + NVGAL VV E V GI++ERDY RK++++GRSS +T V +IM+
Sbjct: 23 DDSVLDALKLLAEKNVGALPVV---EGNQVVGIVSERDYARKLVLKGRSSAATPVREIMS 79
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML 162
++TV P + M LMT L
Sbjct: 80 A--PVVTVEPKQNLEYCMNLMTNRHL 103
>gi|420254612|ref|ZP_14757606.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. BT03]
gi|398048356|gb|EJL40830.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. BT03]
Length = 144
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 8/105 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++ +LK+K D+VY+A+K M +GAL+V + G ++AGI+TER
Sbjct: 2 TSVAQVLKSKPTQ---EVYTIEASDSVYNAIKLMADKQIGALIVKENG---AIAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
DY RKI++ RSSK+T V DIM+ + V PD M LMT
Sbjct: 56 DYARKIVLMDRSSKTTPVRDIMSSAVRF--VRPDQTTDECMALMT 98
>gi|307727770|ref|YP_003910983.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1003]
gi|307588295|gb|ADN61692.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1003]
Length = 147
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 7/105 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT++ +LK K + DD+VY+A++ M +GALVV + S+AGI+TER
Sbjct: 2 TTVAQLLKTKPNHT--TVFTIGADDSVYEAIRLMADKGIGALVVT---DGDSIAGIVTER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
DY RK+++ RSSK+T V +IM++ + V PD M LMT
Sbjct: 57 DYARKVVLMDRSSKATPVREIMSKAVRF--VRPDQTTDDCMALMT 99
>gi|386359497|ref|YP_006057742.1| signal transduction protein [Thermus thermophilus JL-18]
gi|383508524|gb|AFH37956.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Thermus thermophilus JL-18]
Length = 143
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 9/104 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G + TV DA++ + +H++GAL+V+ E + GI TERD
Sbjct: 2 TVRQVLVHKGGGVHA----IHPEATVLDALRKLAEHDIGALLVM---EGDRLLGIFTERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK+++ GR SK TKV ++MT + TV+P+ + AM+LMT
Sbjct: 55 YARKLVLLGRFSKDTKVREVMT--TDVPTVAPEASLEEAMRLMT 96
>gi|71906263|ref|YP_283850.1| CBS [Dechloromonas aromatica RCB]
gi|71845884|gb|AAZ45380.1| CBS protein [Dechloromonas aromatica RCB]
Length = 143
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 56/81 (69%), Gaps = 5/81 (6%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
DTVY A+ M QH VGAL+V+ GEQ + GI +ERDY RKII+QG++SK T V +IM+
Sbjct: 22 DTVYHALTVMAQHEVGALLVLD-GEQ--LVGIFSERDYARKIILQGKTSKETLVREIMS- 77
Query: 138 ENKLITVSPDTKVLRAMQLMT 158
+++ V+P + + M LMT
Sbjct: 78 -DRVAYVTPGSTLDECMALMT 97
>gi|311107598|ref|YP_003980451.1| hypothetical protein AXYL_04417 [Achromobacter xylosoxidans A8]
gi|310762287|gb|ADP17736.1| CBS domain pair family protein 3 [Achromobacter xylosoxidans A8]
Length = 146
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 61/83 (73%), Gaps = 6/83 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+++IL+ K A+ S + + D +V++AVK M + ++GA+VVV+ +V G++TERD
Sbjct: 3 TVAEILREK---ANHSVVTVSPDASVFEAVKIMAERSIGAVVVVQG---DAVLGMLTERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTE 137
Y RKI++Q RSS++TKV DIMT+
Sbjct: 57 YARKIVLQDRSSRTTKVRDIMTD 79
>gi|440738083|ref|ZP_20917628.1| hypothetical protein A986_07475 [Pseudomonas fluorescens BRIP34879]
gi|447916261|ref|YP_007396829.1| hypothetical protein H045_06295 [Pseudomonas poae RE*1-1-14]
gi|440381426|gb|ELQ17958.1| hypothetical protein A986_07475 [Pseudomonas fluorescens BRIP34879]
gi|445200124|gb|AGE25333.1| hypothetical protein H045_06295 [Pseudomonas poae RE*1-1-14]
Length = 146
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 67/106 (63%), Gaps = 10/106 (9%)
Query: 55 TISDILKAKGKGADG--SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
T++ +LKAK + + W D TV++A+ M++ NVGAL VVK G +V GII+E
Sbjct: 3 TVAQLLKAKDQKHHDVHTIQW---DHTVFEALVRMSEKNVGALPVVKDG---AVVGIISE 56
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
RDY RK+I++G SS +T+V +M+ + +ITV P V M +MT
Sbjct: 57 RDYARKLILKGLSSVTTRVDQVMS--SPVITVEPHKSVDECMNIMT 100
>gi|83815791|ref|YP_446387.1| hypothetical protein SRU_2283 [Salinibacter ruber DSM 13855]
gi|294508324|ref|YP_003572382.1| hypothetical protein SRM_02509 [Salinibacter ruber M8]
gi|83757185|gb|ABC45298.1| CBS domain pair, putative [Salinibacter ruber DSM 13855]
gi|294344652|emb|CBH25430.1| putative CBS domain protein [Salinibacter ruber M8]
Length = 160
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 69/110 (62%), Gaps = 6/110 (5%)
Query: 50 GFESTTISDILKAKGKGAD-GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAG 108
G T + DI+++K AD G+ L + TV++ + M +VG++VV+ E ++AG
Sbjct: 6 GLLDTRVKDIIQSKSALADDGNVLTTSPTATVFECIGRMVDRDVGSIVVM---EGDAIAG 62
Query: 109 IITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ TER+Y++ I ++GRSS T+V ++MTE+ + TV PD + ++LMT
Sbjct: 63 LFTERNYMQSIALEGRSSDETEVQEVMTED--VATVRPDKPLEECLRLMT 110
>gi|385204300|ref|ZP_10031170.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
gi|385184191|gb|EIF33465.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
Length = 164
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 10/112 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+++ +L++K S C + VYDA+ M VGAL+V G +AGI+TERD
Sbjct: 3 SVAQLLRSKASQRVWSTQACAS---VYDAIAVMAHRRVGALIVAHEGR---IAGIVTERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
Y RKI++ RSS+ T V DIM+ + VSPD M LMT + + LP
Sbjct: 57 YARKIVLMDRSSRHTPVRDIMSTAVRY--VSPDQTTEECMALMTEYRIRYLP 106
>gi|424793987|ref|ZP_18220021.1| hypothetical protein XTG29_02321 [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422796231|gb|EKU24777.1| hypothetical protein XTG29_02321 [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 142
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 62/106 (58%), Gaps = 9/106 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G D V DA++ M +GA++V++ G +AGI++ERD
Sbjct: 3 TVRQLLGDKG----GEIHAVAPDAAVVDALRLMADKGIGAVLVMQDGR---LAGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
Y RK+++Q RSS +T V DIM+ K+ TV P V + M+LMTG
Sbjct: 56 YARKVVLQDRSSATTPVRDIMS--AKVYTVDPSQSVQQCMELMTGQ 99
>gi|323529966|ref|YP_004232118.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1001]
gi|323386968|gb|ADX59058.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1001]
Length = 147
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 7/105 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT++ +LK K + DD+VY+A+K M +GALVV + ++AGI+TER
Sbjct: 2 TTVAQLLKTKPNHT--TVFTIGADDSVYEAIKLMADKGIGALVVT---DGDTIAGIVTER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
DY RK+++ RSSK+T V +IM++ + V PD M LMT
Sbjct: 57 DYARKVVLMDRSSKATPVREIMSKAVRF--VRPDQTTDDCMALMT 99
>gi|83816083|ref|YP_446538.1| hypothetical protein SRU_2439 [Salinibacter ruber DSM 13855]
gi|83757477|gb|ABC45590.1| CBS domain pair protein [Salinibacter ruber DSM 13855]
Length = 229
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 67/112 (59%), Gaps = 6/112 (5%)
Query: 47 EEHGFESTTISDILKAKGKGADGSW-LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKS 105
+E ++++ D+L+AKG D + L D+VYD + M + VG++VV G +
Sbjct: 68 DEPAIPNSSVEDVLEAKGALHDPTTVLTAAPQDSVYDCIDRMAEIGVGSIVVTADG---A 124
Query: 106 VAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
+AGI TERD++RK+ ++GR+ + T V +MTE+ + TV+P + A+ M
Sbjct: 125 IAGIFTERDHMRKMALEGRAPRDTAVQTVMTED--VATVTPAQSLEDALDRM 174
>gi|294508474|ref|YP_003572532.1| hypothetical protein SRM_02659 [Salinibacter ruber M8]
gi|294344802|emb|CBH25580.1| Conserved hypothetical protein containing CBS domain [Salinibacter
ruber M8]
Length = 237
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 67/112 (59%), Gaps = 6/112 (5%)
Query: 47 EEHGFESTTISDILKAKGKGADGSW-LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKS 105
+E ++++ D+L+AKG D + L D+VYD + M + VG++VV G +
Sbjct: 76 DEPAIPNSSVEDVLEAKGALHDPTTVLTAAPQDSVYDCIDRMAEIGVGSIVVTADG---A 132
Query: 106 VAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
+AGI TERD++RK+ ++GR+ + T V +MTE+ + TV+P + A+ M
Sbjct: 133 IAGIFTERDHMRKMALEGRAPRDTAVQTVMTED--VATVTPAQSLEDALDRM 182
>gi|389793525|ref|ZP_10196688.1| signal transduction protein [Rhodanobacter fulvus Jip2]
gi|388433739|gb|EIL90699.1| signal transduction protein [Rhodanobacter fulvus Jip2]
Length = 142
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 59/96 (61%), Gaps = 7/96 (7%)
Query: 63 KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122
+GKG D V +A+K M ++ +GAL+V++ ++ G+++ERDY RK+++Q
Sbjct: 9 EGKG--NKIFSIEPDVPVLEAIKRMAEYRIGALMVMR---GSALVGVMSERDYARKVLLQ 63
Query: 123 GRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
GRSS T V DIM+ ITVSPDT V M+L T
Sbjct: 64 GRSSSQTAVSDIMS--GTPITVSPDTDVFDCMRLCT 97
>gi|397688746|ref|YP_006526065.1| hypothetical protein PSJM300_18270 [Pseudomonas stutzeri DSM 10701]
gi|395810302|gb|AFN79707.1| hypothetical protein PSJM300_18270 [Pseudomonas stutzeri DSM 10701]
Length = 144
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 5/88 (5%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+++ TV + +++M +HNVGAL VV GE + GI++ERDY RKI++QGRSS T V I
Sbjct: 20 SSEATVLEFLQAMAEHNVGALPVVDDGE---LVGIVSERDYARKIVLQGRSSVGTPVSTI 76
Query: 135 MTEENKLITVSPDTKVLRAMQLMTGHML 162
M+ + +IT P + M LMT L
Sbjct: 77 MS--SPVITTEPQQSIQACMSLMTDRHL 102
>gi|118595092|ref|ZP_01552439.1| CBS [Methylophilales bacterium HTCC2181]
gi|118440870|gb|EAV47497.1| CBS [Methylophilales bacterium HTCC2181]
Length = 150
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 58/80 (72%), Gaps = 5/80 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+++DA+ M Q+ +GAL+V+K + + GII+ERDY R+I ++GRSS+ TKV +IMT+
Sbjct: 31 SIFDALTIMAQYKIGALIVMKGSK---MVGIISERDYAREIFIEGRSSRDTKVQEIMTK- 86
Query: 139 NKLITVSPDTKVLRAMQLMT 158
K++T+S D K + + +MT
Sbjct: 87 -KVLTLSADDKFDKGLDIMT 105
>gi|83716568|ref|YP_439711.1| hypothetical protein BTH_II1515 [Burkholderia thailandensis E264]
gi|167578151|ref|ZP_02371025.1| CBS domain protein [Burkholderia thailandensis TXDOH]
gi|167616282|ref|ZP_02384917.1| CBS domain protein [Burkholderia thailandensis Bt4]
gi|257142850|ref|ZP_05591112.1| CBS domain-containing protein [Burkholderia thailandensis E264]
gi|83650393|gb|ABC34457.1| CBS domain protein [Burkholderia thailandensis E264]
Length = 153
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 67/108 (62%), Gaps = 6/108 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
S T++ ILK+K + D+VY+A+K M + ++GAL+V+ + ++AGI+TE
Sbjct: 2 SLTVAQILKSKPDSG-RTIHMVEKSDSVYNAIKLMAEKSIGALLVM---DGANIAGIVTE 57
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
RDY RK+++ RSSK+T+V +IMT +K+ V P M LMT H
Sbjct: 58 RDYARKVVLLDRSSKATRVEEIMT--SKVRYVEPTQTSDECMALMTEH 103
>gi|301631324|ref|XP_002944748.1| PREDICTED: uncharacterized protein At5g10860, mitochondrial-like
[Xenopus (Silurana) tropicalis]
Length = 146
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 67/110 (60%), Gaps = 10/110 (9%)
Query: 54 TTISDILKAKGKGADGSWLWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
+ +SDILK+K + + C DD+V DA+K M + +GAL+V+ E +++ GI+TE
Sbjct: 2 SIVSDILKSKPS----NVIHCLAPDDSVLDALKLMAEKGIGALLVM---EGQAIVGIVTE 54
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
RDY RKI + GR+S +T V D+MT + ++ V P M +MT + L
Sbjct: 55 RDYARKIALLGRTSAATLVRDVMTRD--VLYVRPSQSSEECMAIMTSNRL 102
>gi|83814945|ref|YP_446606.1| hypothetical protein SRU_2508 [Salinibacter ruber DSM 13855]
gi|83756339|gb|ABC44452.1| CBS domain pair protein [Salinibacter ruber DSM 13855]
Length = 175
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 46 MEEHGFESTTISDILKAKGK-GADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQK 104
M+E T + D+L+ KG +G L T DTVY+ + +M +G++V+ + E
Sbjct: 16 MDERELVETRVRDVLRTKGTLQQNGDVLTATPTDTVYECIDAMVDRGIGSIVITEDDE-- 73
Query: 105 SVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+ GI TERDY+R I ++GRSS T+V ++MTE+
Sbjct: 74 -MVGIFTERDYMRDIALKGRSSPETEVQEVMTED 106
>gi|423096128|ref|ZP_17083924.1| CBS domain protein [Pseudomonas fluorescens Q2-87]
gi|397887608|gb|EJL04091.1| CBS domain protein [Pseudomonas fluorescens Q2-87]
Length = 129
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 53/84 (63%), Gaps = 5/84 (5%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+ DD V A+ M + NVGAL+VVK E V GII+ERDY RK+++ GRSS TKV DI
Sbjct: 5 SPDDMVLQALMRMAEKNVGALLVVKNDE---VLGIISERDYARKMVLHGRSSVGTKVSDI 61
Query: 135 MTEENKLITVSPDTKVLRAMQLMT 158
M + +IT+ P V + +MT
Sbjct: 62 MV--SPVITIDPHQNVETCLSIMT 83
>gi|253997459|ref|YP_003049523.1| putative signal transduction protein [Methylotenera mobilis JLW8]
gi|253984138|gb|ACT48996.1| putative signal transduction protein with CBS domains
[Methylotenera mobilis JLW8]
Length = 143
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 58/81 (71%), Gaps = 5/81 (6%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
V+DA+ + ++ +GAL+V+ E +S+ GI +ERDY R++I++GRSSK+T + ++MT +
Sbjct: 25 VFDALVVLAEYKIGALIVL---EGQSLVGIFSERDYAREVILKGRSSKTTSIHEVMT--S 79
Query: 140 KLITVSPDTKVLRAMQLMTGH 160
K++T +P V A+ LMT H
Sbjct: 80 KVLTATPSDSVEYALSLMTEH 100
>gi|260219992|emb|CBA27084.1| Uncharacterized protein At5g10860, mitochondrial [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 164
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 6/91 (6%)
Query: 69 GSWLW-CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127
G +W DD+VY A++ + NVGAL+V+ + + GI +ERDY RKI + GRSSK
Sbjct: 34 GGSVWSLNPDDSVYQALEMLADCNVGALMVM---DGDKLVGIFSERDYTRKIALSGRSSK 90
Query: 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
TKV DIMT ++++ V P T+ M LM+
Sbjct: 91 DTKVKDIMT--SQVMVVGPKTRTQECMALMS 119
>gi|388544286|ref|ZP_10147574.1| hypothetical protein PMM47T1_07876 [Pseudomonas sp. M47T1]
gi|388277469|gb|EIK97043.1| hypothetical protein PMM47T1_07876 [Pseudomonas sp. M47T1]
Length = 146
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 7/108 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++++LK K + + D V +A++ M + NVGAL V+K G +V GI++ERD
Sbjct: 3 TVAELLKLKAQ-HNQQVHTIGPDQMVVEALRLMAEKNVGALPVIKDG---AVVGIVSERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT-GHM 161
Y RK+++ GRSS T V +IM+ K+ITV P + M +MT GH+
Sbjct: 59 YARKVVLLGRSSVGTPVSEIMSA--KVITVDPHKNIDTCMNMMTDGHL 104
>gi|330808646|ref|YP_004353108.1| hypothetical protein PSEBR_a1884 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423696482|ref|ZP_17670972.1| CBS domain protein [Pseudomonas fluorescens Q8r1-96]
gi|327376754|gb|AEA68104.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388003923|gb|EIK65250.1| CBS domain protein [Pseudomonas fluorescens Q8r1-96]
Length = 146
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 5/84 (5%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+ DD V A+ M + NVGAL+VVK E V GII+ERDY RK++++GRSS TKV DI
Sbjct: 22 SPDDMVLQALMRMAEKNVGALLVVKNDE---VLGIISERDYARKMVLRGRSSVGTKVSDI 78
Query: 135 MTEENKLITVSPDTKVLRAMQLMT 158
M + +IT+ P V + +MT
Sbjct: 79 MV--SPVITIDPHQNVETCLSIMT 100
>gi|284036381|ref|YP_003386311.1| signal transduction protein with CBS domains [Spirosoma linguale
DSM 74]
gi|283815674|gb|ADB37512.1| putative signal transduction protein with CBS domains [Spirosoma
linguale DSM 74]
Length = 145
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 5/85 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
++D TV D +K M + N+GAL+VV GE + GI +ERDY RK+I++ R S T++ D
Sbjct: 18 VSSDQTVLDGLKVMAEKNIGALLVVDNGE---LTGIFSERDYARKVILKDRHSDDTRIAD 74
Query: 134 IMTEENKLITVSPDTKVLRAMQLMT 158
+MT +IT+ PD + M +M+
Sbjct: 75 VMTA--NVITIGPDQSLEEGMVIMS 97
>gi|378951751|ref|YP_005209239.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas fluorescens
F113]
gi|359761765|gb|AEV63844.1| Inosine-5'-monophosphate dehydrogenase [Pseudomonas fluorescens
F113]
Length = 146
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 6/104 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L+ K + + + DD V A+ M + NVGAL+VVK E V GII+ERD
Sbjct: 3 TVAQLLRIKDE-KNQQVHTISPDDMVLQALMRMAEKNVGALLVVKNEE---VLGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK++++GRSS TKV DIM + +IT+ P V + +MT
Sbjct: 59 YARKMVLRGRSSVGTKVSDIMV--SPVITIDPHQNVETCLSIMT 100
>gi|433679996|ref|ZP_20511656.1| Inosine-5'-monophosphate dehydrogenase Short=IMP dehydrogenase
[Xanthomonas translucens pv. translucens DSM 18974]
gi|430814905|emb|CCP42287.1| Inosine-5'-monophosphate dehydrogenase [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 142
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 9/106 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G D V DA++ M +GA++V+ G +AGI++ERD
Sbjct: 3 TVRQLLGDKG----GEIHAVAPDAAVVDALRLMADKGIGAVLVMHDGR---LAGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
Y RK+++Q RSS +T V DIM+ K+ TV P V + M+LMTG
Sbjct: 56 YARKVVLQDRSSATTPVRDIMS--AKVYTVDPSQSVQQCMELMTGQ 99
>gi|388469324|ref|ZP_10143533.1| CBS domain protein [Pseudomonas synxantha BG33R]
gi|388006021|gb|EIK67287.1| CBS domain protein [Pseudomonas synxantha BG33R]
Length = 146
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 67/106 (63%), Gaps = 10/106 (9%)
Query: 55 TISDILKAKG-KGADGSWL-WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
T++ +LKAK K D + W D TV++A+ M++ NVGAL VVK G V GII+E
Sbjct: 3 TVAQLLKAKDQKNQDVHTIQW---DHTVFEALVRMSEKNVGALPVVKEG---VVVGIISE 56
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
RDY RK+I++G SS +T+V D+M+ + +ITV V M +MT
Sbjct: 57 RDYARKLILKGLSSVTTRVDDVMS--SPVITVDTHKSVEECMNIMT 100
>gi|53717172|ref|YP_105966.1| hypothetical protein BMAA1350 [Burkholderia mallei ATCC 23344]
gi|53721906|ref|YP_110891.1| hypothetical protein BPSS0882 [Burkholderia pseudomallei K96243]
gi|67643288|ref|ZP_00442035.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
gi|76818563|ref|YP_337630.1| hypothetical protein BURPS1710b_A2480 [Burkholderia pseudomallei
1710b]
gi|121597823|ref|YP_989945.1| hypothetical protein BMASAVP1_0334 [Burkholderia mallei SAVP1]
gi|124381836|ref|YP_001024428.1| hypothetical protein BMA10229_0612 [Burkholderia mallei NCTC 10229]
gi|126443222|ref|YP_001062287.1| CBS domain-containing protein [Burkholderia pseudomallei 668]
gi|126445993|ref|YP_001078149.1| CBS domain-containing protein [Burkholderia mallei NCTC 10247]
gi|126457700|ref|YP_001075253.1| CBS domain-containing protein [Burkholderia pseudomallei 1106a]
gi|134278834|ref|ZP_01765547.1| CBS domain protein [Burkholderia pseudomallei 305]
gi|167000166|ref|ZP_02265986.1| CBS domain protein [Burkholderia mallei PRL-20]
gi|167723227|ref|ZP_02406463.1| CBS domain protein [Burkholderia pseudomallei DM98]
gi|167742198|ref|ZP_02414972.1| CBS domain protein [Burkholderia pseudomallei 14]
gi|167819373|ref|ZP_02451053.1| CBS domain protein [Burkholderia pseudomallei 91]
gi|167827746|ref|ZP_02459217.1| CBS domain protein [Burkholderia pseudomallei 9]
gi|167849220|ref|ZP_02474728.1| CBS domain protein [Burkholderia pseudomallei B7210]
gi|167897818|ref|ZP_02485220.1| CBS domain protein [Burkholderia pseudomallei 7894]
gi|167906163|ref|ZP_02493368.1| CBS domain protein [Burkholderia pseudomallei NCTC 13177]
gi|167914486|ref|ZP_02501577.1| CBS domain protein [Burkholderia pseudomallei 112]
gi|167922385|ref|ZP_02509476.1| CBS domain protein [Burkholderia pseudomallei BCC215]
gi|217418559|ref|ZP_03450066.1| CBS domain protein [Burkholderia pseudomallei 576]
gi|226197756|ref|ZP_03793331.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
gi|237509954|ref|ZP_04522669.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
gi|242313105|ref|ZP_04812122.1| CBS domain protein [Burkholderia pseudomallei 1106b]
gi|254174393|ref|ZP_04881055.1| CBS domain protein [Burkholderia mallei ATCC 10399]
gi|254183336|ref|ZP_04889928.1| CBS domain protein [Burkholderia pseudomallei 1655]
gi|254189969|ref|ZP_04896478.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|254193127|ref|ZP_04899562.1| CBS domain protein [Burkholderia pseudomallei S13]
gi|254200811|ref|ZP_04907176.1| CBS domain protein [Burkholderia mallei FMH]
gi|254204781|ref|ZP_04911134.1| CBS domain protein [Burkholderia mallei JHU]
gi|254263370|ref|ZP_04954235.1| CBS domain protein [Burkholderia pseudomallei 1710a]
gi|254300236|ref|ZP_04967682.1| CBS domain protein [Burkholderia pseudomallei 406e]
gi|254357030|ref|ZP_04973305.1| CBS domain protein [Burkholderia mallei 2002721280]
gi|386864670|ref|YP_006277618.1| hypothetical protein BP1026B_II0968 [Burkholderia pseudomallei
1026b]
gi|403522515|ref|YP_006658084.1| hypothetical protein BPC006_II1233 [Burkholderia pseudomallei
BPC006]
gi|418395944|ref|ZP_12969846.1| CBS domain-containing protein [Burkholderia pseudomallei 354a]
gi|418535801|ref|ZP_13101538.1| CBS domain-containing protein [Burkholderia pseudomallei 1026a]
gi|418543432|ref|ZP_13108789.1| CBS domain-containing protein [Burkholderia pseudomallei 1258a]
gi|418549968|ref|ZP_13114976.1| CBS domain-containing protein [Burkholderia pseudomallei 1258b]
gi|418555654|ref|ZP_13120344.1| CBS domain-containing protein [Burkholderia pseudomallei 354e]
gi|52212320|emb|CAH38344.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
gi|52423142|gb|AAU46712.1| CBS domain protein [Burkholderia mallei ATCC 23344]
gi|76583036|gb|ABA52510.1| CBS domain protein [Burkholderia pseudomallei 1710b]
gi|121225621|gb|ABM49152.1| CBS domain protein [Burkholderia mallei SAVP1]
gi|124289856|gb|ABM99125.1| CBS domain protein [Burkholderia mallei NCTC 10229]
gi|126222713|gb|ABN86218.1| CBS domain protein [Burkholderia pseudomallei 668]
gi|126231468|gb|ABN94881.1| CBS domain protein [Burkholderia pseudomallei 1106a]
gi|126238847|gb|ABO01959.1| CBS domain protein [Burkholderia mallei NCTC 10247]
gi|134249253|gb|EBA49334.1| CBS domain protein [Burkholderia pseudomallei 305]
gi|147748423|gb|EDK55498.1| CBS domain protein [Burkholderia mallei FMH]
gi|147754367|gb|EDK61431.1| CBS domain protein [Burkholderia mallei JHU]
gi|148026057|gb|EDK84180.1| CBS domain protein [Burkholderia mallei 2002721280]
gi|157809884|gb|EDO87054.1| CBS domain protein [Burkholderia pseudomallei 406e]
gi|157937646|gb|EDO93316.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|160695439|gb|EDP85409.1| CBS domain protein [Burkholderia mallei ATCC 10399]
gi|169649881|gb|EDS82574.1| CBS domain protein [Burkholderia pseudomallei S13]
gi|184213869|gb|EDU10912.1| CBS domain protein [Burkholderia pseudomallei 1655]
gi|217397863|gb|EEC37878.1| CBS domain protein [Burkholderia pseudomallei 576]
gi|225930365|gb|EEH26377.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
gi|235002159|gb|EEP51583.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
gi|238524599|gb|EEP88031.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
gi|242136344|gb|EES22747.1| CBS domain protein [Burkholderia pseudomallei 1106b]
gi|243063818|gb|EES46004.1| CBS domain protein [Burkholderia mallei PRL-20]
gi|254214372|gb|EET03757.1| CBS domain protein [Burkholderia pseudomallei 1710a]
gi|385352840|gb|EIF59227.1| CBS domain-containing protein [Burkholderia pseudomallei 1258a]
gi|385353208|gb|EIF59569.1| CBS domain-containing protein [Burkholderia pseudomallei 1258b]
gi|385354522|gb|EIF60786.1| CBS domain-containing protein [Burkholderia pseudomallei 1026a]
gi|385368339|gb|EIF73796.1| CBS domain-containing protein [Burkholderia pseudomallei 354e]
gi|385373249|gb|EIF78304.1| CBS domain-containing protein [Burkholderia pseudomallei 354a]
gi|385661798|gb|AFI69220.1| CBS domain-containing protein [Burkholderia pseudomallei 1026b]
gi|403077582|gb|AFR19161.1| CBS domain-containing protein [Burkholderia pseudomallei BPC006]
Length = 154
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 67/108 (62%), Gaps = 6/108 (5%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
S T++ IL++K + D+VY+A+K M + ++GAL+V+ + ++AGI+TE
Sbjct: 2 SLTVAQILRSKPDSG-RTIHMVEKSDSVYNAIKLMAEKSIGALLVM---DGANIAGIVTE 57
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
RDY RK+++ RSSK+T+V +IMT +K+ V P M LMT H
Sbjct: 58 RDYARKVVLLDRSSKATRVEEIMT--SKVRYVEPTQTSDECMALMTEH 103
>gi|395650715|ref|ZP_10438565.1| hypothetical protein Pext1s1_19137 [Pseudomonas extremaustralis
14-3 substr. 14-3b]
Length = 146
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 68/106 (64%), Gaps = 10/106 (9%)
Query: 55 TISDILKAKG-KGADGSWL-WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
T++++LKAK K + + W D TV++A+ M+ NVGAL VVK GE V GII+E
Sbjct: 3 TVAEVLKAKDLKNQEVHTIEW---DHTVFEALVVMSSKNVGALPVVKHGE---VVGIISE 56
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
RDY RK+I++G SS +TKV ++M+ +ITV+ + M +MT
Sbjct: 57 RDYARKLILKGLSSVTTKVHEVMS--APVITVNAHKTIEECMNIMT 100
>gi|425745537|ref|ZP_18863581.1| CBS domain protein [Acinetobacter baumannii WC-323]
gi|425488545|gb|EKU54880.1| CBS domain protein [Acinetobacter baumannii WC-323]
Length = 143
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A S + + TV +A+K M + VGALVV E + V GI +ER
Sbjct: 2 TIVAQVIKNK---AVQSIFTISPNATVLEAIKIMAEKGVGALVV---AEDEKVVGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RKI + RSS +T V DIMT +K+I+VS + V +QLMT L LP
Sbjct: 56 DYTRKIALMERSSNNTPVADIMT--SKVISVSLNHTVEECLQLMTDRHLRHLP 106
>gi|399033777|ref|ZP_10732321.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Flavobacterium sp. CF136]
gi|398067844|gb|EJL59317.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Flavobacterium sp. CF136]
Length = 141
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 64/104 (61%), Gaps = 9/104 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ IL AKGK S L TT VY+A+K M + N+GA++V+ E K GI++ERD
Sbjct: 2 TVNQILNAKGKNV-YSVLSSTT---VYEALKVMGEKNIGAILVMDGSELK---GILSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RKI+++ +SSK T V +IM EN TV + M+LM+
Sbjct: 55 YARKIVLKDKSSKETFVHEIM--ENNFFTVKLSDDLDACMELMS 96
>gi|160897815|ref|YP_001563397.1| signal-transduction protein [Delftia acidovorans SPH-1]
gi|333915885|ref|YP_004489617.1| putative signal transduction protein with CBS domains [Delftia sp.
Cs1-4]
gi|160363399|gb|ABX35012.1| putative signal-transduction protein with CBS domains [Delftia
acidovorans SPH-1]
gi|333746085|gb|AEF91262.1| putative signal transduction protein with CBS domains [Delftia sp.
Cs1-4]
Length = 146
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 65/109 (59%), Gaps = 8/109 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++DILK+K A G+ D+V DA++ M +GAL+V++ E +AGI+TER
Sbjct: 2 TAVADILKSK---ASGAVYSIAPTDSVLDALRLMADKGIGALLVMEGSE---IAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
DY RKI + GR+S +T V D+MT + ++ V P M +MT + L
Sbjct: 56 DYARKIALLGRTSGATLVRDVMTRD--VLFVGPTQTTQECMAVMTENRL 102
>gi|222111496|ref|YP_002553760.1| signal transduction protein with cbs domains [Acidovorax ebreus
TPSY]
gi|221730940|gb|ACM33760.1| putative signal transduction protein with CBS domains [Acidovorax
ebreus TPSY]
Length = 145
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 64/109 (58%), Gaps = 8/109 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+++IL+ K ADG DTV A++ M +GAL+V++ G+Q +AGI TER
Sbjct: 2 TTVAEILRTK---ADGQVHAVEPSDTVLTALRRMADKGIGALLVME-GDQ--IAGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
DY RK+++ GRSS T V ++MT + V P + M LMT + L
Sbjct: 56 DYARKMVLLGRSSGDTPVSEVMTRAVRF--VRPTQSAEQCMALMTENRL 102
>gi|381191507|ref|ZP_09899017.1| hypothetical protein RLTM_11548 [Thermus sp. RL]
gi|384430235|ref|YP_005639595.1| putative signal transduction protein [Thermus thermophilus
SG0.5JP17-16]
gi|333965703|gb|AEG32468.1| putative signal transduction protein with CBS domains [Thermus
thermophilus SG0.5JP17-16]
gi|380450867|gb|EIA38481.1| hypothetical protein RLTM_11548 [Thermus sp. RL]
Length = 143
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 9/104 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G + TV DA++ + +H++GAL+V+ E + GI TERD
Sbjct: 2 TVRQVLVHKGGGVHA----IHPEATVLDALRKLAEHDIGALLVM---EGDRLLGIFTERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK+++ GR SK TKV ++MT + TV+P+ + AM+LMT
Sbjct: 55 YARKLVLLGRFSKDTKVREVMT--MGVPTVAPEAFLEEAMRLMT 96
>gi|121595155|ref|YP_987051.1| signal-transduction protein [Acidovorax sp. JS42]
gi|120607235|gb|ABM42975.1| putative signal-transduction protein with CBS domains [Acidovorax
sp. JS42]
Length = 145
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 64/109 (58%), Gaps = 8/109 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+++IL+ K ADG DTV A++ M +GAL+V++ G+Q +AGI TER
Sbjct: 2 TTVAEILRTK---ADGQVHAVEPSDTVLTALRRMADKGIGALLVME-GDQ--IAGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
DY RK+++ GRSS T V ++MT + V P + M LMT + L
Sbjct: 56 DYARKMVLLGRSSGDTPVSEVMTRAVRF--VRPAQSAEQCMALMTENRL 102
>gi|393775714|ref|ZP_10364025.1| putative signal-transduction protein [Ralstonia sp. PBA]
gi|392717440|gb|EIZ05003.1| putative signal-transduction protein [Ralstonia sp. PBA]
Length = 146
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 64/108 (59%), Gaps = 8/108 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ IL+ K D + D V+DA++ M++ ++GA++V++ E + GI+TERD
Sbjct: 3 TVAAILQTK---PDRTVHTIRPDAPVFDAIRLMSEKSIGAVLVMEGDE---IVGIVTERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
Y RKI++ RSSKST V DIMT +I V P R M LMT L
Sbjct: 57 YARKIVLMDRSSKSTPVRDIMT--RAVIYVGPQEDNERCMALMTERRL 102
>gi|398810185|ref|ZP_10569015.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Variovorax sp. CF313]
gi|398083876|gb|EJL74580.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Variovorax sp. CF313]
Length = 142
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 67/104 (64%), Gaps = 11/104 (10%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+S++LK A W T+ DT V+DA+ ++ + VGAL+V+ GE+ + G ++ERD
Sbjct: 4 VSELLKRHDSAA-----WRTSPDTSVFDALSTLARFEVGALMVMD-GEK--LVGFLSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK+ +QG++SK KV DIMT + ++TV+P T+ M LM+
Sbjct: 56 YTRKVALQGKNSKEVKVRDIMTPD--VMTVTPQTRTRACMTLMS 97
>gi|285018954|ref|YP_003376665.1| signal-transduction protein with cbs domains [Xanthomonas
albilineans GPE PC73]
gi|283474172|emb|CBA16673.1| putative signal-transduction protein with cbs domains [Xanthomonas
albilineans GPE PC73]
Length = 142
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 63/105 (60%), Gaps = 9/105 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G D V +A++ M +GA++V++ G +AGI++ERD
Sbjct: 3 TVRHVLSEKG----GEIHAIAPDAAVIEALRLMADKGIGAVLVMQDGH---LAGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTG 159
Y RK+++Q RSS +T V DIM+ +K+ TV P V + M+LMTG
Sbjct: 56 YARKVVLQERSSATTPVRDIMS--DKVHTVDPAQSVQQCMELMTG 98
>gi|196231756|ref|ZP_03130613.1| putative signal-transduction protein with CBS domains
[Chthoniobacter flavus Ellin428]
gi|196224228|gb|EDY18741.1| putative signal-transduction protein with CBS domains
[Chthoniobacter flavus Ellin428]
Length = 146
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D TVY+A++ M + N+GAL VV G + GI+TERDY RK+I++G+SSK T V IM+
Sbjct: 24 DATVYEAIELMAEKNIGALPVVDRGR---LLGILTERDYARKVILEGKSSKDTSVSAIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
ITV+P V M++MT
Sbjct: 81 RSP--ITVTPADTVGECMRIMT 100
>gi|404400937|ref|ZP_10992521.1| hypothetical protein PfusU_14281 [Pseudomonas fuscovaginae UPB0736]
Length = 147
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 64/112 (57%), Gaps = 7/112 (6%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++++LK KG + D TV++A+ M + NVGAL VV E+ V GII+ERD
Sbjct: 3 TVAELLKLKGSQRQEVY-TVRNDHTVFEALIKMAEKNVGALPVVD--ERGLVVGIISERD 59
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
Y RK+I+ G SS TKV +IM +ITV KV M +MT L LP
Sbjct: 60 YARKVILHGLSSVKTKVCEIMN--APVITVDSHQKVETCMAIMTDRHLRHLP 109
>gi|167572679|ref|ZP_02365553.1| CBS domain protein [Burkholderia oklahomensis C6786]
Length = 154
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 68/110 (61%), Gaps = 10/110 (9%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD--DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGII 110
S T++ IL++K D T + D+VY+A+K M + ++GAL+V+ + +AGI+
Sbjct: 2 SLTVAHILRSK---PDSGRTIHTIEKSDSVYNAIKLMAEKSIGALLVMDGAD---IAGIV 55
Query: 111 TERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
TERDY RK+++ RSSK+T+V +IMT +K+ V P M LMT H
Sbjct: 56 TERDYARKVVLLDRSSKATRVEEIMT--SKVRYVEPTQTSDECMALMTEH 103
>gi|167565573|ref|ZP_02358489.1| CBS domain protein [Burkholderia oklahomensis EO147]
Length = 154
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 68/110 (61%), Gaps = 10/110 (9%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD--DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGII 110
S T++ IL++K D T + D+VY+A+K M + ++GAL+V+ + +AGI+
Sbjct: 2 SLTVAHILRSK---PDSGRTIHTIEKSDSVYNAIKLMAEKSIGALLVMDGAD---IAGIV 55
Query: 111 TERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
TERDY RK+++ RSSK+T+V +IMT +K+ V P M LMT H
Sbjct: 56 TERDYARKVVLLDRSSKATRVEEIMT--SKVRYVEPTQTSDECMALMTEH 103
>gi|89898826|ref|YP_521297.1| signal-transduction protein [Rhodoferax ferrireducens T118]
gi|89343563|gb|ABD67766.1| putative signal-transduction protein with CBS domains [Rhodoferax
ferrireducens T118]
Length = 142
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 56/80 (70%), Gaps = 5/80 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV++A+K + + VGAL V++ G+ +AGI++ERDY RK+ + G++SK T V DIMT +
Sbjct: 23 TVFEALKLLANYGVGALTVMENGK---LAGIVSERDYTRKVALMGKNSKETTVADIMTRD 79
Query: 139 NKLITVSPDTKVLRAMQLMT 158
+ITV+P+T M LM+
Sbjct: 80 --VITVTPNTGTHACMALMS 97
>gi|319763071|ref|YP_004127008.1| CBS domain-containing protein [Alicycliphilus denitrificans BC]
gi|330825150|ref|YP_004388453.1| signal transduction protein [Alicycliphilus denitrificans K601]
gi|317117632|gb|ADV00121.1| CBS domain containing protein [Alicycliphilus denitrificans BC]
gi|329310522|gb|AEB84937.1| putative signal transduction protein with CBS domains
[Alicycliphilus denitrificans K601]
Length = 145
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 65/109 (59%), Gaps = 8/109 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+++ILK+K D DTV A++ M + ++GAL+V++ GEQ +AGI TER
Sbjct: 2 TTVAEILKSK---PDAQVHCVAPSDTVLAALRLMAEKHIGALLVME-GEQ--IAGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
DY RK+++ GR+S T V ++MT + V P + M LMT + L
Sbjct: 56 DYARKVVLLGRASVDTPVREVMTRAVRF--VHPSHSAEQCMALMTENRL 102
>gi|224827002|ref|ZP_03700100.1| putative signal transduction protein with CBS domains
[Pseudogulbenkiania ferrooxidans 2002]
gi|224600835|gb|EEG07020.1| putative signal transduction protein with CBS domains
[Pseudogulbenkiania ferrooxidans 2002]
Length = 151
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 65/104 (62%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L +K + ++ + D TV+ A++ M + NVGA++V+ + V GI +ERD
Sbjct: 3 TVRQLLDSK---PNRQLIFVSPDATVFQALQVMAEQNVGAVLVMHACD---VHGIFSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y R++++QGR+S T V +IMT ++++ V+P+ V M LMT
Sbjct: 57 YARRVVLQGRTSAGTHVREIMT--SRVVYVTPEQTVDECMALMT 98
>gi|408482496|ref|ZP_11188715.1| hypothetical protein PsR81_18138 [Pseudomonas sp. R81]
Length = 146
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 6/104 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LKAK + + D TV++A+ M++ NVGAL VV+ G V GII+ERD
Sbjct: 3 TVAQVLKAKDQ-KNQEVHVIKHDHTVFEALVRMSEKNVGALPVVQDG---VVVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RKI+++G SS +TKV ++M+ + +ITV KV M +MT
Sbjct: 59 YARKIMLKGLSSVTTKVHEVMS--SPVITVDTHKKVDECMNIMT 100
>gi|347538281|ref|YP_004845705.1| hypothetical protein NH8B_0456 [Pseudogulbenkiania sp. NH8B]
gi|345641458|dbj|BAK75291.1| CBS domain protein [Pseudogulbenkiania sp. NH8B]
Length = 151
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 65/104 (62%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L +K + ++ + D TV+ A++ M + NVGA++V+ + V GI +ERD
Sbjct: 3 TVRQLLDSK---PNRQLIFVSPDATVFQALQVMAEQNVGAVLVMHACD---VHGIFSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y R++++QGR+S T V +IMT ++++ V+P+ V M LMT
Sbjct: 57 YARRVVLQGRTSAGTHVREIMT--SRVVYVTPEQTVDECMALMT 98
>gi|330802860|ref|XP_003289430.1| hypothetical protein DICPUDRAFT_92298 [Dictyostelium purpureum]
gi|325080472|gb|EGC34026.1| hypothetical protein DICPUDRAFT_92298 [Dictyostelium purpureum]
Length = 196
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 6/110 (5%)
Query: 47 EEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSV 106
E F T + +I+K+K + + ++ +DT+Y A+K M +H +GAL+V + S+
Sbjct: 93 EYFAFGDTPVGEIIKSK---HEKNIIFIKENDTIYQAIKEMDKHGIGALLVTSEKDG-SL 148
Query: 107 AGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQL 156
GI TERDYL K+ + + SK+TKV + MT + T+ T V+ AM L
Sbjct: 149 IGIFTERDYLGKVALLDKDSKTTKVSEAMTRN--VTTICEKTGVVEAMHL 196
>gi|167839482|ref|ZP_02466166.1| CBS domain protein [Burkholderia thailandensis MSMB43]
gi|424905115|ref|ZP_18328622.1| CBS domain protein [Burkholderia thailandensis MSMB43]
gi|390929509|gb|EIP86912.1| CBS domain protein [Burkholderia thailandensis MSMB43]
Length = 154
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 68/110 (61%), Gaps = 10/110 (9%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD--DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGII 110
S T++ IL++K D T + D+VY+A+K M + ++GAL+V+ + ++AGI+
Sbjct: 2 SLTVAQILRSK---PDSGRTIHTIEKSDSVYNAIKLMAERSIGALLVM---DGANIAGIV 55
Query: 111 TERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
TERDY RK+++ RSSK+T+V +IMT K+ V P M LMT H
Sbjct: 56 TERDYARKVVLLDRSSKATRVEEIMTA--KVRYVEPTQTSDECMALMTEH 103
>gi|373954157|ref|ZP_09614117.1| putative signal transduction protein with CBS domains
[Mucilaginibacter paludis DSM 18603]
gi|373890757|gb|EHQ26654.1| putative signal transduction protein with CBS domains
[Mucilaginibacter paludis DSM 18603]
Length = 142
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 65/106 (61%), Gaps = 11/106 (10%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
I +IL+ KG ++ + +T VYDA+ M + N+ +L+++ E + + GI TERD
Sbjct: 4 IRNILENKGH-----QVYAVSPETSVYDALHMMMEKNISSLLIM---ENEVLKGIFTERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
Y RK+++ GRSS+ T +G+IMT L T++P + M++M+ +
Sbjct: 56 YARKLVLMGRSSRETPIGEIMTA--NLFTITPSETIDHCMEMMSTY 99
>gi|186472103|ref|YP_001859445.1| signal-transduction protein [Burkholderia phymatum STM815]
gi|184194435|gb|ACC72399.1| putative signal-transduction protein with CBS domains [Burkholderia
phymatum STM815]
Length = 144
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 8/105 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++ +LK+K D+VY+A+K M +GAL+V + G ++AGI+TER
Sbjct: 2 TSVAQVLKSK---PTQEVYTIEATDSVYNAIKLMADKQIGALIVKENG---AIAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
DY RKI++ RSSK+T V DIM+ + V P+ M LMT
Sbjct: 56 DYARKIVLMDRSSKTTPVRDIMSSAVRF--VRPEQTTDECMALMT 98
>gi|56479475|ref|YP_161064.1| hypothetical protein ebA7121 [Aromatoleum aromaticum EbN1]
gi|56315518|emb|CAI10163.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 148
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 61/104 (58%), Gaps = 9/104 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG GA + +V+DA+ M +H++GA++V E + GI TERD
Sbjct: 5 TVRQILETKGAGAHA----VSPGVSVFDALAVMAKHDIGAVLVT---ENDHLTGIFTERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK++++G SSK VG++MT + T++P V M +MT
Sbjct: 58 YARKLVLKGLSSKEATVGELMTP--NVCTITPSHTVDEVMNIMT 99
>gi|241767956|ref|ZP_04765497.1| putative signal transduction protein with CBS domains [Acidovorax
delafieldii 2AN]
gi|241360854|gb|EER57698.1| putative signal transduction protein with CBS domains [Acidovorax
delafieldii 2AN]
Length = 146
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++DIL++K D + DD+V+DA++ M +GAL+V+ E ++ GI+TER
Sbjct: 2 TAVADILRSK---RDNTVHRIGPDDSVFDALQRMADKGIGALLVM---EGDAIVGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RKI + GR S +T V D+MT + ++ V P M LMT + L LP
Sbjct: 56 DYARKIALLGRKSSATLVRDVMTAD--VMYVQPAQTSEECMALMTENRLRHLP 106
>gi|332527070|ref|ZP_08403152.1| signal-transduction protein [Rubrivivax benzoatilyticus JA2]
gi|332111502|gb|EGJ11485.1| signal-transduction protein [Rubrivivax benzoatilyticus JA2]
Length = 136
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 72 LW-CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
LW DD+V+ A++ + H +GAL+V+ G + G+++ERDY RK+ +QGR+S+ T+
Sbjct: 9 LWHVHPDDSVFAALELLAAHEIGALLVMDGGR---LVGVVSERDYTRKVALQGRNSRETR 65
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
V +IMT + ++ V P + M LM+ H
Sbjct: 66 VAEIMTRD--VVRVPPAAPMHECMALMSEH 93
>gi|406037632|ref|ZP_11044996.1| hypothetical protein AparD1_11924 [Acinetobacter parvus DSM 16617 =
CIP 108168]
Length = 143
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A S + + TV +A+K M VGALVV E + V GI +ER
Sbjct: 2 TIVAQVIKNK---AVQSIFTISPNATVLEAIKIMADKGVGALVV---AEDEKVVGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RKI + R+S+ST V DIMT +K+I+VS + V +QLMT L LP
Sbjct: 56 DYTRKIALMERTSESTLVSDIMT--SKVISVSLNHTVEECLQLMTDRHLRHLP 106
>gi|326801888|ref|YP_004319707.1| signal transduction protein with CBS domains [Sphingobacterium sp.
21]
gi|326552652|gb|ADZ81037.1| putative signal transduction protein with CBS domains
[Sphingobacterium sp. 21]
Length = 142
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 9/104 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ K K S + + +D+V A++ M + N+ AL+VV +Q + GI TERD
Sbjct: 3 TVKYILENKAK----SIVSVSPNDSVLGALRIMMEKNISALLVV---DQGVLLGIFTERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RKII++GR+S +T + ++MT TV P+ + MQLMT
Sbjct: 56 YARKIILKGRASANTAIHEVMTSNPH--TVGPNHSIDHCMQLMT 97
>gi|377820853|ref|YP_004977224.1| signal-transduction protein [Burkholderia sp. YI23]
gi|357935688|gb|AET89247.1| signal-transduction protein [Burkholderia sp. YI23]
Length = 185
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +LKAK +D + + +VY+AV M++ VGALVV G +V GI+TERD
Sbjct: 20 TVKQVLKAK---SDAAVHTIDAEASVYEAVALMSRAEVGALVVTVGG---AVCGIVTERD 73
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK+I+Q ++S++T V +IMT +++VS T M +MT
Sbjct: 74 YARKVILQDKASRTTTVCEIMT--APIMSVSLRTSADECMAMMT 115
>gi|229589653|ref|YP_002871772.1| hypothetical protein PFLU2156 [Pseudomonas fluorescens SBW25]
gi|229361519|emb|CAY48395.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 146
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 66/104 (63%), Gaps = 6/104 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK+K + + D TV++A+ M++ NVGAL V+K G V GII+ERD
Sbjct: 3 TVAQVLKSKDQ-KNQEVHTIKHDHTVFEALVRMSEKNVGALPVIKEG---VVVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK+I++G SS +T+V ++M+ + +ITV KV M +MT
Sbjct: 59 YARKLILKGLSSVTTRVDEVMS--SPVITVDSHKKVDECMNIMT 100
>gi|293607877|ref|ZP_06690180.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|375135033|ref|YP_004995683.1| hypothetical protein BDGL_001415 [Acinetobacter calcoaceticus
PHEA-2]
gi|427425971|ref|ZP_18916043.1| CBS domain protein [Acinetobacter baumannii WC-136]
gi|292828450|gb|EFF86812.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325122478|gb|ADY82001.1| CBS domain protein [Acinetobacter calcoaceticus PHEA-2]
gi|425697303|gb|EKU66987.1| CBS domain protein [Acinetobacter baumannii WC-136]
Length = 143
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A+ + + TV +A+K M +GALVV E + V GI++ER
Sbjct: 2 TIVAQVIKNK---AEQDIFTISPEATVLEAIKIMADKGIGALVV---AEGEKVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RK+ + RSS ST V +IMT +K++TVS + V +QLMT L LP
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMT--SKVLTVSLNNTVEECLQLMTDRHLRHLP 106
>gi|187924051|ref|YP_001895693.1| hypothetical protein Bphyt_2066 [Burkholderia phytofirmans PsJN]
gi|187715245|gb|ACD16469.1| CBS domain containing protein [Burkholderia phytofirmans PsJN]
Length = 163
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 61/113 (53%), Gaps = 12/113 (10%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
+++ L++K +W T T VYDAV M VGAL+VV G VAGI+TER
Sbjct: 3 SVAQFLRSKAS----QTVWSTQASTSVYDAVAIMAHRRVGALIVVHEGR---VAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RKI + RSS++T V DIM+ + V P M LMT + + LP
Sbjct: 56 DYARKIALMHRSSRNTPVRDIMSTTVRY--VGPGQTTEECMALMTEYRIRYLP 106
>gi|398875935|ref|ZP_10631096.1| CBS domain-containing protein [Pseudomonas sp. GM67]
gi|398884298|ref|ZP_10639237.1| CBS domain-containing protein [Pseudomonas sp. GM60]
gi|398195002|gb|EJM82059.1| CBS domain-containing protein [Pseudomonas sp. GM60]
gi|398205711|gb|EJM92491.1| CBS domain-containing protein [Pseudomonas sp. GM67]
Length = 146
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V DIM+
Sbjct: 24 DQMVLEALKMMAEKNVGALPVIEAGQ---VVGVISERDYARKVVLQGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
++T + R M++MT
Sbjct: 81 --APVVTADSQQSIERCMEVMT 100
>gi|149279021|ref|ZP_01885155.1| hypothetical protein PBAL39_04049 [Pedobacter sp. BAL39]
gi|149230300|gb|EDM35685.1| hypothetical protein PBAL39_04049 [Pedobacter sp. BAL39]
Length = 142
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 63/106 (59%), Gaps = 11/106 (10%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TI +LK K S ++ T V DA+ M + N+ AL++++ G+ + GI TER
Sbjct: 3 TIKQLLKTKS-----SQIFSVPASTSVLDALHVMMEKNISALLIMESGQ---LLGIFTER 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTG 159
DY RKII+QG+SS T + ++MT + IT+SPD + M++MT
Sbjct: 55 DYARKIILQGKSSADTFLAEVMT--GQPITISPDDHIEVCMEIMTN 98
>gi|340787171|ref|YP_004752636.1| putative signal-transduction protein with CBS domains [Collimonas
fungivorans Ter331]
gi|340552438|gb|AEK61813.1| putative signal-transduction protein with CBS domains [Collimonas
fungivorans Ter331]
Length = 151
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 66/112 (58%), Gaps = 10/112 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ ILK K + + D V+DA+K M+ +VGAL+V G+ + GI+TERD
Sbjct: 8 TVAQILKTK---QNQTVYTIAPDAKVFDAIKMMSDKSVGALLVTVQGK---IVGIVTERD 61
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
Y RK+I++GRSS T V DIMT + ++ V D + M LMT + L LP
Sbjct: 62 YARKMILKGRSSTDTSVSDIMT--SSVMYVRLDDTNEQCMALMTENRLRHLP 111
>gi|359430476|ref|ZP_09221485.1| hypothetical protein ACT4_040_00360 [Acinetobacter sp. NBRC 100985]
gi|358234116|dbj|GAB03024.1| hypothetical protein ACT4_040_00360 [Acinetobacter sp. NBRC 100985]
Length = 143
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 65/113 (57%), Gaps = 10/113 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A S + + TV +A+K M + VGALVV E + V GI +ER
Sbjct: 2 TIVAQVIKNK---AVQSIFTISPNATVLEAIKIMAEKGVGALVV---AEDEKVIGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RKI + RSS +T V DIMT +K+I+V + V +QLMT L LP
Sbjct: 56 DYTRKIALMERSSNNTPVSDIMT--SKVISVGLNHTVEECLQLMTDRHLRHLP 106
>gi|156129382|gb|ABU50910.1| putative CBS domain protein [Pseudomonas sp. WBC-3]
Length = 146
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 5/81 (6%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+ V DA+K M N+GAL VV+ G+ V GI++ERDY RK++++GRSS T V DIM
Sbjct: 25 EMVLDALKLMADKNIGALAVVENGQ---VVGIVSERDYARKVVLKGRSSVGTPVRDIMN- 80
Query: 138 ENKLITVSPDTKVLRAMQLMT 158
+ +ITVS + V M +MT
Sbjct: 81 -SPVITVSANLCVEHCMTIMT 100
>gi|429331441|ref|ZP_19212197.1| CBS domain-containing protein [Pseudomonas putida CSV86]
gi|428763853|gb|EKX86012.1| CBS domain-containing protein [Pseudomonas putida CSV86]
Length = 146
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 65/108 (60%), Gaps = 6/108 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + D + TV +A+ M + NVGAL VV+ GE V GI++ERD
Sbjct: 3 TVAQLLKLKSQHTDQVY-TIAPHQTVLEALMVMAEKNVGALPVVEGGE---VVGIVSERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
Y RK++++GRSS T+V +IM+ + +ITV+ V M +MT L
Sbjct: 59 YARKMVLKGRSSVGTEVREIMS--SPVITVNSHQNVDTCMTMMTNSHL 104
>gi|262372502|ref|ZP_06065781.1| CBS domain-containing protein [Acinetobacter junii SH205]
gi|262312527|gb|EEY93612.1| CBS domain-containing protein [Acinetobacter junii SH205]
Length = 143
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A S + + TV +A+K M VGALVV E + V GI +ER
Sbjct: 2 TIVAQVIKNK---AVQSIFTISPNATVLEAIKIMADKGVGALVV---AEDEKVVGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RKI + RSS +T V DIMT +K+I+VS + V + LMT L LP
Sbjct: 56 DYTRKIALMERSSNNTLVSDIMT--SKVISVSLNNTVEECLNLMTDRHLRHLP 106
>gi|239816604|ref|YP_002945514.1| signal transduction protein with CBS domains [Variovorax paradoxus
S110]
gi|239803181|gb|ACS20248.1| putative signal transduction protein with CBS domains [Variovorax
paradoxus S110]
Length = 142
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 67/104 (64%), Gaps = 11/104 (10%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+S++LK A W T+ DT V+DA+ ++ + VGAL+V+ G++ + G ++ERD
Sbjct: 4 VSELLKRHDSAA-----WRTSPDTSVFDALATLARFEVGALMVMD-GDR--LVGFLSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK+ +QG++SK KV +IMT + ++TV+P T+ M LM+
Sbjct: 56 YTRKVALQGKNSKEMKVSEIMTPD--VMTVTPQTRTRACMALMS 97
>gi|395803543|ref|ZP_10482789.1| signal-transduction protein [Flavobacterium sp. F52]
gi|395434355|gb|EJG00303.1| signal-transduction protein [Flavobacterium sp. F52]
Length = 141
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 65/104 (62%), Gaps = 9/104 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ ILKAKG+ + ++ TVYDA+K M + N+GA++V+ + + GI++ERD
Sbjct: 2 TVDQILKAKGRNVYSIF----SNLTVYDALKVMGEKNIGAILVM---DDNVLKGILSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RKI+++ +SSK T V +IM E+ + TV + M+LM+
Sbjct: 55 YARKIVLKDKSSKETFVHEIM--ESHVFTVKLSDNLEDCMELMS 96
>gi|436836212|ref|YP_007321428.1| putative signal transduction protein with CBS domains [Fibrella
aestuarina BUZ 2]
gi|384067625|emb|CCH00835.1| putative signal transduction protein with CBS domains [Fibrella
aestuarina BUZ 2]
Length = 196
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 56/81 (69%), Gaps = 5/81 (6%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+TVY+A++ M N+GA++V+ G+ + GI +ERDY RK I+QGR+SK T + D+MT
Sbjct: 73 ETVYEALQLMAAKNIGAVLVLDGGD---LVGIFSERDYARKGILQGRASKDTLIRDVMT- 128
Query: 138 ENKLITVSPDTKVLRAMQLMT 158
+ LIT++P+ + AM M+
Sbjct: 129 -SSLITIAPEQLLESAMLTMS 148
>gi|365097177|ref|ZP_09331422.1| signal-transduction protein [Acidovorax sp. NO-1]
gi|363413471|gb|EHL20667.1| signal-transduction protein [Acidovorax sp. NO-1]
Length = 145
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 67/113 (59%), Gaps = 10/113 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ IL++K D S T +V DA++ M ++GAL+V E +++ GI TER
Sbjct: 2 TIVAKILQSK---PDASVHTITPAASVLDALRLMADKSIGALIVT---EGEAIVGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RKI + GR+S T+V D+MT + ++ V PD + MQ+M+ + L LP
Sbjct: 56 DYARKIALMGRTSAVTQVKDVMT--SAVMFVRPDQTSEQCMQIMSNNRLRHLP 106
>gi|409418943|ref|ZP_11258905.1| hypothetical protein PsHYS_07040 [Pseudomonas sp. HYS]
Length = 146
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + D V DA++ M + NVGAL VV+ G V GI++ERD
Sbjct: 3 TVAQLLKTKAQ-QHHQVHTIGPDHMVLDALRLMAEKNVGALPVVQDGR---VVGIVSERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK++++GRSS T V IM+ +ITV P V M +MT
Sbjct: 59 YARKMVLKGRSSVGTPVSAIMSA--PVITVDPHQNVEYCMNMMT 100
>gi|226941745|ref|YP_002796819.1| hypothetical protein LHK_02830 [Laribacter hongkongensis HLHK9]
gi|226716672|gb|ACO75810.1| CBS domain protein [Laribacter hongkongensis HLHK9]
Length = 151
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
S T+ +L+ K + + + D TV+ A++ + +H++GA+ V+ + + GI +E
Sbjct: 2 SATVRQLLQDKNQP---PLIAVSPDCTVFQALQKLAEHDIGAVAVM---DGPRLVGIFSE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
RDY R++I++GR S T V +MTE ++I V PDT + M +MT
Sbjct: 56 RDYARRMILEGRQSSGTPVTAVMTE--RVIVVHPDTPASQCMAIMT 99
>gi|407364886|ref|ZP_11111418.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas mandelii JR-1]
Length = 146
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D+ V +A+K M + NVGAL V+ G+ V G+I+ERDY RK+++QGRSS T V DIM+
Sbjct: 24 DEMVLEALKLMAEKNVGALPVIDKGQ---VVGVISERDYARKVVLQGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+ ++T + R M +MT
Sbjct: 81 --SPVVTAPSQQSIERCMAVMT 100
>gi|284176977|gb|ADB81392.1| putative CBS domain protein [Pseudomonas sp. 1-7]
Length = 146
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 53/81 (65%), Gaps = 5/81 (6%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+ V DA+K M N+GAL VV+ G+ V G+++ERDY RK++++GRSS T V DIM
Sbjct: 25 EMVLDALKLMADKNIGALAVVENGQ---VVGVVSERDYARKVVLKGRSSVGTPVRDIMN- 80
Query: 138 ENKLITVSPDTKVLRAMQLMT 158
+ +ITVS + V M +MT
Sbjct: 81 -SPVITVSANLCVEHCMTIMT 100
>gi|332662391|ref|YP_004445179.1| hypothetical protein [Haliscomenobacter hydrossis DSM 1100]
gi|332331205|gb|AEE48306.1| CBS domain containing protein [Haliscomenobacter hydrossis DSM
1100]
Length = 145
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 57/87 (65%), Gaps = 5/87 (5%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
L + D +VY A++++ +HN+GAL+V+ E + GI +ERDY R+ I++G+ S+ + V
Sbjct: 16 LAVSPDTSVYSALEALEKHNIGALLVM---EGDKLVGIFSERDYARRGILKGKFSRESFV 72
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMT 158
D+MT + + TVSP K+ + +MT
Sbjct: 73 KDLMT--SPVFTVSPQAKIEECLTIMT 97
>gi|452822839|gb|EME29855.1| CBS domain protein [Galdieria sulphuraria]
Length = 341
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 22/132 (16%)
Query: 37 RFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVY---------DAVKSM 87
R + S +M FE T+ D+L++KG G D+TVY +A++ M
Sbjct: 170 REDCYVSQKMIAPFFEQQTVKDVLESKGLDRSG-------DNTVYQIHQSVSVDEAIQKM 222
Query: 88 TQHNVGALVVVKPGEQK-SVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
H VG L+V + + S+ G++TER+++RK I+QG++S+ T DIM ++ L +
Sbjct: 223 DDHKVGTLLVTQSESNRHSIVGLLTERNFIRKCILQGKNSRETLASDIMIQD--LPCIHL 280
Query: 147 DTKVLRAMQLMT 158
+TKV QL+T
Sbjct: 281 NTKV---SQLLT 289
>gi|402758061|ref|ZP_10860317.1| hypothetical protein ANCT7_10176 [Acinetobacter sp. NCTC 7422]
Length = 143
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A S + + TV +A+K M VGALVV E + V GI +ER
Sbjct: 2 TIVAQVIKNK---AVQSIFTISPNATVLEAIKIMADKGVGALVV---AEDEKVVGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RKI + RSS +T V DIMT +K+I+VS + V + LMT L LP
Sbjct: 56 DYTRKIALMERSSNNTPVADIMT--SKVISVSLNHTVEECLNLMTDRHLRHLP 106
>gi|299769864|ref|YP_003731890.1| hypothetical protein AOLE_08130 [Acinetobacter oleivorans DR1]
gi|298699952|gb|ADI90517.1| CBS domain pair family protein [Acinetobacter oleivorans DR1]
Length = 143
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K ++ + + TV +A+K M +GALVV E + V GI++ER
Sbjct: 2 TIVAQVIKNK---SEQDIFTISPEATVLEAIKIMADKGIGALVV---AEGEKVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RK+ + RSS ST V +IMT +K++TVS + V +QLMT L LP
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMT--SKVLTVSLNNTVEECLQLMTDRHLRHLP 106
>gi|399000051|ref|ZP_10702782.1| CBS domain-containing protein [Pseudomonas sp. GM18]
gi|398130463|gb|EJM19800.1| CBS domain-containing protein [Pseudomonas sp. GM18]
Length = 146
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA+K M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V +IM+
Sbjct: 24 DQMVLDALKMMAEKNVGALPVIEEGQ---VVGVISERDYARKVVLQGRSSVGTPVREIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
++T + R M++MT
Sbjct: 81 --APVVTADSLQSIERCMEVMT 100
>gi|398858953|ref|ZP_10614637.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM79]
gi|398238054|gb|EJN23791.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM79]
Length = 146
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA+K M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V +IM+
Sbjct: 24 DQMVLDALKMMAEKNVGALPVIEDGQ---VVGVISERDYARKVVLQGRSSVGTPVREIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
++T + R M +MT
Sbjct: 81 --APVVTADSQQSIERCMAVMT 100
>gi|423691049|ref|ZP_17665569.1| CBS domain protein [Pseudomonas fluorescens SS101]
gi|387999980|gb|EIK61309.1| CBS domain protein [Pseudomonas fluorescens SS101]
Length = 146
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 66/106 (62%), Gaps = 10/106 (9%)
Query: 55 TISDILKAKG-KGADGSWL-WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
T++ +LKAK K D + W D TV++A+ M++ NVGAL VVK V GII+E
Sbjct: 3 TVAQLLKAKDQKNQDVHTIKW---DHTVFEALVRMSEKNVGALPVVK---DDVVVGIISE 56
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
RDY RKI+++G SS +TKV ++M+ + +ITV V M +MT
Sbjct: 57 RDYARKIMLKGLSSVTTKVHEVMS--SPVITVDTHKSVEECMNIMT 100
>gi|398840530|ref|ZP_10597765.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM102]
gi|398110489|gb|EJM00392.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM102]
Length = 146
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA+K M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V +IM+
Sbjct: 24 DQMVLDALKMMAEKNVGALPVIEDGQ---VVGVISERDYARKVVLQGRSSVGTPVREIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
++T + R M +MT
Sbjct: 81 --APVVTADSQQSIERCMAVMT 100
>gi|398945962|ref|ZP_10671970.1| CBS domain-containing protein [Pseudomonas sp. GM41(2012)]
gi|398155799|gb|EJM44231.1| CBS domain-containing protein [Pseudomonas sp. GM41(2012)]
Length = 146
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D+ V +A++ M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V DIM+
Sbjct: 24 DEMVLEALRIMAEKNVGALPVIEAGQ---VVGVISERDYARKVVLQGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
++T + R M +MT
Sbjct: 81 --APVVTADSQQSIERCMAVMT 100
>gi|380513462|ref|ZP_09856869.1| signal-transduction protein with cbs domains [Xanthomonas sacchari
NCPPB 4393]
Length = 142
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 63/106 (59%), Gaps = 9/106 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG D V +A++ M +GA++V++ G+ ++GI++ERD
Sbjct: 3 TVRQVLNEKGN----EIHAVGPDTAVIEALRLMAAKGIGAVLVMQDGQ---LSGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
Y RK+++Q RSS +T V DIM+ +K+ TV P V + M+LMTG
Sbjct: 56 YARKVVLQDRSSATTPVRDIMS--SKVHTVDPAQSVQQCMELMTGQ 99
>gi|326317834|ref|YP_004235506.1| CBS domain-containing protein [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323374670|gb|ADX46939.1| CBS domain containing protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 149
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 6/89 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++DIL++K A D++ DA++ M +GAL+V+ + KS+AGI+TER
Sbjct: 2 TAVADILRSK---AHQEVFTIAPSDSMLDALRLMADKGIGALLVM---DGKSIAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLI 142
DY RK+ + GR+S T+V D+MT + +
Sbjct: 56 DYARKVALLGRTSGDTRVADVMTRAVRFV 84
>gi|374372824|ref|ZP_09630485.1| putative signal transduction protein with CBS domains [Niabella
soli DSM 19437]
gi|373234900|gb|EHP54692.1| putative signal transduction protein with CBS domains [Niabella
soli DSM 19437]
Length = 144
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 64/103 (62%), Gaps = 9/103 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S+IL KG A + TVY A++ M + N+G+LVV K GE + GI+TERDY
Sbjct: 4 VSNILGRKGHDA----ISIPPATTVYRALELMAEKNIGSLVV-KEGE--NFLGIMTERDY 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
RK+I++G+ S T V +IM+ + L V+P+ V R M+LM+
Sbjct: 57 SRKVILKGKHSSDTTVEEIMSTD--LPKVTPEDSVERCMELMS 97
>gi|330799665|ref|XP_003287863.1| hypothetical protein DICPUDRAFT_91991 [Dictyostelium purpureum]
gi|325082133|gb|EGC35626.1| hypothetical protein DICPUDRAFT_91991 [Dictyostelium purpureum]
Length = 241
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ I++ K K G + D TVYDA+K M + VGA +VV + + GI +ERDY
Sbjct: 97 VGKIIENKIKNNLGRIVRVDEDSTVYDAIKVMNEKRVGATIVVDKNNR--MTGIFSERDY 154
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
L K+ ++G + + T V DIM+ K+ITVS D+ + + +MT
Sbjct: 155 LSKVDLRGLTPRETLVKDIMSS--KVITVSGDSGASKCLSIMT 195
>gi|304309718|ref|YP_003809316.1| hypothetical protein HDN1F_00660 [gamma proteobacterium HdN1]
gi|301795451|emb|CBL43649.1| CBS domain protein [gamma proteobacterium HdN1]
Length = 146
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
+ DIL++K ++++ D+ V DA+K M++ VGAL+V E V G+I+ER
Sbjct: 3 NVRDILRSKP----SAYVYSVRPDSKVLDAIKLMSEKGVGALLVT---ENDKVVGVISER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
DY RK+++ RSS +V +IMT + +I+V P + M+LMT
Sbjct: 56 DYARKVVLMARSSHQAEVREIMTAD--VISVDPTQSMESCMELMT 98
>gi|389721991|ref|ZP_10188690.1| hypothetical protein UU5_02092 [Rhodanobacter sp. 115]
gi|388444905|gb|EIM00998.1| hypothetical protein UU5_02092 [Rhodanobacter sp. 115]
Length = 142
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
V DA+K M + VGAL+V++ GE+ + GI++ERDY RK+I+QG SS T V +IM+ +
Sbjct: 24 VLDAIKHMAEQRVGALLVMR-GER--LLGIVSERDYARKVILQGHSSAHTAVSEIMS--S 78
Query: 140 KLITVSPDTKVLRAMQLMT 158
+TV P T V M+L T
Sbjct: 79 PPLTVGPATDVFDCMRLCT 97
>gi|399522669|ref|ZP_10763332.1| CBS domain protein [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399109533|emb|CCH39893.1| CBS domain protein [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 146
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 55 TISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T++++L+ K ++L+ DD++ D ++ M + VGALVV+ G + GI++ER
Sbjct: 3 TVAELLRTKSN----TFLYSVDADDSLLDGLRIMAEKGVGALVVLSGGR---MVGIVSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
DY+RK + RS KV IMT E +I+VSP + MQLMT L
Sbjct: 56 DYVRKAALADRSMLDAKVNTIMTRE--VISVSPRDNLQYCMQLMTERRL 102
>gi|169795727|ref|YP_001713520.1| hypothetical protein ABAYE1626 [Acinetobacter baumannii AYE]
gi|184158370|ref|YP_001846709.1| CBS domain-containing protein [Acinetobacter baumannii ACICU]
gi|213157580|ref|YP_002319625.1| hypothetical protein AB57_2273 [Acinetobacter baumannii AB0057]
gi|215483212|ref|YP_002325419.1| hypothetical protein [Acinetobacter baumannii AB307-0294]
gi|260554789|ref|ZP_05827010.1| CBS domain-containing protein [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|301347585|ref|ZP_07228326.1| CBS domain pair family protein [Acinetobacter baumannii AB056]
gi|301513137|ref|ZP_07238374.1| CBS domain pair family protein [Acinetobacter baumannii AB058]
gi|301596680|ref|ZP_07241688.1| CBS domain pair family protein [Acinetobacter baumannii AB059]
gi|332850270|ref|ZP_08432618.1| CBS domain protein [Acinetobacter baumannii 6013150]
gi|332871229|ref|ZP_08439798.1| CBS domain protein [Acinetobacter baumannii 6013113]
gi|332873862|ref|ZP_08441802.1| CBS domain protein [Acinetobacter baumannii 6014059]
gi|384132476|ref|YP_005515088.1| hypothetical protein [Acinetobacter baumannii 1656-2]
gi|384143477|ref|YP_005526187.1| hypothetical protein [Acinetobacter baumannii MDR-ZJ06]
gi|385237804|ref|YP_005799143.1| hypothetical protein ABTW07_2260 [Acinetobacter baumannii
TCDC-AB0715]
gi|387123678|ref|YP_006289560.1| putative signal transduction protein [Acinetobacter baumannii
MDR-TJ]
gi|403675738|ref|ZP_10937877.1| hypothetical protein ANCT1_14062 [Acinetobacter sp. NCTC 10304]
gi|407933074|ref|YP_006848717.1| hypothetical protein M3Q_2396 [Acinetobacter baumannii TYTH-1]
gi|416151450|ref|ZP_11603652.1| CBS domain-containing protein [Acinetobacter baumannii AB210]
gi|417550058|ref|ZP_12201138.1| CBS domain protein [Acinetobacter baumannii Naval-18]
gi|417553271|ref|ZP_12204341.1| CBS domain protein [Acinetobacter baumannii Naval-81]
gi|417560669|ref|ZP_12211548.1| CBS domain protein [Acinetobacter baumannii OIFC137]
gi|417567022|ref|ZP_12217894.1| CBS domain protein [Acinetobacter baumannii OIFC143]
gi|417568545|ref|ZP_12219408.1| CBS domain protein [Acinetobacter baumannii OIFC189]
gi|417574386|ref|ZP_12225240.1| CBS domain protein [Acinetobacter baumannii Canada BC-5]
gi|417578300|ref|ZP_12229137.1| CBS domain protein [Acinetobacter baumannii Naval-17]
gi|417871712|ref|ZP_12516640.1| hypothetical protein ABNIH1_16486 [Acinetobacter baumannii ABNIH1]
gi|417873690|ref|ZP_12518556.1| hypothetical protein ABNIH2_06672 [Acinetobacter baumannii ABNIH2]
gi|417878029|ref|ZP_12522666.1| hypothetical protein ABNIH3_08338 [Acinetobacter baumannii ABNIH3]
gi|417883458|ref|ZP_12527701.1| hypothetical protein ABNIH4_13531 [Acinetobacter baumannii ABNIH4]
gi|421200616|ref|ZP_15657776.1| CBS domain protein [Acinetobacter baumannii OIFC109]
gi|421204154|ref|ZP_15661283.1| cbs domain-containing protein [Acinetobacter baumannii AC12]
gi|421457509|ref|ZP_15906846.1| CBS domain protein [Acinetobacter baumannii IS-123]
gi|421534437|ref|ZP_15980710.1| CBS domain pair family protein [Acinetobacter baumannii AC30]
gi|421621648|ref|ZP_16062563.1| CBS domain protein [Acinetobacter baumannii OIFC074]
gi|421626779|ref|ZP_16067606.1| CBS domain protein [Acinetobacter baumannii OIFC098]
gi|421629982|ref|ZP_16070697.1| CBS domain protein [Acinetobacter baumannii OIFC180]
gi|421633694|ref|ZP_16074323.1| CBS domain protein [Acinetobacter baumannii Naval-13]
gi|421643738|ref|ZP_16084230.1| CBS domain protein [Acinetobacter baumannii IS-235]
gi|421645868|ref|ZP_16086323.1| CBS domain protein [Acinetobacter baumannii IS-251]
gi|421650501|ref|ZP_16090877.1| CBS domain protein [Acinetobacter baumannii OIFC0162]
gi|421654013|ref|ZP_16094344.1| CBS domain protein [Acinetobacter baumannii Naval-72]
gi|421658597|ref|ZP_16098830.1| CBS domain protein [Acinetobacter baumannii Naval-83]
gi|421664494|ref|ZP_16104634.1| CBS domain protein [Acinetobacter baumannii OIFC110]
gi|421675515|ref|ZP_16115436.1| CBS domain protein [Acinetobacter baumannii OIFC065]
gi|421687808|ref|ZP_16127517.1| CBS domain protein [Acinetobacter baumannii IS-143]
gi|421691456|ref|ZP_16131115.1| CBS domain protein [Acinetobacter baumannii IS-116]
gi|421695902|ref|ZP_16135498.1| CBS domain protein [Acinetobacter baumannii WC-692]
gi|421698648|ref|ZP_16138189.1| CBS domain protein [Acinetobacter baumannii IS-58]
gi|421703849|ref|ZP_16143305.1| hypothetical protein B825_11216 [Acinetobacter baumannii ZWS1122]
gi|421707632|ref|ZP_16147023.1| hypothetical protein B837_11077 [Acinetobacter baumannii ZWS1219]
gi|421789595|ref|ZP_16225847.1| CBS domain protein [Acinetobacter baumannii Naval-82]
gi|421794587|ref|ZP_16230685.1| CBS domain protein [Acinetobacter baumannii Naval-2]
gi|421795557|ref|ZP_16231639.1| CBS domain protein [Acinetobacter baumannii Naval-21]
gi|421801156|ref|ZP_16237118.1| CBS domain protein [Acinetobacter baumannii Canada BC1]
gi|421804535|ref|ZP_16240445.1| CBS domain protein [Acinetobacter baumannii WC-A-694]
gi|424052104|ref|ZP_17789636.1| hypothetical protein W9G_00793 [Acinetobacter baumannii Ab11111]
gi|424059666|ref|ZP_17797157.1| hypothetical protein W9K_00780 [Acinetobacter baumannii Ab33333]
gi|424063606|ref|ZP_17801091.1| hypothetical protein W9M_00889 [Acinetobacter baumannii Ab44444]
gi|425748682|ref|ZP_18866666.1| CBS domain protein [Acinetobacter baumannii WC-348]
gi|425751818|ref|ZP_18869759.1| CBS domain protein [Acinetobacter baumannii Naval-113]
gi|445405145|ref|ZP_21431122.1| CBS domain protein [Acinetobacter baumannii Naval-57]
gi|445442922|ref|ZP_21442492.1| CBS domain protein [Acinetobacter baumannii WC-A-92]
gi|445461247|ref|ZP_21448660.1| CBS domain protein [Acinetobacter baumannii OIFC047]
gi|445471252|ref|ZP_21452005.1| CBS domain protein [Acinetobacter baumannii OIFC338]
gi|445475956|ref|ZP_21453589.1| CBS domain protein [Acinetobacter baumannii Naval-78]
gi|445492523|ref|ZP_21460470.1| CBS domain protein [Acinetobacter baumannii AA-014]
gi|169148654|emb|CAM86520.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
gi|183209964|gb|ACC57362.1| CBS domain protein [Acinetobacter baumannii ACICU]
gi|193077532|gb|ABO12362.2| hypothetical protein A1S_1935 [Acinetobacter baumannii ATCC 17978]
gi|213056740|gb|ACJ41642.1| CBS domain containing protein [Acinetobacter baumannii AB0057]
gi|213985702|gb|ACJ56001.1| CBS domain pair family protein [Acinetobacter baumannii AB307-0294]
gi|260411331|gb|EEX04628.1| CBS domain-containing protein [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|322508696|gb|ADX04150.1| CBS domain-containing protein [Acinetobacter baumannii 1656-2]
gi|323518303|gb|ADX92684.1| CBS domain-containing protein [Acinetobacter baumannii TCDC-AB0715]
gi|332730845|gb|EGJ62154.1| CBS domain protein [Acinetobacter baumannii 6013150]
gi|332731638|gb|EGJ62922.1| CBS domain protein [Acinetobacter baumannii 6013113]
gi|332737848|gb|EGJ68735.1| CBS domain protein [Acinetobacter baumannii 6014059]
gi|333363691|gb|EGK45705.1| CBS domain-containing protein [Acinetobacter baumannii AB210]
gi|342224689|gb|EGT89712.1| hypothetical protein ABNIH1_16486 [Acinetobacter baumannii ABNIH1]
gi|342230688|gb|EGT95516.1| hypothetical protein ABNIH2_06672 [Acinetobacter baumannii ABNIH2]
gi|342233896|gb|EGT98596.1| hypothetical protein ABNIH3_08338 [Acinetobacter baumannii ABNIH3]
gi|342235794|gb|EGU00359.1| hypothetical protein ABNIH4_13531 [Acinetobacter baumannii ABNIH4]
gi|347593970|gb|AEP06691.1| conserve hypothetical protein [Acinetobacter baumannii MDR-ZJ06]
gi|385878170|gb|AFI95265.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Acinetobacter baumannii MDR-TJ]
gi|395523251|gb|EJG11340.1| CBS domain protein [Acinetobacter baumannii OIFC137]
gi|395552694|gb|EJG18702.1| CBS domain protein [Acinetobacter baumannii OIFC143]
gi|395554840|gb|EJG20842.1| CBS domain protein [Acinetobacter baumannii OIFC189]
gi|395564217|gb|EJG25869.1| CBS domain protein [Acinetobacter baumannii OIFC109]
gi|395568997|gb|EJG29667.1| CBS domain protein [Acinetobacter baumannii Naval-17]
gi|398326314|gb|EJN42463.1| cbs domain-containing protein [Acinetobacter baumannii AC12]
gi|400207233|gb|EJO38204.1| CBS domain protein [Acinetobacter baumannii IS-123]
gi|400209954|gb|EJO40924.1| CBS domain protein [Acinetobacter baumannii Canada BC-5]
gi|400388026|gb|EJP51099.1| CBS domain protein [Acinetobacter baumannii Naval-18]
gi|400393530|gb|EJP60576.1| CBS domain protein [Acinetobacter baumannii Naval-81]
gi|404562065|gb|EKA67289.1| CBS domain protein [Acinetobacter baumannii IS-116]
gi|404563513|gb|EKA68721.1| CBS domain protein [Acinetobacter baumannii IS-143]
gi|404563885|gb|EKA69079.1| CBS domain protein [Acinetobacter baumannii WC-692]
gi|404572438|gb|EKA77481.1| CBS domain protein [Acinetobacter baumannii IS-58]
gi|404664420|gb|EKB32407.1| hypothetical protein W9G_00793 [Acinetobacter baumannii Ab11111]
gi|404670404|gb|EKB38296.1| hypothetical protein W9K_00780 [Acinetobacter baumannii Ab33333]
gi|404674198|gb|EKB41958.1| hypothetical protein W9M_00889 [Acinetobacter baumannii Ab44444]
gi|407191399|gb|EKE62600.1| hypothetical protein B825_11216 [Acinetobacter baumannii ZWS1122]
gi|407191738|gb|EKE62928.1| hypothetical protein B837_11077 [Acinetobacter baumannii ZWS1219]
gi|407901655|gb|AFU38486.1| CBS domain-containing protein [Acinetobacter baumannii TYTH-1]
gi|408507399|gb|EKK09094.1| CBS domain protein [Acinetobacter baumannii IS-235]
gi|408510136|gb|EKK11799.1| CBS domain protein [Acinetobacter baumannii OIFC0162]
gi|408511863|gb|EKK13510.1| CBS domain protein [Acinetobacter baumannii Naval-72]
gi|408517861|gb|EKK19396.1| CBS domain protein [Acinetobacter baumannii IS-251]
gi|408694766|gb|EKL40328.1| CBS domain protein [Acinetobacter baumannii OIFC098]
gi|408697245|gb|EKL42760.1| CBS domain protein [Acinetobacter baumannii OIFC074]
gi|408699331|gb|EKL44811.1| CBS domain protein [Acinetobacter baumannii OIFC180]
gi|408706224|gb|EKL51548.1| CBS domain protein [Acinetobacter baumannii Naval-13]
gi|408710031|gb|EKL55270.1| CBS domain protein [Acinetobacter baumannii Naval-83]
gi|408712791|gb|EKL57974.1| CBS domain protein [Acinetobacter baumannii OIFC110]
gi|409987642|gb|EKO43822.1| CBS domain pair family protein [Acinetobacter baumannii AC30]
gi|410382446|gb|EKP35000.1| CBS domain protein [Acinetobacter baumannii OIFC065]
gi|410394205|gb|EKP46543.1| CBS domain protein [Acinetobacter baumannii Naval-2]
gi|410398044|gb|EKP50271.1| CBS domain protein [Acinetobacter baumannii Naval-82]
gi|410401507|gb|EKP53647.1| CBS domain protein [Acinetobacter baumannii Naval-21]
gi|410405810|gb|EKP57844.1| CBS domain protein [Acinetobacter baumannii Canada BC1]
gi|410411906|gb|EKP63775.1| CBS domain protein [Acinetobacter baumannii WC-A-694]
gi|425490727|gb|EKU57022.1| CBS domain protein [Acinetobacter baumannii WC-348]
gi|425499574|gb|EKU65606.1| CBS domain protein [Acinetobacter baumannii Naval-113]
gi|444763044|gb|ELW87388.1| CBS domain protein [Acinetobacter baumannii WC-A-92]
gi|444763762|gb|ELW88098.1| CBS domain protein [Acinetobacter baumannii AA-014]
gi|444771741|gb|ELW95866.1| CBS domain protein [Acinetobacter baumannii OIFC047]
gi|444771992|gb|ELW96116.1| CBS domain protein [Acinetobacter baumannii OIFC338]
gi|444778500|gb|ELX02512.1| CBS domain protein [Acinetobacter baumannii Naval-78]
gi|444781895|gb|ELX05806.1| CBS domain protein [Acinetobacter baumannii Naval-57]
gi|452952329|gb|EME57763.1| hypothetical protein G347_08216 [Acinetobacter baumannii MSP4-16]
Length = 143
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K + A + + TV +A+ M + +GALVV + GEQ V GI++ER
Sbjct: 2 TIVAQVIKNKSEQA---IFTISPEATVLEAITIMAEKGIGALVVAE-GEQ--VVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RK+ + RSS ST V +IMT K+ITV + V +QLMT L LP
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMT--AKVITVGLNNTVEECLQLMTDRHLRHLP 106
>gi|319794826|ref|YP_004156466.1| signal transduction protein with cbs domains [Variovorax paradoxus
EPS]
gi|315597289|gb|ADU38355.1| putative signal transduction protein with CBS domains [Variovorax
paradoxus EPS]
Length = 142
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 66/104 (63%), Gaps = 11/104 (10%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+S++LK A W T+ T V+DA+ ++ + VGAL+V+ GE+ + G ++ERD
Sbjct: 4 VSELLKRHDSAA-----WRTSPHTSVFDALATLARFEVGALMVMD-GEK--LVGFLSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK+ +QG++SK KV +IMT + ++TV+P T+ M LM+
Sbjct: 56 YTRKVALQGKNSKEMKVSEIMTPD--VMTVTPQTRTRACMALMS 97
>gi|398905812|ref|ZP_10653134.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM50]
gi|398174118|gb|EJM61925.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM50]
Length = 146
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA+K M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V +IM+
Sbjct: 24 DRMVLDALKMMAEKNVGALPVIEDGQ---VVGVISERDYARKVVLQGRSSVGTPVREIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
++T + R M +MT
Sbjct: 81 --APVVTADSQQSIERCMAVMT 100
>gi|398949768|ref|ZP_10673432.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM33]
gi|426409536|ref|YP_007029635.1| CBS domain-containing protein [Pseudomonas sp. UW4]
gi|398158878|gb|EJM47209.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM33]
gi|426267753|gb|AFY19830.1| CBS domain-containing protein [Pseudomonas sp. UW4]
Length = 146
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D VY+A+K M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V IM+
Sbjct: 24 DQMVYEALKMMAEKNVGALPVIEDGQ---VVGVISERDYARKVVLQGRSSVGTPVRVIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
++T + R M +MT
Sbjct: 81 --APVVTADSQQSIERCMMVMT 100
>gi|351729267|ref|ZP_08946958.1| signal-transduction protein [Acidovorax radicis N35]
Length = 145
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 8/109 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ IL++K D +V++A+K M +GAL+ V E +S+AGI TER
Sbjct: 2 TIVAKILQSK---PDAIVHTIAPGASVFEALKLMADKGIGALLAV---EGESIAGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
DY RKI + GR+S T+V D+MT ++ V PD + MQ+M+ + L
Sbjct: 56 DYARKIALMGRTSAVTQVRDVMT--TSVLFVRPDQTSEQCMQIMSNNRL 102
>gi|387893315|ref|YP_006323612.1| hypothetical protein PflA506_2125 [Pseudomonas fluorescens A506]
gi|387159645|gb|AFJ54844.1| CBS domain protein [Pseudomonas fluorescens A506]
Length = 146
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 66/106 (62%), Gaps = 10/106 (9%)
Query: 55 TISDILKAKG-KGADGSWL-WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
T++ +LKAK K D + W D TV++A+ M++ NVGAL VVK V GII+E
Sbjct: 3 TVAQLLKAKDQKNQDVHTIKW---DHTVFEALVRMSEKNVGALPVVK---DDVVVGIISE 56
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
RDY RKI+++G SS +TKV ++M+ + +ITV V M +MT
Sbjct: 57 RDYARKIMLKGLSSVTTKVHEVMS--SPVITVDTHKSVEACMNIMT 100
>gi|312960091|ref|ZP_07774603.1| CBS domain protein [Pseudomonas fluorescens WH6]
gi|311285585|gb|EFQ64154.1| CBS domain protein [Pseudomonas fluorescens WH6]
Length = 146
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 66/106 (62%), Gaps = 10/106 (9%)
Query: 55 TISDILKAKG-KGADGSWL-WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
T++ +LKAK K D + W D TV++A+ M++ NVGAL VVK V GII+E
Sbjct: 3 TVAQLLKAKDHKNQDVHTIKW---DHTVFEALVRMSEKNVGALPVVKGD---VVVGIISE 56
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
RDY RKI+++G SS +TKV ++M+ + +ITV V M +MT
Sbjct: 57 RDYARKIMLKGLSSVTTKVHEVMS--SPVITVDTHKSVEECMNIMT 100
>gi|398872534|ref|ZP_10627822.1| CBS domain-containing protein [Pseudomonas sp. GM74]
gi|398202271|gb|EJM89118.1| CBS domain-containing protein [Pseudomonas sp. GM74]
Length = 146
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D TV DA++ M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V IM+
Sbjct: 24 DQTVLDALRMMAEKNVGALPVMEEGQ---VVGVISERDYARKVVLQGRSSVGTPVRAIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
++T + R M +MT
Sbjct: 81 --APVVTADSQQSIERCMAVMT 100
>gi|417547111|ref|ZP_12198197.1| CBS domain protein [Acinetobacter baumannii OIFC032]
gi|421667212|ref|ZP_16107287.1| CBS domain protein [Acinetobacter baumannii OIFC087]
gi|421671820|ref|ZP_16111788.1| CBS domain protein [Acinetobacter baumannii OIFC099]
gi|400384999|gb|EJP43677.1| CBS domain protein [Acinetobacter baumannii OIFC032]
gi|410381086|gb|EKP33659.1| CBS domain protein [Acinetobacter baumannii OIFC099]
gi|410385558|gb|EKP38049.1| CBS domain protein [Acinetobacter baumannii OIFC087]
Length = 143
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K + A + + TV +A+ M + +GALVV + GEQ V GI++ER
Sbjct: 2 TIVAQVIKNKSEQA---IFTISPEATVLEAITIMAEKGIGALVVAE-GEQ--VIGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RK+ + RSS ST V +IMT K+ITV + V +QLMT L LP
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMT--AKVITVGLNNTVEECLQLMTDRHLRHLP 106
>gi|281211188|gb|EFA85354.1| hypothetical protein PPL_02357 [Polysphondylium pallidum PN500]
Length = 239
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 9/116 (7%)
Query: 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGII 110
F T I +IL+ K K L +D + +A++ MTQ+ VGA++V+ Q + GI
Sbjct: 80 FGDTKIKEILEKKEKR---ELLTINSDQLIIEALRKMTQNKVGAIMVLDSNGQ--LEGIF 134
Query: 111 TERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
TERDY+ K+ +QG SS+ + V ++MT K T+S D+ V+ M +MT LP
Sbjct: 135 TERDYVGKVALQGLSSRQSLVKEVMTRGVK--TISADSCVVDTMHIMTNQRFRHLP 188
>gi|407940177|ref|YP_006855818.1| signal-transduction protein [Acidovorax sp. KKS102]
gi|407897971|gb|AFU47180.1| signal-transduction protein [Acidovorax sp. KKS102]
Length = 145
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 8/109 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ IL++K D + + +V DA++ M +GAL+V E S+ GI TER
Sbjct: 2 TAVAKILQSK---PDATVHTISPAASVLDALQLMADKGIGALIVT---EGASIVGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
DY RKI + GR+S T+V D+MT + ++ V PD + MQLM+ + L
Sbjct: 56 DYARKIALMGRTSAVTQVKDVMT--SAVMFVRPDQTSEQCMQLMSNNRL 102
>gi|408822883|ref|ZP_11207773.1| putative signal transduction protein [Pseudomonas geniculata N1]
Length = 143
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 57/84 (67%), Gaps = 5/84 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T+V +IMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTEVAEIMT 77
Query: 137 EENKLITVSPDTKVLRAMQLMTGH 160
K++TVSP +V +QL+T +
Sbjct: 78 --AKVVTVSPGEQVEHCLQLVTDY 99
>gi|188590819|ref|YP_001795419.1| hypothetical protein RALTA_A0024 [Cupriavidus taiwanensis LMG
19424]
gi|170937713|emb|CAP62697.1| conserved hypothetical protein, CBS domain [Cupriavidus taiwanensis
LMG 19424]
Length = 146
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 5/84 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + +GAL+V++ GE + GI++ERDY RK+I+ R+S+ T V DIMT
Sbjct: 24 TVYAALQLMAEKGIGALLVIEHGE---IKGILSERDYARKVILMQRTSRETLVRDIMT-- 78
Query: 139 NKLITVSPDTKVLRAMQLMTGHML 162
+I VS + M LMT H L
Sbjct: 79 TAVIYVSANQTTDECMALMTRHRL 102
>gi|113866093|ref|YP_724582.1| inosine-5'-monophosphate dehydrogenase [Ralstonia eutropha H16]
gi|113524869|emb|CAJ91214.1| Inosine-5'-monophosphate dehydrogenase [Ralstonia eutropha H16]
Length = 146
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + +GAL+V++ GE + GI++ERDY RK+I+ R+S+ T V DIMT
Sbjct: 24 TVYTALQLMAEKGIGALLVIEHGE---ILGILSERDYARKVILMQRTSRETLVRDIMT-- 78
Query: 139 NKLITVSPDTKVLRAMQLMTGHML 162
N +I V M LMT H L
Sbjct: 79 NAVIYVGASQTTDECMALMTRHRL 102
>gi|313679251|ref|YP_004056990.1| signal transduction protein with cbs domains [Oceanithermus
profundus DSM 14977]
gi|313151966|gb|ADR35817.1| putative signal transduction protein with CBS domains
[Oceanithermus profundus DSM 14977]
Length = 146
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D TV++A++ M ++NVGAL VV Q + G+ +ERDY RK+I++G++SK V +IM+
Sbjct: 21 DVTVFEALEKMAEYNVGALPVVDASGQ--IVGLFSERDYARKVILRGKASKDIPVSEIMS 78
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
++ ++P+T + M LMT
Sbjct: 79 --THVLYITPETTDWQCMALMT 98
>gi|262279324|ref|ZP_06057109.1| CBS domain-containing protein [Acinetobacter calcoaceticus RUH2202]
gi|424745055|ref|ZP_18173328.1| CBS domain protein [Acinetobacter baumannii WC-141]
gi|262259675|gb|EEY78408.1| CBS domain-containing protein [Acinetobacter calcoaceticus RUH2202]
gi|422942373|gb|EKU37427.1| CBS domain protein [Acinetobacter baumannii WC-141]
Length = 143
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 67/113 (59%), Gaps = 10/113 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K ++ + + TV +A+K M +GALVV GE+ V GI++ER
Sbjct: 2 TIVAQVIKNK---SEQDIFTISPEATVLEAIKIMADKGIGALVVA-DGEK--VVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RK+ + RSS ST V +IMT +K++TVS + V +QLMT L LP
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMT--SKVLTVSLNNTVEECLQLMTDRHLRHLP 106
>gi|260550350|ref|ZP_05824562.1| CBS domain-containing protein [Acinetobacter sp. RUH2624]
gi|425740420|ref|ZP_18858592.1| CBS domain protein [Acinetobacter baumannii WC-487]
gi|445433303|ref|ZP_21439661.1| CBS domain protein [Acinetobacter baumannii OIFC021]
gi|260406662|gb|EEX00143.1| CBS domain-containing protein [Acinetobacter sp. RUH2624]
gi|425494813|gb|EKU61007.1| CBS domain protein [Acinetobacter baumannii WC-487]
gi|444757695|gb|ELW82212.1| CBS domain protein [Acinetobacter baumannii OIFC021]
Length = 143
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K + A + + TV +A+ M + +GALVV E + V GI++ER
Sbjct: 2 TIVAQVIKNKSEQA---IFTISPEATVLEAITIMAEKGIGALVV---AEGEKVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RK+ + RSS ST V +IMT K+ITV + V +QLMT L LP
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMT--AKVITVGLNNTVEECLQLMTDRHLRHLP 106
>gi|430807269|ref|ZP_19434384.1| hypothetical protein D769_13336 [Cupriavidus sp. HMR-1]
gi|429500427|gb|EKZ98798.1| hypothetical protein D769_13336 [Cupriavidus sp. HMR-1]
Length = 146
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 7/88 (7%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + +GAL+V+ EQ+ + GII+ERDY RK+I+ R+S+ T V +IMT
Sbjct: 24 TVYAALQLMAEKGIGALLVM---EQQKIVGIISERDYARKVILMQRTSRETLVREIMT-- 78
Query: 139 NKLITVSPDTKVLRAMQLMTGHML--LP 164
+ +I V D M LMT H L LP
Sbjct: 79 SAVIYVRADQTTDECMALMTRHRLRHLP 106
>gi|424071979|ref|ZP_17809400.1| CBS domain-containing protein [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
gi|407998122|gb|EKG38545.1| CBS domain-containing protein [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
Length = 146
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + N+GAL VV E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLEALKLMAEKNIGALPVV---EGNRVVGVISERDYARKVVLKGRSSVGTPVKDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+K+ITV V M +MT
Sbjct: 81 --SKVITVDSQRSVEACMGIMT 100
>gi|419954602|ref|ZP_14470738.1| hypothetical protein YO5_04984 [Pseudomonas stutzeri TS44]
gi|387968466|gb|EIK52755.1| hypothetical protein YO5_04984 [Pseudomonas stutzeri TS44]
Length = 145
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+D+V++A+K M Q NVGAL V + + GI++ERDY RK+++ GRSS T+V IMT
Sbjct: 22 EDSVFEALKVMEQKNVGALPVADASGR--LVGIVSERDYARKMVLLGRSSFVTQVSAIMT 79
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
++TV P + M++MT
Sbjct: 80 --RSVVTVEPRQSIRECMEIMT 99
>gi|421808270|ref|ZP_16244121.1| CBS domain protein [Acinetobacter baumannii OIFC035]
gi|410415850|gb|EKP67631.1| CBS domain protein [Acinetobacter baumannii OIFC035]
Length = 143
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K + A + + TV +A+ M + +GALVV E + V GI++ER
Sbjct: 2 TIVAQVIKNKSEQA---IFTISPEATVLEAITIMAEKGIGALVV---AEGEKVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RK+ + RSS ST V +IMT K+ITV + V +QLMT L LP
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMT--AKVITVGLNNTVEECLQLMTDRHLRHLP 106
>gi|146299410|ref|YP_001194001.1| signal-transduction protein [Flavobacterium johnsoniae UW101]
gi|146153828|gb|ABQ04682.1| putative signal-transduction protein with CBS domains
[Flavobacterium johnsoniae UW101]
Length = 141
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 61/104 (58%), Gaps = 9/104 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL AKGK + TVY+A+K M N+GA++++ + K GI++ERD
Sbjct: 2 TVDQILNAKGKNV----FSVRSTTTVYEALKVMGDKNIGAILIIDGTDLK---GILSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RKI+++ +SSK T V +IM E+ + TV + M+LM+
Sbjct: 55 YARKIVLKDKSSKETFVHEIM--ESNVFTVQLSNNIDDCMELMS 96
>gi|424067347|ref|ZP_17804803.1| CBS [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|408000955|gb|EKG41290.1| CBS [Pseudomonas syringae pv. avellanae str. ISPaVe013]
Length = 146
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + N+GAL VV E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLEALKLMAEKNIGALPVV---EGNRVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+K+ITV V M +MT
Sbjct: 81 --SKVITVDSQRSVEACMGIMT 100
>gi|94308961|ref|YP_582171.1| hypothetical protein Rmet_0016 [Cupriavidus metallidurans CH34]
gi|93352813|gb|ABF06902.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
Length = 146
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + +GAL+V+ EQ+ + GII+ERDY RK+I+ R+S+ T V +IMT
Sbjct: 24 TVYAALQLMAEKGIGALLVM---EQQKIVGIISERDYARKVILMQRTSRETLVREIMT-- 78
Query: 139 NKLITVSPDTKVLRAMQLMTGHML--LP 164
+I V D M LMT H L LP
Sbjct: 79 TAVIYVRADQTTDECMALMTRHRLRHLP 106
>gi|344208487|ref|YP_004793628.1| signal transduction protein with CBS domains [Stenotrophomonas
maltophilia JV3]
gi|343779849|gb|AEM52402.1| putative signal transduction protein with CBS domains
[Stenotrophomonas maltophilia JV3]
Length = 143
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 56/84 (66%), Gaps = 5/84 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T V +IMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMT 77
Query: 137 EENKLITVSPDTKVLRAMQLMTGH 160
+ ++TVSP KV +QL+T +
Sbjct: 78 AQ--VVTVSPGEKVEHCLQLVTDY 99
>gi|384428861|ref|YP_005638221.1| hypothetical protein XCR_3239 [Xanthomonas campestris pv. raphani
756C]
gi|341937964|gb|AEL08103.1| CBS domain protein [Xanthomonas campestris pv. raphani 756C]
Length = 128
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 57/84 (67%), Gaps = 5/84 (5%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
D V +A++ M ++GA++V++ GE+ + GI++ERDY RK++++ RSS ST V +I
Sbjct: 5 AADAAVIEAIRLMADKSIGAVLVME-GER--LVGIVSERDYARKVVLRDRSSSSTSVAEI 61
Query: 135 MTEENKLITVSPDTKVLRAMQLMT 158
M+ + ++TVSP V MQLMT
Sbjct: 62 MS--HAVVTVSPADSVEHCMQLMT 83
>gi|384420129|ref|YP_005629489.1| hypothetical protein XOC_3226 [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|353463042|gb|AEQ97321.1| CBS domain protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 142
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 5/87 (5%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+D V +A+ M + VGA++V+ + + GI++ERDY RK++++ RSS +T V
Sbjct: 16 FAVASDAAVIEAIGLMAEKAVGAVLVM---DGPRLVGIVSERDYARKVVLRDRSSSTTSV 72
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMT 158
+IM+ E ++TVSP V R MQLMT
Sbjct: 73 AEIMSAE--VVTVSPSDTVERCMQLMT 97
>gi|255319571|ref|ZP_05360784.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter
radioresistens SK82]
gi|262379869|ref|ZP_06073025.1| CBS domain pair family protein [Acinetobacter radioresistens SH164]
gi|421465283|ref|ZP_15913971.1| CBS domain protein [Acinetobacter radioresistens WC-A-157]
gi|255303369|gb|EET82573.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter
radioresistens SK82]
gi|262299326|gb|EEY87239.1| CBS domain pair family protein [Acinetobacter radioresistens SH164]
gi|400204545|gb|EJO35529.1| CBS domain protein [Acinetobacter radioresistens WC-A-157]
Length = 143
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 65/113 (57%), Gaps = 10/113 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+S +L K + A + + TV +A+ M +GAL+V +++ V GI++ER
Sbjct: 2 TTVSQVLHNKTEKA---IFTISPEATVLEAISLMANKGIGALIVT---DEQRVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RK+ + RSS +T V +IMT NK++TV + V +QLMT L LP
Sbjct: 56 DYTRKVALMERSSYNTTVSEIMT--NKVLTVGLNNTVEDCLQLMTDRHLRHLP 106
>gi|289626325|ref|ZP_06459279.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
str. NCPPB 3681]
gi|422583462|ref|ZP_16658586.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330868293|gb|EGH03002.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 146
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + N+GAL VV E + G+++ERDY RK+I++GRSS T V +IM+
Sbjct: 24 DQMVLDALRLMAEKNIGALPVV---EGNVMVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
NK+ITV V M +MT
Sbjct: 81 --NKVITVDSQQSVEACMGIMT 100
>gi|294667435|ref|ZP_06732652.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292602768|gb|EFF46202.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 119
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 53/77 (68%), Gaps = 5/77 (6%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKL 141
+A++ M + VGA++V+ E + GI++ERDY RK++++ RSS +T V +IM+ E +
Sbjct: 3 EAIRLMAEKAVGAVLVM---EGPRLVGIVSERDYARKVVLRDRSSSTTSVAEIMSAE--V 57
Query: 142 ITVSPDTKVLRAMQLMT 158
+TVSP V R MQLMT
Sbjct: 58 VTVSPSDTVERCMQLMT 74
>gi|169633658|ref|YP_001707394.1| hypothetical protein ABSDF2087 [Acinetobacter baumannii SDF]
gi|169152450|emb|CAP01415.1| conserved hypothetical protein [Acinetobacter baumannii]
Length = 143
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 65/113 (57%), Gaps = 10/113 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T + ++K K + A + + TV +A+ M + +GALVV + GEQ V GI++ER
Sbjct: 2 TIAAQVIKNKSEQA---IFTISPEATVLEAITIMAEKGIGALVVAE-GEQ--VVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RK+ + RSS ST V +IMT K+ITV + V +QLMT L LP
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMT--AKVITVGLNNTVEECLQLMTDRHLRHLP 106
>gi|254437635|ref|ZP_05051129.1| hypothetical protein OA307_2505 [Octadecabacter antarcticus 307]
gi|198253081|gb|EDY77395.1| hypothetical protein OA307_2505 [Octadecabacter antarcticus 307]
Length = 168
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
L C+ D +++DAV SM++ N GA++VV P K V G++TERD + K++ ++ T V
Sbjct: 13 LTCSPDTSIFDAVTSMSEKNFGAVIVVDP--DKKVLGVVTERDVMNKLVALELDARKTAV 70
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGH 160
DIMT++ ++ + S D +L +++M+
Sbjct: 71 SDIMTKDPRVASESDD--MLDWLRIMSNE 97
>gi|398842413|ref|ZP_10599596.1| CBS domain-containing protein [Pseudomonas sp. GM102]
gi|398105786|gb|EJL95861.1| CBS domain-containing protein [Pseudomonas sp. GM102]
Length = 146
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A++ M + N+GAL VV+ G+ V GI++ERDY RK+++QGRSS T V DIM+
Sbjct: 24 DQMVLEAIRVMAERNIGALPVVENGK---VIGIVSERDYARKMVLQGRSSAGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+ITV ++ M +MT
Sbjct: 81 --FPVITVDARQRIEDCMGIMT 100
>gi|409097786|ref|ZP_11217810.1| hypothetical protein PagrP_05001 [Pedobacter agri PB92]
Length = 142
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 53/80 (66%), Gaps = 5/80 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+V DA+K MT N+ A++V+K + ++GI TERDY RKII+QG+SSK T + ++MT
Sbjct: 23 SVLDALKVMTDKNISAVLVMK---NEKLSGIFTERDYARKIILQGKSSKDTLINEVMTPN 79
Query: 139 NKLITVSPDTKVLRAMQLMT 158
IT++ + M+LMT
Sbjct: 80 P--ITITLSDSIDYCMELMT 97
>gi|21232293|ref|NP_638210.1| hypothetical protein XCC2862 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66767573|ref|YP_242335.1| hypothetical protein XC_1246 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188990688|ref|YP_001902698.1| hypothetical protein xccb100_1292 [Xanthomonas campestris pv.
campestris str. B100]
gi|21114059|gb|AAM42134.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572905|gb|AAY48315.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732448|emb|CAP50642.1| Conserved hypothetical protein [Xanthomonas campestris pv.
campestris]
Length = 142
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
D V +A++ M ++GA++V+ E + + GI++ERDY RK++++ RSS ST V +I
Sbjct: 19 AADAAVIEAIRLMADKSIGAVLVM---EGERLVGIVSERDYARKVVLRDRSSSSTSVAEI 75
Query: 135 MTEENKLITVSPDTKVLRAMQLMT 158
M+ + ++TVSP V MQLMT
Sbjct: 76 MS--HAVVTVSPADSVEHCMQLMT 97
>gi|339324215|ref|YP_004683908.1| inosine-5'-monophosphate dehydrogenase [Cupriavidus necator N-1]
gi|338164372|gb|AEI75427.1| inosine-5'-monophosphate dehydrogenase GuaB [Cupriavidus necator
N-1]
Length = 146
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + +GAL+V++ G ++ GI++ERDY RK+I+ R+S+ T V DIMT
Sbjct: 24 TVYAALQLMAEKGIGALLVIEHG---AIQGIVSERDYARKVILMQRTSRETLVRDIMT-- 78
Query: 139 NKLITVSPDTKVLRAMQLMTGHML 162
N +I V M LMT H L
Sbjct: 79 NAVIYVGASQTTDECMALMTRHRL 102
>gi|66803685|ref|XP_635678.1| hypothetical protein DDB_G0290595 [Dictyostelium discoideum AX4]
gi|60463995|gb|EAL62158.1| hypothetical protein DDB_G0290595 [Dictyostelium discoideum AX4]
Length = 228
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGII 110
++ T + I++ K + G + ++TVY+A+K M VGA +VV + + GI
Sbjct: 79 YKDTQVGAIIEEKIRNNLGRMVKVGENETVYNAIKVMNDKKVGATIVVDRNNR--MCGIF 136
Query: 111 TERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ERDYL K+ ++G S K T V D+ T++ +ITVS D+ + + +M+
Sbjct: 137 SERDYLSKVDLRGLSPKETLVKDVCTKQ--IITVSSDSGATKCLSIMS 182
>gi|239503946|ref|ZP_04663256.1| CBS domain pair family protein [Acinetobacter baumannii AB900]
gi|421677002|ref|ZP_16116896.1| CBS domain protein [Acinetobacter baumannii OIFC111]
gi|410393659|gb|EKP46011.1| CBS domain protein [Acinetobacter baumannii OIFC111]
Length = 143
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K + A + + TV +A+ M + +GALVV + GEQ V GI++ER
Sbjct: 2 TIVAQVIKNKSEQA---IFTISPEATVLEAITIMAEKGIGALVVAE-GEQ--VVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RK+ + RSS ST V +IMT K+ITV + V ++LMT L LP
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMT--AKVITVGLNNTVEECLRLMTDRHLRHLP 106
>gi|421857085|ref|ZP_16289440.1| hypothetical protein ACRAD_32_00140 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
gi|403187424|dbj|GAB75641.1| hypothetical protein ACRAD_32_00140 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
Length = 143
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 10/113 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+S +L K + A + + TV +A+ M +GAL++ +++ V GI++ER
Sbjct: 2 TTVSQVLHNKTEKA---IFTISPEATVLEAISLMANKGIGALIIT---DEQRVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RK+ + RSS +T V +IMT NK++TV + V +QLMT L LP
Sbjct: 56 DYTRKVALMERSSYNTTVSEIMT--NKVLTVGLNNTVEDCLQLMTDRHLRHLP 106
>gi|406039484|ref|ZP_11046839.1| hypothetical protein AursD1_06641 [Acinetobacter ursingii DSM 16037
= CIP 107286]
Length = 143
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ +++ K A+ + + D TV +A+ M + +GALVV + E V GI++ER
Sbjct: 2 TNVAQVIQDK---AEQAIYTVSPDATVLEAISIMAEKGIGALVVTQDNE---VVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RK+ + RSS T V +IMT K++T+S V +QLMT L LP
Sbjct: 56 DYTRKVALMERSSYDTTVSEIMTA--KVLTISRSNTVEECLQLMTDRHLRHLP 106
>gi|350545690|ref|ZP_08915153.1| FOG: CBS domain [Candidatus Burkholderia kirkii UZHbot1]
gi|350526536|emb|CCD40224.1| FOG: CBS domain [Candidatus Burkholderia kirkii UZHbot1]
Length = 167
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L +K D + +V+DA+K M ++GA++V + E + GI+TERD
Sbjct: 23 TVAQVLNSK---PDQTVYTIAATASVFDAIKLMADKHIGAVIVTEGDE---IVGIMTERD 76
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK+++ R+SK T V DIMT + V PD M LMT
Sbjct: 77 YARKVVLMDRASKQTPVHDIMTSHVRY--VRPDQTTDDCMALMT 118
>gi|389684621|ref|ZP_10175949.1| CBS domain protein [Pseudomonas chlororaphis O6]
gi|388551844|gb|EIM15109.1| CBS domain protein [Pseudomonas chlororaphis O6]
Length = 146
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A++ M Q NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V IM+
Sbjct: 24 DQMVLEALQMMAQKNVGALPVIEAGQ---VVGVISERDYARKVVLQGRSSVGTPVRAIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
++T + R M +MT
Sbjct: 81 --APVVTADSQHSIERCMAVMT 100
>gi|413962639|ref|ZP_11401866.1| signal-transduction protein [Burkholderia sp. SJ98]
gi|413928471|gb|EKS67759.1| signal-transduction protein [Burkholderia sp. SJ98]
Length = 168
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 65/105 (61%), Gaps = 8/105 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
+T+ +LKAK D + + +VY+A+ M++ VGALVVV G+ +V GI+TER
Sbjct: 2 STVKQVLKAK---RDTTVHTIDAEASVYEAIALMSRAEVGALVVVV-GD--AVCGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
DY RK+I+Q + S++T V +IMT +++VS T M LMT
Sbjct: 56 DYARKVILQDKVSRTTTVCEIMT--APVMSVSLGTSADECMTLMT 98
>gi|456734307|gb|EMF59123.1| Inosine-5'-monophosphate dehydrogenase [Stenotrophomonas
maltophilia EPM1]
Length = 143
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 56/84 (66%), Gaps = 5/84 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T V +IMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMT 77
Query: 137 EENKLITVSPDTKVLRAMQLMTGH 160
+++TVSP +V +QL+T +
Sbjct: 78 --TQVVTVSPGEQVEHCLQLVTDY 99
>gi|374366874|ref|ZP_09624947.1| hypothetical protein OR16_13184 [Cupriavidus basilensis OR16]
gi|373101560|gb|EHP42608.1| hypothetical protein OR16_13184 [Cupriavidus basilensis OR16]
Length = 147
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + +GAL+V++ G+ + GI++ERDY RK+I+ R+S+ T V DIMT
Sbjct: 24 TVYAALQLMAEKGIGALLVIERGD---IVGILSERDYARKVILMSRTSRETFVRDIMT-- 78
Query: 139 NKLITVSPDTKVLRAMQLMTGH 160
+ +I V D M LMT H
Sbjct: 79 SAVIYVRGDQSTDECMALMTQH 100
>gi|377813056|ref|YP_005042305.1| putative signal-transduction protein with CBS domains [Burkholderia
sp. YI23]
gi|357937860|gb|AET91418.1| putative signal-transduction protein with CBS domains [Burkholderia
sp. YI23]
Length = 146
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L +K D + +V+DA+K M ++GA++V + E + GI+TERD
Sbjct: 3 TVAQVLNSK---PDQTVYTVAATASVFDAIKLMADKHIGAVIVTEGDE---IVGIMTERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK+++ R+SK T V DIMT + + V PD M LMT
Sbjct: 57 YARKVVLMDRASKQTPVRDIMTSQVRY--VRPDQTTDDCMALMT 98
>gi|424669809|ref|ZP_18106834.1| hypothetical protein A1OC_03424 [Stenotrophomonas maltophilia
Ab55555]
gi|401071880|gb|EJP80391.1| hypothetical protein A1OC_03424 [Stenotrophomonas maltophilia
Ab55555]
Length = 143
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 56/84 (66%), Gaps = 5/84 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T V +IMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMT 77
Query: 137 EENKLITVSPDTKVLRAMQLMTGH 160
+++TVSP +V +QL+T +
Sbjct: 78 --TQVVTVSPGEEVEHCLQLVTDY 99
>gi|49076464|gb|AAT49566.1| PA0250, partial [synthetic construct]
Length = 145
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 10/112 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L AK + D+ V DA++ M + N+GAL+VV GE V G+++ERD
Sbjct: 3 TVAQLLNAK---QNQQVYTIGADEMVLDALRLMAEKNIGALLVVNHGE---VVGVVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
Y RK++++GRSS T + IM+ +++V V M LMT L LP
Sbjct: 57 YARKMVLKGRSSIGTPISAIMSA--PVVSVDSKQSVDTCMNLMTDRHLRHLP 106
>gi|392967743|ref|ZP_10333159.1| putative signal transduction protein with CBS domains [Fibrisoma
limi BUZ 3]
gi|387842105|emb|CCH55213.1| putative signal transduction protein with CBS domains [Fibrisoma
limi BUZ 3]
Length = 145
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 59/96 (61%), Gaps = 6/96 (6%)
Query: 63 KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122
+GK + + T++ TV +A++ M N+GA++VV G+ + GI +ERDY RK I++
Sbjct: 8 QGKAVNALY-TVTSNQTVLEALELMADKNIGAVLVVDDGQ---LTGIFSERDYARKGILK 63
Query: 123 GRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
GR S T + ++MT +IT+ PD ++ M +M+
Sbjct: 64 GRHSADTSISEVMTPH--VITIEPDQRLDECMVIMS 97
>gi|85710703|ref|ZP_01041767.1| putative signal-transduction protein with CBS domains
[Erythrobacter sp. NAP1]
gi|85687881|gb|EAQ27886.1| putative signal-transduction protein with CBS domains
[Erythrobacter sp. NAP1]
Length = 172
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
L CT D V+DAV M + N G++ V P + V G++TERD R++I R K+T V
Sbjct: 16 LTCTPDTIVFDAVTQMAEKNFGSIFVTDPDNR--VLGVMTERDIFRRVIGASRDPKTTPV 73
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGH 160
++MT E + D ++L MQ+M+
Sbjct: 74 SEVMTTEVR--AAHKDDQILDWMQIMSNE 100
>gi|328872298|gb|EGG20665.1| hypothetical protein DFA_00526 [Dictyostelium fasciculatum]
Length = 244
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 8/113 (7%)
Query: 50 GFESTTISDILKAKGKGADG----SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKS 105
GF + IS +L KG G + + +DTV A+K M + VGA++VV Q
Sbjct: 82 GFVDSKISSLLAQKGLPLKGQQAPNIIRVRENDTVLTAIKQMHTNKVGAVIVV--DSQNK 139
Query: 106 VAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ GI +ERDYL + V+ SK T V D+MT ++TV DT + M++M+
Sbjct: 140 MTGIFSERDYLNSLAVRDLKSKDTYVKDVMT--TPVVTVRLDTSTAKCMKIMS 190
>gi|73539746|ref|YP_294266.1| hypothetical protein Reut_A0040 [Ralstonia eutropha JMP134]
gi|72117159|gb|AAZ59422.1| CBS [Ralstonia eutropha JMP134]
Length = 146
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + +GA++V++ G+ + GI++ERDY RK+I+ RSS+ T V DIMT
Sbjct: 24 TVYAALQLMAEKGIGAVLVMEHGK---IVGILSERDYARKVILMQRSSRDTLVRDIMT-- 78
Query: 139 NKLITVSPDTKVLRAMQLMTGH 160
+ +I VS D M LMT H
Sbjct: 79 SSVIYVSGDQSTDECMALMTKH 100
>gi|386719569|ref|YP_006185895.1| FOG: CBS domain [Stenotrophomonas maltophilia D457]
gi|384079131|emb|CCH13727.1| FOG: CBS domain [Stenotrophomonas maltophilia D457]
Length = 136
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 56/84 (66%), Gaps = 5/84 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T V +IMT
Sbjct: 14 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMT 70
Query: 137 EENKLITVSPDTKVLRAMQLMTGH 160
+++TVSP +V +QL+T +
Sbjct: 71 --AQVVTVSPGEQVEHCLQLVTDY 92
>gi|15595447|ref|NP_248941.1| hypothetical protein PA0250 [Pseudomonas aeruginosa PAO1]
gi|218888991|ref|YP_002437855.1| putative CBS domain [Pseudomonas aeruginosa LESB58]
gi|254237513|ref|ZP_04930836.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254243349|ref|ZP_04936671.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|418583816|ref|ZP_13147884.1| putative CBS domain protein [Pseudomonas aeruginosa MPAO1/P1]
gi|418594207|ref|ZP_13158019.1| putative CBS domain protein [Pseudomonas aeruginosa MPAO1/P2]
gi|420136594|ref|ZP_14644637.1| hypothetical protein PACIG1_0140 [Pseudomonas aeruginosa CIG1]
gi|421151184|ref|ZP_15610809.1| hypothetical protein PABE171_0154 [Pseudomonas aeruginosa ATCC
14886]
gi|421157237|ref|ZP_15616627.1| hypothetical protein PABE173_0256 [Pseudomonas aeruginosa ATCC
25324]
gi|421168865|ref|ZP_15626921.1| hypothetical protein PABE177_3707 [Pseudomonas aeruginosa ATCC
700888]
gi|421181478|ref|ZP_15638977.1| hypothetical protein PAE2_3441 [Pseudomonas aeruginosa E2]
gi|421514863|ref|ZP_15961549.1| putative CBS domain protein [Pseudomonas aeruginosa PAO579]
gi|424943371|ref|ZP_18359134.1| putative CBS domain [Pseudomonas aeruginosa NCMG1179]
gi|451983277|ref|ZP_21931569.1| CBS domain protein [Pseudomonas aeruginosa 18A]
gi|9946090|gb|AAG03639.1|AE004463_4 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|126169444|gb|EAZ54955.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126196727|gb|EAZ60790.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218769214|emb|CAW24974.1| putative CBS domain [Pseudomonas aeruginosa LESB58]
gi|346059817|dbj|GAA19700.1| putative CBS domain [Pseudomonas aeruginosa NCMG1179]
gi|375044722|gb|EHS37315.1| putative CBS domain protein [Pseudomonas aeruginosa MPAO1/P2]
gi|375046794|gb|EHS39350.1| putative CBS domain protein [Pseudomonas aeruginosa MPAO1/P1]
gi|403250656|gb|EJY64069.1| hypothetical protein PACIG1_0140 [Pseudomonas aeruginosa CIG1]
gi|404348591|gb|EJZ74928.1| putative CBS domain protein [Pseudomonas aeruginosa PAO579]
gi|404527814|gb|EKA37946.1| hypothetical protein PABE171_0154 [Pseudomonas aeruginosa ATCC
14886]
gi|404528367|gb|EKA38468.1| hypothetical protein PABE177_3707 [Pseudomonas aeruginosa ATCC
700888]
gi|404543595|gb|EKA52852.1| hypothetical protein PAE2_3441 [Pseudomonas aeruginosa E2]
gi|404550813|gb|EKA59529.1| hypothetical protein PABE173_0256 [Pseudomonas aeruginosa ATCC
25324]
gi|451759075|emb|CCQ84092.1| CBS domain protein [Pseudomonas aeruginosa 18A]
Length = 144
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 8/108 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L AK + D+ V DA++ M + N+GAL+VV GE V G+++ERD
Sbjct: 3 TVAQLLNAK---QNQQVYTIGADEMVLDALRLMAEKNIGALLVVNHGE---VVGVVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
Y RK++++GRSS T + IM+ +++V V M LMT L
Sbjct: 57 YARKMVLKGRSSIGTPISAIMSA--PVVSVDSKQSVDTCMNLMTDRHL 102
>gi|422650577|ref|ZP_16713380.1| CBS domain-containing protein [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|330963663|gb|EGH63923.1| CBS domain-containing protein [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 146
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ V DA++ M N+GAL VV+ G +V G+++ERDY RK++++GRSS T V +IM+
Sbjct: 24 NQMVLDALRLMADKNIGALPVVENG---TVVGVVSERDYARKVVLEGRSSVGTPVSEIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+K+ITV+ V M +MT
Sbjct: 81 --SKVITVNSQQTVETCMGIMT 100
>gi|254525290|ref|ZP_05137345.1| CBS domain containing protein [Stenotrophomonas sp. SKA14]
gi|219722881|gb|EED41406.1| CBS domain containing protein [Stenotrophomonas sp. SKA14]
Length = 143
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 56/84 (66%), Gaps = 5/84 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T V +IMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGARLVGILSERDYARKIVLRDRSSRDTAVAEIMT 77
Query: 137 EENKLITVSPDTKVLRAMQLMTGH 160
+++TVSP +V +QL+T +
Sbjct: 78 --AQVVTVSPGEQVEHCLQLVTDY 99
>gi|194366828|ref|YP_002029438.1| putative signal transduction protein [Stenotrophomonas maltophilia
R551-3]
gi|194349632|gb|ACF52755.1| putative signal-transduction protein with CBS domains
[Stenotrophomonas maltophilia R551-3]
Length = 143
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 56/84 (66%), Gaps = 5/84 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T V +IMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMT 77
Query: 137 EENKLITVSPDTKVLRAMQLMTGH 160
+++TVSP +V +QL+T +
Sbjct: 78 --AQVVTVSPGEQVEHCLQLVTDY 99
>gi|120610791|ref|YP_970469.1| hypothetical protein Aave_2114 [Acidovorax citrulli AAC00-1]
gi|120589255|gb|ABM32695.1| CBS domain containing membrane protein [Acidovorax citrulli
AAC00-1]
Length = 149
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 6/89 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++DIL++K A D++ DA++ M +GAL+V+ GE+ +AGI+TER
Sbjct: 2 TAVADILRSK---AHQEVFTIAPSDSMLDALRLMADKGIGALLVMD-GER--IAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLI 142
DY RK+ + GR+S T+V D+MT + +
Sbjct: 56 DYARKVALLGRTSGDTRVADVMTRAVRFV 84
>gi|421746846|ref|ZP_16184610.1| hypothetical protein B551_09076 [Cupriavidus necator HPC(L)]
gi|409774585|gb|EKN56187.1| hypothetical protein B551_09076 [Cupriavidus necator HPC(L)]
Length = 145
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 7/88 (7%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + ++GAL+V++ G+ + GI++ERDY RK+I+ R+S+ T V DIMT
Sbjct: 24 TVYAALQLMAEKSIGALLVMEHGK---IVGILSERDYARKVILMQRTSRETFVRDIMT-- 78
Query: 139 NKLITVSPDTKVLRAMQLMTGHML--LP 164
++ V D M LMT H L LP
Sbjct: 79 TAVVYVRADQTTDECMALMTQHRLRHLP 106
>gi|87198179|ref|YP_495436.1| signal-transduction protein [Novosphingobium aromaticivorans DSM
12444]
gi|87133860|gb|ABD24602.1| putative signal-transduction protein with CBS domains
[Novosphingobium aromaticivorans DSM 12444]
Length = 142
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 15/107 (14%)
Query: 55 TISDILKAKGKGADGSWLW-CTTDDTVYDAVKSMTQHNVGALVVVKPGEQ--KSVAGIIT 111
TI+ ++ +G+ +W C DD+V DAV + ++ +GAL P E VAGI +
Sbjct: 2 TIAQVIAGRGE------VWSCHADDSVADAVDMLARYRIGAL----PVEDGTNGVAGIFS 51
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
ERD +R + G ++ KV D+MT ++T++P T VL A+ LMT
Sbjct: 52 ERDMIRCLHKHGEAALHMKVRDMMT--APVVTITPQTSVLEALALMT 96
>gi|107099239|ref|ZP_01363157.1| hypothetical protein PaerPA_01000250 [Pseudomonas aeruginosa PACS2]
gi|116053963|ref|YP_788401.1| hypothetical protein PA14_03090 [Pseudomonas aeruginosa UCBPP-PA14]
gi|296386735|ref|ZP_06876234.1| CBS domain-containing protein [Pseudomonas aeruginosa PAb1]
gi|313112175|ref|ZP_07797954.1| putative CBS domain-containing protein [Pseudomonas aeruginosa
39016]
gi|355646413|ref|ZP_09054412.1| hypothetical protein HMPREF1030_03498 [Pseudomonas sp. 2_1_26]
gi|386056315|ref|YP_005972837.1| putative CBS domain-containing protein [Pseudomonas aeruginosa M18]
gi|386063229|ref|YP_005978533.1| hypothetical protein NCGM2_0256 [Pseudomonas aeruginosa NCGM2.S1]
gi|392981658|ref|YP_006480245.1| hypothetical protein PADK2_01240 [Pseudomonas aeruginosa DK2]
gi|416864807|ref|ZP_11915531.1| CBS domain-containing protein [Pseudomonas aeruginosa 138244]
gi|416882033|ref|ZP_11921757.1| CBS domain-containing protein [Pseudomonas aeruginosa 152504]
gi|419756542|ref|ZP_14282890.1| hypothetical protein CF510_26438 [Pseudomonas aeruginosa
PADK2_CF510]
gi|421171943|ref|ZP_15629730.1| hypothetical protein PACI27_0206 [Pseudomonas aeruginosa CI27]
gi|115589184|gb|ABJ15199.1| putative CBS domain [Pseudomonas aeruginosa UCBPP-PA14]
gi|310884456|gb|EFQ43050.1| putative CBS domain-containing protein [Pseudomonas aeruginosa
39016]
gi|334834902|gb|EGM13819.1| CBS domain-containing protein [Pseudomonas aeruginosa 138244]
gi|334835425|gb|EGM14301.1| CBS domain-containing protein [Pseudomonas aeruginosa 152504]
gi|347302621|gb|AEO72735.1| putative CBS domain protein [Pseudomonas aeruginosa M18]
gi|348031788|dbj|BAK87148.1| CBS domain-containing protein [Pseudomonas aeruginosa NCGM2.S1]
gi|354828553|gb|EHF12671.1| hypothetical protein HMPREF1030_03498 [Pseudomonas sp. 2_1_26]
gi|384397074|gb|EIE43489.1| hypothetical protein CF510_26438 [Pseudomonas aeruginosa
PADK2_CF510]
gi|392317163|gb|AFM62543.1| CBS domain-containing protein [Pseudomonas aeruginosa DK2]
gi|404538684|gb|EKA48207.1| hypothetical protein PACI27_0206 [Pseudomonas aeruginosa CI27]
gi|453045303|gb|EME93023.1| hypothetical protein H123_17208 [Pseudomonas aeruginosa PA21_ST175]
Length = 144
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 8/108 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L AK + D+ V DA++ M + N+GAL+VV GE V G+++ERD
Sbjct: 3 TVAQLLNAK---QNQQVYTIGPDEMVLDALRLMAEKNIGALLVVNHGE---VVGVVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
Y RK++++GRSS T + IM+ +++V V M LMT L
Sbjct: 57 YARKMVLKGRSSIGTPISAIMSA--PVVSVDSKQSVDTCMNLMTDRHL 102
>gi|449018296|dbj|BAM81698.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 260
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 16/102 (15%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVA----GIITERDYLRKIIVQGRSSKST--- 129
+DT+ +A+K M HN+G L+VV+ +Q A GII+ERD R +I +G S ++
Sbjct: 116 NDTMQNALKKMFIHNIGCLLVVEQPQQNDEACKPVGIISERDLTRLLISRGSSGAASAGR 175
Query: 130 ---------KVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
KV + MT+ N LI+V+PDT + ++LM L
Sbjct: 176 TTADLLLTVKVHEFMTKANALISVTPDTDLASVLELMASRRL 217
>gi|422298489|ref|ZP_16386089.1| CBS domain-containing protein [Pseudomonas avellanae BPIC 631]
gi|422589447|ref|ZP_16664109.1| CBS domain-containing protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330876235|gb|EGH10384.1| CBS domain-containing protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|407989823|gb|EKG32058.1| CBS domain-containing protein [Pseudomonas avellanae BPIC 631]
Length = 146
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ V DA++ M N+GAL VV+ G +V G+++ERDY RK++++GRSS T V +IM+
Sbjct: 24 NQMVLDALRLMADKNIGALPVVENG---TVVGVVSERDYARKVVLKGRSSVGTPVSEIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+K+ITV+ V M +MT
Sbjct: 81 --SKVITVNSQQTVETCMGIMT 100
>gi|398922492|ref|ZP_10660300.1| CBS domain-containing protein [Pseudomonas sp. GM49]
gi|398162684|gb|EJM50870.1| CBS domain-containing protein [Pseudomonas sp. GM49]
Length = 146
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + NVGAL V+ EQ V G+I+ERDY RK+++QGRSS T V IM+
Sbjct: 24 DQMVLEALKLMAEKNVGALPVM---EQGQVVGVISERDYARKVVLQGRSSVGTPVRAIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
++T + R M +MT
Sbjct: 81 --APVVTADSQQSIERCMAVMT 100
>gi|56478309|ref|YP_159898.1| hypothetical protein ebB175 [Aromatoleum aromaticum EbN1]
gi|56314352|emb|CAI08997.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 147
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+++ ILK K D + D +V+DA+ M +HNVGAL+V+ E + +AGI++ERD
Sbjct: 3 SVAAILKEK---PDPTVHTIGPDASVFDALGRMAEHNVGALLVM---EGERLAGIVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK+I+ RSS+ V IM+ + ++ VS + M LMT
Sbjct: 57 YARKVILLARSSRDLTVSAIMS--SPVMYVSLNQTNEECMALMT 98
>gi|399007025|ref|ZP_10709541.1| CBS domain-containing protein [Pseudomonas sp. GM17]
gi|398120982|gb|EJM10625.1| CBS domain-containing protein [Pseudomonas sp. GM17]
Length = 146
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A++ M Q NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V IM+
Sbjct: 24 DQMVLEALQMMAQKNVGALPVMEAGQ---VVGVISERDYARKVVLQGRSSVGTPVRAIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
++T + R M +MT
Sbjct: 81 --APVVTADSQHSIERCMAVMT 100
>gi|395797325|ref|ZP_10476615.1| hypothetical protein A462_18689 [Pseudomonas sp. Ag1]
gi|421139918|ref|ZP_15599943.1| CBS domain protein [Pseudomonas fluorescens BBc6R8]
gi|395338425|gb|EJF70276.1| hypothetical protein A462_18689 [Pseudomonas sp. Ag1]
gi|404508933|gb|EKA22878.1| CBS domain protein [Pseudomonas fluorescens BBc6R8]
Length = 146
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 6/104 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK+K + + D TV++A+ M NVGAL V++ G+ V GII+ERD
Sbjct: 3 TVAQVLKSKDQ-HNHQVHTIPHDHTVFEALIVMASKNVGALPVLQDGK---VVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK+I+ G SS +TK +IM + +ITV V M +MT
Sbjct: 59 YARKVILHGLSSVTTKAHEIMN--SPVITVDTHQTVETCMTIMT 100
>gi|28869810|ref|NP_792429.1| hypothetical protein PSPTO_2620 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213969942|ref|ZP_03398075.1| CBS domain protein [Pseudomonas syringae pv. tomato T1]
gi|301382215|ref|ZP_07230633.1| CBS domain protein [Pseudomonas syringae pv. tomato Max13]
gi|302061328|ref|ZP_07252869.1| CBS domain protein [Pseudomonas syringae pv. tomato K40]
gi|302134267|ref|ZP_07260257.1| CBS domain protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|422656000|ref|ZP_16718448.1| CBS domain protein [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|28853055|gb|AAO56124.1| CBS domain protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213925267|gb|EEB58829.1| CBS domain protein [Pseudomonas syringae pv. tomato T1]
gi|331014472|gb|EGH94528.1| CBS domain protein [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 146
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%), Gaps = 5/79 (6%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
V DA++ M N+GAL VV+ G +V G+++ERDY RK++++GRSS T V +IM+ +
Sbjct: 27 VLDALRLMADKNIGALPVVENG---TVVGVVSERDYARKVVLKGRSSVGTPVSEIMS--S 81
Query: 140 KLITVSPDTKVLRAMQLMT 158
K+ITV V M +MT
Sbjct: 82 KVITVDSQQTVETCMGIMT 100
>gi|395497949|ref|ZP_10429528.1| hypothetical protein PPAM2_17784 [Pseudomonas sp. PAMC 25886]
Length = 146
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK+K + + D TV++A+ M NVGAL V++ G+ V GII+ERD
Sbjct: 3 TVAQVLKSKDQ-QNQQVHTIPHDHTVFEALIVMASKNVGALPVLQDGK---VVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
Y RK+I+ G SS +TK +IM + +ITV V M +MT L
Sbjct: 59 YARKVILHGLSSVATKAHEIMN--SPVITVDTHQTVETCMTIMTDRHL 104
>gi|398993134|ref|ZP_10696090.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM21]
gi|398135560|gb|EJM24673.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM21]
Length = 146
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V IM+
Sbjct: 24 DQMVLEALKMMAEKNVGALPVIEDGQ---VVGVISERDYARKVVLQGRSSVGTPVRAIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
++T + R M +MT
Sbjct: 81 --APVVTADSQQSIERCMVVMT 100
>gi|152982340|ref|YP_001355250.1| hypothetical protein mma_3560 [Janthinobacterium sp. Marseille]
gi|151282417|gb|ABR90827.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 142
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 11/105 (10%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+S +L K K L T T + DA+K M H+VGA+VV+ G+ + GI++ER
Sbjct: 3 TVSQLLMLKNKS-----LCSTCSRTPLIDALKIMAVHDVGAMVVIDEGK---LVGILSER 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
DY RK+ + +SS VGDIMT +++ TVS + V M LM+
Sbjct: 55 DYARKVALANKSSTDICVGDIMT--SRVTTVSKEHTVEECMTLMS 97
>gi|152986795|ref|YP_001345731.1| hypothetical protein PSPA7_0335 [Pseudomonas aeruginosa PA7]
gi|452877772|ref|ZP_21955028.1| hypothetical protein G039_12481 [Pseudomonas aeruginosa VRFPA01]
gi|150961953|gb|ABR83978.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
gi|452185497|gb|EME12515.1| hypothetical protein G039_12481 [Pseudomonas aeruginosa VRFPA01]
Length = 144
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 8/108 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L AK + D+ V DA++ M + N+GAL+V+ GE V G+++ERD
Sbjct: 3 TVAQLLNAK---QNQQVYTIGPDEMVLDALRLMAEKNIGALLVLNHGE---VVGVVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
Y RK++++GRSS T + IM+ +++V V M LMT L
Sbjct: 57 YARKMVLKGRSSIGTPISAIMSA--PVVSVDSKQSVDTCMNLMTDRHL 102
>gi|425899648|ref|ZP_18876239.1| CBS domain protein [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|397890377|gb|EJL06859.1| CBS domain protein [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
Length = 146
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A++ M Q NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V IM+
Sbjct: 24 DQMVLEALQMMAQKNVGALPVMEAGQ---VVGVISERDYARKVVLQGRSSVGTPVRVIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
++T + R M +MT
Sbjct: 81 --APVVTADSQHSIERCMAVMT 100
>gi|237653431|ref|YP_002889745.1| signal transduction protein with CBS domains [Thauera sp. MZ1T]
gi|237624678|gb|ACR01368.1| putative signal transduction protein with CBS domains [Thauera sp.
MZ1T]
Length = 148
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 7/83 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+ IL+AKG ++ D+V+DA+ M Q ++G ++V + + GI TER
Sbjct: 3 TTVKQILEAKGS----TFHAVRPTDSVFDALSLMAQFDIGCVLVT---DSDKLVGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMT 136
DY RK++++G S+ KVGD+MT
Sbjct: 56 DYARKVVLKGLVSRDVKVGDLMT 78
>gi|413964852|ref|ZP_11404078.1| putative signal-transduction protein with CBS domain [Burkholderia
sp. SJ98]
gi|413927526|gb|EKS66815.1| putative signal-transduction protein with CBS domain [Burkholderia
sp. SJ98]
Length = 146
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L +K D + +V+DA+K M ++GA++V + E + GI+TERD
Sbjct: 3 TVAQVLNSK---PDQTVFTVPATASVFDAIKLMADKHIGAVIVTEGDE---IVGIMTERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK+++ R SK T V DIMT + V PD M LMT
Sbjct: 57 YARKVVLMDRVSKHTPVRDIMTSHVRY--VRPDQTTDDCMALMT 98
>gi|423095419|ref|ZP_17083215.1| CBS domain protein [Pseudomonas fluorescens Q2-87]
gi|397887894|gb|EJL04377.1| CBS domain protein [Pseudomonas fluorescens Q2-87]
Length = 146
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV +A++ M + NVGAL V++ G+ V G+ +ERDY RK+++QGRSS T V IM+
Sbjct: 24 EQTVLEALQIMAEKNVGALPVIENGQ---VVGVFSERDYARKMVLQGRSSVGTPVRTIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+IT + R M++MT
Sbjct: 81 A--PVITADSQQSIDRCMEVMT 100
>gi|50085401|ref|YP_046911.1| hypothetical protein ACIAD2305 [Acinetobacter sp. ADP1]
gi|49531377|emb|CAG69089.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
Length = 143
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 7/90 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D +V +A+ M +GA+VVV E++SV GI++ERDY RK+ + RSS ST V +IMT
Sbjct: 22 DASVLEAISLMADKGIGAIVVV---EKESVVGILSERDYTRKVELMDRSSNSTVVSEIMT 78
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML--LP 164
K+ TV V +QLMT L LP
Sbjct: 79 P--KVFTVDKSYSVEDCLQLMTDRHLRHLP 106
>gi|255533567|ref|YP_003093939.1| hypothetical protein Phep_3686 [Pedobacter heparinus DSM 2366]
gi|255346551|gb|ACU05877.1| CBS domain containing protein [Pedobacter heparinus DSM 2366]
Length = 142
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T + +V DA+K M + N+ AL+V+ + K + GI TERDY RKII+ G+SS T + ++
Sbjct: 19 TENSSVLDALKVMMEKNISALMVL---DGKRLVGIFTERDYARKIILHGKSSAETAIKEV 75
Query: 135 MTEENKLITVSPDTKVLRAMQLMT 158
MT + ITV P + M +MT
Sbjct: 76 MTAQP--ITVLPSDGIDFCMGIMT 97
>gi|325914102|ref|ZP_08176455.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas vesicatoria ATCC 35937]
gi|325539605|gb|EGD11248.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas vesicatoria ATCC 35937]
Length = 135
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 51/72 (70%), Gaps = 5/72 (6%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
M + +GA V+V GE+ + GI++ERDY RK++++ RSS +T V +IM+ ++++TVSP
Sbjct: 24 MAERGIGA-VLVMDGER--LVGIVSERDYARKVVLRDRSSATTSVAEIMS--SQVVTVSP 78
Query: 147 DTKVLRAMQLMT 158
V R MQLMT
Sbjct: 79 SETVERCMQLMT 90
>gi|297539691|ref|YP_003675460.1| putative signal transduction protein [Methylotenera versatilis 301]
gi|297259038|gb|ADI30883.1| putative signal transduction protein with CBS domains
[Methylotenera versatilis 301]
Length = 143
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 56/79 (70%), Gaps = 5/79 (6%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
V+DA+ + ++ +GALVV+ + + G+ +ERDY R+II++G+SSK+T + ++M+ +
Sbjct: 25 VFDALVVLAEYKIGALVVL---DGDKLVGVFSERDYAREIILKGKSSKTTPISEVMS--S 79
Query: 140 KLITVSPDTKVLRAMQLMT 158
++TV P+ V +AM +M+
Sbjct: 80 NVLTVKPNDTVEQAMNIMS 98
>gi|190575499|ref|YP_001973344.1| hypothetical protein Smlt3640 [Stenotrophomonas maltophilia K279a]
gi|190013421|emb|CAQ47056.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
Length = 120
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 54/79 (68%), Gaps = 5/79 (6%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKL 141
DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T V +IMT ++
Sbjct: 3 DAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMT--TQV 57
Query: 142 ITVSPDTKVLRAMQLMTGH 160
+TVSP +V +QL+T +
Sbjct: 58 VTVSPGEQVEHCLQLVTDY 76
>gi|296109539|ref|YP_003616488.1| signal transduction protein with CBS domains [methanocaldococcus
infernus ME]
gi|295434353|gb|ADG13524.1| putative signal transduction protein with CBS domains
[Methanocaldococcus infernus ME]
Length = 184
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
DTVYDA M + ++GA+VVV E K GI+TERD L+K++ + K V ++MT+
Sbjct: 24 DTVYDAANIMCEKDIGAVVVV---ENKKPVGILTERDILKKVVAKNLKPKEVLVEEVMTK 80
Query: 138 ENKLITVSPDTKVLRAMQLMTGH 160
+IT+ +T + A ++M+ H
Sbjct: 81 --NIITIPKNTTLTEAAKIMSKH 101
>gi|294053802|ref|YP_003547460.1| putative signal transduction protein [Coraliomargarita akajimensis
DSM 45221]
gi|293613135|gb|ADE53290.1| putative signal transduction protein with CBS domains
[Coraliomargarita akajimensis DSM 45221]
Length = 151
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 10/105 (9%)
Query: 55 TISDILKAKGKGADGSWLWCTTDD-TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
++ ILK K S + C + TV +AV M + +G+++V + +V GI TER
Sbjct: 7 SVVSILKEKS-----SSVHCVAEQVTVAEAVNEMNRQRIGSILV--KADDGTVTGIFTER 59
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
D L +++ GR ++TKV ++MT + + +++PDT V AMQLMT
Sbjct: 60 DVLVRVVSAGRDPQATKVQEVMTPDFE--SIAPDTSVEDAMQLMT 102
>gi|350561255|ref|ZP_08930094.1| CBS domain containing membrane protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349781362|gb|EGZ35670.1| CBS domain containing membrane protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 142
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 5/80 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+V++A++ M H VGAL V++ G + G+I+ERDY RK+I+ RSS++T V +IM
Sbjct: 23 SVFEALRLMADHEVGALPVLENG---RLVGLISERDYARKVILMDRSSRNTPVREIMM-- 77
Query: 139 NKLITVSPDTKVLRAMQLMT 158
++ V P+ V M LMT
Sbjct: 78 LRVTCVEPERTVEECMALMT 97
>gi|182411839|ref|YP_001816905.1| signal-transduction protein [Opitutus terrae PB90-1]
gi|177839053|gb|ACB73305.1| putative signal-transduction protein with CBS domains [Opitutus
terrae PB90-1]
Length = 147
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 9/105 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
+T IS +L KG ++ TV DAV M +H +G++VV+ E S GI TE
Sbjct: 2 NTPISALLDRKGSVV----FSVPSNVTVCDAVNEMNRHRIGSIVVL---ENSSPIGIFTE 54
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
RD LR+++ +G K T V +MT + IT++P+T + + M L
Sbjct: 55 RDVLRRVVGEGVDPKRTPVNQVMTA--RPITITPETTIEQTMTLF 97
>gi|397565547|gb|EJK44669.1| hypothetical protein THAOC_36775, partial [Thalassiosira oceanica]
Length = 332
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
VYDAV+ +NVG LV +++G+++ERDY+ KI + G++S+ T V +I T+
Sbjct: 202 VYDAVQKFAAYNVGCLVTTD--SDGNISGVVSERDYVCKIALLGKTSRETSVREISTKSA 259
Query: 140 KLITVSPDTKVLRAMQLM 157
LIT SP V M M
Sbjct: 260 NLITASPSETVSDCMAKM 277
>gi|429211285|ref|ZP_19202451.1| putative CBS domain protein [Pseudomonas sp. M1]
gi|428158699|gb|EKX05246.1| putative CBS domain protein [Pseudomonas sp. M1]
Length = 145
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+ V DA++ M NVGAL VV G+ V G+++ERDY RK+I+QGRSS T V IM+
Sbjct: 23 EMVLDALRVMAVKNVGALPVVDNGQ---VVGVVSERDYARKMILQGRSSVGTPVSAIMS- 78
Query: 138 ENKLITVSPDTKVLRAMQLMT 158
+ ++TV V M +MT
Sbjct: 79 -SPVVTVDSQQNVDTCMSIMT 98
>gi|374850834|dbj|BAL53812.1| signal transduction protein [uncultured planctomycete]
Length = 151
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ++L+ KG G L + TV A + M QH++G LVV +++ + GI++ERD
Sbjct: 4 LRELLQLKG----GQVLTISPSQTVLAAAELMNQHHIGCLVVC---DERGICGILSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
L++++ R ST VG++MT ++I +PD + +A ++M
Sbjct: 57 LQRVVAARRDPSSTTVGEVMT--TQVIFAAPDMPIDQAQRIM 96
>gi|374857450|dbj|BAL60302.1| inosine monophosphate dehydrogenase [uncultured crenarchaeote]
Length = 159
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
V+ A M + G+LVVV G+ GI+TERD +R+++ +GRS +TKVGDIM+
Sbjct: 31 NVFYAANVMRERARGSLVVVDDGKP---VGIVTERDIVRRVVAEGRSPSATKVGDIMS-- 85
Query: 139 NKLITVSPDTKVLRAMQLM 157
LI+V P+ V A+++M
Sbjct: 86 TPLISVGPEATVAAAVRIM 104
>gi|196250717|ref|ZP_03149405.1| CBS domain containing protein [Geobacillus sp. G11MC16]
gi|196209796|gb|EDY04567.1| CBS domain containing protein [Geobacillus sp. G11MC16]
Length = 148
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV +A + M+Q N+GAL VV+ G+ V G+IT+RD ++ QG+ + KV D+MT
Sbjct: 23 NQTVQEAAQIMSQKNIGALPVVESGQ---VKGMITDRDITLRVTSQGKDPAAVKVSDVMT 79
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML--LP 164
N+++T +P+ V A +M H + LP
Sbjct: 80 --NQVVTGTPNMSVQDAANVMAQHQVRRLP 107
>gi|138894186|ref|YP_001124639.1| inosine-5'-monophosphate dehydrogenase [Geobacillus
thermodenitrificans NG80-2]
gi|134265699|gb|ABO65894.1| Inosine-5-monophosphate dehydrogenase related protein [Geobacillus
thermodenitrificans NG80-2]
Length = 136
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV +A + M+Q N+GAL VV+ G+ V G+IT+RD ++ QG+ + KV D+MT
Sbjct: 11 NQTVQEAAQIMSQKNIGALPVVESGQ---VKGMITDRDITLRVTSQGKDPAAVKVSDVMT 67
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML 162
N+++T +P+ V A +M H +
Sbjct: 68 --NQVVTGTPNMSVQDAANVMAQHQV 91
>gi|114704331|ref|ZP_01437239.1| putative inosine-5`-monophosphate dehydrogenase protein
[Fulvimarina pelagi HTCC2506]
gi|114539116|gb|EAU42236.1| putative inosine-5`-monophosphate dehydrogenase protein
[Fulvimarina pelagi HTCC2506]
Length = 176
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 57/86 (66%), Gaps = 4/86 (4%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+ D +V +AV M++ ++G++VVV P E+ V G++TERD +++++ QG+ K+T++ DI
Sbjct: 19 SADTSVAEAVAEMSKRDIGSVVVVGPDEK--VEGLVTERDVMKRLVNQGKDPKTTQLADI 76
Query: 135 MTEENKLITVSPDTKVLRAMQLMTGH 160
MT E ++ D +L +++M+
Sbjct: 77 MTRELRM--ARADDDLLDWLRIMSNE 100
>gi|375144377|ref|YP_005006818.1| putative signal transduction protein with CBS domains [Niastella
koreensis GR20-10]
gi|361058423|gb|AEV97414.1| putative signal transduction protein with CBS domains [Niastella
koreensis GR20-10]
Length = 145
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 60/103 (58%), Gaps = 9/103 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
++D+L KG + T TV +A+ M N+G+++V++ G GI+TERDY
Sbjct: 5 VADVLLRKG----SNITTVTPATTVLEALHIMADQNIGSVMVLEDGHY---LGIVTERDY 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
RK++++G+SS TKV +IM+ N L V+ V MQLM+
Sbjct: 58 SRKVVLKGKSSTDTKVSEIMS--NDLPRVTAHDSVDYCMQLMS 98
>gi|425898813|ref|ZP_18875404.1| CBS domain protein [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|397891898|gb|EJL08376.1| CBS domain protein [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
Length = 146
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+++++LK K K + V +A+ M + NVGAL V++ GE V G+I+ERD
Sbjct: 3 SVAEVLKLKAK-HNQQVHTIAPHQMVLEALMLMAEKNVGALPVMQNGE---VVGVISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK+++ GRSS T V IM+ + +ITV V M +MT
Sbjct: 59 YARKLVLHGRSSVGTPVSAIMS--SPVITVDSHQSVETCMGIMT 100
>gi|398989485|ref|ZP_10692726.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM24]
gi|399015857|ref|ZP_10718114.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM16]
gi|398107339|gb|EJL97341.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM16]
gi|398147643|gb|EJM36346.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM24]
Length = 146
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E + V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---EDEKVVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMT 136
Y RK+++ GRSS T V DIM
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV 80
>gi|68445529|dbj|BAE03238.1| inosine monophosphate dehydrogenase [unclutured Candidatus
Nitrosocaldus sp.]
Length = 191
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
V+ A M + G+LVVV G+ GI+TERD +R+++ +GRS +TKVGDIM+
Sbjct: 63 NVFYAANVMRERARGSLVVVDDGKP---VGIVTERDIVRRVVAEGRSPSATKVGDIMS-- 117
Query: 139 NKLITVSPDTKVLRAMQLM 157
LI+V P+ V A+++M
Sbjct: 118 TPLISVGPEATVAAAVRIM 136
>gi|398922044|ref|ZP_10660088.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM49]
gi|398929099|ref|ZP_10663757.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM48]
gi|398163542|gb|EJM51697.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM49]
gi|398167513|gb|EJM55573.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM48]
Length = 146
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---ENDEVLGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
Y RK+++ GRSS T V DIM + +ITV V + +M+ L
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--SPVITVDTHQTVETCLGIMSDRRL 104
>gi|389680723|ref|ZP_10172072.1| CBS domain protein [Pseudomonas chlororaphis O6]
gi|399009930|ref|ZP_10712327.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM17]
gi|388555310|gb|EIM18554.1| CBS domain protein [Pseudomonas chlororaphis O6]
gi|398109029|gb|EJL98973.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM17]
Length = 146
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+++++LK K K + V +A+ M + NVGAL V++ GE V G+I+ERD
Sbjct: 3 SVAEVLKLKAK-HNQQVHTIAPHQMVLEALMLMAEKNVGALPVMQNGE---VVGVISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK+++ GRSS T V IM+ + +ITV V M +MT
Sbjct: 59 YARKLVLHGRSSVGTPVSAIMS--SPVITVDSHQSVETCMGIMT 100
>gi|418519453|ref|ZP_13085505.1| hypothetical protein WS7_00250 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410704897|gb|EKQ63376.1| hypothetical protein WS7_00250 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
Length = 145
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
M + +GA++V+ E + GI++ERDY RK++++ RSS +T V IM+ E ++TVSP
Sbjct: 34 MAEKAIGAVLVM---EGPRLVGIVSERDYARKVVLRDRSSSTTSVAQIMSAE--VVTVSP 88
Query: 147 DTKVLRAMQLMT 158
V R MQLMT
Sbjct: 89 SETVERCMQLMT 100
>gi|381169714|ref|ZP_09878877.1| CBS domain [Xanthomonas citri pv. mangiferaeindicae LMG 941]
gi|390990846|ref|ZP_10261124.1| CBS domain [Xanthomonas axonopodis pv. punicae str. LMG 859]
gi|418518832|ref|ZP_13084964.1| hypothetical protein MOU_18761 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|372554389|emb|CCF68099.1| CBS domain [Xanthomonas axonopodis pv. punicae str. LMG 859]
gi|380689732|emb|CCG35364.1| CBS domain [Xanthomonas citri pv. mangiferaeindicae LMG 941]
gi|410702120|gb|EKQ60630.1| hypothetical protein MOU_18761 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 142
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
M + +GA++V+ E + GI++ERDY RK++++ RSS +T V IM+ E ++TVSP
Sbjct: 31 MAEKAIGAVLVM---EGPRLVGIVSERDYARKVVLRDRSSSTTSVAQIMSAE--VVTVSP 85
Query: 147 DTKVLRAMQLMT 158
V R MQLMT
Sbjct: 86 SETVERCMQLMT 97
>gi|347822266|ref|ZP_08875700.1| signal-transduction protein [Verminephrobacter aporrectodeae subsp.
tuberculatae At4]
Length = 147
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 5/80 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+V+DA++ M + +GAL+V E ++ GI+TERDY RKI++ GR+S +T V D MT
Sbjct: 24 SVFDALERMAEKGIGALLVT---EGDAIVGILTERDYSRKIVLMGRTSAATLVRDAMTTP 80
Query: 139 NKLITVSPDTKVLRAMQLMT 158
+ S ++ + MQLMT
Sbjct: 81 VMFVRSSQTSE--QCMQLMT 98
>gi|222875041|gb|EEF12172.1| predicted protein [Populus trichocarpa]
Length = 151
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++DILK+K GA S D+V DA++ M +GAL+V+ E +AGI+TER
Sbjct: 81 TAVADILKSKASGAVYS---IAPTDSVLDALRLMADKGIGALLVM---EGSEIAGIVTER 134
Query: 114 DYLRKIIVQGRSSKST 129
DY RKI + GR+S +T
Sbjct: 135 DYARKIALLGRTSGAT 150
>gi|239826078|ref|YP_002948702.1| hypothetical protein GWCH70_0527 [Geobacillus sp. WCH70]
gi|239806371|gb|ACS23436.1| CBS domain containing protein [Geobacillus sp. WCH70]
Length = 147
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV +A + M+Q N+GAL VV+ G+ V G+IT+RD + QG+ ST V +IMT
Sbjct: 22 NQTVQEAAQIMSQKNIGALPVVENGQ---VKGMITDRDITLRTSAQGKDPASTPVSEIMT 78
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML 162
N+++T +P+ V A +M H +
Sbjct: 79 --NRVVTGTPNMSVQEAASVMAQHQI 102
>gi|213964753|ref|ZP_03392953.1| cyclic nucleotide-binding protein [Corynebacterium amycolatum SK46]
gi|213952946|gb|EEB64328.1| cyclic nucleotide-binding protein [Corynebacterium amycolatum SK46]
Length = 624
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 35 SSRFESVSSARMEEHGFES--TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNV 92
++R +V+S ES T ++D+++ S + C+ D TV +A + MT+ NV
Sbjct: 130 NARIRAVASKLRSTAASESLRTRVADLMET-------SLVTCSADATVQEAAQIMTERNV 182
Query: 93 GALVVVKPG--EQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKV 150
+L+V++ Q + GIIT+RD R+++ + + ++S V ++MT + T+SPD V
Sbjct: 183 SSLLVMESAGANQSPLVGIITDRDLRRRVLAEAKPAESL-VSEVMTGNPE--TISPDLLV 239
Query: 151 LRAMQLMT--GHMLLP 164
AM LM G+ LP
Sbjct: 240 FEAMLLMAERGYHHLP 255
>gi|289664279|ref|ZP_06485860.1| hypothetical protein XcampvN_14738 [Xanthomonas campestris pv.
vasculorum NCPPB 702]
gi|289667405|ref|ZP_06488480.1| hypothetical protein XcampmN_02517 [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 198
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%), Gaps = 5/77 (6%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKL 141
+A++ M + +GA++V+ + + GI++ERDY RK++++ R+S +T V IM+ E +
Sbjct: 3 EAIRLMAEKAIGAVLVM---DGPRLLGIVSERDYARKVVLRDRASSTTSVAGIMSAE--V 57
Query: 142 ITVSPDTKVLRAMQLMT 158
+TVSP V R MQLM+
Sbjct: 58 VTVSPSDTVERCMQLMS 74
>gi|398880462|ref|ZP_10635507.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM67]
gi|398886794|ref|ZP_10641650.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM60]
gi|398994575|ref|ZP_10697474.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM21]
gi|407363979|ref|ZP_11110511.1| signal transduction protein [Pseudomonas mandelii JR-1]
gi|398131896|gb|EJM21192.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM21]
gi|398188021|gb|EJM75340.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM60]
gi|398192664|gb|EJM79804.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM67]
Length = 146
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---ENDEVLGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMT 136
Y RK+++ GRSS T V DIM
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV 80
>gi|9188545|dbj|BAA99562.1| inosine-5'-monophosphate dehydrogenase [Chlorella vulgaris]
Length = 182
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 40/54 (74%)
Query: 105 SVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+V GI+TERDYL K++V+ +SSK V IMT+++KL+T +P V+ M+LMT
Sbjct: 6 AVVGIVTERDYLTKVVVKDQSSKDLAVSQIMTDKSKLMTATPQQSVVDVMKLMT 59
>gi|78048738|ref|YP_364913.1| hypothetical protein XCV3182 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78037168|emb|CAJ24913.1| conserved hypothetical protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 142
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
M + +GA++V+ E + GI++ERDY RK++++ R+S +T V +IM+ E ++TVSP
Sbjct: 31 MAEKAIGAVLVM---EGTRLVGIVSERDYARKVVLRDRASSTTSVAEIMSAE--VVTVSP 85
Query: 147 DTKVLRAMQLMT 158
V R MQLMT
Sbjct: 86 SDTVERCMQLMT 97
>gi|398955427|ref|ZP_10676421.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM33]
gi|398151033|gb|EJM39596.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM33]
Length = 146
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---ENDEVLGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
Y RK+++ GRSS T V DIM + +ITV V + +M+ L
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--SPVITVDTHQTVDTCLGIMSDRRL 104
>gi|430760638|ref|YP_007216495.1| CBS domain containing membrane protein [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430010262|gb|AGA33014.1| CBS domain containing membrane protein [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 142
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+V++A++ M H +GAL V++ G + G+I+ERDY RK+I+ RSS++T V +IM
Sbjct: 23 SVFEALRMMADHEIGALPVLENG---RLVGLISERDYARKVILLDRSSRNTPVREIMM-- 77
Query: 139 NKLITVSPDTKVLRAMQLMT 158
++ V P V M LMT
Sbjct: 78 ARVTCVEPGRTVEECMALMT 97
>gi|426408540|ref|YP_007028639.1| signal transduction protein [Pseudomonas sp. UW4]
gi|426266757|gb|AFY18834.1| signal transduction protein [Pseudomonas sp. UW4]
Length = 146
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---ENDEVLGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMT 136
Y RK+++ GRSS T V DIM
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV 80
>gi|398872952|ref|ZP_10628224.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM74]
gi|398201096|gb|EJM87986.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM74]
Length = 146
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---ENDEVLGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMT 136
Y RK+++ GRSS T V DIM
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV 80
>gi|224000868|ref|XP_002290106.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973528|gb|EED91858.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 194
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV++AV + ++VG LV +++G+I+ERDY++KI + G+SSK T V I T
Sbjct: 62 ESTVFEAVNKLAAYDVGCLVT--KDANGNLSGVISERDYVQKIALLGKSSKDTLVRQIST 119
Query: 137 EENKLITVSPDTKVLRAMQLM 157
+ L+T SP V MQ M
Sbjct: 120 KAADLVTASPSDTVDACMQKM 140
>gi|395006914|ref|ZP_10390707.1| CBS domain-containing protein [Acidovorax sp. CF316]
gi|394315102|gb|EJE51929.1| CBS domain-containing protein [Acidovorax sp. CF316]
Length = 145
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ IL++K D + D+V A++ M +GALVV E ++ GI TER
Sbjct: 2 TVVAKILQSK---PDATVHTIRPTDSVLSALQLMADKGIGALVVT---EGDAIVGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
DY RKI + GR+S +T D+MT + V PD + MQ+M+
Sbjct: 56 DYARKIALLGRTSAATLARDVMTTAVRF--VRPDQSSEQCMQIMS 98
>gi|373458680|ref|ZP_09550447.1| putative signal transduction protein with CBS domains [Caldithrix
abyssi DSM 13497]
gi|371720344|gb|EHO42115.1| putative signal transduction protein with CBS domains [Caldithrix
abyssi DSM 13497]
Length = 144
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
TV +A++ M NVGAL+VVK G+ V GII+ERD RK+ ++GR +K T V DIMT
Sbjct: 23 TVLEALQKMADKNVGALLVVKDGQ---VKGIISERDCARKLDIKGRCAKDTPVKDIMT 77
>gi|77459957|ref|YP_349464.1| signal transduction protein [Pseudomonas fluorescens Pf0-1]
gi|77383960|gb|ABA75473.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 146
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+ M + NVGAL+VV E +V GII+ERDY RK+++ GRSS T V DIM
Sbjct: 24 DHMVLEALMKMAEKNVGALLVV---EDDNVVGIISERDYARKLVLHGRSSVGTPVRDIMV 80
>gi|398938330|ref|ZP_10667733.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM41(2012)]
gi|398165878|gb|EJM53988.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM41(2012)]
Length = 146
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + V +A+ M NVGAL V++ GE V GII+ERD
Sbjct: 3 TVAQLLKLKAE-QNHEVHTIAPHQMVLEALMVMAAKNVGALPVLRNGE---VVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK++++GRSS T V DIM + +ITV V M +M+
Sbjct: 59 YARKLVLKGRSSVGTPVEDIMV--SPVITVDTHQTVETCMGIMS 100
>gi|348676171|gb|EGZ15989.1| hypothetical protein PHYSODRAFT_286413 [Phytophthora sojae]
Length = 184
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV++A+ M N+G L V GE G++TERDYL+K+ +QG ++K+T VG IMT
Sbjct: 53 TVFEAITRMAGINLGCLAV--SGEGGKFVGVVTERDYLKKVELQGLTAKNTLVGQIMTHR 110
Query: 139 NKLI 142
+LI
Sbjct: 111 ARLI 114
>gi|332662181|ref|YP_004444969.1| signal transduction protein with CBS domains [Haliscomenobacter
hydrossis DSM 1100]
gi|332330995|gb|AEE48096.1| putative signal transduction protein with CBS domains
[Haliscomenobacter hydrossis DSM 1100]
Length = 144
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA+ M+Q +GA++V+ ++ + GI +ERDY RK I+ GR +KST V ++MT
Sbjct: 22 DHMVIDALALMSQQGIGAVLVM---DEDQLIGIFSERDYARKGIIVGRKAKSTPVTEVMT 78
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+ TVSPD + M L +
Sbjct: 79 A--NVFTVSPDMDIEDCMTLFS 98
>gi|443473996|ref|ZP_21064017.1| CBS domain containing protein [Pseudomonas pseudoalcaligenes KF707]
gi|442904931|gb|ELS29846.1| CBS domain containing protein [Pseudomonas pseudoalcaligenes KF707]
Length = 146
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 9/108 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L+AK + D + DA++ + + N+GAL V + G + GI++ERD
Sbjct: 3 TVAQMLRAKPRQ---QVHTIEADVPMLDALRLLAEQNIGALPVTEGGR---LVGIVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTG-HM 161
Y R+ ++QGRSS +T V + MTE + TV+ + M LMT HM
Sbjct: 57 YARRGVLQGRSSVATPVREFMTE--PVFTVNAGQSIRECMSLMTDRHM 102
>gi|399002176|ref|ZP_10704867.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM18]
gi|398125432|gb|EJM14911.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM18]
Length = 146
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + + V +A+ M NVGAL V+K G+ V GII+ERD
Sbjct: 3 TVAQLLKLKAQ-QNQAVHTIAPHQMVLEALMVMAAKNVGALPVLKDGK---VVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK++++GRSS T V DIM + +ITV V M +M+
Sbjct: 59 YARKLVLKGRSSVGTPVSDIMV--SPVITVDTHQTVETCMGIMS 100
>gi|261418831|ref|YP_003252513.1| hypothetical protein GYMC61_1387 [Geobacillus sp. Y412MC61]
gi|319765647|ref|YP_004131148.1| hypothetical protein [Geobacillus sp. Y412MC52]
gi|261375288|gb|ACX78031.1| CBS domain containing protein [Geobacillus sp. Y412MC61]
gi|317110513|gb|ADU93005.1| CBS domain containing protein [Geobacillus sp. Y412MC52]
Length = 148
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV +A + M+Q N+GAL VV+ G+ V G+IT+RD ++ QG+ + KV ++MT
Sbjct: 23 NQTVQEAAQIMSQKNIGALPVVENGQ---VKGMITDRDITLRVSSQGKDPSTVKVAEVMT 79
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML--LP 164
N+++T +P+ V A +M H + LP
Sbjct: 80 --NQVVTGTPNMNVQEAANVMAQHQVRRLP 107
>gi|398853662|ref|ZP_10610258.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM80]
gi|398238902|gb|EJN24622.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM80]
Length = 146
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---EDDKVVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMT 136
Y RK+++ GRSS T V DIM
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV 80
>gi|21243772|ref|NP_643354.1| hypothetical protein XAC3045 [Xanthomonas axonopodis pv. citri str.
306]
gi|21109361|gb|AAM37890.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 142
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
M + +GA++V+ E + GI++ERDY RK++++ RSS +T V IM+ E ++TVSP
Sbjct: 31 MAEKAIGAVLVM---EGPRLVGIVSERDYARKVVLRDRSSSTTSVAQIMSGE--VVTVSP 85
Query: 147 DTKVLRAMQLMT 158
V R MQLMT
Sbjct: 86 SETVERCMQLMT 97
>gi|389706323|ref|ZP_10186413.1| hypothetical protein HADU_05430 [Acinetobacter sp. HA]
gi|388610800|gb|EIM39915.1| hypothetical protein HADU_05430 [Acinetobacter sp. HA]
Length = 143
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV +A+ M ++GA+VVV E+ V GI++ERDY RKI++ R+S T V IMT
Sbjct: 24 TVLEAITLMADKDIGAIVVV---EEDKVVGILSERDYTRKIVLMERTSFDTTVSQIMT-- 78
Query: 139 NKLITVSPDTKVLRAMQLMTGHML 162
+ +ITV T V + LMT L
Sbjct: 79 SNVITVDCHTSVPDCLSLMTNKHL 102
>gi|358638453|dbj|BAL25750.1| hypothetical protein AZKH_3461 [Azoarcus sp. KH32C]
Length = 151
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
+ T+ IL+ KG A + V DA+ M + ++G+++V+ E + + GI TE
Sbjct: 6 TVTVRQILEQKGTAAHAVAPTVS----VLDALTLMAKQDIGSVLVI---ENERLVGIFTE 58
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
RDY RK+ ++G +S+ VGD+MT + TV+P + M +MT
Sbjct: 59 RDYARKLALKGLTSRDATVGDLMTP--NVCTVTPTHTIEAVMNIMT 102
>gi|297531207|ref|YP_003672482.1| hypothetical protein GC56T3_2965 [Geobacillus sp. C56-T3]
gi|448236783|ref|YP_007400841.1| forespore-specific sporulation protein [Geobacillus sp. GHH01]
gi|297254459|gb|ADI27905.1| CBS domain containing protein [Geobacillus sp. C56-T3]
gi|445205625|gb|AGE21090.1| forespore-specific sporulation protein [Geobacillus sp. GHH01]
Length = 148
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV +A + M+Q N+GAL VV+ G+ V G+IT+RD ++ QG+ + KV ++MT
Sbjct: 23 NQTVQEAAQIMSQKNIGALPVVENGQ---VKGMITDRDITLRVSSQGKDPSTVKVAEVMT 79
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML--LP 164
N+++T +P+ V A +M H + LP
Sbjct: 80 --NQVVTGTPNMSVQEAANVMAQHQVRRLP 107
>gi|398980397|ref|ZP_10688956.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM25]
gi|398134600|gb|EJM23747.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM25]
Length = 146
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---EDDKVVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMT 136
Y RK+++ GRSS T V DIM
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV 80
>gi|398903957|ref|ZP_10651979.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM50]
gi|398176386|gb|EJM64105.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM50]
Length = 146
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + V +A+ M NVGAL V+K G+ V GII+ERD
Sbjct: 3 TVAQLLKLKAQ-QNQQVHSIAPHQMVLEALMVMAAKNVGALPVLKDGK---VVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK++++GRSS T V DIM + +ITV V M +M+
Sbjct: 59 YARKLVLKGRSSVGTPVSDIMV--SPVITVDTHQTVETCMGIMS 100
>gi|56419104|ref|YP_146422.1| inosine-5'-monophosphate dehydrogenase [Geobacillus kaustophilus
HTA426]
gi|375007417|ref|YP_004981050.1| CBS domain-containing protein yhcV [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|56378946|dbj|BAD74854.1| inosine-5-monophosphate dehydrogenase [Geobacillus kaustophilus
HTA426]
gi|359286266|gb|AEV17950.1| CBS domain-containing protein yhcV [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 148
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV +A + M+Q N+GAL VV+ G+ V G+IT+RD ++ QG+ + KV ++MT
Sbjct: 23 NQTVQEAAQIMSQKNIGALPVVENGQ---VKGMITDRDITLRVSSQGKDPSTVKVAEVMT 79
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML--LP 164
N+++T +P+ V A +M H + LP
Sbjct: 80 --NQVVTGTPNMSVQEAANVMAQHQVRRLP 107
>gi|398840754|ref|ZP_10597986.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM102]
gi|398109766|gb|EJL99682.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM102]
Length = 146
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + V +A+ M NVGAL V+K G+ V GII+ERD
Sbjct: 3 TVAQLLKLKAQ-QNQEVHTIAPHQMVLEALMVMAAKNVGALPVLKEGK---VVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK++++GRSS T V DIM +ITV V M +M+
Sbjct: 59 YARKLVLKGRSSVGTPVSDIMV--APVITVDTHQTVETCMGIMS 100
>gi|398866658|ref|ZP_10622139.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM78]
gi|398239725|gb|EJN25429.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM78]
Length = 146
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +AV+ M + NVGAL V++ G+ V G+I+ERDY RK+++ GRSS T V IM+
Sbjct: 24 DAMVLEAVQKMAEKNVGALPVIEKGQ---VVGVISERDYARKVVLLGRSSVGTPVRAIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+ ++T + M +MT
Sbjct: 81 --SPVVTADSQQSIEHCMAVMT 100
>gi|308808997|ref|XP_003081808.1| unnamed protein product [Ostreococcus tauri]
gi|116060275|emb|CAL55611.1| unnamed protein product [Ostreococcus tauri]
Length = 258
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 51 FESTTISDILKA-KGKG-ADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVK--------- 99
+ + +SDIL A GK A G W + V +AV+ M ++GALVV+
Sbjct: 65 YNCSRVSDILNATSGKHRAFGKSHWIDGEARVSEAVRQMHATDLGALVVMDRIALDADAT 124
Query: 100 ----------PGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT-------EENKLI 142
E ++ GI TERDYL + +G S TKV +IMT + ++L+
Sbjct: 125 GVISDEELALSAENDAIIGIFTERDYL-NAVAKGVISPKTKVSEIMTGFRDASTQVSRLV 183
Query: 143 TVSPDTKVLRAMQLMTGHML 162
VSP L AM+ MT H L
Sbjct: 184 CVSPQDTALAAMESMTTHRL 203
>gi|262375222|ref|ZP_06068455.1| CBS domain-containing protein [Acinetobacter lwoffii SH145]
gi|262309476|gb|EEY90606.1| CBS domain-containing protein [Acinetobacter lwoffii SH145]
gi|407007547|gb|EKE23170.1| CBS protein [uncultured bacterium]
Length = 143
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D TV +A+ M +GALVV + +V GI++ERDY RKI + R+S T V +IMT
Sbjct: 22 DSTVLEAITLMADKGIGALVVT---HEDNVVGILSERDYTRKIALMQRTSFDTTVNEIMT 78
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+K+ITV+ T V + LMT
Sbjct: 79 --SKVITVNTATSVEDCLSLMT 98
>gi|443471464|ref|ZP_21061531.1| Inosine-5'-monophosphate dehydrogenase [Pseudomonas
pseudoalcaligenes KF707]
gi|442901494|gb|ELS27360.1| Inosine-5'-monophosphate dehydrogenase [Pseudomonas
pseudoalcaligenes KF707]
Length = 144
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+++IL+AK + TV +A M ++GALVV++ GE + GI+TERD
Sbjct: 3 TVAEILRAK---SHTQLFSVEPTTTVLEAALMMADKDIGALVVMQGGE---LVGIVTERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
++R++ RS+ T + +IMT + L V+P MQLMT
Sbjct: 57 FVRRVAALERSAYGTTIEEIMT--SNLFVVTPRDSNQYCMQLMT 98
>gi|398858831|ref|ZP_10614516.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM79]
gi|398238236|gb|EJN23969.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM79]
Length = 146
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + V +A+ M NVGAL V+K G+ V GII+ERD
Sbjct: 3 TVAQLLKLKAQ-QNQQVHSIAPHQMVLEALMVMAAKNVGALPVLKEGK---VVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK++++GRSS T V DIM +ITV V M +M+
Sbjct: 59 YARKLVLKGRSSVGTPVSDIMV--APVITVDTHQTVETCMGIMS 100
>gi|126641980|ref|YP_001084964.1| hypothetical protein A1S_1935 [Acinetobacter baumannii ATCC 17978]
Length = 112
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 7/80 (8%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
M + +GALVV + GEQ V GI++ERDY RK+ + RSS ST V +IMT K+ITV
Sbjct: 1 MAEKGIGALVVAE-GEQ--VVGILSERDYTRKVTLMERSSYSTTVAEIMT--AKVITVGL 55
Query: 147 DTKVLRAMQLMTGHML--LP 164
+ V +QLMT L LP
Sbjct: 56 NNTVEECLQLMTDRHLRHLP 75
>gi|330809809|ref|YP_004354271.1| hypothetical protein PSEBR_a2964 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|378950736|ref|YP_005208224.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas fluorescens
F113]
gi|423697458|ref|ZP_17671948.1| CBS domain protein [Pseudomonas fluorescens Q8r1-96]
gi|327377917|gb|AEA69267.1| Conserved hypothetical protein, CBS domain-containing protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|359760750|gb|AEV62829.1| Inosine-5'-monophosphate dehydrogenase [Pseudomonas fluorescens
F113]
gi|388003991|gb|EIK65318.1| CBS domain protein [Pseudomonas fluorescens Q8r1-96]
Length = 146
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV +A++ M + NVGAL V++ G+ V G+ +ERDY RK++++GRSS T V IM+
Sbjct: 24 EQTVLEALQIMAEKNVGALPVIEDGQ---VVGVFSERDYARKMVLKGRSSVGTTVRTIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
++T + R M++MT
Sbjct: 81 A--PVVTADSQQSIDRCMEVMT 100
>gi|257075658|ref|ZP_05570019.1| CBS domain-containing protein [Ferroplasma acidarmanus fer1]
Length = 133
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T+YD K MT+ N G+L++ G +S+ GI+TERD ++ I G S + VGD+ T+E
Sbjct: 13 TIYDGAKKMTEENKGSLLL---GSAESMKGIVTERDIIKAI--AGGKSLTAPVGDVATKE 67
Query: 139 NKLITVSPDTKVLRAMQLMTGH 160
N LI V D + +A LM+ H
Sbjct: 68 N-LIFVHEDDSITKAAVLMSKH 88
>gi|325925784|ref|ZP_08187157.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas perforans 91-118]
gi|325543841|gb|EGD15251.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas perforans 91-118]
Length = 135
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
M + +GA++V+ E + GI++ERDY RK++++ R+S +T V +IM+ E ++TV+P
Sbjct: 24 MAEKAIGAVLVM---EGTRLVGIVSERDYARKVVLRDRASSTTSVAEIMSAE--VVTVTP 78
Query: 147 DTKVLRAMQLMT 158
V R MQLMT
Sbjct: 79 SDTVERCMQLMT 90
>gi|346725849|ref|YP_004852518.1| hypothetical protein XACM_2967 [Xanthomonas axonopodis pv.
citrumelo F1]
gi|346650596|gb|AEO43220.1| CBS domain protein [Xanthomonas axonopodis pv. citrumelo F1]
Length = 142
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
M + +GA++V+ E + GI++ERDY RK++++ R+S +T V +IM+ E ++TV+P
Sbjct: 31 MAEKAIGAVLVM---EGTRLVGIVSERDYARKVVLRDRASSTTSVAEIMSAE--VVTVTP 85
Query: 147 DTKVLRAMQLMT 158
V R MQLMT
Sbjct: 86 SDTVERCMQLMT 97
>gi|16081707|ref|NP_394084.1| inosine-5'-monophosphate dehydrogenase [Thermoplasma acidophilum
DSM 1728]
gi|10639778|emb|CAC11750.1| inosine-5'-monophosphate dehydrogenase related protein
[Thermoplasma acidophilum]
Length = 145
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 12/102 (11%)
Query: 57 SDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYL 116
SDI++ K G D + Y+A K M Q +VG ++ + GE + G++TE DY+
Sbjct: 11 SDIMRKYDKIMPG-------DTSAYEAAKIMAQDHVGFAIIAENGE---IKGMVTEWDYI 60
Query: 117 RKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
KII Q R K ++ +IM + +I++ PDT + ++M
Sbjct: 61 NKIIAQDRDPKKVRIDEIMN--SPIISIDPDTPTFKVTEIMA 100
>gi|398895284|ref|ZP_10647130.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM55]
gi|398181076|gb|EJM68648.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM55]
Length = 146
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVVDNDE---VLGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMT 136
Y RK+++ GRSS T V DIM
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV 80
>gi|398967935|ref|ZP_10682143.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM30]
gi|398144279|gb|EJM33124.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM30]
Length = 146
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVVDNDE---VLGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMT 136
Y RK+++ GRSS T V DIM
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV 80
>gi|398862863|ref|ZP_10618448.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM78]
gi|398249805|gb|EJN35181.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM78]
Length = 146
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+ M + NVGAL+VV E V GII+ERDY RK+++ GRSS T V DIM
Sbjct: 24 DHMVLEALMKMAEKNVGALLVVDNDE---VVGIISERDYARKLVLHGRSSVGTPVRDIMV 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+ +ITV V + +M+
Sbjct: 81 --SNVITVDTHQTVDTCLGIMS 100
>gi|94971756|ref|YP_593804.1| hypothetical protein Acid345_4731 [Candidatus Koribacter versatilis
Ellin345]
gi|94553806|gb|ABF43730.1| CBS domain containing membrane protein [Candidatus Koribacter
versatilis Ellin345]
Length = 145
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 65 KGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124
K D S + + + +V DA+ M + GA+ VV+ E VAG+ +ERD +RK + GR
Sbjct: 5 KLCDQSPAFVSINASVADAITMMIDRHAGAVAVVE--ENHVVAGMFSERDVMRKFALSGR 62
Query: 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM--TGHMLLP 164
S++ST V + M++ ++ SP+T A+Q+M + H LP
Sbjct: 63 SAESTPVREYMSQ--YVVMGSPETTPAEALQVMIESRHRHLP 102
>gi|225016723|ref|ZP_03705915.1| hypothetical protein CLOSTMETH_00633 [Clostridium methylpentosum
DSM 5476]
gi|224950527|gb|EEG31736.1| hypothetical protein CLOSTMETH_00633 [Clostridium methylpentosum
DSM 5476]
Length = 137
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
DTV +A + M +H++G L V+K G + + G++T+RD + + + R ++ KVG+IMT
Sbjct: 18 DTVSNAAEIMCRHDIGVLPVMKNGNK--LVGMLTDRDIVLRCVADKRDQENCKVGEIMT- 74
Query: 138 ENKLITVSPDTKVLRAMQLMTGH 160
+ +++ P+ + A+Q+M+ H
Sbjct: 75 -STTLSIDPNKSLAEALQMMSNH 96
>gi|330505348|ref|YP_004382217.1| signal-transduction protein [Pseudomonas mendocina NK-01]
gi|328919634|gb|AEB60465.1| signal-transduction protein [Pseudomonas mendocina NK-01]
Length = 145
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 62/104 (59%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+++++++K A S ++D++ D ++ + + +GALVV+ G + GI++ERD
Sbjct: 3 TVAEVIRSK---AHTSVYSVDSEDSLRDGLRILAEKGIGALVVLSGGR---LVGIVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y+RK+ + S K+ +IMT E +I+V P + M+LMT
Sbjct: 57 YVRKVALADPSMLDAKISEIMTRE--VISVGPRDNLQYCMELMT 98
>gi|224000862|ref|XP_002290103.1| hypothetical protein THAPSDRAFT_268840 [Thalassiosira pseudonana
CCMP1335]
gi|220973525|gb|EED91855.1| hypothetical protein THAPSDRAFT_268840 [Thalassiosira pseudonana
CCMP1335]
Length = 192
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVV-KPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
D VY+AV+ +N+G LV K G+ ++G+++ERDY+ K+ + G++SK + +I
Sbjct: 59 DLPVYEAVQKFAAYNIGCLVTTDKDGK---ISGVVSERDYVCKVALLGKTSKDVSIKEIS 115
Query: 136 TEENKLITVSPDTKVLRAMQLM 157
T+ LIT SP+ V M M
Sbjct: 116 TKSANLITASPNETVSNCMAKM 137
>gi|254440558|ref|ZP_05054052.1| hypothetical protein OA307_5428 [Octadecabacter antarcticus 307]
gi|198256004|gb|EDY80318.1| hypothetical protein OA307_5428 [Octadecabacter antarcticus 307]
Length = 145
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S ILK+K A G L T+D V DA + M++ +GA+V+ G + AGI++ERD
Sbjct: 3 VSQILKSK---ATGGVLTLTSDANVADAARIMSEKRIGAVVISDDG-GATPAGILSERDI 58
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
+R++ QG S + V D+MT+ KL+T SP
Sbjct: 59 VRELGKQGPSCMALVVSDMMTK--KLVTCSP 87
>gi|421505750|ref|ZP_15952685.1| signal-transduction protein [Pseudomonas mendocina DLHK]
gi|400343447|gb|EJO91822.1| signal-transduction protein [Pseudomonas mendocina DLHK]
Length = 146
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 55 TISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T +++L++K ++++ ++D++ D ++ M + VGALVV+ G + GI++ER
Sbjct: 3 TAAEVLRSKPY----AYVYSVDSEDSLVDGLRIMAEKGVGALVVMSGGR---LVGIVSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
DY+RK+ + S TK+ IMT + +I+V P V M+LMT
Sbjct: 56 DYVRKVALADLSVLETKISHIMTRD--VISVGPRDSVQHCMELMT 98
>gi|294627296|ref|ZP_06705882.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292598378|gb|EFF42529.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 119
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 5/77 (6%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKL 141
+A++ M + VGA++V+ + + GI++ERDY K++++ RSS +T V +I + E +
Sbjct: 3 EAIRLMAEKAVGAVLVM---DGPRLVGIVSERDYAHKVVLRDRSSSTTSVAEITSAE--V 57
Query: 142 ITVSPDTKVLRAMQLMT 158
+TVSP V R MQLMT
Sbjct: 58 VTVSPSDTVERCMQLMT 74
>gi|397625460|gb|EJK67804.1| hypothetical protein THAOC_11112 [Thalassiosira oceanica]
Length = 153
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +AV+ + +NVGALV Q +++G+++ERDY+ KI + RSSK KV +I T
Sbjct: 48 DSPVIEAVEKLAAYNVGALVTTDV--QGNLSGVLSERDYVTKIALLERSSKEVKVKEIST 105
Query: 137 EENKLITVSPD 147
+ L+T SP+
Sbjct: 106 KAANLVTASPE 116
>gi|325923778|ref|ZP_08185394.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas gardneri ATCC 19865]
gi|325545750|gb|EGD16988.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas gardneri ATCC 19865]
Length = 142
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
M + +GA++V+ + + GI++ERDY RK++++ R+S +T V +IM+ E ++TVSP
Sbjct: 31 MAEKGIGAVLVM---DGPRLIGIVSERDYARKVVLRDRASSTTSVAEIMSTE--VVTVSP 85
Query: 147 DTKVLRAMQLMT 158
V R MQLMT
Sbjct: 86 SDTVERCMQLMT 97
>gi|70729700|ref|YP_259439.1| hypothetical protein PFL_2332 [Pseudomonas protegens Pf-5]
gi|68343999|gb|AAY91605.1| CBS domain protein [Pseudomonas protegens Pf-5]
Length = 146
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+++++LK K K + V +A+ M + NVGAL V++ G V G+I+ERD
Sbjct: 3 SVAELLKLKAK-HNQQVHTIAPHQMVLEALMVMAEKNVGALPVLENG---VVVGVISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK+++ GRSS T V IM+ + +ITV V M +MT
Sbjct: 59 YARKLVLHGRSSVGTPVSAIMS--SPVITVDSHQSVDTCMNIMT 100
>gi|354614451|ref|ZP_09032314.1| putative signal transduction protein with CBS domains
[Saccharomonospora paurometabolica YIM 90007]
gi|353221195|gb|EHB85570.1| putative signal transduction protein with CBS domains
[Saccharomonospora paurometabolica YIM 90007]
Length = 149
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 8/84 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDA-VKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
I+D+L+ KG S + T DT D V + +HNVGALVVV P + V GI++ERD
Sbjct: 3 IADLLRRKG-----STVATVTPDTGVDGLVARLAEHNVGALVVVGPAGE--VIGIVSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEE 138
+R + +G +T+VGDIMT +
Sbjct: 56 VVRGLRERGTDLLATRVGDIMTTD 79
>gi|298714864|emb|CBJ25763.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 210
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 40 SVSSARMEEHGFESTTISDILKAKGKGADGSWL----WCTTDDTVYDAVKSMTQHNVGAL 95
S+S + +G +TT+ + AK + + + TVY+AV+ +N+GAL
Sbjct: 35 SMSDPKPRNYGEVATTVENRSSAKDALQKSCYFKIDFGISEEATVYEAVQRFAAYNIGAL 94
Query: 96 VVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVS 145
V + K V GI++ERDY+ K+ + G++SKST V +I T L+ S
Sbjct: 95 AVT--NDDKKVIGIVSERDYVSKVALLGKASKSTPVKEIATMGANLVIAS 142
>gi|146309135|ref|YP_001189600.1| signal-transduction protein [Pseudomonas mendocina ymp]
gi|145577336|gb|ABP86868.1| putative signal-transduction protein with CBS domains [Pseudomonas
mendocina ymp]
Length = 146
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 76 TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
++D++ D ++ M + VGALVV+ G + GI++ERDY+RK+ + S TK+ IM
Sbjct: 21 SEDSLVDGLRIMAEKGVGALVVMSGGR---LVGIVSERDYVRKVALADLSVLETKISHIM 77
Query: 136 TEENKLITVSPDTKVLRAMQLMT 158
T + +I+V P V M+LMT
Sbjct: 78 TRD--VISVGPRDSVQHCMELMT 98
>gi|375094239|ref|ZP_09740504.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora marina XMU15]
gi|374654972|gb|EHR49805.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora marina XMU15]
Length = 127
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 11/108 (10%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
ST + DI+ + K + T + V + + M + NVGAL V GE + GI+T+
Sbjct: 4 STKVRDIMTSDPK-------FVDTSEAVSEVARIMARSNVGALPV--RGEDNRLKGIVTD 54
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
RD + K++ +G+ + VG+++ E +L TV PD V A++ M+ H
Sbjct: 55 RDIVVKVLAEGKDPMAVHVGELV--EGELHTVRPDADVEEALEQMSRH 100
>gi|312111796|ref|YP_003990112.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
gi|336236179|ref|YP_004588795.1| hypothetical protein Geoth_2826 [Geobacillus thermoglucosidasius
C56-YS93]
gi|423720712|ref|ZP_17694894.1| CBS domain-containing protein [Geobacillus thermoglucosidans
TNO-09.020]
gi|311216897|gb|ADP75501.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
gi|335363034|gb|AEH48714.1| CBS domain containing protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|383366065|gb|EID43356.1| CBS domain-containing protein [Geobacillus thermoglucosidans
TNO-09.020]
Length = 139
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 12/93 (12%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D VY+A M NVGA+ +V G+ + G+IT+RD ++V+G ++K ST
Sbjct: 14 YCTPVDNVYEAAVKMRDFNVGAIPIVDHGQ---LIGMITDRD----LVVRGIAAKRPGST 66
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
V ++M+ +KLIT++PD V A + M H +
Sbjct: 67 PVTEVMS--DKLITIAPDASVQEAAKKMAEHQI 97
>gi|144899054|emb|CAM75918.1| CBS domain [Magnetospirillum gryphiswaldense MSR-1]
Length = 144
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
S I D++K + S + TV +A + M + +GA+V+V G+ + GI TE
Sbjct: 3 SRLIKDVIKNQ------SIVALPHTATVREAAQEMAKRRIGAIVIVDDGK---LMGIFTE 53
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
RD L +++ +GR ++T + +MT KL T++PD +L A+ +M
Sbjct: 54 RDGLFRVLAEGRDPENTTLDQVMT--GKLSTIAPDRPLLHALHIM 96
>gi|324999636|ref|ZP_08120748.1| signal-transduction protein [Pseudonocardia sp. P1]
Length = 141
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 63/103 (61%), Gaps = 9/103 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+LK KG + + D+ V + ++ +T+ N+GAL VV GE+ + GI++ERD
Sbjct: 3 IADVLKGKGS----AVTTVSPDEAVTEVLRFITEGNLGALPVVD-GER--IVGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R++ QG + + +V +IMT E ++T SPD V ++MT
Sbjct: 56 VRRLHQQGGAMLNARVSEIMTAE--VVTCSPDDGVGDLAKIMT 96
>gi|312112205|ref|YP_003990521.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
gi|336236622|ref|YP_004589238.1| hypothetical protein Geoth_3289 [Geobacillus thermoglucosidasius
C56-YS93]
gi|423721087|ref|ZP_17695269.1| CBS domain containing protein [Geobacillus thermoglucosidans
TNO-09.020]
gi|311217306|gb|ADP75910.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
gi|335363477|gb|AEH49157.1| CBS domain containing protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|383366440|gb|EID43731.1| CBS domain containing protein [Geobacillus thermoglucosidans
TNO-09.020]
Length = 148
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 7/90 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV +A + M+Q N+GAL V + G+ V G+IT+RD + QG+ ST V ++MT
Sbjct: 23 NQTVQEAAQIMSQKNIGALPVAENGQ---VKGMITDRDITLRTSAQGKDPASTPVSEVMT 79
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML--LP 164
N+++T +PD V A +M + + LP
Sbjct: 80 --NRVVTGTPDMSVQEAANVMAQNQVRRLP 107
>gi|116753622|ref|YP_842740.1| signal-transduction protein [Methanosaeta thermophila PT]
gi|116665073|gb|ABK14100.1| putative signal-transduction protein with CBS domains [Methanosaeta
thermophila PT]
Length = 185
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
L D V DA M NVG+L+VV+ + GIITERD ++K++ + + ++V
Sbjct: 16 LTVDADTDVLDAANRMISANVGSLIVVQGAKP---IGIITERDLVKKVVARAEDPRKSRV 72
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLM 157
GD+M + LI + PD + A +LM
Sbjct: 73 GDVMN--SPLIKIHPDASLRDAAELM 96
>gi|317129330|ref|YP_004095612.1| CBS domain containing protein [Bacillus cellulosilyticus DSM 2522]
gi|315474278|gb|ADU30881.1| CBS domain containing protein [Bacillus cellulosilyticus DSM 2522]
Length = 142
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 12/92 (13%)
Query: 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK- 127
G C DD VY+A M Q +VGA+ + E + + G+IT+RD I+V+G + K
Sbjct: 10 GDVEICNPDDNVYEAALKMKQFDVGAIPIC---EGRQLLGMITDRD----IVVRGVAEKR 62
Query: 128 --STKVGDIMTEENKLITVSPDTKVLRAMQLM 157
ST+V D+MTE +L+T PD V A ++M
Sbjct: 63 PNSTQVTDVMTE--QLLTAEPDMTVDDAAKMM 92
>gi|294498144|ref|YP_003561844.1| CBS domain-containing protein [Bacillus megaterium QM B1551]
gi|295703495|ref|YP_003596570.1| hypothetical protein BMD_1359 [Bacillus megaterium DSM 319]
gi|384048025|ref|YP_005496042.1| inosine-5'-monophosphate dehydrogenase protein [Bacillus megaterium
WSH-002]
gi|294348081|gb|ADE68410.1| CBS domain protein [Bacillus megaterium QM B1551]
gi|294801154|gb|ADF38220.1| CBS domain protein [Bacillus megaterium DSM 319]
gi|345445716|gb|AEN90733.1| Inosine-5'-monophosphate dehydrogenase protein [Bacillus megaterium
WSH-002]
Length = 139
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 8/93 (8%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
CTT D VY+ M + NVGA+ +V ++ + G+IT+RD + K I + + + S+KV D
Sbjct: 15 CTTLDNVYEVAVKMKEWNVGAIPIV---DRDQLVGMITDRDLVIKGIAEKKPN-SSKVTD 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
+M+EE LIT++ + V A +LM H + LP
Sbjct: 71 VMSEE--LITITAEASVEEASKLMAQHQIRRLP 101
>gi|375008052|ref|YP_004981685.1| hypothetical protein [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359286901|gb|AEV18585.1| CBS domain protein [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 141
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D +Y+A M NVGA+ +V G + G+IT+RD I+V+G + K ST
Sbjct: 14 YCTPLDNLYEAAVKMRDFNVGAIPIVDDGR---LVGMITDRD----IVVRGMAEKRPGST 66
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
V ++M+ + L+T+SPD V +A +M H +
Sbjct: 67 AVTEVMSRD--LVTLSPDDSVQKAADMMARHQI 97
>gi|218901915|ref|YP_002449749.1| hypothetical protein BCAH820_0797 [Bacillus cereus AH820]
gi|229120369|ref|ZP_04249616.1| CBS domain protein [Bacillus cereus 95/8201]
gi|218538112|gb|ACK90510.1| CBS domain protein [Bacillus cereus AH820]
gi|228662954|gb|EEL18547.1| CBS domain protein [Bacillus cereus 95/8201]
Length = 139
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 14/98 (14%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CTT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTTLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
K+ ++MT +I+VSPD + +A +LM H + LP
Sbjct: 66 NKITNVMT--TNIISVSPDDSIEKATELMAQHQIRRLP 101
>gi|423398404|ref|ZP_17375605.1| hypothetical protein ICU_04098 [Bacillus cereus BAG2X1-1]
gi|423409267|ref|ZP_17386416.1| hypothetical protein ICY_03952 [Bacillus cereus BAG2X1-3]
gi|401647620|gb|EJS65226.1| hypothetical protein ICU_04098 [Bacillus cereus BAG2X1-1]
gi|401656264|gb|EJS73787.1| hypothetical protein ICY_03952 [Bacillus cereus BAG2X1-3]
Length = 139
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 12/95 (12%)
Query: 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK--- 127
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K
Sbjct: 12 LIHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPG 64
Query: 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
S K+ ++MT K+++VSPD + +A +LM H +
Sbjct: 65 SNKITNVMT--TKIVSVSPDDSIEKATELMAQHQI 97
>gi|114331513|ref|YP_747735.1| signal-transduction protein [Nitrosomonas eutropha C91]
gi|114308527|gb|ABI59770.1| putative signal-transduction protein with CBS domains [Nitrosomonas
eutropha C91]
Length = 146
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D+V DA++ MT +N+GAL+VVK K + GI+TERD+ RK + RS K +V +IMT
Sbjct: 22 DSVSDAMQKMTTNNIGALLVVK---DKKLIGILTERDFSRKYCLLNRSVKDMRVEEIMTR 78
Query: 138 ENKLITVSPDTKVLRAMQLMT 158
+ + V D M LMT
Sbjct: 79 Q--VAYVGLDYTNEDCMALMT 97
>gi|381187230|ref|ZP_09894795.1| putative signal-transduction protein [Flavobacterium frigoris PS1]
gi|379650840|gb|EIA09410.1| putative signal-transduction protein [Flavobacterium frigoris PS1]
Length = 115
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
M + N+GA++V+ E + G+++ERDY RKI+++ +SSK T V +IM E +ITV P
Sbjct: 1 MGEKNIGAVLVI---EDSLLKGVLSERDYARKIVLKDKSSKETLVSEIM--EGSVITVKP 55
Query: 147 DTKVLRAMQLMT 158
+ M+LMT
Sbjct: 56 TDNLEYCMELMT 67
>gi|56419625|ref|YP_146943.1| hypothetical protein GK1090 [Geobacillus kaustophilus HTA426]
gi|56379467|dbj|BAD75375.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 141
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D +Y+A M NVGA+ ++ G + G+IT+RD I+V+G + K ST
Sbjct: 14 YCTPLDNLYEAAVKMRDFNVGAIPIIDDGR---LVGMITDRD----IVVRGMAEKRPGST 66
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
V ++M+ + L+T+SPD V +A +M H +
Sbjct: 67 AVTEVMSRD--LVTLSPDDSVQKAADMMARHQI 97
>gi|84500150|ref|ZP_00998416.1| CBS [Oceanicola batsensis HTCC2597]
gi|84392084|gb|EAQ04352.1| CBS [Oceanicola batsensis HTCC2597]
Length = 142
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+IS+I++ + + T D TV DA + + +H +GAL V+ G+ + GI++ERD
Sbjct: 5 SISEIIRNR------TLRHATPDMTVRDACRILDEHAIGALPVLDGGK---LLGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEE 138
+R++IV+ R +TKV ++MT E
Sbjct: 56 VIRRVIVRDRDPSATKVSEVMTPE 79
>gi|262370497|ref|ZP_06063823.1| CBS domain-containing protein [Acinetobacter johnsonii SH046]
gi|262314839|gb|EEY95880.1| CBS domain-containing protein [Acinetobacter johnsonii SH046]
Length = 143
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ +LK K A + + TV++A+ M +GALVV ++ V GI++ER
Sbjct: 2 TNVAQVLKDKVHQA---IYTISPEATVFEAISLMADKGIGALVVT---HEERVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMT 136
DY+RK+++ R+SK T V +IMT
Sbjct: 56 DYMRKVMLMERTSKQTTVNEIMT 78
>gi|348670893|gb|EGZ10714.1| hypothetical protein PHYSODRAFT_563613 [Phytophthora sojae]
Length = 546
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 12/112 (10%)
Query: 55 TISDILKAKGKGADGS--------WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSV 106
TI+D+L A+ + + W +TV+DAV +M + N+G+L+V + E +
Sbjct: 93 TIADVLNAREQELATNKALFDFEEWESIAGTETVHDAVLTMVERNIGSLIVTEAKE--GI 150
Query: 107 AGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
GI+TERD L+KI + S+ V D+M+ + ++ + P T V+ A+ MT
Sbjct: 151 VGIVTERDILKKISPRTVLSEEKFVHDVMS--SHIMCIHPSTTVIDALATMT 200
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
TV +AV+ M + N GA++VV +++ V GI TERDY+RK++ + + V D+M+
Sbjct: 340 TVAEAVEEMAKRNFGAVLVV--DKEQRVLGIFTERDYIRKVLFELKDPTKLLVTDVMS 395
>gi|125974837|ref|YP_001038747.1| signal-transduction protein [Clostridium thermocellum ATCC 27405]
gi|256004903|ref|ZP_05429876.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum DSM 2360]
gi|281418708|ref|ZP_06249727.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum JW20]
gi|385780279|ref|YP_005689444.1| signal transduction protein [Clostridium thermocellum DSM 1313]
gi|419722457|ref|ZP_14249600.1| CBS domain containing protein [Clostridium thermocellum AD2]
gi|419726592|ref|ZP_14253613.1| CBS domain containing protein [Clostridium thermocellum YS]
gi|125715062|gb|ABN53554.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum ATCC 27405]
gi|255991083|gb|EEU01192.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum DSM 2360]
gi|281407792|gb|EFB38051.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum JW20]
gi|316941959|gb|ADU75993.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum DSM 1313]
gi|380769876|gb|EIC03775.1| CBS domain containing protein [Clostridium thermocellum YS]
gi|380781469|gb|EIC11124.1| CBS domain containing protein [Clostridium thermocellum AD2]
Length = 142
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ + +V +A + M +HNVG++ V G V GI+T+RD + + + G++ K TKV
Sbjct: 13 YVSPQSSVVEAAQLMQKHNVGSIPVYDQG----VVGIVTDRDIVVRNVAHGKTPKDTKVQ 68
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT +++ TV+PD V +LM +
Sbjct: 69 DVMT--SQVTTVTPDMDVEEVTKLMANQQI 96
>gi|82701472|ref|YP_411038.1| signal-transduction protein [Nitrosospira multiformis ATCC 25196]
gi|82409537|gb|ABB73646.1| putative signal-transduction protein with CBS domains [Nitrosospira
multiformis ATCC 25196]
Length = 147
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 9/105 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+ ++L+ GKG + + + D +VY+A+ M N+GAL+V+ G+ + GI TER
Sbjct: 2 TTVKELLE--GKGYEVASI--EPDKSVYEAMHLMAAKNIGALLVLHRGK---LVGIFTER 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
DY RK R +K +V ++MT + + VSPD M L+T
Sbjct: 55 DYSRKAYSLDRLAKDIQVKELMTAQ--VAYVSPDYSTEDCMALVT 97
>gi|345870085|ref|ZP_08822040.1| putative signal transduction protein with CBS domains
[Thiorhodococcus drewsii AZ1]
gi|343922472|gb|EGV33174.1| putative signal transduction protein with CBS domains
[Thiorhodococcus drewsii AZ1]
Length = 142
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 69 GSWLWCTTDD-TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127
GS LW D +VY+A+ M + +GA+VV+ + G+++ERDY R + RS K
Sbjct: 12 GSRLWSIAPDASVYEALALMAERRIGAVVVI---DDTGPIGLLSERDYARDAVHNTRSPK 68
Query: 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
T V DIMT ++ P+ + +AM +MT
Sbjct: 69 ETLVRDIMT--RHVVCAPPELTLDQAMAVMT 97
>gi|94967662|ref|YP_589710.1| signal-transduction protein [Candidatus Koribacter versatilis
Ellin345]
gi|94549712|gb|ABF39636.1| putative signal-transduction protein with CBS domains [Candidatus
Koribacter versatilis Ellin345]
Length = 142
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D +V +AV M ++NVGA+ V+ G + GI +ERD + +++V+G ST V +MT
Sbjct: 21 DQSVIEAVHFMVENNVGAVPVLDHGH---LVGIFSERDVMTRVVVRGMDPHSTTVETVMT 77
Query: 137 EENKLITVSPDTKVLRAMQLMTGH 160
E + V+P+T V M LM H
Sbjct: 78 PEP--LAVAPETSVHDCMVLMKQH 99
>gi|451982233|ref|ZP_21930554.1| conserved hypothetical protein, contains CBS-domains [Nitrospina
gracilis 3/211]
gi|451760526|emb|CCQ91836.1| conserved hypothetical protein, contains CBS-domains [Nitrospina
gracilis 3/211]
Length = 139
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+T+ DA + M + VG+LVVV K GI+TE D+ RK++ +G K+ KVGDIMT
Sbjct: 28 NTIKDAAEFMHEKQVGSLVVV---NGKKPVGIVTETDFARKVVAKGLDPKTAKVGDIMT- 83
Query: 138 ENKLITVSPDTKVLRAMQLM 157
L T+ VL A +LM
Sbjct: 84 -TPLQTIDCHESVLDANKLM 102
>gi|421858959|ref|ZP_16291208.1| FOG: CBS domain [Paenibacillus popilliae ATCC 14706]
gi|410831478|dbj|GAC41645.1| FOG: CBS domain [Paenibacillus popilliae ATCC 14706]
Length = 142
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 12/96 (12%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK-- 127
S + CT D +Y+A M QH+ G + +V GE+ V G++T+RD ++++G + K
Sbjct: 11 SIVTCTAQDNIYEAAVKMKQHDTGFIPIVD-GER--VIGVVTDRD----LVIRGMADKHP 63
Query: 128 -STKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
ST V D+MTE+ +IT+ P+ + +LM H +
Sbjct: 64 GSTSVRDVMTED--VITIGPEATIDETAELMADHQV 97
>gi|423609286|ref|ZP_17585147.1| hypothetical protein IIM_00001 [Bacillus cereus VD107]
gi|401251904|gb|EJR58172.1| hypothetical protein IIM_00001 [Bacillus cereus VD107]
Length = 139
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 12/96 (12%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK-- 127
+ + CT D VY+A M + +G + VV E + V G++T+RD ++V+G + K
Sbjct: 11 NIVQCTPLDNVYEAAVKMKEEAIGMIPVV---ENEQVIGLVTDRD----LVVRGIAEKHP 63
Query: 128 -STKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
S K+ D+MT ++++SPD + RA +LM H +
Sbjct: 64 GSNKITDVMT--TNIVSISPDDSIERATELMAQHQI 97
>gi|384565116|ref|ZP_10012220.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora glauca K62]
gi|384520970|gb|EIE98165.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora glauca K62]
Length = 138
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
L+ T +TV A ++M VGAL + GE + G++T+RD + K++ +G+ + V
Sbjct: 13 LYAETSETVTHAARTMADKGVGALPIR--GEDHKLKGMLTDRDIVVKVLAEGKDPVAVHV 70
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
G++ +E ++ V PD V A++LM+ H +
Sbjct: 71 GELPRDE--VVAVGPDDDVEEALRLMSRHQV 99
>gi|124028007|ref|YP_001013327.1| hypothetical protein Hbut_1145 [Hyperthermus butylicus DSM 5456]
gi|123978701|gb|ABM80982.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
Length = 153
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 15/118 (12%)
Query: 48 EHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVA 107
E E ISD++ + + C DDTV DA + M ++++G++VVV ++ ++
Sbjct: 6 EIAPEELKISDVMTP-------NVITCKPDDTVVDAARKMAKYSIGSVVVVD--DKGTIL 56
Query: 108 GIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM----TGHM 161
GI+TE D +R+++ +G T V D+MT +T+ D + A + M GH+
Sbjct: 57 GILTEGDIVRRVVARGLDPSRTLVRDVMT--TNPVTIYSDATLAAAAEYMKRKGIGHL 112
>gi|219121815|ref|XP_002181254.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407240|gb|EEC47177.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 182
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVV-KPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
D VYDAV+ N+G LV K G ++ G+++ERDY+ KI + GR+SK T V +I
Sbjct: 49 DTPVYDAVQKFAAFNIGCLVTTDKAG---NMTGVVSERDYICKIALLGRTSKETPVKEIA 105
Query: 136 TEENKLITVSPDTKVLRAMQLM 157
T +IT V M+ M
Sbjct: 106 TRGANIITAKAGESVESCMEKM 127
>gi|341581159|ref|YP_004761651.1| hypothetical protein GQS_00355 [Thermococcus sp. 4557]
gi|340808817|gb|AEK71974.1| hypothetical protein GQS_00355 [Thermococcus sp. 4557]
Length = 177
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDTV+ K ++++ VG+ VVVK E + GIIT+RD L K++ +GR K+ KV ++MT
Sbjct: 21 DDTVHRIAKILSKNKVGSAVVVKGDE---IVGIITDRDILDKVVAKGRDPKTVKVEEVMT 77
Query: 137 EENKLITVSPDTKVLRAMQLM 157
+ IT+ D +V A+ M
Sbjct: 78 KNP--ITIEDDYEVQDAIDKM 96
>gi|254468074|ref|ZP_05081480.1| inosine-5'-monophosphate dehydrogenase [beta proteobacterium KB13]
gi|207086884|gb|EDZ64167.1| inosine-5'-monophosphate dehydrogenase [beta proteobacterium KB13]
Length = 143
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Query: 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS 128
L D V DA+ M ++ +GAL+V+ ++ + GII+ERDY R+I+++G+SSK
Sbjct: 14 NDILSVEPDRPVIDALIIMAEYKIGALLVM---QKNKLLGIISERDYAREIVLKGKSSKE 70
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ ++MT+ +IT+ + + +++MT
Sbjct: 71 CLIEEVMTK--NVITIDANDTYDKGLEIMT 98
>gi|300784312|ref|YP_003764603.1| signal transduction protein [Amycolatopsis mediterranei U32]
gi|384147578|ref|YP_005530394.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|399536197|ref|YP_006548859.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|299793826|gb|ADJ44201.1| signal transduction protein [Amycolatopsis mediterranei U32]
gi|340525732|gb|AEK40937.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|398316967|gb|AFO75914.1| signal transduction protein [Amycolatopsis mediterranei S699]
Length = 143
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 10/104 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + T + TV + + HNVGA+VVV P S+AGI++ERD
Sbjct: 3 IADLLRKKGS----AVATVTPETTVTALLAGLADHNVGAMVVVAP--DGSIAGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLI-TVSPDTKVLRAMQLMT 158
+R++ G + V +IMT KL+ + SPD V + LMT
Sbjct: 57 VRRLNEHGPALLDGPVSEIMT---KLVASCSPDDSVDQLSVLMT 97
>gi|254467032|ref|ZP_05080443.1| CBS domain protein [Rhodobacterales bacterium Y4I]
gi|206687940|gb|EDZ48422.1| CBS domain protein [Rhodobacterales bacterium Y4I]
Length = 144
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL AKG G+ + V DA+K M + +VG+++V+ G+ +AGI TER
Sbjct: 3 TVQQILDAKG----GTLHTLPPEAMVVDALKLMAEEDVGSVLVMSGGK---LAGIFTERH 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
Y RK+ + G++S +T + D+M + V P M +M
Sbjct: 56 YTRKVFLAGKTSPTTPLADVMATD--FYGVEPGQSAEACMAVM 96
>gi|359800655|ref|ZP_09303194.1| hypothetical protein KYC_26852 [Achromobacter arsenitoxydans SY8]
gi|359361356|gb|EHK63114.1| hypothetical protein KYC_26852 [Achromobacter arsenitoxydans SY8]
Length = 122
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
+++AVK+M + ++GA+VVV+ V G++TERDY RKI++Q RSS++TKV +IMTE
Sbjct: 1 MFEAVKTMAERSIGAVVVVE---GDVVLGMLTERDYARKIVLQDRSSRTTKVREIMTE-- 55
Query: 140 KLITVSPDTKVLRAMQLMT 158
+ V P M +MT
Sbjct: 56 SVYYVGPADTREHCMAMMT 74
>gi|256810616|ref|YP_003127985.1| putative signal transduction protein with CBS domains
[Methanocaldococcus fervens AG86]
gi|256793816|gb|ACV24485.1| putative signal transduction protein with CBS domains
[Methanocaldococcus fervens AG86]
Length = 194
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 11/92 (11%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T D T+YD MT++N+GA+V+V E GI+TERD +++++ SK+ K
Sbjct: 18 ITATKDMTIYDIANIMTENNIGAVVIV---ENNKPVGILTERDIVKRVV-----SKNLKP 69
Query: 132 GDIMTEE---NKLITVSPDTKVLRAMQLMTGH 160
D++ EE K++T+ + + A ++M H
Sbjct: 70 KDVLAEEVMSKKIVTIPQNASLTEAAKIMATH 101
>gi|289192998|ref|YP_003458939.1| signal transduction protein with CBS domains [Methanocaldococcus
sp. FS406-22]
gi|288939448|gb|ADC70203.1| putative signal transduction protein with CBS domains
[Methanocaldococcus sp. FS406-22]
Length = 194
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 11/89 (12%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T D TVY+ MT++N+GA+V+V E GI+TERD +++++ SK+ K D+
Sbjct: 21 TKDMTVYEIANIMTENNIGAVVIV---ENNKPIGIVTERDIVKRVV-----SKNLKPKDV 72
Query: 135 MTEE---NKLITVSPDTKVLRAMQLMTGH 160
+ EE K+IT+ + + A ++M H
Sbjct: 73 LAEEVMSKKIITIPQNASITEAAKIMATH 101
>gi|386817222|ref|ZP_10104440.1| putative signal transduction protein with CBS domains [Thiothrix
nivea DSM 5205]
gi|386421798|gb|EIJ35633.1| putative signal transduction protein with CBS domains [Thiothrix
nivea DSM 5205]
Length = 142
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 62/105 (59%), Gaps = 11/105 (10%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TIS +L KG S ++ V +AVK+M + VGAL+V+ G+ K GII+E+
Sbjct: 3 TISQVLARKG-----SEVYSVAPAARVIEAVKTMAEKRVGALLVLDNGKLK---GIISEQ 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
DY RKI+++ R ++ +V + MT + ++ ++P+ + M +MT
Sbjct: 55 DYTRKIVLRDRIAEHLRVDEAMT--SPVVCITPEHSIQDGMAIMT 97
>gi|301107764|ref|XP_002902964.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098082|gb|EEY56134.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 438
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 55 TISDILKAKGKGADGS--------WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSV 106
TI+D+L A+ + + W +TV+DAV +M + N+G+L+V K Q+ +
Sbjct: 94 TIADVLNAREQELATNKALFDFEEWESIAGTETVHDAVLTMVERNIGSLIVTKA--QEGI 151
Query: 107 AGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
GI+TERD L+KI + ++ V ++M+ + ++ + P T V+ A+ MT
Sbjct: 152 VGIVTERDILKKISPRTVMTEEKFVHNVMS--SHIMCIHPSTTVIDALATMT 201
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
TV +AV+ M + + GA++VV +++ V GI TERDY+RK++ + + V D+M+
Sbjct: 327 TVAEAVEEMAKRDFGAVLVV--DKEQRVLGIFTERDYIRKVLFEVKDPTKLLVTDVMS 382
>gi|390961930|ref|YP_006425764.1| hypothetical protein CL1_1774 [Thermococcus sp. CL1]
gi|390520238|gb|AFL95970.1| hypothetical protein CL1_1774 [Thermococcus sp. CL1]
Length = 177
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDTV+ + ++++ VG+ VVVK E + GIIT+RD L K++ +GR K+ KV ++MT
Sbjct: 21 DDTVHRVARILSKNKVGSAVVVKDDE---IVGIITDRDILDKVVAKGRDPKTVKVEEVMT 77
Query: 137 EENKLITVSPDTKVLRAMQLM 157
+ IT+ D +V A+ M
Sbjct: 78 KNP--ITIEDDYEVQDAIDKM 96
>gi|452974607|gb|EME74427.1| hypothetical protein BSONL12_11576 [Bacillus sonorensis L12]
Length = 148
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
L+CT D VY+A M + NVGA+ VV+ + + GI+T+RD + + I + S
Sbjct: 11 DLLYCTVLDNVYEAAVKMKEGNVGAIPVVRD-DSFELVGIVTDRDLVLRGIAD-KKPNSQ 68
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLM 157
KV ++MT E LIT++ D + +A++LM
Sbjct: 69 KVTNVMTTE--LITLNEDDSLEKAIELM 94
>gi|119899436|ref|YP_934649.1| hypothetical protein azo3146 [Azoarcus sp. BH72]
gi|119671849|emb|CAL95763.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 162
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
+ T+ IL+ KG C+ V++A+ M + ++G+++VV + + + GI TE
Sbjct: 16 TVTVRQILEEKGSRTYSVRPDCS----VFEALGVMAEFDIGSVIVV---DNERLVGIFTE 68
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
RDY RK++++G S+ V ++MT TV+P V M +MT
Sbjct: 69 RDYARKVVLKGLGSRDVSVSELMTPNP--CTVTPTHTVDEVMAIMT 112
>gi|94496674|ref|ZP_01303250.1| hypothetical protein SKA58_18257 [Sphingomonas sp. SKA58]
gi|94424034|gb|EAT09059.1| hypothetical protein SKA58_18257 [Sphingomonas sp. SKA58]
Length = 183
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 35 SSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGA 94
SSR A E G ++ TI+ IL+ KG + D+V AV+ + +G
Sbjct: 23 SSRNRITGPADAGEQGEQAMTIATILQRKGNDV----IQVEPSDSVLSAVRLLADQRIGC 78
Query: 95 LVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAM 154
+ VV G+ V GI +ERD + ++ G S+ VG++MT IT+ T V++ +
Sbjct: 79 VPVVANGQ---VVGIFSERDLVYRVAQDGPSALDHSVGEVMTA--PAITIDEQTSVMQGL 133
Query: 155 QLMT 158
LMT
Sbjct: 134 SLMT 137
>gi|403054435|ref|ZP_10908919.1| hypothetical protein AberL1_23541 [Acinetobacter bereziniae LMG
1003]
gi|445416078|ref|ZP_21434367.1| CBS domain protein [Acinetobacter sp. WC-743]
gi|444762514|gb|ELW86877.1| CBS domain protein [Acinetobacter sp. WC-743]
Length = 143
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV +A+ M +GA+VV E V GI++ERDY RKI + R+S T V +IMT
Sbjct: 24 TVLEAITLMANKGIGAVVVT---EDTKVVGILSERDYTRKIALMQRTSDHTTVAEIMT-- 78
Query: 139 NKLITVSPDTKVLRAMQLMT-GHM 161
+K+I+V+ V + + LMT GH+
Sbjct: 79 SKVISVTRSHTVEQCLGLMTDGHL 102
>gi|327401358|ref|YP_004342197.1| signal transduction protein [Archaeoglobus veneficus SNP6]
gi|327316866|gb|AEA47482.1| putative signal transduction protein with CBS domains
[Archaeoglobus veneficus SNP6]
Length = 180
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 74 CT--TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
CT D+T++ A K M + VG++VVV E GI+TE+D L K++ + R+ K+
Sbjct: 16 CTGNPDETLFSAAKRMLEFGVGSIVVV---EDHKPLGIVTEKDILEKVVAKNRTPSEVKL 72
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLM 157
+IM+ LIT+ P T V A +M
Sbjct: 73 KEIMS--YPLITIKPTTSVREAADIM 96
>gi|358011810|ref|ZP_09143620.1| CBS domain pair family protein [Acinetobacter sp. P8-3-8]
Length = 143
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV A+ M +GA+VV + V GI++ERDY RKI + R+S T V +IMT
Sbjct: 24 TVLAAITLMANKGIGAVVVT---QDSKVVGILSERDYTRKIALMQRTSDHTTVAEIMTP- 79
Query: 139 NKLITVSPDTKVLRAMQLMT-GHM 161
K+I+V+P V + LMT GH+
Sbjct: 80 -KVISVTPSHTVDDCLSLMTDGHL 102
>gi|225174496|ref|ZP_03728495.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Dethiobacter alkaliphilus AHT 1]
gi|225170281|gb|EEG79076.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Dethiobacter alkaliphilus AHT 1]
Length = 645
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Query: 32 PVVSSRFESVSSARM------EEHGFESTTISD--ILKAKGKGADGSWLWCTTDDTVYDA 83
P SS+F + +ARM + G S + D + K + C + + + D
Sbjct: 133 PEFSSQFSKILTARMRLIYHIQMSGASSGYVIDQPMHKRVADLMSAPVITCLSGNEITDL 192
Query: 84 VKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLIT 143
++MT NV +++V E+ GIITE+D ++K++ G KS K DIM+E L+T
Sbjct: 193 ARTMTSRNVSSIIVTDQDEKP--IGIITEKDLVKKVVAAGCFVKSLKAEDIMSE--NLLT 248
Query: 144 VSPDTKVLRAMQLMTGH 160
V D A+ M H
Sbjct: 249 VKSDAFYYEALLTMVEH 265
>gi|407645157|ref|YP_006808916.1| hypothetical protein O3I_019915 [Nocardia brasiliensis ATCC 700358]
gi|407308041|gb|AFU01942.1| hypothetical protein O3I_019915 [Nocardia brasiliensis ATCC 700358]
Length = 144
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I++IL+ KG D TV + ++ +HN+GA+VV GE + GI++ERD
Sbjct: 3 IAEILRRKG----CDVATVAPDTTVRSLLATLAEHNIGAVVVTPDGE--GIVGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
+R + +G T V DIMT + + T PD +V MT H +
Sbjct: 57 VRTLHARGAELLDTPVADIMTTDVR--TCGPDDEVDSLRNTMTEHRI 101
>gi|399065218|ref|ZP_10747815.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Novosphingobium sp. AP12]
gi|398029892|gb|EJL23337.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Novosphingobium sp. AP12]
Length = 141
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS 128
G + C TV DAV ++ +GA+ V++ GE +AGI +ERD + ++ G
Sbjct: 11 GDVVTCDVSTTVRDAVGILSDRRIGAVPVMEDGE---IAGIFSERDVIYRLREMGAEVLD 67
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+G IMT +TV PDT V+ A+ LMT
Sbjct: 68 MPLGHIMTASP--VTVDPDTAVIAALSLMT 95
>gi|302337838|ref|YP_003803044.1| signal transduction protein with CBS domains [Spirochaeta
smaragdinae DSM 11293]
gi|301635023|gb|ADK80450.1| putative signal transduction protein with CBS domains [Spirochaeta
smaragdinae DSM 11293]
Length = 147
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 13/108 (12%)
Query: 55 TISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TI D+L KG AD +W + TV+ A+ M++ NVGA+VV+ +Q+ + GI +ER
Sbjct: 3 TIKDLLAQKG--AD---IWSVRPETTVFQALSLMSEKNVGAVVVL--DDQQKMIGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTK---VGDIMTEENKLITVSPDTKVLRAMQLMT 158
DY RK I S + + V ++MT E ++ + P+T V M LMT
Sbjct: 56 DYARKTIGAIGSQECPRDLPVKELMTTE--VVAIKPETGVETCMALMT 101
>gi|209522266|ref|ZP_03270897.1| CBS domain containing protein [Burkholderia sp. H160]
gi|209497300|gb|EDZ97524.1| CBS domain containing protein [Burkholderia sp. H160]
Length = 155
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 61/105 (58%), Gaps = 9/105 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D T++DAV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKGN----TLFTVTPDTTLHDAVDTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
+ + G S ++ + +M ++ +T +P+T V ++M H
Sbjct: 56 ILTLSTNGGSVGTSTIRKVM--DDHPLTCTPETDVNEVRRMMLEH 98
>gi|381196126|ref|ZP_09903468.1| hypothetical protein AlwoW_02540 [Acinetobacter lwoffii WJ10621]
Length = 143
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ +LK K A + + TV +A+ M +GALVV +++ V GI++ER
Sbjct: 2 TNVAQVLKDKVHQA---IYTISPEATVLEAISLMADKGIGALVVT---QEERVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMT 136
DY+RK+++ R+SK T V +IMT
Sbjct: 56 DYMRKVMLMERTSKQTTVNEIMT 78
>gi|398304641|ref|ZP_10508227.1| putative oxidoreductase [Bacillus vallismortis DV1-F-3]
Length = 148
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVV-KPGEQKSVAGIITERDY-LRKIIVQGRSSKSTK 130
+CT D VY+A M N+GA+ VV K GE ++ GI+T+RD LR I + + S K
Sbjct: 14 YCTVLDNVYEAAVKMKDANIGAVPVVDKDGE--TLVGIVTDRDLVLRGIAI--KKPNSQK 69
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
+ D MTE K ++V D V + LM H L
Sbjct: 70 ITDAMTE--KPVSVEEDASVDEVLHLMASHQL 99
>gi|384175235|ref|YP_005556620.1| CBS domain pair sporulation protein YlbB [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
gi|349594459|gb|AEP90646.1| CBS domain pair sporulation protein YlbB [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
Length = 148
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 13/110 (11%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T I D++ A +CT D VY+A M NVGA+ VV + +++ GI+T+R
Sbjct: 2 TKIKDLMTA-------DLQYCTVLDNVYEAAVKMKDANVGAIPVVDE-DGETLVGIVTDR 53
Query: 114 DY-LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D LR I + + S K+ D MTE K ++V D V + LM H L
Sbjct: 54 DLVLRGIAI--KKPNSQKITDAMTE--KPVSVEEDASVDEVLHLMASHQL 99
>gi|410455393|ref|ZP_11309273.1| inosine-5'-monophosphate dehydrogenase related protein [Bacillus
bataviensis LMG 21833]
gi|409929220|gb|EKN66305.1| inosine-5'-monophosphate dehydrogenase related protein [Bacillus
bataviensis LMG 21833]
Length = 144
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 14/97 (14%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
CT D +++ M + NVGA+ +V +++ + G+IT+RD I+++G + K ST
Sbjct: 14 CCTLLDNLFEVAVKMKELNVGAIPIV---DEEKLVGMITDRD----IVIRGVAEKHPGST 66
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
KV DIM++ L+TV+PDT A +LM H + LP
Sbjct: 67 KVEDIMSK--TLVTVTPDTSSRDAAKLMAEHQIRRLP 101
>gi|114798278|ref|YP_761342.1| hypothetical protein HNE_2660 [Hyphomonas neptunium ATCC 15444]
gi|114738452|gb|ABI76577.1| CBS domain protein [Hyphomonas neptunium ATCC 15444]
Length = 144
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKP-GEQKSVAGIITERD 114
I IL KG+ + DDT+ +A + + + +GA+V + GE + G+++ERD
Sbjct: 3 IEQILNDKGR----EVITLRADDTLREAARLLDERRIGAVVTLDADGE---IVGVLSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R+ QG + VG+ MT +IT+S D +V A+QLMT
Sbjct: 56 IVRQFARQGEGALDMPVGNAMT--RAVITISADAEVDEALQLMT 97
>gi|89099565|ref|ZP_01172440.1| hypothetical protein B14911_11287 [Bacillus sp. NRRL B-14911]
gi|89085718|gb|EAR64844.1| hypothetical protein B14911_11287 [Bacillus sp. NRRL B-14911]
Length = 143
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 14/97 (14%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
CT D +Y+ M + +VGA+ +V + + G+IT+RD I+V+G + K ST
Sbjct: 14 CCTLLDNMYEVALKMKEQDVGAIPIV---DADRLVGMITDRD----IVVRGVAEKHPGST 66
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
KV DIM+ + L+TVSPD + A ++M H + LP
Sbjct: 67 KVEDIMSSD--LVTVSPDANISEASRIMAEHQIRRLP 101
>gi|350265803|ref|YP_004877110.1| CBS domain pair sporulation protein YlbB [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|349598690|gb|AEP86478.1| CBS domain pair sporulation protein YlbB [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 148
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY-LRKIIVQGRSSKSTKV 131
+CT D VY+A M NVGA+ VV + +++ GI+T+RD LR I + + S K+
Sbjct: 14 YCTVLDNVYEAAVKMKDANVGAIPVVDE-DGETLVGIVTDRDLVLRGIAI--KKPNSQKI 70
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D MTE K ++V D V + LM H L
Sbjct: 71 TDAMTE--KPVSVDEDASVDEVLHLMASHQL 99
>gi|73541445|ref|YP_295965.1| hypothetical protein Reut_A1756 [Ralstonia eutropha JMP134]
gi|72118858|gb|AAZ61121.1| CBS [Ralstonia eutropha JMP134]
Length = 155
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DD V A++ M ++ ++V+ ++AGI+++RDY R + + GRS+ +TKV DIMT
Sbjct: 25 DDFVLAALQLMADKDISTVLVM---HGDTLAGILSQRDYARGVELAGRSASATKVRDIMT 81
Query: 137 EENKLITVSPDTKVLRAMQLM 157
K++ VSPD + + LM
Sbjct: 82 --TKVVCVSPDHTCDQCLALM 100
>gi|365161510|ref|ZP_09357652.1| hypothetical protein HMPREF1014_03115 [Bacillus sp. 7_6_55CFAA_CT2]
gi|363620444|gb|EHL71731.1| hypothetical protein HMPREF1014_03115 [Bacillus sp. 7_6_55CFAA_CT2]
Length = 139
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+VSPD + +A +LM H +
Sbjct: 66 NKITNVMT--TNIISVSPDDSIEKATELMAQHQI 97
>gi|255767340|ref|NP_389378.2| oxidoreductase [Bacillus subtilis subsp. subtilis str. 168]
gi|296331070|ref|ZP_06873544.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305674225|ref|YP_003865897.1| oxidoreductase [Bacillus subtilis subsp. spizizenii str. W23]
gi|321315257|ref|YP_004207544.1| putative oxidoreductase [Bacillus subtilis BSn5]
gi|402775739|ref|YP_006629683.1| oxidoreductase [Bacillus subtilis QB928]
gi|418033361|ref|ZP_12671838.1| putative oxidoreductase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|428279087|ref|YP_005560822.1| hypothetical protein BSNT_02482 [Bacillus subtilis subsp. natto
BEST195]
gi|430756023|ref|YP_007209803.1| hypothetical protein A7A1_0531 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|449094190|ref|YP_007426681.1| putative oxidoreductase [Bacillus subtilis XF-1]
gi|452914312|ref|ZP_21962939.1| CBS domain protein [Bacillus subtilis MB73/2]
gi|264664572|sp|O34682.2|YLBB_BACSU RecName: Full=Uncharacterized protein YlbB
gi|225184967|emb|CAB13368.2| putative oxidoreductase [Bacillus subtilis subsp. subtilis str.
168]
gi|291484044|dbj|BAI85119.1| hypothetical protein BSNT_02482 [Bacillus subtilis subsp. natto
BEST195]
gi|296151714|gb|EFG92589.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305412469|gb|ADM37588.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|320021531|gb|ADV96517.1| putative oxidoreductase [Bacillus subtilis BSn5]
gi|351469509|gb|EHA29685.1| putative oxidoreductase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|402480922|gb|AFQ57431.1| Putative oxidoreductase [Bacillus subtilis QB928]
gi|407958901|dbj|BAM52141.1| oxidoreductase [Synechocystis sp. PCC 6803]
gi|407964479|dbj|BAM57718.1| oxidoreductase [Bacillus subtilis BEST7003]
gi|430020543|gb|AGA21149.1| Hypothetical protein YlbB [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|449028105|gb|AGE63344.1| putative oxidoreductase [Bacillus subtilis XF-1]
gi|452116732|gb|EME07127.1| CBS domain protein [Bacillus subtilis MB73/2]
Length = 148
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY-LRKIIVQGRSSKSTKV 131
+CT D VY+A M NVGA+ VV + +++ GI+T+RD LR I + + S K+
Sbjct: 14 YCTVLDNVYEAAVKMKDANVGAIPVVDE-DGETLVGIVTDRDLVLRGIAI--KKPNSQKI 70
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D MTE K ++V D V + LM H L
Sbjct: 71 TDAMTE--KPVSVEEDASVDEVLHLMASHQL 99
>gi|335041034|ref|ZP_08534151.1| CBS domain containing protein [Caldalkalibacillus thermarum TA2.A1]
gi|334179011|gb|EGL81659.1| CBS domain containing protein [Caldalkalibacillus thermarum TA2.A1]
Length = 152
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 19/111 (17%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TISDI+ + C +D +Y+A M +VG + VV + G+IT+RD
Sbjct: 5 TISDIMTRQVN-------CCIPEDNIYEAAVKMKTWDVGIIPVVS---NDQLLGVITDRD 54
Query: 115 YLRKIIVQG---RSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
I+++G R ST+V ++MT + +IT SPDT V A QLM+ H +
Sbjct: 55 ----IVIRGVAERKPNSTQVTEVMTAD--VITCSPDTTVDEAAQLMSRHQI 99
>gi|66045596|ref|YP_235437.1| hypothetical protein Psyr_2360 [Pseudomonas syringae pv. syringae
B728a]
gi|422675469|ref|ZP_16734813.1| CBS domain-containing protein [Pseudomonas syringae pv. aceris str.
M302273]
gi|63256303|gb|AAY37399.1| CBS [Pseudomonas syringae pv. syringae B728a]
gi|330973187|gb|EGH73253.1| CBS domain-containing protein [Pseudomonas syringae pv. aceris str.
M302273]
Length = 146
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA+K M + N+GAL E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLDALKLMAEKNIGAL---PVVEGNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+K+ITV V M +MT
Sbjct: 81 --SKVITVDSQRSVEACMGIMT 100
>gi|422607452|ref|ZP_16679451.1| CBS domain-containing protein [Pseudomonas syringae pv. mori str.
301020]
gi|330891093|gb|EGH23754.1| CBS domain-containing protein [Pseudomonas syringae pv. mori str.
301020]
Length = 146
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ MT+ N+GAL E V G+++ERDY RK+I++GRSS T V +IM+
Sbjct: 24 DQMVLDALRLMTEKNIGAL---PVVEGNVVVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
NK+ITV V M +MT
Sbjct: 81 --NKVITVDSQQSVEACMGIMT 100
>gi|261419287|ref|YP_003252969.1| signal transduction protein with CBS domains [Geobacillus sp.
Y412MC61]
gi|319766103|ref|YP_004131604.1| signal transduction protein with CBS domains [Geobacillus sp.
Y412MC52]
gi|261375744|gb|ACX78487.1| putative signal transduction protein with CBS domains [Geobacillus
sp. Y412MC61]
gi|317110969|gb|ADU93461.1| putative signal transduction protein with CBS domains [Geobacillus
sp. Y412MC52]
Length = 141
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D +Y+ M NVGA+ +V G + G+IT+RD I+V+G + K ST
Sbjct: 14 YCTPLDNLYEVAVKMRDFNVGAIPIVDDGR---LVGMITDRD----IVVRGMAEKRPGST 66
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
V ++M+ + L+T+SPD V +A +M H +
Sbjct: 67 AVTEVMSRD--LVTLSPDDSVQKAADMMARHQI 97
>gi|156937882|ref|YP_001435678.1| signal-transduction protein [Ignicoccus hospitalis KIN4/I]
gi|156566866|gb|ABU82271.1| putative signal-transduction protein with CBS domains [Ignicoccus
hospitalis KIN4/I]
Length = 143
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 54/84 (64%), Gaps = 6/84 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
++T+ +A K M VG+LVVV E+ V GIITERD +R + +G+ + V ++MT
Sbjct: 20 NNTLREAAKEMMDKGVGSLVVVD--EKGDVVGIITERDVVRAV-AEGKDLNA-PVSEVMT 75
Query: 137 EENKLITVSPDTKVLRAMQLMTGH 160
+ ++TVSP+T VL+A++ M H
Sbjct: 76 PD--VLTVSPETSVLKAIETMKMH 97
>gi|305663917|ref|YP_003860205.1| putative signal transduction protein with CBS domains [Ignisphaera
aggregans DSM 17230]
gi|304378486|gb|ADM28325.1| putative signal transduction protein with CBS domains [Ignisphaera
aggregans DSM 17230]
Length = 134
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVYDA+K M +HN+ +L+V E V G+IT +D + +++ +G K+TK+ +I+++
Sbjct: 20 TVYDAIKLMERHNIASLIVTD--ENDVVLGVITAKDIVIRVLAKGLDIKTTKIIEIVSKP 77
Query: 139 NKLITVSPDTKVLRAMQLM--TGHMLLP 164
+ V PDT + + +M TGH +P
Sbjct: 78 --VTVVEPDTLLKDVVNMMIGTGHGHIP 103
>gi|383935285|ref|ZP_09988722.1| CBS domain-containing protein [Rheinheimera nanhaiensis E407-8]
gi|383703701|dbj|GAB58813.1| CBS domain-containing protein [Rheinheimera nanhaiensis E407-8]
Length = 619
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 12/128 (9%)
Query: 35 SSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGA 94
S R +S +AR E S IS +L+ + S TV+ A + MT+H V
Sbjct: 131 SERRKSTKAARQTETDLHSAQISSLLQRQPVCLPAS-------ATVWQAAQIMTEHGVSC 183
Query: 95 LVVVKPG--EQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLR 152
L+++ EQ +AGIIT+RD +++ G S+ T V IMT +T++ +
Sbjct: 184 LLILHDDDTEQGKLAGIITDRDIRSRLVAPGLKSE-TCVSTIMTANP--VTINAQQYLFE 240
Query: 153 AMQLMTGH 160
AM LM H
Sbjct: 241 AMMLMLRH 248
>gi|297530743|ref|YP_003672018.1| signal transduction protein with CBS domains [Geobacillus sp.
C56-T3]
gi|297253995|gb|ADI27441.1| putative signal transduction protein with CBS domains [Geobacillus
sp. C56-T3]
Length = 141
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D +Y+ M NVGA+ +V G + G+IT+RD I+V+G + K ST
Sbjct: 14 YCTPLDNLYEVAVKMRDFNVGAIPIVDDGR---LVGMITDRD----IVVRGMAEKRPGST 66
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
V ++M+ + L+T+SPD V +A +M H +
Sbjct: 67 AVTEVMSRD--LVTLSPDDSVQKAADMMARHQI 97
>gi|170291096|ref|YP_001737912.1| signal transduction protein [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170175176|gb|ACB08229.1| putative signal transduction protein with CBS domains [Candidatus
Korarchaeum cryptofilum OPF8]
Length = 161
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 53/83 (63%), Gaps = 7/83 (8%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIV--QGRSSKSTKVGDI 134
D TVY+A K M ++N+G++V+++ GE + GI+TERD + + I GR + KV +I
Sbjct: 32 DGTVYEAAKLMKENNIGSVVIMEEGELR---GIVTERDLITRYIAAEDGRRPEDVKVSEI 88
Query: 135 MTEENKLITVSPDTKVLRAMQLM 157
MT++ IT+ +T + A ++M
Sbjct: 89 MTKDP--ITIRDNTDIDEAARIM 109
>gi|118476396|ref|YP_893547.1| hypothetical protein BALH_0657 [Bacillus thuringiensis str. Al
Hakam]
gi|196046714|ref|ZP_03113937.1| CBS domain protein [Bacillus cereus 03BB108]
gi|225862698|ref|YP_002748076.1| CBS domain protein [Bacillus cereus 03BB102]
gi|118415621|gb|ABK84040.1| CBS domain protein [Bacillus thuringiensis str. Al Hakam]
gi|196022426|gb|EDX61110.1| CBS domain protein [Bacillus cereus 03BB108]
gi|225790017|gb|ACO30234.1| CBS domain protein [Bacillus cereus 03BB102]
Length = 139
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+VSPD + +A +LM H +
Sbjct: 66 NKITNVMT--TNIISVSPDDSIEKATELMAQHQI 97
>gi|407768617|ref|ZP_11115995.1| hypothetical protein TH3_04029 [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407288301|gb|EKF13779.1| hypothetical protein TH3_04029 [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 149
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D+V DAV MT+ +GA+++V +AGI TERD + +++ +G + ST + +MT
Sbjct: 22 DSVMDAVNMMTERKIGAVIIVD--NNARLAGIFTERDLVNRVVAKGLDAASTPLKQVMTA 79
Query: 138 ENKLITVSPDTKVLRAMQLMTGH 160
T++P + A++LM+
Sbjct: 80 NPD--TLAPGDTAMNALELMSAR 100
>gi|221309365|ref|ZP_03591212.1| hypothetical protein Bsubs1_08271 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313692|ref|ZP_03595497.1| hypothetical protein BsubsN3_08207 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318614|ref|ZP_03599908.1| hypothetical protein BsubsJ_08141 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322888|ref|ZP_03604182.1| hypothetical protein BsubsS_08252 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|2339998|emb|CAB11348.1| YlbB protein [Bacillus subtilis subsp. subtilis str. 168]
Length = 150
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY-LRKIIVQGRSSKSTKV 131
+CT D VY+A M NVGA+ VV + +++ GI+T+RD LR I + + S K+
Sbjct: 14 YCTVLDNVYEAAVKMKDANVGAIPVVDE-DGETLVGIVTDRDLVLRGIAI--KKPNSQKI 70
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D MTE K ++V D V + LM H L
Sbjct: 71 TDAMTE--KPVSVEEDASVDEVLHLMASHQL 99
>gi|52144591|ref|YP_082236.1| hypothetical protein BCZK0631 [Bacillus cereus E33L]
gi|51978060|gb|AAU19610.1| CBS domain protein [Bacillus cereus E33L]
Length = 139
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+VSPD + +A +LM H +
Sbjct: 66 NKITNVMT--TNIISVSPDDSIEKATELMAQHQI 97
>gi|187924745|ref|YP_001896387.1| hypothetical protein Bphyt_2769 [Burkholderia phytofirmans PsJN]
gi|187715939|gb|ACD17163.1| CBS domain containing protein [Burkholderia phytofirmans PsJN]
Length = 153
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 61/105 (58%), Gaps = 9/105 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D T++DAV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTTLHDAVNAMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
+ + G S ++ + +M ++ +T +P+T V ++M H
Sbjct: 56 MLTLSKNGGSVGTSTIRKVM--DDHPLTCTPETDVNEVRRMMLEH 98
>gi|49480286|ref|YP_034976.1| hypothetical protein BT9727_0631 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|196036615|ref|ZP_03104009.1| CBS domain protein [Bacillus cereus W]
gi|196042341|ref|ZP_03109614.1| CBS domain protein [Bacillus cereus NVH0597-99]
gi|228913410|ref|ZP_04077041.1| CBS domain protein [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228925908|ref|ZP_04088989.1| CBS domain protein [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228932152|ref|ZP_04095038.1| CBS domain protein [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|229089785|ref|ZP_04221040.1| CBS domain protein [Bacillus cereus Rock3-42]
gi|301052366|ref|YP_003790577.1| hypothetical protein BACI_c07500 [Bacillus cereus biovar anthracis
str. CI]
gi|376264684|ref|YP_005117396.1| hypothetical protein bcf_03800 [Bacillus cereus F837/76]
gi|423553432|ref|ZP_17529759.1| hypothetical protein IGW_04063 [Bacillus cereus ISP3191]
gi|49331842|gb|AAT62488.1| CBS domain protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|195990815|gb|EDX54789.1| CBS domain protein [Bacillus cereus W]
gi|196026822|gb|EDX65456.1| CBS domain protein [Bacillus cereus NVH0597-99]
gi|228693410|gb|EEL47116.1| CBS domain protein [Bacillus cereus Rock3-42]
gi|228827448|gb|EEM73196.1| CBS domain protein [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228833620|gb|EEM79176.1| CBS domain protein [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228846161|gb|EEM91182.1| CBS domain protein [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|300374535|gb|ADK03439.1| CBS domain protein [Bacillus cereus biovar anthracis str. CI]
gi|364510484|gb|AEW53883.1| Hypothetical protein, CBS domain protein [Bacillus cereus F837/76]
gi|401184253|gb|EJQ91360.1| hypothetical protein IGW_04063 [Bacillus cereus ISP3191]
Length = 139
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+VSPD + +A +LM H +
Sbjct: 66 NKITNVMT--TNIISVSPDDSIEKATELMAQHQI 97
>gi|440744999|ref|ZP_20924299.1| hypothetical protein A988_16363 [Pseudomonas syringae BRIP39023]
gi|440373615|gb|ELQ10373.1| hypothetical protein A988_16363 [Pseudomonas syringae BRIP39023]
Length = 146
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + N+GAL E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLDALRLMAEKNIGAL---PVVEGNEVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+K+ITV V M +MT
Sbjct: 81 --SKVITVDSQRSVEACMSIMT 100
>gi|357021739|ref|ZP_09083970.1| signal-transduction protein [Mycobacterium thermoresistibile ATCC
19527]
gi|356479487|gb|EHI12624.1| signal-transduction protein [Mycobacterium thermoresistibile ATCC
19527]
Length = 132
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
M HNVGA+VVV+P +AG+++ERD +RK+ +G + V +IMT + ++T SP
Sbjct: 17 MATHNVGAMVVVRPDGSGGIAGMVSERDVVRKLHQRGANLLDQPVSEIMT--SLVVTCSP 74
Query: 147 DTKVLRAMQLMT 158
D V +MT
Sbjct: 75 DDAVDDLAAMMT 86
>gi|415886441|ref|ZP_11548221.1| inosine-5'-monophosphate dehydrogenase related protein [Bacillus
methanolicus MGA3]
gi|387587128|gb|EIJ79451.1| inosine-5'-monophosphate dehydrogenase related protein [Bacillus
methanolicus MGA3]
Length = 143
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C+ D VY+ M + NVGA+ VV G+ + G++T+RD + + I + + S+KV D
Sbjct: 15 CSLLDNVYEVAVKMKELNVGAIPVVDNGK---LVGMVTDRDIVIRCIAE-KYPPSSKVED 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGHML 162
IM+ ++LITV+PD A QLM + +
Sbjct: 71 IMS--HQLITVTPDASTREAAQLMARNQI 97
>gi|254560087|ref|YP_003067182.1| hypothetical protein METDI1604 [Methylobacterium extorquens DM4]
gi|254267365|emb|CAX23200.1| conserved hypothetical protein with 2 CBS domains [Methylobacterium
extorquens DM4]
Length = 143
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ IL KG S + DD + DA+ +T++ +GALVV+ GE ++V GII+ERD
Sbjct: 2 TVAHILAEKGS----SVVTVRPDDPLADAIHLLTENGIGALVVM--GEARTVVGIISERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ + G ++ V MT K++T +T M+LMT
Sbjct: 56 IMHALAAHGATALDLPVSRQMT--RKVVTCRRETTNDEVMRLMT 97
>gi|118431018|ref|NP_147193.2| hypothetical protein APE_0383.1 [Aeropyrum pernix K1]
gi|116062345|dbj|BAA79338.2| conserved hypothetical protein [Aeropyrum pernix K1]
Length = 158
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 48 EHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVA 107
E G++ + DI+ + + L T+ V +A K M ++ VG+L+VV E+ ++
Sbjct: 4 EEGYDDVLVRDIMSSPPI----TTLPMTS---VKEAAKIMLENRVGSLIVV--NERNTLL 54
Query: 108 GIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
GI+T+ D +R+++ +G +S +VGDIMT + D V RA LM H
Sbjct: 55 GILTKTDIIREVVAKGLDPESVRVGDIMTRNPYYVYT--DDSVERAASLMGEH 105
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
+ TDD+V A M +HN+G L V+ P +K V GI+T+ D ++
Sbjct: 88 YVYTDDSVERAASLMGEHNIGHLPVLDPETEKPV-GIVTKTDIVK 131
>gi|442806120|ref|YP_007374269.1| cystathionine beta-synthase domain-containing protein [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442741970|gb|AGC69659.1| cystathionine beta-synthase domain-containing protein [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 149
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
S + + D T+ + + M +HNVGA+ VV +Q + GI+T+RD + + I G+ ST
Sbjct: 10 SVVTVSPDTTIKEVAELMQKHNVGAIPVV---DQSGLKGIVTDRDLVVRNIASGKDPFST 66
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLM 157
V +IMT +++ TVSPD V ++M
Sbjct: 67 PVREIMT--SQVATVSPDDDVQSVTKIM 92
>gi|365157699|ref|ZP_09353948.1| hypothetical protein HMPREF1015_00108 [Bacillus smithii 7_3_47FAA]
gi|363622925|gb|EHL74065.1| hypothetical protein HMPREF1015_00108 [Bacillus smithii 7_3_47FAA]
Length = 138
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C++ D++ M Q N+GAL VV+ G+ V G+IT+RD + + ++K+ V
Sbjct: 14 CSSQDSLQTVASKMKQLNIGALPVVENGQ---VTGMITDRDVTIRAVADDNANKN--VEQ 68
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
+MT + +++VSPD V A QLM H + LP
Sbjct: 69 VMT--HNVVSVSPDASVEEAAQLMAQHQIRRLP 99
>gi|121604049|ref|YP_981378.1| signal-transduction protein [Polaromonas naphthalenivorans CJ2]
gi|120593018|gb|ABM36457.1| putative signal-transduction protein with CBS domains [Polaromonas
naphthalenivorans CJ2]
Length = 150
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T A + M +H+VGAL+VV E+ GI+T+RD + ++ +G + GDIM+ E
Sbjct: 21 TALAAAQLMRKHHVGALIVVDALEKSRPLGIVTDRDLVLALMAEGLDPEVFTAGDIMSVE 80
Query: 139 NKLITVSPDTKVLRAMQLM 157
L+ SP+ + A+QLM
Sbjct: 81 --LVVASPEMDAMDAVQLM 97
>gi|443632839|ref|ZP_21117018.1| putative oxidoreductase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|443347662|gb|ELS61720.1| putative oxidoreductase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 148
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY-LRKIIVQGRSSKSTKV 131
+CT D VY+A M NVGA+ +V + +++ GI+T+RD LR I + + S K+
Sbjct: 14 YCTVLDNVYEAAVKMKDANVGAIPIVDE-DGETLVGIVTDRDLVLRGIAI--KKPNSQKI 70
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D MTE K ++V D V + LM H L
Sbjct: 71 TDAMTE--KPVSVEEDASVDEVLHLMASHQL 99
>gi|91784441|ref|YP_559647.1| hypothetical protein Bxe_A1358 [Burkholderia xenovorans LB400]
gi|385208771|ref|ZP_10035639.1| CBS domain-containing protein [Burkholderia sp. Ch1-1]
gi|91688395|gb|ABE31595.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
gi|385181109|gb|EIF30385.1| CBS domain-containing protein [Burkholderia sp. Ch1-1]
Length = 153
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 61/105 (58%), Gaps = 9/105 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D T++DAV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTTLHDAVNTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
+ + G S ++ + +M ++ +T +P+T V ++M H
Sbjct: 56 ILTLSKNGGSVGTSTIRKVM--DDHPLTCTPETDVNEVRRMMLEH 98
>gi|302186319|ref|ZP_07262992.1| CBS [Pseudomonas syringae pv. syringae 642]
Length = 146
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA+K M + N+GAL E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLDALKLMAEKNIGAL---PVVEGSVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+K+ITV V M +MT
Sbjct: 81 --SKVITVDSQRSVDACMGIMT 100
>gi|212224081|ref|YP_002307317.1| hypothetical protein TON_0932 [Thermococcus onnurineus NA1]
gi|212009038|gb|ACJ16420.1| hypothetical protein, conserved [Thermococcus onnurineus NA1]
Length = 181
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDTV+ + ++++ VG+ VVVK E + GIIT+RD L K++ +GR K KV ++MT
Sbjct: 21 DDTVHRIARILSRNKVGSAVVVKDDE---IVGIITDRDILDKVVAKGRDPKDVKVEEVMT 77
Query: 137 EENKLITVSPDTKVLRAMQLM 157
+ +T+ D +V A+ M
Sbjct: 78 KNP--VTIEDDYEVQDAIDRM 96
>gi|58581433|ref|YP_200449.1| hypothetical protein XOO1810 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84623368|ref|YP_450740.1| hypothetical protein XOO_1711 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188577328|ref|YP_001914257.1| hypothetical protein PXO_01671 [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|58426027|gb|AAW75064.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84367308|dbj|BAE68466.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188521780|gb|ACD59725.1| CBS domain protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 104
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 106 VAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ GI++ER Y RK++++ RSS +T V +IM+ E ++TVSP V R MQLMT
Sbjct: 9 LVGIVSERHYARKVVLRDRSSSTTSVAEIMSAE--VVTVSPSDTVERCMQLMT 59
>gi|423577433|ref|ZP_17553552.1| hypothetical protein II9_04654 [Bacillus cereus MSX-D12]
gi|401204765|gb|EJR11577.1| hypothetical protein II9_04654 [Bacillus cereus MSX-D12]
Length = 139
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 56/94 (59%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT+ +++VSPD + +A +LM H +
Sbjct: 66 NKITNVMTK--NIVSVSPDDPIEKATELMAQHQI 97
>gi|212639686|ref|YP_002316206.1| hypothetical protein Aflv_1860 [Anoxybacillus flavithermus WK1]
gi|212561166|gb|ACJ34221.1| CBS domain protein [Anoxybacillus flavithermus WK1]
Length = 140
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
CT D +Y+A M +NVGA+ + + + GI+T+RD + + I + + ST V
Sbjct: 16 CCTPLDNMYEAAVKMRDYNVGAIPIT---DGNRLIGIVTDRDLVIRGIAE-KKPGSTAVT 71
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTGHML 162
++M+E +L+T+SPD V A +LM H +
Sbjct: 72 EVMSE--QLVTISPDASVEEATRLMAKHQI 99
>gi|170695907|ref|ZP_02887047.1| CBS domain containing protein [Burkholderia graminis C4D1M]
gi|170139205|gb|EDT07393.1| CBS domain containing protein [Burkholderia graminis C4D1M]
Length = 152
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 61/105 (58%), Gaps = 9/105 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D T++DAV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKGN----TLFTVTPDATLHDAVNTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
+ + G S ++ + +M ++ +T +P+T V ++M H
Sbjct: 56 ILTLKENGGSVGTSTIRKVM--DDHPLTCTPETDVNEVRRMMLEH 98
>gi|334341972|ref|YP_004546952.1| hypothetical protein [Desulfotomaculum ruminis DSM 2154]
gi|334093326|gb|AEG61666.1| CBS domain containing protein [Desulfotomaculum ruminis DSM 2154]
Length = 146
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D + +A + M+QHNVG++ VV+ G+ G+IT+RD +I QG +ST+V IMT
Sbjct: 19 DQSAQEAARLMSQHNVGSIPVVENGK---CVGMITDRDITLRITSQGLDPQSTQVQSIMT 75
Query: 137 EENKLITVSPDTKVLRAMQLM 157
+ ++T +P+ V +A LM
Sbjct: 76 TD--VVTGAPEMDVHQAANLM 94
>gi|328873281|gb|EGG21648.1| hypothetical protein DFA_01534 [Dictyostelium fasciculatum]
Length = 222
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 7/108 (6%)
Query: 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGII 110
F + +IL+ K D + + + +A++ M +G+++VV + + GI
Sbjct: 61 FGDKKVGEILEKK---KDNEIVTVGEHELIINAIRKMVDKKIGSILVV--NSENKLKGIF 115
Query: 111 TERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ERDYL K+ + G SS+ + V +MT+ K T+ DT L AM++MT
Sbjct: 116 SERDYLSKVNLAGLSSRESPVEQVMTKNVK--TIKSDTCTLDAMKIMT 161
>gi|327310840|ref|YP_004337737.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
gi|326947319|gb|AEA12425.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
Length = 137
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D+T+ DAV + QHN+GALVVV+ E +I+ERD +R + R + ST V M+
Sbjct: 24 DETLLDAVDRLAQHNIGALVVVRREEPDVALAVISERDVVRAL--NMRMALSTPVEAFMS 81
Query: 137 EENKLITVSPDTKVLRAMQLM 157
+I+V D + RA +LM
Sbjct: 82 --RGVISVEADEPLSRAAELM 100
>gi|301122411|ref|XP_002908932.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099694|gb|EEY57746.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 184
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV++A+K M N+G L V + GI+TERDYL+K+ +QG ++K T V IMT
Sbjct: 53 TVFEALKRMAGINLGCLAV--SSDDDKFVGILTERDYLKKVELQGLTAKDTLVKQIMTNR 110
Query: 139 NKLITVSPDTKVLRAMQLMT 158
+L TV+ + + QLMT
Sbjct: 111 ARL-TVAKENET--PSQLMT 127
>gi|433603543|ref|YP_007035912.1| hypothetical protein BN6_17170 [Saccharothrix espanaensis DSM
44229]
gi|407881396|emb|CCH29039.1| hypothetical protein BN6_17170 [Saccharothrix espanaensis DSM
44229]
Length = 142
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + D +V + V ++ +HNVGA+VVV +AGI++ERD
Sbjct: 3 IADVLRNKGS----AVATVRADASVAELVAALAEHNVGAMVVVA---DSGIAGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
+R++ +G + V DIMT E + T SP V LMT H +
Sbjct: 56 VRRLHDRGADLLAAAVADIMTAE--VFTCSPKDSVDSLTVLMTEHRI 100
>gi|403234927|ref|ZP_10913513.1| signal transduction protein with CBS domains [Bacillus sp.
10403023]
Length = 141
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D VY+ M +VGA+ ++ E K + G+IT+RD ++V+G + K S+
Sbjct: 14 YCTPLDNVYEVAVKMKDLDVGAIPIL---EDKKLIGMITDRD----LVVRGYAEKRSGSS 66
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
+V ++M+E LIT SPDT + A LM H +
Sbjct: 67 QVTNVMSE--NLITCSPDTSLEEASILMAKHQI 97
>gi|14590193|ref|NP_142258.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
horikoshii OT3]
gi|3256656|dbj|BAA29339.1| 178aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 178
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D+V+ K ++++ VG+ VV+ GE V G++TERD L K++ +G+ K KV +IMT+
Sbjct: 22 DSVHKVAKVLSKNKVGSAVVMDKGE---VLGVVTERDILDKVVAKGKDPKEVKVEEIMTK 78
Query: 138 ENKLITVSPDTKVLRAMQLMT 158
+ + D V A++LMT
Sbjct: 79 NP--VKIEYDYDVQDAIELMT 97
>gi|15668834|ref|NP_247637.1| inosine-5'-monophosphate dehydrogenase GuaB [Methanocaldococcus
jannaschii DSM 2661]
gi|2496100|sp|Q58069.1|Y653_METJA RecName: Full=Uncharacterized protein MJ0653
gi|1592300|gb|AAB98648.1| inosine-5'-monophosphate dehydrogenase (guaB) [Methanocaldococcus
jannaschii DSM 2661]
Length = 194
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 11/89 (12%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T + ++YD MT++N+GA+V+V E GI+TERD +++++ SK+ K D+
Sbjct: 21 TKNMSIYDIANIMTENNIGAVVIV---ENNKPIGIVTERDIVKRVV-----SKNLKPKDV 72
Query: 135 MTEE---NKLITVSPDTKVLRAMQLMTGH 160
+ EE K+IT+ + + A ++M H
Sbjct: 73 LAEEVMSKKIITIPQNASITEAAKIMATH 101
>gi|229183053|ref|ZP_04310283.1| CBS domain protein [Bacillus cereus BGSC 6E1]
gi|228600192|gb|EEK57782.1| CBS domain protein [Bacillus cereus BGSC 6E1]
Length = 139
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +++VSPD + +A +LM H +
Sbjct: 66 NKITNVMT--TNIVSVSPDDSIEKATELMAQHQI 97
>gi|114770297|ref|ZP_01447835.1| inosine-5'-monophosphate dehydrogenase (guaB) [Rhodobacterales
bacterium HTCC2255]
gi|114549134|gb|EAU52017.1| inosine-5'-monophosphate dehydrogenase (guaB) [alpha
proteobacterium HTCC2255]
Length = 180
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+ D V+DAV +M++ N G++VVV +K V G++TERD + K++ + + K T + I
Sbjct: 28 SPDTNVFDAVNAMSKKNYGSVVVV--DTEKKVIGVVTERDIMNKVVGKELNPKETLLSSI 85
Query: 135 MTEENKLITVSPDTKVLRAMQLMTGH 160
MTE KL + D +L +++M+
Sbjct: 86 MTENPKLARETDD--MLEWLRIMSNE 109
>gi|393722761|ref|ZP_10342688.1| signal-transduction protein [Sphingomonas sp. PAMC 26605]
Length = 142
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI+ IL +KG+ + T +V DAV + + VGA+ V+ E +V GI +ERD
Sbjct: 2 TIAAILSSKGR----EVVSITAKQSVGDAVALLAERRVGAVPVM---EGDAVVGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ I G + + V + MT ITV+PD V+ A+ LMT
Sbjct: 55 VIHAIAAHGGDAMTRSVAETMTAPP--ITVAPDEAVIGALSLMT 96
>gi|422640856|ref|ZP_16704281.1| CBS domain-containing protein [Pseudomonas syringae Cit 7]
gi|330953245|gb|EGH53505.1| CBS domain-containing protein [Pseudomonas syringae Cit 7]
Length = 146
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + N+GAL E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLDALRLMAEKNIGAL---PVVEGNEVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+K+ITV V M +MT
Sbjct: 81 --SKVITVDSQRSVEACMGIMT 100
>gi|46200944|ref|ZP_00056074.2| COG0517: FOG: CBS domain [Magnetospirillum magnetotacticum MS-1]
Length = 146
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
ILK+K +G G + T D ++ DA + + QH +GA V+V G++ VAGI++ERD +R
Sbjct: 6 ILKSKARG--GGIVSVTPDASIGDAARLLAQHKIGA-VLVMTGDR--VAGILSERDIVRG 60
Query: 119 IIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTG 159
+ + KV D+MT E + D V R M++MT
Sbjct: 61 LADAMDVCVTAKVRDLMTAE--VFVCHEDDTVERLMEIMTA 99
>gi|259418480|ref|ZP_05742398.1| CBS domain protein [Silicibacter sp. TrichCH4B]
gi|259345875|gb|EEW57719.1| CBS domain protein [Silicibacter sp. TrichCH4B]
Length = 174
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ D+L K G W DTV AV+ + +GAL+V P Q + GI++ERD
Sbjct: 34 TVGDVLANKS----GDLFWINPQDTVAKAVEVLRDKGIGALLVKNP--QGELVGILSERD 87
Query: 115 YLRKII-VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R++ G + T G + T+ +IT +PD V+ ++LMT
Sbjct: 88 IVRRLADTPGETLPQTVEGLMSTD---VITATPDQSVVEVLRLMT 129
>gi|171060349|ref|YP_001792698.1| signal-transduction protein [Leptothrix cholodnii SP-6]
gi|170777794|gb|ACB35933.1| putative signal-transduction protein with CBS domains [Leptothrix
cholodnii SP-6]
Length = 150
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 83 AVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLI 142
A + M +H+VGALVVV EQ GI+T+RD + ++ +G VGDIM+ + L+
Sbjct: 25 AAQLMRKHHVGALVVVDAAEQTRPVGIVTDRDLVLGLMAEGLDPALFTVGDIMSTD--LV 82
Query: 143 TVSPDTKVLRAMQLM 157
P+ L A+ LM
Sbjct: 83 LARPEMDALDAVALM 97
>gi|410458308|ref|ZP_11312068.1| CBS domain-containing protein [Bacillus azotoformans LMG 9581]
gi|409931490|gb|EKN68472.1| CBS domain-containing protein [Bacillus azotoformans LMG 9581]
Length = 140
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+CT D ++ M NVGA+ +V+ G ++ G+IT+RD + + I + RS S V
Sbjct: 14 YCTPVDNAFEVATKMKDLNVGAIPIVENG---NLLGMITDRDLVVRGIAEKRSG-SNAVT 69
Query: 133 DIMTEENKLITVSPDTKVLRAMQLM 157
++M++E LITVSP + V A Q+M
Sbjct: 70 NLMSQE--LITVSPTSSVHEAAQIM 92
>gi|392381228|ref|YP_005030425.1| conserved protein of unknown function; cystathionine beta synthase
domain [Azospirillum brasilense Sp245]
gi|356876193|emb|CCC96950.1| conserved protein of unknown function; cystathionine beta synthase
domain [Azospirillum brasilense Sp245]
Length = 161
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 68 DGSWLWCTTDDTVYDAVKSMTQHNVGALVVV--KPGEQKSVAGIITERDYLRKIIVQGRS 125
D + + +V DA M + V AL+V +P +S+ GI TERD +++ GR
Sbjct: 13 DQQLVCLPPEASVRDAAVLMAERRVAALLVTQDRPKGGRSLKGIFTERDLAARVVAAGRD 72
Query: 126 SKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
+T++ ++MT T+ PD A+ LM H
Sbjct: 73 PATTRLAEVMTASPD--TLGPDAHAYEALDLMERH 105
>gi|389851632|ref|YP_006353866.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
sp. ST04]
gi|388248938|gb|AFK21791.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
sp. ST04]
Length = 178
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDTV+ + ++++ VG+ VV+ E+ + GIITERD L K++ +G+ + +V +IMT
Sbjct: 21 DDTVHKVARVLSRNKVGSAVVM---EKDEILGIITERDILDKVVAKGKDPRQVRVREIMT 77
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
++ I + D V A+++MT
Sbjct: 78 KDP--IKIEYDYDVQDAIEVMT 97
>gi|398310597|ref|ZP_10514071.1| putative oxidoreductase [Bacillus mojavensis RO-H-1]
Length = 148
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T I D++ A +CT D VY+A M +VGA+ VV + +++ GI+T+R
Sbjct: 2 TKIKDLMTA-------DLQYCTVLDNVYEAAVKMKDADVGAIPVVDE-DGETLVGIVTDR 53
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D + + I R + S K+ D MTE K ++V D V + LM H L
Sbjct: 54 DLVLRGIASKRPN-SQKITDAMTE--KPVSVEEDAPVDEVLHLMASHQL 99
>gi|295680850|ref|YP_003609424.1| hypothetical protein BC1002_6046 [Burkholderia sp. CCGE1002]
gi|295440745|gb|ADG19913.1| CBS domain containing membrane protein [Burkholderia sp. CCGE1002]
Length = 155
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDTV A++ M +V ++V+ + ++ G++++RDY RK+ V GR++ ST+VGDIMT
Sbjct: 25 DDTVLSALQLMADKDVTTVLVL---QSSNLVGVLSQRDYARKVDVLGRNAASTRVGDIMT 81
Query: 137 EENKLITVSPD 147
++ V+P+
Sbjct: 82 --TQVFYVTPE 90
>gi|163793432|ref|ZP_02187407.1| Predicted signal-transduction protein containing CBS domains [alpha
proteobacterium BAL199]
gi|159181234|gb|EDP65749.1| Predicted signal-transduction protein containing CBS domains [alpha
proteobacterium BAL199]
Length = 142
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 12/113 (10%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T I D ++A+ + + T D+V V+ MT+ +GA+ VV G ++ GI TER
Sbjct: 4 TIIPDAIRAQ------TLVTVTPSDSVRATVRLMTERRIGAVPVV--GPDGALVGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT--GHMLLP 164
D + +++ + +T VG +MT K T +PD +L+A++ M G+ LP
Sbjct: 56 DVMCRVVDRDLDPATTPVGQVMTASPK--TATPDWPILKALEHMADGGYRHLP 106
>gi|347524337|ref|YP_004781907.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
gi|343461219|gb|AEM39655.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
Length = 152
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
T D+ V +A + M Q+ +G++VVV ++ V GIITERD + +++ + R T V +
Sbjct: 20 ITPDEPVIEAARKMKQYEIGSVVVV--SQRGEVIGIITERDLVTRVVAENRDPLKTTVRE 77
Query: 134 IMTEENKLITVSPDTKVLRAMQLMT----GHM 161
+MT ITV DT + A +LM+ GH+
Sbjct: 78 VMTPNP--ITVYDDTPLEIAARLMSERGVGHL 107
>gi|375099615|ref|ZP_09745878.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora cyanea NA-134]
gi|374660347|gb|EHR60225.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora cyanea NA-134]
Length = 138
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ T +TV A ++M VGAL + GE + G++T+RD + K++ +G+ + VG
Sbjct: 14 YAETSETVTHAARTMAGEGVGALPI--RGEDHKLKGMLTDRDIVVKVLAEGKDPVAVHVG 71
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTGHML 162
++ + +++ V PD V A++LM H +
Sbjct: 72 ELA--QGEVVAVGPDDDVAEALRLMARHQV 99
>gi|386847341|ref|YP_006265354.1| Inosine-5'-monophosphate dehydrogenase [Actinoplanes sp. SE50/110]
gi|359834845|gb|AEV83286.1| Inosine-5'-monophosphate dehydrogenase [Actinoplanes sp. SE50/110]
Length = 145
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISDIL+ KG G + D +V + + H +GA +V + G +VAGI++ERD
Sbjct: 3 ISDILRVKGTGV----VTVPPDLSVEGLIAKLAHHRIGAAIVSRDG--TAVAGIVSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R + G S + V I T + + TVSPD ++ +LMT
Sbjct: 57 VRALASHGPSVLTDPVSSIQTTQVR--TVSPDAQLEDVERLMT 97
>gi|375096369|ref|ZP_09742634.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora marina XMU15]
gi|374657102|gb|EHR51935.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora marina XMU15]
Length = 147
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 10/104 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
I+D+L+ KG S + T T V + + + +HNVGALVVV +VAGI++ERD
Sbjct: 3 IADLLRRKG-----SMVATVTPRTRVSELLARLAEHNVGALVVVDGA--GAVAGIVSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R++ G S +VGDIMT + T P V LMT
Sbjct: 56 VVRRLHQHGPDLLSREVGDIMT--TVVATCGPQDSVDELSALMT 97
>gi|228944471|ref|ZP_04106842.1| CBS domain protein [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228815139|gb|EEM61389.1| CBS domain protein [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
Length = 139
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+V+PD + +A +LM H +
Sbjct: 66 NKITNVMT--TNIISVAPDDSIEKATELMAQHQI 97
>gi|403380207|ref|ZP_10922264.1| CBS domain-containing protein [Paenibacillus sp. JC66]
Length = 143
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+C+ +D+V A + M + G+L + E K+V GIIT+RD + ++ G+ S S
Sbjct: 14 FCSPNDSVATAAQKMRNIDCGSLPIC---EGKTVVGIITDRDIVLNVVADGKDSTSVTCQ 70
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTGHML 162
+ MT +I+ SPDT V ++M + +
Sbjct: 71 ECMT--TSVISCSPDTDVHECARMMAENQI 98
>gi|229143445|ref|ZP_04271871.1| CBS domain protein [Bacillus cereus BDRD-ST24]
gi|228639947|gb|EEK96351.1| CBS domain protein [Bacillus cereus BDRD-ST24]
Length = 147
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 21 VHCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 73
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ +IMT +I+VSP+ + +A +LM H +
Sbjct: 74 NKITNIMT--TNIISVSPNDSIEKATELMAQHQI 105
>gi|240103611|ref|YP_002959920.1| hypothetical protein TGAM_1554 [Thermococcus gammatolerans EJ3]
gi|239911165|gb|ACS34056.1| Conserved hypothetical protein, containing CBS domains
[Thermococcus gammatolerans EJ3]
Length = 176
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDTV+ K + ++ VG+ VVV E + G++T+RD L K++ +G+ K KV DIMT
Sbjct: 20 DDTVHKVAKILARNRVGSAVVV---ENDEIVGVVTDRDILDKVVAKGKDPKKVKVRDIMT 76
Query: 137 EENKLITVSPDTKVLRAMQLM 157
+ +T+ D + A+ M
Sbjct: 77 QNP--VTIEDDYSISDAIDRM 95
>gi|378776683|ref|YP_005185120.1| hypothetical protein lp12_0750 [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|364507497|gb|AEW51021.1| hypothetical protein lp12_0750 [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 164
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ DD+V + +K M + ++GALVV + GI++ERD LR + S ++ KV
Sbjct: 38 YIHPDDSVKECIKQMVEKDIGALVVF--DNDAHLIGIVSERDILRCYFHKNLSLETAKVS 95
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMT 158
D++ N + +SP V +AMQ++T
Sbjct: 96 DVVY--NNVTILSPHDSVEKAMQVIT 119
>gi|54293724|ref|YP_126139.1| hypothetical protein lpl0777 [Legionella pneumophila str. Lens]
gi|296106328|ref|YP_003618028.1| hypothetical protein lpa_01144 [Legionella pneumophila 2300/99
Alcoy]
gi|397663308|ref|YP_006504846.1| hypothetical protein LPO_0821 [Legionella pneumophila subsp.
pneumophila]
gi|397666421|ref|YP_006507958.1| hypothetical protein LPV_0865 [Legionella pneumophila subsp.
pneumophila]
gi|53753556|emb|CAH15011.1| hypothetical protein lpl0777 [Legionella pneumophila str. Lens]
gi|295648229|gb|ADG24076.1| hypothetical protein lpa_01144 [Legionella pneumophila 2300/99
Alcoy]
gi|395126719|emb|CCD04902.1| conserved hypothetical protein, CBS domain [Legionella pneumophila
subsp. pneumophila]
gi|395129832|emb|CCD08065.1| conserved hypothetical protein, CBS domain [Legionella pneumophila
subsp. pneumophila]
Length = 144
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ DD+V + +K M + ++GALVV + GI++ERD LR + S ++ KV
Sbjct: 18 YIHPDDSVKECIKQMVEKDIGALVVF--DNDAHLIGIVSERDILRCYFHKNLSLETAKVS 75
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMT 158
D++ N + +SP V +AMQ++T
Sbjct: 76 DVVY--NNVTILSPHDSVEKAMQVIT 99
>gi|374606945|ref|ZP_09679759.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus
dendritiformis C454]
gi|374387450|gb|EHQ58958.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus
dendritiformis C454]
Length = 142
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
S + CT D +Y+A M +H+ G + +V GE+ + G++T+RD + + + + + ST
Sbjct: 11 SIVTCTAQDNIYEAAVKMKEHDTGFIPIVD-GER--LIGVLTDRDLVIRAMAE-KHPGST 66
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
V D+MTEE +I+V P+ + +LM H +
Sbjct: 67 SVRDVMTEE--VISVGPEATIDETAELMADHQV 97
>gi|228951220|ref|ZP_04113332.1| CBS domain protein [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|229078031|ref|ZP_04210639.1| CBS domain protein [Bacillus cereus Rock4-2]
gi|228705270|gb|EEL57648.1| CBS domain protein [Bacillus cereus Rock4-2]
gi|228808418|gb|EEM54925.1| CBS domain protein [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 132
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 6 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 58
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+VSP+ + +A +LM H +
Sbjct: 59 NKITNVMT--TNIISVSPNDSIEKATELMAQHQI 90
>gi|452752736|ref|ZP_21952477.1| CBS domain protein [alpha proteobacterium JLT2015]
gi|451960127|gb|EMD82542.1| CBS domain protein [alpha proteobacterium JLT2015]
Length = 118
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 51/75 (68%), Gaps = 5/75 (6%)
Query: 84 VKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLIT 143
++++ +H +GA++V++ G+Q +AG+++ERD +R + QG ++ S D+MT + ++T
Sbjct: 3 IETLVEHRIGAVLVLE-GDQ--IAGVLSERDIVRCLAEQGEAALSKCASDLMTAD--VVT 57
Query: 144 VSPDTKVLRAMQLMT 158
V+PD V AM MT
Sbjct: 58 VAPDESVYEAMSNMT 72
>gi|296501469|ref|YP_003663169.1| inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
BMB171]
gi|296322521|gb|ADH05449.1| inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
BMB171]
Length = 139
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ +IMT +I+VSP+ + +A +LM H +
Sbjct: 66 NKITNIMT--TNIISVSPNDSIEKATELMAQHQI 97
>gi|229177250|ref|ZP_04304634.1| CBS domain protein [Bacillus cereus 172560W]
gi|229188928|ref|ZP_04315958.1| CBS domain protein [Bacillus cereus ATCC 10876]
gi|228594531|gb|EEK52320.1| CBS domain protein [Bacillus cereus ATCC 10876]
gi|228606129|gb|EEK63566.1| CBS domain protein [Bacillus cereus 172560W]
Length = 132
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 6 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 58
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+VSP+ + +A +LM H +
Sbjct: 59 NKITNVMT--TNIISVSPNDSIEKATELMAQHQI 90
>gi|440719396|ref|ZP_20899825.1| hypothetical protein A979_01330 [Pseudomonas syringae BRIP34876]
gi|440725046|ref|ZP_20905318.1| hypothetical protein A987_03363 [Pseudomonas syringae BRIP34881]
gi|440368228|gb|ELQ05273.1| hypothetical protein A979_01330 [Pseudomonas syringae BRIP34876]
gi|440369031|gb|ELQ06025.1| hypothetical protein A987_03363 [Pseudomonas syringae BRIP34881]
Length = 146
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + N+GAL VV+ V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLEALKLMAEKNIGALPVVE---GNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+K+ITV V M +MT
Sbjct: 81 --SKVITVDSQRSVEACMGIMT 100
>gi|229149060|ref|ZP_04277301.1| CBS domain protein [Bacillus cereus m1550]
gi|228634259|gb|EEK90847.1| CBS domain protein [Bacillus cereus m1550]
Length = 147
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 21 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 73
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+VSP+ + +A +LM H +
Sbjct: 74 NKITNVMT--TNIISVSPNDSIEKATELMAQHQI 105
>gi|422595667|ref|ZP_16669953.1| CBS domain-containing protein [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|330985970|gb|EGH84073.1| CBS domain-containing protein [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 146
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + N+GAL E V G+++ERDY RK+I++GRSS T V +IM+
Sbjct: 24 DQMVLDALRLMAEKNIGAL---PVVEGNVVVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
NK+ITV V M +MT
Sbjct: 81 --NKVITVDSQQSVEACMGIMT 100
>gi|82702298|ref|YP_411864.1| signal-transduction protein [Nitrosospira multiformis ATCC 25196]
gi|82410363|gb|ABB74472.1| putative signal-transduction protein with CBS domains [Nitrosospira
multiformis ATCC 25196]
Length = 149
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSV-AGIITERDYLRKIIVQGRSSKSTKVGDIM 135
D+T+ +A K M QH+VG +VV++ + ++ GI+T+RD + +I+ G + VGDIM
Sbjct: 17 DETIGEAAKLMRQHHVGDVVVIEERDGLNIPVGIVTDRDLVVEIMATGLDAVVITVGDIM 76
Query: 136 TEENKLITVSPDTKVLRAMQLM 157
E +L+TV V A+Q M
Sbjct: 77 --EQELVTVKESVGVFEAIQYM 96
>gi|334337368|ref|YP_004542520.1| signal transduction protein with CBS domains [Isoptericola
variabilis 225]
gi|334107736|gb|AEG44626.1| putative signal transduction protein with CBS domains [Isoptericola
variabilis 225]
Length = 147
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ D L+ KG + + D TV D + + +H +GA+VV G SV GI++ERD
Sbjct: 3 VRDTLRHKGD----AVVTVARDRTVRDLLALLAEHGIGAVVVSDDG--ASVDGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
+R++ +G V IMT + + T PDT + M +MT H
Sbjct: 57 VRRLHAEGVGVLDAAVEQIMTRDVQ--TCDPDTMLDDLMHMMTEH 99
>gi|443644060|ref|ZP_21127910.1| CBS domain protein [Pseudomonas syringae pv. syringae B64]
gi|443284077|gb|ELS43082.1| CBS domain protein [Pseudomonas syringae pv. syringae B64]
Length = 146
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + N+GAL E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLEALKLMAEKNIGAL---PVVEGNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+K+ITV V M +MT
Sbjct: 81 --SKVITVDSQRSVEACMGIMT 100
>gi|393773610|ref|ZP_10362005.1| hypothetical protein WSK_3002 [Novosphingobium sp. Rr 2-17]
gi|392720913|gb|EIZ78383.1| hypothetical protein WSK_3002 [Novosphingobium sp. Rr 2-17]
Length = 141
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 10/104 (9%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI I++ +G + C TV +A + +GAL V + G+ +AGI +ERD
Sbjct: 2 TIGRIIQGRG-----PVVTCDASATVREAADLLADRRIGALPVTQHGQ---IAGIFSERD 53
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ ++ G +GD+MT +TV PDT V+ A+ LMT
Sbjct: 54 VIYRLRQFGADVLDMPIGDVMTTPP--VTVDPDTSVMAALSLMT 95
>gi|296284851|ref|ZP_06862849.1| hypothetical protein CbatJ_14581 [Citromicrobium bathyomarinum
JL354]
Length = 143
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C T + DAV + + +GAL V+ G+ VAGI +ERD + + QG S VG+
Sbjct: 18 CQTQTPMRDAVTLLAEKRIGALPVMDGGK---VAGIFSERDVIYCMAAQGPSCLERPVGE 74
Query: 134 IMTEENKLITVSPDTKVLRAMQLMT 158
+MT + ITV+ D K+ +A+ LMT
Sbjct: 75 VMT--SPAITVTRDQKIDQALALMT 97
>gi|416016195|ref|ZP_11563578.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. B076]
gi|416027429|ref|ZP_11570676.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
gi|422407300|ref|ZP_16484299.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
gi|320324479|gb|EFW80556.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. B076]
gi|320328400|gb|EFW84403.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330882511|gb|EGH16660.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 146
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + N+GAL E V G+++ERDY RK+I++GRSS T V +IM+
Sbjct: 24 DQMVLDALRLMAEKNIGAL---PVVEGNVVVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
NK+ITV V M +MT
Sbjct: 81 --NKVITVDSQQSVEACMGIMT 100
>gi|218235447|ref|YP_002365515.1| hypothetical protein BCB4264_A0776 [Bacillus cereus B4264]
gi|423422885|ref|ZP_17399916.1| hypothetical protein IE5_00574 [Bacillus cereus BAG3X2-2]
gi|423434327|ref|ZP_17411308.1| hypothetical protein IE9_00508 [Bacillus cereus BAG4X12-1]
gi|423505667|ref|ZP_17482258.1| hypothetical protein IG1_03232 [Bacillus cereus HD73]
gi|449087514|ref|YP_007419955.1| CBS domain protein [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|218163404|gb|ACK63396.1| CBS domain protein [Bacillus cereus B4264]
gi|401117193|gb|EJQ25030.1| hypothetical protein IE5_00574 [Bacillus cereus BAG3X2-2]
gi|401126796|gb|EJQ34529.1| hypothetical protein IE9_00508 [Bacillus cereus BAG4X12-1]
gi|402452361|gb|EJV84176.1| hypothetical protein IG1_03232 [Bacillus cereus HD73]
gi|449021271|gb|AGE76434.1| CBS domain protein [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 139
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+VSP+ + +A +LM H +
Sbjct: 66 NKITNVMT--TNIISVSPNDSIEKATELMAQHQI 97
>gi|257488025|ref|ZP_05642066.1| CBS domain-containing protein [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
gi|289646587|ref|ZP_06477930.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
str. 2250]
gi|422679348|ref|ZP_16737622.1| CBS domain-containing protein [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
gi|298158422|gb|EFH99491.1| Inosine-5'-monophosphate dehydrogenase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|331008696|gb|EGH88752.1| CBS domain-containing protein [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
Length = 146
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + N+GAL E V G+++ERDY RK+I++GRSS T V +IM+
Sbjct: 24 DQMVLDALRLMAEKNIGAL---PVVEGNVVVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
NK+ITV V M +MT
Sbjct: 81 --NKVITVDSQQSVEACMGIMT 100
>gi|302525541|ref|ZP_07277883.1| signal-transduction protein [Streptomyces sp. AA4]
gi|302434436|gb|EFL06252.1| signal-transduction protein [Streptomyces sp. AA4]
Length = 143
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + TV + + + +HNVGA+VVV + +AGI++ERD
Sbjct: 3 IADVLQRKG----ATVATVSPGTTVAELLAGLARHNVGAMVVVD--AEGGIAGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+RK+ G + V DIMT + + +PD V R +MT
Sbjct: 57 VRKLNDHGPAVLEGPVADIMT--TMVASCTPDDPVDRLSVVMT 97
>gi|71735132|ref|YP_274691.1| hypothetical protein PSPPH_2494 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71555685|gb|AAZ34896.1| CBS domain protein [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 146
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + N+GAL E V G+++ERDY RK+I++GRSS T V +IM+
Sbjct: 24 DQMVLDALRLMAEKNIGAL---PVVEGNVVVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
NK+ITV V M +MT
Sbjct: 81 --NKVITVDSQQSVEACMGIMT 100
>gi|206967775|ref|ZP_03228731.1| CBS domain protein [Bacillus cereus AH1134]
gi|423415463|ref|ZP_17392583.1| hypothetical protein IE1_04767 [Bacillus cereus BAG3O-2]
gi|423428746|ref|ZP_17405750.1| hypothetical protein IE7_00562 [Bacillus cereus BAG4O-1]
gi|423579046|ref|ZP_17555157.1| hypothetical protein IIA_00561 [Bacillus cereus VD014]
gi|423638694|ref|ZP_17614346.1| hypothetical protein IK7_05102 [Bacillus cereus VD156]
gi|206736695|gb|EDZ53842.1| CBS domain protein [Bacillus cereus AH1134]
gi|401096314|gb|EJQ04363.1| hypothetical protein IE1_04767 [Bacillus cereus BAG3O-2]
gi|401124010|gb|EJQ31777.1| hypothetical protein IE7_00562 [Bacillus cereus BAG4O-1]
gi|401219069|gb|EJR25731.1| hypothetical protein IIA_00561 [Bacillus cereus VD014]
gi|401269696|gb|EJR75723.1| hypothetical protein IK7_05102 [Bacillus cereus VD156]
Length = 139
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+VSP+ + +A +LM H +
Sbjct: 66 NKITNVMT--TNIISVSPNDSIEKATELMAQHQI 97
>gi|422620669|ref|ZP_16689345.1| CBS domain-containing protein [Pseudomonas syringae pv. japonica
str. M301072]
gi|330901025|gb|EGH32444.1| CBS domain-containing protein [Pseudomonas syringae pv. japonica
str. M301072]
Length = 146
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + N+GAL E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLEALKLMAEKNIGAL---PVVEGNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+K+ITV V M +MT
Sbjct: 81 --SKVITVDSQRSVEACMGIMT 100
>gi|295677060|ref|YP_003605584.1| hypothetical protein BC1002_2012 [Burkholderia sp. CCGE1002]
gi|295436903|gb|ADG16073.1| CBS domain containing protein [Burkholderia sp. CCGE1002]
Length = 155
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 61/105 (58%), Gaps = 9/105 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D T++DAV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKGN----TLFTVTPDTTLHDAVITMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
+ + G S ++ + +M ++ +T +P+T V ++M H
Sbjct: 56 ILTLKENGGSVGTSTIRKVM--DDHPLTCTPETDVNEVRRMMLEH 98
>gi|406911913|gb|EKD51615.1| signal transduction protein [uncultured bacterium]
Length = 148
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 11/106 (10%)
Query: 54 TTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
TT++ +LK KG + +W D+V AVK M Q VGAL+V+K +V G+ +E
Sbjct: 3 TTVNQLLKRKG-----NQIWSVAPTDSVDKAVKLMAQRKVGALMVMK---DNAVVGVFSE 54
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
RD R + +G S+ + V ++M+ + + V+P ++ M+ MT
Sbjct: 55 RDLARNMAHKGFSNPNIPVSEMMSRQ--VYYVNPTMTMVDCMKFMT 98
>gi|404251674|ref|ZP_10955642.1| signal-transduction protein [Sphingomonas sp. PAMC 26621]
Length = 143
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI IL KG+ + T D +V AV + + +GA+ V+ + + GI +ERD
Sbjct: 3 TIGAILGGKGR----EVVSVTADQSVRAAVALLAERRIGAVPVL---DGTRIVGIFSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ + QG + V DIMT ITV PD V+ A+ LMT
Sbjct: 56 VIYAVASQGNDALGQTVADIMTAPA--ITVGPDEAVIGALSLMT 97
>gi|228989851|ref|ZP_04149829.1| CBS domain protein [Bacillus pseudomycoides DSM 12442]
gi|228769881|gb|EEM18466.1| CBS domain protein [Bacillus pseudomycoides DSM 12442]
Length = 139
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +G + +V E V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEEAIGMIPIV---ENNQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT E +++VSPD + A +LM H +
Sbjct: 66 NKITNVMTTE--IVSVSPDDPIENATELMAQHQI 97
>gi|13541493|ref|NP_111181.1| CBS domain-containing protein [Thermoplasma volcanium GSS1]
gi|14324877|dbj|BAB59803.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 140
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D T Y+A M Q +VG L+V ++ + G++TE DY+ KII + + K+ +V +IM
Sbjct: 19 DTTAYEAAVVMAQDHVGFLIV---EDETGIRGMVTEWDYINKIISKDLNPKNVRVEEIMN 75
Query: 137 EENKLITVSPDTKVLRAMQLMTGH 160
+ +I+++PDT + ++M+ +
Sbjct: 76 --SPIISITPDTPTFKVAEIMSKN 97
>gi|407462210|ref|YP_006773527.1| signal-transduction protein [Candidatus Nitrosopumilus koreensis
AR1]
gi|407045832|gb|AFS80585.1| signal-transduction protein [Candidatus Nitrosopumilus koreensis
AR1]
Length = 145
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
++ DA + M + NVG ++V + GIITERD++ K+ +GR T++G++M+
Sbjct: 22 SLQDAAQEMNKLNVGCVIVT---DNSKPIGIITERDFVTKVAAEGR-PLFTEIGEVMS-- 75
Query: 139 NKLITVSPDTKVLRAMQLMTGHML 162
+ LIT+SPD + A ++M +++
Sbjct: 76 SPLITISPDETIWEASEMMKENLI 99
>gi|65318148|ref|ZP_00391107.1| COG0517: FOG: CBS domain [Bacillus anthracis str. A2012]
Length = 143
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+V+PD + +A +LM H +
Sbjct: 66 NKITNVMT--TNIISVAPDDSLEKATELMAQHQI 97
>gi|302526647|ref|ZP_07278989.1| signal-transduction protein [Streptomyces sp. AA4]
gi|302435542|gb|EFL07358.1| signal-transduction protein [Streptomyces sp. AA4]
Length = 139
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
DTV DA ++M + +GAL V GE + G++T+RD + K+I +G+ ++ G++
Sbjct: 19 DTVNDAARTMAREQLGALPVC--GEDNRLKGMLTDRDIVVKVIAEGKDPRAVHAGELA-- 74
Query: 138 ENKLITVSPDTKVLRAMQLMTGH 160
+ + +T+ D V +Q M+ H
Sbjct: 75 QGEAVTIGADDDVAEILQTMSQH 97
>gi|229016050|ref|ZP_04173004.1| CBS domain protein [Bacillus cereus AH1273]
gi|229022272|ref|ZP_04178813.1| CBS domain protein [Bacillus cereus AH1272]
gi|228739011|gb|EEL89466.1| CBS domain protein [Bacillus cereus AH1272]
gi|228745199|gb|EEL95247.1| CBS domain protein [Bacillus cereus AH1273]
Length = 147
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 21 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 73
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ +IMT +++VSPD + +A +LM + +
Sbjct: 74 NKITNIMT--TNIVSVSPDDSIEKATELMAQYQI 105
>gi|229108329|ref|ZP_04237946.1| CBS domain protein [Bacillus cereus Rock1-15]
gi|228674956|gb|EEL30183.1| CBS domain protein [Bacillus cereus Rock1-15]
Length = 132
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 6 VHCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 58
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+VSP+ + +A +LM H +
Sbjct: 59 NKITNVMT--TNIISVSPNDSIEKATELMAQHQI 90
>gi|228996042|ref|ZP_04155695.1| CBS domain protein [Bacillus mycoides Rock3-17]
gi|229003658|ref|ZP_04161471.1| CBS domain protein [Bacillus mycoides Rock1-4]
gi|228757593|gb|EEM06825.1| CBS domain protein [Bacillus mycoides Rock1-4]
gi|228763707|gb|EEM12601.1| CBS domain protein [Bacillus mycoides Rock3-17]
Length = 139
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +G + +V E V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEEAIGMIPIV---ENNQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT E +++VSPD + A +LM H +
Sbjct: 66 NKITNVMTTE--IVSVSPDDPIENATELMAQHQI 97
>gi|423392894|ref|ZP_17370120.1| hypothetical protein ICG_04742 [Bacillus cereus BAG1X1-3]
gi|401632873|gb|EJS50656.1| hypothetical protein ICG_04742 [Bacillus cereus BAG1X1-3]
Length = 139
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ +IMT +++VSPD + +A +LM + +
Sbjct: 66 NKITNIMT--TNIVSVSPDDSIEKATELMAQYQI 97
>gi|158430766|pdb|2RC3|A Chain A, Crystal Structure Of Cbs Domain, Ne2398
gi|158430767|pdb|2RC3|B Chain B, Crystal Structure Of Cbs Domain, Ne2398
gi|158430768|pdb|2RC3|C Chain C, Crystal Structure Of Cbs Domain, Ne2398
gi|158430769|pdb|2RC3|D Chain D, Crystal Structure Of Cbs Domain, Ne2398
Length = 135
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L+ KG + + DD+V++A++ M N+GAL+V+K + + GI+TERD
Sbjct: 7 TVKHLLQEKGH----TVVAIGPDDSVFNAMQKMAADNIGALLVMK---DEKLVGILTERD 59
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEE 138
+ RK + + K T+V +IMT +
Sbjct: 60 FSRKSYLLDKPVKDTQVKEIMTRQ 83
>gi|311029881|ref|ZP_07707971.1| inosine-5'-monophosphate dehydrogenase related protein [Bacillus
sp. m3-13]
Length = 137
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+CT D V++ M +VGA+ +V+ GE + G+IT+RD + + I + + S V
Sbjct: 14 FCTPLDNVFEVATKMKDLDVGAIPIVENGE---LLGMITDRDLVVRGIAE-KHPGSNPVT 69
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTGHML 162
++M++ LIT+ PDT + A LM+ H +
Sbjct: 70 NVMSDH--LITIGPDTSIAEASHLMSEHQI 97
>gi|30260868|ref|NP_843245.1| hypothetical protein BA_0720 [Bacillus anthracis str. Ames]
gi|47526004|ref|YP_017353.1| hypothetical protein GBAA_0720 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49183711|ref|YP_026963.1| hypothetical protein BAS0687 [Bacillus anthracis str. Sterne]
gi|165872470|ref|ZP_02217104.1| CBS domain protein [Bacillus anthracis str. A0488]
gi|167635986|ref|ZP_02394293.1| CBS domain protein [Bacillus anthracis str. A0442]
gi|167641349|ref|ZP_02399601.1| CBS domain protein [Bacillus anthracis str. A0193]
gi|170689129|ref|ZP_02880327.1| CBS domain protein [Bacillus anthracis str. A0465]
gi|177654736|ref|ZP_02936524.1| CBS domain protein [Bacillus anthracis str. A0174]
gi|190568830|ref|ZP_03021733.1| CBS domain protein [Bacillus anthracis str. Tsiankovskii-I]
gi|227816408|ref|YP_002816417.1| hypothetical protein BAMEG_3841 [Bacillus anthracis str. CDC 684]
gi|229602165|ref|YP_002865315.1| CBS domain protein [Bacillus anthracis str. A0248]
gi|254686651|ref|ZP_05150510.1| CBS domain protein [Bacillus anthracis str. CNEVA-9066]
gi|254725865|ref|ZP_05187647.1| CBS domain protein [Bacillus anthracis str. A1055]
gi|254753199|ref|ZP_05205235.1| CBS domain protein [Bacillus anthracis str. Vollum]
gi|254757113|ref|ZP_05209141.1| CBS domain protein [Bacillus anthracis str. Australia 94]
gi|386734563|ref|YP_006207744.1| hypothetical protein [Bacillus anthracis str. H9401]
gi|421506682|ref|ZP_15953604.1| hypothetical protein B353_02127 [Bacillus anthracis str. UR-1]
gi|421637365|ref|ZP_16077962.1| hypothetical protein BABF1_09290 [Bacillus anthracis str. BF1]
gi|30254317|gb|AAP24731.1| CBS domain protein [Bacillus anthracis str. Ames]
gi|47501152|gb|AAT29828.1| CBS domain protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49177638|gb|AAT53014.1| CBS domain protein [Bacillus anthracis str. Sterne]
gi|164711795|gb|EDR17338.1| CBS domain protein [Bacillus anthracis str. A0488]
gi|167510740|gb|EDR86134.1| CBS domain protein [Bacillus anthracis str. A0193]
gi|167528658|gb|EDR91418.1| CBS domain protein [Bacillus anthracis str. A0442]
gi|170666877|gb|EDT17642.1| CBS domain protein [Bacillus anthracis str. A0465]
gi|172080550|gb|EDT65635.1| CBS domain protein [Bacillus anthracis str. A0174]
gi|190560067|gb|EDV14049.1| CBS domain protein [Bacillus anthracis str. Tsiankovskii-I]
gi|227002888|gb|ACP12631.1| CBS domain protein [Bacillus anthracis str. CDC 684]
gi|229266573|gb|ACQ48210.1| CBS domain protein [Bacillus anthracis str. A0248]
gi|384384415|gb|AFH82076.1| CBS domain protein [Bacillus anthracis str. H9401]
gi|401822960|gb|EJT22108.1| hypothetical protein B353_02127 [Bacillus anthracis str. UR-1]
gi|403394924|gb|EJY92163.1| hypothetical protein BABF1_09290 [Bacillus anthracis str. BF1]
Length = 139
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+V+PD + +A +LM H +
Sbjct: 66 NKITNVMT--TNIISVAPDDSLEKATELMAQHQI 97
>gi|228957141|ref|ZP_04118908.1| CBS domain protein [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|229042583|ref|ZP_04190324.1| CBS domain protein [Bacillus cereus AH676]
gi|229126148|ref|ZP_04255166.1| CBS domain protein [Bacillus cereus BDRD-Cer4]
gi|228657140|gb|EEL12960.1| CBS domain protein [Bacillus cereus BDRD-Cer4]
gi|228726676|gb|EEL77892.1| CBS domain protein [Bacillus cereus AH676]
gi|228802468|gb|EEM49318.1| CBS domain protein [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 147
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 21 VHCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 73
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+VSP+ + +A +LM H +
Sbjct: 74 NKITNVMT--TNIISVSPNDSIEKATELMAQHQI 105
>gi|261403128|ref|YP_003247352.1| putative signal transduction protein with CBS domains
[Methanocaldococcus vulcanius M7]
gi|261370121|gb|ACX72870.1| putative signal transduction protein with CBS domains
[Methanocaldococcus vulcanius M7]
Length = 194
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 11/87 (12%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D +VYD MT+HN+GA+V+V E GI+TERD +++++ SK+ K +++
Sbjct: 23 DMSVYDIANIMTEHNIGAVVIV---EDNKPVGILTERDIVKRVV-----SKNLKPKEVLA 74
Query: 137 EE---NKLITVSPDTKVLRAMQLMTGH 160
EE K+IT+ + + A ++M +
Sbjct: 75 EEVMSKKIITIHQNASITEAAKIMAKY 101
>gi|170708610|ref|ZP_02899050.1| CBS domain protein [Bacillus anthracis str. A0389]
gi|170126496|gb|EDS95383.1| CBS domain protein [Bacillus anthracis str. A0389]
Length = 139
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+V+PD + +A +LM H +
Sbjct: 66 NKITNVMT--TNIISVAPDDSLEKATELMAQHQI 97
>gi|342217032|ref|ZP_08709679.1| transcriptional repressor CcpN [Peptoniphilus sp. oral taxon 375
str. F0436]
gi|341587922|gb|EGS31322.1| transcriptional repressor CcpN [Peptoniphilus sp. oral taxon 375
str. F0436]
Length = 205
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
++YDA+ S+ +VG L V G + G+++ +D LR + G +++T VG +MT E
Sbjct: 92 SIYDAIVSLFLEDVGTLFVTNEG---LLTGVVSRKDLLRSFL--GGQTQTTPVGVLMTRE 146
Query: 139 NKLITVSPDTKVLRAMQLMTGH 160
K+I V D VL A +L+ H
Sbjct: 147 PKIIKVDKDASVLEATKLIVEH 168
>gi|333372052|ref|ZP_08463988.1| CBS domain protein [Desmospora sp. 8437]
gi|332974960|gb|EGK11870.1| CBS domain protein [Desmospora sp. 8437]
Length = 142
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ D VY A M QHN+G++ VV+ G+ V G++T+RD + + + + ++ + T VG+
Sbjct: 15 VSPQDNVYKAASLMRQHNIGSVPVVENGQ---VRGMVTDRDLVLRALAEQKNEQVT-VGE 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGHML 162
+MT N+++T +P+ V A LM + +
Sbjct: 71 VMT--NQVVTGTPEMSVDEASSLMAQNQI 97
>gi|337285150|ref|YP_004624624.1| inosine-5'-monophosphate dehydrogenase II [Pyrococcus yayanosii
CH1]
gi|334901084|gb|AEH25352.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
yayanosii CH1]
Length = 177
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDTV+ + ++++ VG+ VV+K E + GI+TERD L K++ +G+ K+ KV +IMT
Sbjct: 21 DDTVHKVARVLSRNKVGSAVVMKGDE---ILGIVTERDILDKVVAKGKDPKAIKVEEIMT 77
Query: 137 EENKLITVSPDTKVLRAMQLM 157
+ + + D V A+++M
Sbjct: 78 KTP--VKIEYDYDVQEAIEVM 96
>gi|326386343|ref|ZP_08207966.1| signal-transduction protein [Novosphingobium nitrogenifigens DSM
19370]
gi|326209004|gb|EGD59798.1| signal-transduction protein [Novosphingobium nitrogenifigens DSM
19370]
Length = 121
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKL 141
DAV+ + + +GAL V G + VAGI +ERD L + G KV D+MT +
Sbjct: 3 DAVELLAERRIGALPVEDVGAE--VAGIFSERDVLYSLQTNGADILRRKVRDVMT--TPV 58
Query: 142 ITVSPDTKVLRAMQLMT 158
IT SPD VL A+ LMT
Sbjct: 59 ITASPDQSVLEALALMT 75
>gi|15922445|ref|NP_378114.1| hypothetical protein ST2119 [Sulfolobus tokodaii str. 7]
gi|15623234|dbj|BAB67223.1| hypothetical protein STK_21190 [Sulfolobus tokodaii str. 7]
Length = 164
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+D+V A + M +HN+GALVV+ + + GIITERD + K++ +G+ KV D MT
Sbjct: 19 NDSVKTAAEEMKKHNLGALVVID--DNDKIVGIITERDIV-KVVAEGKL--DAKVKDYMT 73
Query: 137 EENKLITVSPDTKVLRAMQLMTGH 160
+I V+ DT + A+++M H
Sbjct: 74 R--NVIGVTEDTPITDALEIMLDH 95
>gi|30018896|ref|NP_830527.1| inosine-5'-monophosphate dehydrogenase [Bacillus cereus ATCC 14579]
gi|423588746|ref|ZP_17564833.1| hypothetical protein IIE_04158 [Bacillus cereus VD045]
gi|423630366|ref|ZP_17606114.1| hypothetical protein IK5_03217 [Bacillus cereus VD154]
gi|423644086|ref|ZP_17619704.1| hypothetical protein IK9_04031 [Bacillus cereus VD166]
gi|423646783|ref|ZP_17622353.1| hypothetical protein IKA_00570 [Bacillus cereus VD169]
gi|423653596|ref|ZP_17628895.1| hypothetical protein IKG_00584 [Bacillus cereus VD200]
gi|29894438|gb|AAP07728.1| Inosine-5'-monophosphate dehydrogenase related protein [Bacillus
cereus ATCC 14579]
gi|401226081|gb|EJR32624.1| hypothetical protein IIE_04158 [Bacillus cereus VD045]
gi|401265219|gb|EJR71310.1| hypothetical protein IK5_03217 [Bacillus cereus VD154]
gi|401272183|gb|EJR78182.1| hypothetical protein IK9_04031 [Bacillus cereus VD166]
gi|401286659|gb|EJR92474.1| hypothetical protein IKA_00570 [Bacillus cereus VD169]
gi|401299404|gb|EJS05001.1| hypothetical protein IKG_00584 [Bacillus cereus VD200]
Length = 139
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+VSP+ + +A +LM H +
Sbjct: 66 NKITNVMT--TNIISVSPNDSIEKATELMAQHQI 97
>gi|258516448|ref|YP_003192670.1| hypothetical protein Dtox_3316 [Desulfotomaculum acetoxidans DSM
771]
gi|257780153|gb|ACV64047.1| CBS domain-containing protein [Desulfotomaculum acetoxidans DSM
771]
Length = 144
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T TV +A + M+QHN+G+L VV+ G+ G++T+RD + +G ++ +TKVG +
Sbjct: 17 TPQQTVAEAAQLMSQHNIGSLPVVENGQ---CVGMLTDRDITLRAAAKGANAATTKVGAV 73
Query: 135 MTEENKLITVSPDTKVLRAMQLM 157
MT+E +IT +P V A +LM
Sbjct: 74 MTKE--VITAAPQMDVNEASKLM 94
>gi|138894625|ref|YP_001125078.1| inosine-5'-monophosphate dehydrogenase [Geobacillus
thermodenitrificans NG80-2]
gi|196247766|ref|ZP_03146468.1| putative signal-transduction protein with CBS domains [Geobacillus
sp. G11MC16]
gi|134266138|gb|ABO66333.1| Inosine-5'-monophosphate dehydrogenase related protein [Geobacillus
thermodenitrificans NG80-2]
gi|196212550|gb|EDY07307.1| putative signal-transduction protein with CBS domains [Geobacillus
sp. G11MC16]
Length = 141
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D +Y+ M + +VGA+ +V G + G+IT+RD ++V+G + K ST
Sbjct: 14 YCTPLDNIYEVAVKMREFDVGAIPIVDDGH---LVGMITDRD----LVVRGIAEKHPGST 66
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
V ++M+ + L+T+SPD V +A +M H +
Sbjct: 67 AVTEVMSRD--LVTLSPDDSVQKAADMMARHQI 97
>gi|134298322|ref|YP_001111818.1| signal-transduction protein [Desulfotomaculum reducens MI-1]
gi|134051022|gb|ABO48993.1| putative signal-transduction protein with CBS domains
[Desulfotomaculum reducens MI-1]
Length = 145
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
++ +A + M+QHNVG++ VV+ G + GI+T+RD + + QG++ ST V +MT
Sbjct: 21 SIQEATQLMSQHNVGSIPVVENG---NCVGIVTDRDIALRAVSQGQNPSSTTVQSVMT-- 75
Query: 139 NKLITVSPDTKVLRAMQLM 157
+ ++T SP+ V A LM
Sbjct: 76 SGVVTGSPEMDVHEAANLM 94
>gi|308172910|ref|YP_003919615.1| oxidoreductase [Bacillus amyloliquefaciens DSM 7]
gi|384158462|ref|YP_005540535.1| oxidoreductase [Bacillus amyloliquefaciens TA208]
gi|384163395|ref|YP_005544774.1| oxidoreductase [Bacillus amyloliquefaciens LL3]
gi|384167511|ref|YP_005548889.1| oxidoreductase [Bacillus amyloliquefaciens XH7]
gi|307605774|emb|CBI42145.1| putative oxidoreductase [Bacillus amyloliquefaciens DSM 7]
gi|328552550|gb|AEB23042.1| oxidoreductase [Bacillus amyloliquefaciens TA208]
gi|328910950|gb|AEB62546.1| putative oxidoreductase [Bacillus amyloliquefaciens LL3]
gi|341826790|gb|AEK88041.1| putative oxidoreductase [Bacillus amyloliquefaciens XH7]
Length = 140
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVGA+ VV GE K G++T+RD + QGR + T V
Sbjct: 15 VSPNQTIQEAAALMHQHNVGAIPVVDGGELK---GMLTDRDIALRTTAQGRDGQ-TPVSH 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
+M+ +K+++ +P+ + A QLM H + LP
Sbjct: 71 VMS--SKVVSGNPEMSLEEASQLMAQHQIRRLP 101
>gi|423421180|ref|ZP_17398269.1| hypothetical protein IE3_04652 [Bacillus cereus BAG3X2-1]
gi|401099731|gb|EJQ07733.1| hypothetical protein IE3_04652 [Bacillus cereus BAG3X2-1]
Length = 139
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ +IMT +++VSPD + +A +LM + +
Sbjct: 66 NKITNIMT--TSIVSVSPDDSIEKATELMAQYQI 97
>gi|383828361|ref|ZP_09983450.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora xinjiangensis XJ-54]
gi|383461014|gb|EID53104.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora xinjiangensis XJ-54]
Length = 138
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T + DI+ A + T +TV A ++M H++GAL + GE G++T+R
Sbjct: 2 TRVRDIMTA-------DPTYAETSETVSRAARTMASHDIGALPIR--GEDHHFKGMLTDR 52
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D + K++ +G+ + VG++ + + +V PD V A++ M+ H +
Sbjct: 53 DIVVKVLAEGKDPAALHVGELA--QGVVYSVGPDDDVRDALREMSNHQV 99
>gi|354559092|ref|ZP_08978344.1| putative signal transduction protein with CBS domains
[Desulfitobacterium metallireducens DSM 15288]
gi|353544262|gb|EHC13717.1| putative signal transduction protein with CBS domains
[Desulfitobacterium metallireducens DSM 15288]
Length = 140
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
W + ++ + + + N+G++ V + K + G+IT+RD L + I QG+ K+TK
Sbjct: 13 WVDPNQSLEEVAQILASSNIGSVPVC---QDKQLMGMITDRDILVRAIAQGKDPKTTKAT 69
Query: 133 DIMTEENKLITVSPDTKVLRAMQLM 157
+IMT+E + +VSP+T + +A LM
Sbjct: 70 EIMTKEVQ--SVSPETDIHQASDLM 92
>gi|158425292|ref|YP_001526584.1| hypothetical protein AZC_3668 [Azorhizobium caulinodans ORS 571]
gi|158332181|dbj|BAF89666.1| hypothetical protein AZC_3668 [Azorhizobium caulinodans ORS 571]
Length = 143
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+S IL +K S + + D ++ DAVKS+++H +GA+V V + +AGI++ERD
Sbjct: 2 TVSAILNSK----PSSMVTISPDASLTDAVKSLSEHRIGAIVAVD--DNGRLAGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R + V+G S V +MT ++T + D + M+ MT
Sbjct: 56 VVRILGVRGPEVLSEPVSAVMT--RAVVTCARDETIQGIMERMT 97
>gi|89899203|ref|YP_521674.1| signal-transduction protein [Rhodoferax ferrireducens T118]
gi|89343940|gb|ABD68143.1| putative signal-transduction protein with CBS domains [Rhodoferax
ferrireducens T118]
Length = 150
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
M +H++GALVVV E+ GI+T+RD + +++ +G GDIM+ + L+ +P
Sbjct: 29 MRKHHIGALVVVDTHEKTRPIGIVTDRDLVLELMAEGLDPAVFTAGDIMSVD--LVLATP 86
Query: 147 DTKVLRAMQLMTGHML 162
+ + A+QLM H L
Sbjct: 87 EMDAMDAVQLMKTHRL 102
>gi|330507966|ref|YP_004384394.1| CBS domain-containing protein [Methanosaeta concilii GP6]
gi|328928774|gb|AEB68576.1| CBS domain protein [Methanosaeta concilii GP6]
Length = 184
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V A K M NVG+L++V + GI+TERD +RK+I QG ++ KV +IM+
Sbjct: 21 DLDVLSAAKRMGSANVGSLIIVS---RDKTTGILTERDLVRKVIAQGVDPRNLKVREIMS 77
Query: 137 EENKLITVSPDTKVLRAMQLM 157
+ + + PD + A LM
Sbjct: 78 --SPVTAIEPDASIRDAANLM 96
>gi|30250323|ref|NP_842393.1| hypothetical protein NE2398 [Nitrosomonas europaea ATCC 19718]
gi|30181118|emb|CAD86310.1| CBS domain [Nitrosomonas europaea ATCC 19718]
Length = 146
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L+ KG + + DD+V++A++ M N+GAL+V+K + + GI+TERD
Sbjct: 3 TVKHLLQEKGH----TVVAIGPDDSVFNAMQKMAADNIGALLVMK---DEKLVGILTERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEE 138
+ RK + + K T+V +IMT +
Sbjct: 56 FSRKSYLLDKPVKDTQVKEIMTRQ 79
>gi|408404194|ref|YP_006862177.1| signal transduction protein [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|408364790|gb|AFU58520.1| putative signal transduction protein with CBS domains [Candidatus
Nitrososphaera gargensis Ga9.2]
Length = 141
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D + +A K+M + + ++ VVK G+ GI++ERD+++KI + K+GDIM+
Sbjct: 5 DKSALEAAKTMAEKGISSVFVVKDGQP---VGIVSERDFIKKICAKELPIAQVKIGDIMS 61
Query: 137 EENKLITVSPDTKVLRAMQLMTGH 160
+ L T P+T + A+Q M H
Sbjct: 62 K--ILTTADPETPIEVAVQRMVNH 83
>gi|307730415|ref|YP_003907639.1| hypothetical protein [Burkholderia sp. CCGE1003]
gi|307584950|gb|ADN58348.1| CBS domain containing protein [Burkholderia sp. CCGE1003]
Length = 152
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 60/105 (57%), Gaps = 9/105 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D ++DAV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKGN----TLFTVTPDTPLHDAVNTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
+ + G S ++ + +M ++ +T +P+T V ++M H
Sbjct: 56 ILTLKENGGSVGTSTIRKVM--DDHPLTCTPETDVNEVRRMMLEH 98
>gi|254735030|ref|ZP_05192741.1| CBS domain protein [Bacillus anthracis str. Western North America
USA6153]
Length = 140
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+V+PD + +A +LM H +
Sbjct: 66 NKITNVMT--TXIISVAPDDSLEKATELMAQHQI 97
>gi|375103591|ref|ZP_09749852.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderiales bacterium JOSHI_001]
gi|374664322|gb|EHR69107.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderiales bacterium JOSHI_001]
Length = 146
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D TV++A MT+ N G+++++ ++ GI+TERD + +++ + +TKV +MT
Sbjct: 21 DATVHEAACVMTRANCGSVLIIN--AASAMVGILTERDLMTRVLAKALDPATTKVSAVMT 78
Query: 137 EENKLITVSPDTKVLRAMQLM 157
+ + PDTKV A+ +M
Sbjct: 79 PHP--MCIPPDTKVADAVLIM 97
>gi|229137522|ref|ZP_04266129.1| CBS domain protein [Bacillus cereus BDRD-ST26]
gi|228645882|gb|EEL02109.1| CBS domain protein [Bacillus cereus BDRD-ST26]
Length = 147
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 56/94 (59%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 21 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 73
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT+ +++VSPD + +A +LM + +
Sbjct: 74 NKITNVMTK--NIVSVSPDDPIEKATELMAQYQI 105
>gi|16077988|ref|NP_388804.1| oxidoreductase [Bacillus subtilis subsp. subtilis str. 168]
gi|221308762|ref|ZP_03590609.1| hypothetical protein Bsubs1_05098 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313084|ref|ZP_03594889.1| hypothetical protein BsubsN3_05039 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318010|ref|ZP_03599304.1| hypothetical protein BsubsJ_04983 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322284|ref|ZP_03603578.1| hypothetical protein BsubsS_05084 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321314647|ref|YP_004206934.1| putative oxidoreductase [Bacillus subtilis BSn5]
gi|384174609|ref|YP_005555994.1| CBS domain pair family protein [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|452914486|ref|ZP_21963113.1| CBS domain protein [Bacillus subtilis MB73/2]
gi|1724016|sp|P54606.1|YHCV_BACSU RecName: Full=CBS domain-containing protein YhcV
gi|1239998|emb|CAA65706.1| hypothetical protein [Bacillus subtilis subsp. subtilis str. 168]
gi|2633246|emb|CAB12751.1| putative oxidoreductase [Bacillus subtilis subsp. subtilis str.
168]
gi|320020921|gb|ADV95907.1| putative oxidoreductase [Bacillus subtilis BSn5]
gi|349593833|gb|AEP90020.1| CBS domain pair family protein [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|407956603|dbj|BAM49843.1| oxidoreductase [Bacillus subtilis BEST7613]
gi|407963873|dbj|BAM57112.1| oxidoreductase [Bacillus subtilis BEST7003]
gi|452116906|gb|EME07301.1| CBS domain protein [Bacillus subtilis MB73/2]
Length = 140
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ T+ +A M QHNVGA+ VV EQ + G++T+RD + QGR + T V ++M+
Sbjct: 18 NQTIQEAASLMKQHNVGAIPVV---EQGVLKGMLTDRDIALRTTAQGRDGQ-TPVSEVMS 73
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML 162
E L++ +P+ + A QLM H +
Sbjct: 74 TE--LVSGNPNMSLEDASQLMAQHQI 97
>gi|422633526|ref|ZP_16698662.1| CBS domain-containing protein [Pseudomonas syringae pv. pisi str.
1704B]
gi|330943885|gb|EGH46119.1| CBS domain-containing protein [Pseudomonas syringae pv. pisi str.
1704B]
Length = 146
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M N+GAL VV+ V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLEALKLMADKNIGALPVVE---GNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+K+ITV V M +MT
Sbjct: 81 --SKVITVDSQRSVEACMGIMT 100
>gi|186476329|ref|YP_001857799.1| CBS domain-containing protein [Burkholderia phymatum STM815]
gi|184192788|gb|ACC70753.1| CBS domain containing protein [Burkholderia phymatum STM815]
Length = 165
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 9/105 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D V +AV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 13 VSDILKVKG----NTLFTVTPDTEVNEAVTTMAEHDIGSLVVMEYGD---LVGMLTFREI 65
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
+ + G S ST + IM ++ +T +P+T V ++M H
Sbjct: 66 ILVLSRNGGSVGSTTIRKIM--DDHPLTCTPETDVNEVRRMMLEH 108
>gi|18976459|ref|NP_577816.1| inosine-5'-monophosphate dehydrogenase [Pyrococcus furiosus DSM
3638]
gi|18891998|gb|AAL80211.1| inosine-5'-monophosphate dehydrogenase related protein iv
[Pyrococcus furiosus DSM 3638]
Length = 134
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
+ T D TV +A K M + +G+LVV+ E+ +V G T+ D LR+++V G T
Sbjct: 13 LIGVTPDTTVQEASKLMMEFEIGSLVVI--DEKGNVIGFFTKSDILRRVVVPGLPY-DTP 69
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
V DIMT+E LITV+ +T + ++ M H
Sbjct: 70 VKDIMTKE--LITVNSNTPLGEVLRKMARH 97
>gi|333910613|ref|YP_004484346.1| signal transduction protein with CBS domains [Methanotorris igneus
Kol 5]
gi|333751202|gb|AEF96281.1| putative signal transduction protein with CBS domains
[Methanotorris igneus Kol 5]
Length = 176
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 76 TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
T+ TVYD M + +G +VVV+ + GI+TERD + I+ + K V DIM
Sbjct: 16 TNTTVYDVANIMKEKKIGCVVVVEKDSKP--LGIVTERDLVINIVAKNLKPKDVLVKDIM 73
Query: 136 TEENKLITVSPDTKVLRAMQLM 157
T KLIT+SP+ ++ A + M
Sbjct: 74 T--TKLITISPNATLMDAARKM 93
>gi|452821297|gb|EME28329.1| putative signal-transduction protein containing cAMP-binding and
CBS domains isoform 1 [Galdieria sulphuraria]
Length = 233
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 13/121 (10%)
Query: 34 VSSRFESVSSARMEEHGFESTTISDIL-----KAKGKGADGSWLWCTTDDTVYDAVKSMT 88
++ F S+ A +EE FE + D+L K + + S L V DAV M
Sbjct: 61 LAQYFHSMEPAVVEE--FEHVLVKDMLDHNKSKVHERLNEQSILAVELSSQVKDAVHLMA 118
Query: 89 QHNVGALVVVKPGEQKS------VAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLI 142
++ VG ++V + + V G+ TER+Y+R +++G+ + +VGD+M L+
Sbjct: 119 KYGVGCVMVTSDHSKGALHPYPDVIGMFTEREYIRNCLLKGKDKDNCRVGDVMQSNMALV 178
Query: 143 T 143
T
Sbjct: 179 T 179
>gi|319649703|ref|ZP_08003859.1| hypothetical protein HMPREF1013_00463 [Bacillus sp. 2_A_57_CT2]
gi|317398865|gb|EFV79547.1| hypothetical protein HMPREF1013_00463 [Bacillus sp. 2_A_57_CT2]
Length = 143
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS 128
G C+ D VY+ M + NVGA+ +V + + + G+IT+RD + + + + + S
Sbjct: 10 GHVESCSLLDNVYEVAVKMKELNVGAIPIV---DNEKLVGMITDRDIVLRCVAE-KHPAS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
+KV DIM+ + L+TV+ DT+ A +LM H + LP
Sbjct: 66 SKVEDIMS--SHLVTVTRDTEAREAARLMAEHQIRRLP 101
>gi|397652199|ref|YP_006492780.1| inosine-5'-monophosphate dehydrogenase [Pyrococcus furiosus COM1]
gi|393189790|gb|AFN04488.1| inosine-5'-monophosphate dehydrogenase [Pyrococcus furiosus COM1]
Length = 136
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
+ T D TV +A K M + +G+LVV+ E+ +V G T+ D LR+++V G T
Sbjct: 15 LIGVTPDTTVQEASKLMMEFEIGSLVVI--DEKGNVIGFFTKSDILRRVVVPGLPY-DTP 71
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
V DIMT+E LITV+ +T + ++ M H
Sbjct: 72 VKDIMTKE--LITVNSNTPLGEVLRKMARH 99
>gi|422667633|ref|ZP_16727495.1| CBS domain-containing protein [Pseudomonas syringae pv. aptata str.
DSM 50252]
gi|330979504|gb|EGH78107.1| CBS domain-containing protein [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 146
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M N+GAL E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLEALKLMADKNIGAL---PVVEGNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+K+ITV V M +MT
Sbjct: 81 --SKVITVDSQRSVEACMGIMT 100
>gi|229171504|ref|ZP_04299085.1| CBS domain protein [Bacillus cereus MM3]
gi|228611942|gb|EEK69183.1| CBS domain protein [Bacillus cereus MM3]
Length = 147
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 21 VHCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 73
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +++VSPD + +A +LM + +
Sbjct: 74 NKITNVMT--TNIVSVSPDEPIEKATELMAQYQI 105
>gi|402775147|ref|YP_006629091.1| oxidoreductase [Bacillus subtilis QB928]
gi|418033987|ref|ZP_12672464.1| hypothetical protein BSSC8_34080 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|430759296|ref|YP_007210374.1| hypothetical protein A7A1_3804 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|449093627|ref|YP_007426118.1| putative oxidoreductase [Bacillus subtilis XF-1]
gi|351470135|gb|EHA30311.1| hypothetical protein BSSC8_34080 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|402480331|gb|AFQ56840.1| Putative oxidoreductase [Bacillus subtilis QB928]
gi|430023816|gb|AGA24422.1| Hypothetical protein YhcV [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|449027542|gb|AGE62781.1| putative oxidoreductase [Bacillus subtilis XF-1]
Length = 146
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ T+ +A M QHNVGA+ VV EQ + G++T+RD + QGR + T V ++M+
Sbjct: 24 NQTIQEAASLMKQHNVGAIPVV---EQGVLKGMLTDRDIALRTTAQGRDGQ-TPVSEVMS 79
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML 162
E L++ +P+ + A QLM H +
Sbjct: 80 TE--LVSGNPNMSLEDASQLMAQHQI 103
>gi|124002149|ref|ZP_01687003.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Microscilla
marina ATCC 23134]
gi|123992615|gb|EAY31960.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Microscilla
marina ATCC 23134]
Length = 649
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C+ TV++A K M+ NVG+++VV + GIIT+ D+ RK++ + + K+ V +
Sbjct: 184 CSPTHTVWEAAKIMSIFNVGSILVV--NNENYPVGIITDSDFRRKVVARQETIKTNPVTE 241
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGH 160
IM+ K T+ P+ V M LM +
Sbjct: 242 IMSSPVK--TIKPNLSVSEIMLLMVNN 266
>gi|428278432|ref|YP_005560167.1| hypothetical protein BSNT_01590 [Bacillus subtilis subsp. natto
BEST195]
gi|291483389|dbj|BAI84464.1| hypothetical protein BSNT_01590 [Bacillus subtilis subsp. natto
BEST195]
Length = 140
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ T+ +A M QHNVGA+ VV EQ + G++T+RD + QGR + T V ++M+
Sbjct: 18 NQTIQEAASLMKQHNVGAIPVV---EQGVLKGMLTDRDITLRTTAQGRDGQ-TPVSEVMS 73
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML 162
E L++ +P+ + A QLM H +
Sbjct: 74 TE--LVSGNPNMSLEDASQLMAQHQI 97
>gi|217958303|ref|YP_002336851.1| hypothetical protein BCAH187_A0872 [Bacillus cereus AH187]
gi|222094475|ref|YP_002528535.1| cbs domain protein [Bacillus cereus Q1]
gi|375282793|ref|YP_005103231.1| hypothetical protein BCN_0698 [Bacillus cereus NC7401]
gi|423357176|ref|ZP_17334776.1| hypothetical protein IAU_05225 [Bacillus cereus IS075]
gi|423376331|ref|ZP_17353644.1| hypothetical protein IC5_05360 [Bacillus cereus AND1407]
gi|423570238|ref|ZP_17546484.1| hypothetical protein II7_03460 [Bacillus cereus MSX-A12]
gi|423607455|ref|ZP_17583348.1| hypothetical protein IIK_04036 [Bacillus cereus VD102]
gi|217063462|gb|ACJ77712.1| CBS domain protein [Bacillus cereus AH187]
gi|221238533|gb|ACM11243.1| CBS domain protein [Bacillus cereus Q1]
gi|358351319|dbj|BAL16491.1| CBS domain protein [Bacillus cereus NC7401]
gi|401075906|gb|EJP84272.1| hypothetical protein IAU_05225 [Bacillus cereus IS075]
gi|401088567|gb|EJP96751.1| hypothetical protein IC5_05360 [Bacillus cereus AND1407]
gi|401204305|gb|EJR11123.1| hypothetical protein II7_03460 [Bacillus cereus MSX-A12]
gi|401240796|gb|EJR47196.1| hypothetical protein IIK_04036 [Bacillus cereus VD102]
Length = 139
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 56/94 (59%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT+ +++VSPD + +A +LM + +
Sbjct: 66 NKITNVMTK--NIVSVSPDDPIEKATELMAQYQI 97
>gi|407984288|ref|ZP_11164911.1| hypothetical protein C731_2879 [Mycobacterium hassiacum DSM 44199]
gi|407374129|gb|EKF23122.1| hypothetical protein C731_2879 [Mycobacterium hassiacum DSM 44199]
Length = 142
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 9/103 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + T + +V + + HN+GA+VVV P V GI++ERD
Sbjct: 3 IADVLRNKGS----AVATITPETSVAGLLTELAVHNIGAMVVVSP---DGVVGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R + +G + V +IMT + ++T SP+ V +LMT
Sbjct: 56 VRALQRRGAELLTQPVSEIMT--SMVVTCSPEDSVDSLTRLMT 96
>gi|320161875|ref|YP_004175100.1| hypothetical protein ANT_24740 [Anaerolinea thermophila UNI-1]
gi|319995729|dbj|BAJ64500.1| hypothetical protein ANT_24740 [Anaerolinea thermophila UNI-1]
Length = 148
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 11/104 (10%)
Query: 56 ISDILKAKGKGADGSWLWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+ DILK KG + +W + DDT+ + + + NVGAL+V+ GE+ +AGI++ERD
Sbjct: 5 VEDILKEKG-----NQIWSVSPDDTLLTTLLKLAEKNVGALLVMD-GER--IAGIVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R+I + + MTE+ +ITV+ T V MQLMT
Sbjct: 57 IVREIALHRACVLDAPIKAFMTED--VITVNSQTTVDECMQLMT 98
>gi|283779970|ref|YP_003370725.1| signal transduction protein with CBS domains [Pirellula staleyi DSM
6068]
gi|283438423|gb|ADB16865.1| putative signal transduction protein with CBS domains [Pirellula
staleyi DSM 6068]
Length = 145
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVK-PGEQKSVAGIITERD 114
+ DIL+ KG L C DT+ V+ + ++N+G+LVV + +++ + GIITERD
Sbjct: 3 VRDILQTKGSAV----LTCQPGDTLARVVELLVRYNIGSLVVRESKADRQPMLGIITERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
LR + + ++T V D MT + + S + AM LMT H
Sbjct: 59 LLRFAAEKRGTLENTFVADRMTRDPYICHASDELH--HAMGLMTEH 102
>gi|407795838|ref|ZP_11142795.1| hypothetical protein MJ3_03012 [Salimicrobium sp. MJ3]
gi|407019658|gb|EKE32373.1| hypothetical protein MJ3_03012 [Salimicrobium sp. MJ3]
Length = 140
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ C DT+ K M + VG +V+ EQ AG+IT+RD + + +G S+++ K
Sbjct: 13 VACEASDTLTTIAKRMKEEEVGFVVIT---EQDKYAGVITDRDIVVNGLAKG-SAENVKA 68
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
DIMT +K++T + D +V A +LM H +
Sbjct: 69 SDIMT--DKVVTATSDMEVQEAARLMQDHQI 97
>gi|384178679|ref|YP_005564441.1| hypothetical protein YBT020_03885 [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324324763|gb|ADY20023.1| CBS domain protein [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 139
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 56/94 (59%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT+ +++VSPD + +A +LM + +
Sbjct: 66 NKITNVMTK--NIVSVSPDDAIEKATELMAQYQI 97
>gi|315426521|dbj|BAJ48152.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
gi|343485273|dbj|BAJ50927.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
Length = 138
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV DAVK M ++ V +LVV + QK G++TERD +R+ I +GR + KVG+IM+
Sbjct: 23 TVADAVKKMLENEVWSLVVTR---QKLPIGVVTERDIIRRCIGKGRPM-TIKVGEIMS-- 76
Query: 139 NKLITVSPDTKVLRAM 154
+ T+SPD + AM
Sbjct: 77 TPIETISPDASLGEAM 92
>gi|229159799|ref|ZP_04287806.1| CBS domain protein [Bacillus cereus R309803]
gi|228623538|gb|EEK80357.1| CBS domain protein [Bacillus cereus R309803]
Length = 139
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +++VSPD + +A +LM + +
Sbjct: 66 NKITNVMT--TNIVSVSPDDAIEKATELMAQYQI 97
>gi|83309972|ref|YP_420236.1| CBS domain-containing protein [Magnetospirillum magneticum AMB-1]
gi|82944813|dbj|BAE49677.1| CBS domain [Magnetospirillum magneticum AMB-1]
Length = 146
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 7/100 (7%)
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
ILK+K +G G + T + ++ DA + + QH +GA V+V G++ VAGI++ERD +R
Sbjct: 6 ILKSKARG--GGIISVTPEASIGDAARLLAQHKIGA-VLVMNGDR--VAGILSERDIVRG 60
Query: 119 IIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ + KV D+MT E + D V R M++MT
Sbjct: 61 LADAVDVCITAKVRDLMTAE--VFVCHEDDTVERLMEIMT 98
>gi|331695746|ref|YP_004331985.1| signal transduction protein [Pseudonocardia dioxanivorans CB1190]
gi|326950435|gb|AEA24132.1| putative signal transduction protein with CBS domains
[Pseudonocardia dioxanivorans CB1190]
Length = 144
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
I+D+L KG+ W T V +AV+ + ++ +GAL+V GE + + GI++ERD
Sbjct: 2 NIADVLDTKGRTVHSVVPWAT----VAEAVERLEKYRIGALLV-SDGENR-IRGIVSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R++ +G S V DIMT + TVS + AM MT
Sbjct: 56 VIRELARRGNRLLSCNVEDIMTR--NVATVSSTESLTYAMAQMT 97
>gi|374995941|ref|YP_004971440.1| signal transduction protein [Desulfosporosinus orientis DSM 765]
gi|357214307|gb|AET68925.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Desulfosporosinus orientis DSM 765]
Length = 140
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
W + +V + K M ++VG++ V E V GIIT+RD + K++ G++ +S
Sbjct: 13 WVAPNASVVEIAKLMKSNDVGSIPVC---EDMKVEGIITDRDIVLKVVAAGKTIESCIAK 69
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DIM + L+TV+PD V A LM+ + + LP
Sbjct: 70 DIMN--SNLVTVTPDQDVHEAADLMSQYQIRRLP 101
>gi|409095429|ref|ZP_11215453.1| hypothetical protein TzilA_02130 [Thermococcus zilligii AN1]
Length = 177
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDTV+ A + + ++ VG+ VVV E + + GIIT+RD L K++ + + K+ V ++MT
Sbjct: 20 DDTVHKAAQILARNKVGSAVVVD--ENERIVGIITDRDILDKVVAKEKDPKNVLVREVMT 77
Query: 137 EENKLITVSPDTKVLRAMQLM 157
E K IT+ D + A++ M
Sbjct: 78 E--KPITIEDDYTIQDAIERM 96
>gi|326202075|ref|ZP_08191945.1| putative signal transduction protein with CBS domains [Clostridium
papyrosolvens DSM 2782]
gi|325987870|gb|EGD48696.1| putative signal transduction protein with CBS domains [Clostridium
papyrosolvens DSM 2782]
Length = 141
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ + ++ D K M QHNVG++ V G SV G++T+RD + + I G++ + T V
Sbjct: 13 YVEPNASIVDTAKLMQQHNVGSIPVCDKG---SVVGMVTDRDIVVRNIAIGKNPQQTPVS 69
Query: 133 DIMTEENKLITVSPDTKVLRAMQLM 157
DIMT + +VSPD ++ + ++M
Sbjct: 70 DIMT--TGITSVSPDMEMSQVTKMM 92
>gi|15615168|ref|NP_243471.1| hypothetical protein BH2605 [Bacillus halodurans C-125]
gi|10175226|dbj|BAB06324.1| BH2605 [Bacillus halodurans C-125]
Length = 142
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 52/85 (61%), Gaps = 6/85 (7%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+C+ DD +++ M + NVGA+ + E++ + G++T+RD + + + + + + ST V
Sbjct: 14 YCSPDDNIFEVAVKMERDNVGAVPIC---EEEQLLGMVTDRDIVIRSVAKKKPN-STPVK 69
Query: 133 DIMTEENKLITVSPDTKVLRAMQLM 157
++M+E L+T +PD V A +LM
Sbjct: 70 EVMSEH--LVTATPDMTVQEAAKLM 92
>gi|229195046|ref|ZP_04321821.1| CBS domain protein [Bacillus cereus m1293]
gi|228588275|gb|EEK46318.1| CBS domain protein [Bacillus cereus m1293]
Length = 147
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 55/92 (59%), Gaps = 12/92 (13%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---STK 130
CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S K
Sbjct: 23 CTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGSNK 75
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
+ ++MT+ +++VSPD + +A +LM + +
Sbjct: 76 ITNVMTK--NIVSVSPDDPIEKATELMAQYQI 105
>gi|126735621|ref|ZP_01751366.1| CBS domain protein [Roseobacter sp. CCS2]
gi|126714808|gb|EBA11674.1| CBS domain protein [Roseobacter sp. CCS2]
Length = 144
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV DA K +++H +G +VV GE ++ GI++ERD +R++ +G + V D+MT
Sbjct: 23 TVTDAAKLLSKHRIGTVVVSADGE--TLDGILSERDIVRELGKRGMGCLNDPVRDLMTA- 79
Query: 139 NKLITVSPDTKVLRAMQLMT 158
KL T P L +++MT
Sbjct: 80 -KLTTCGPSNNALEVLEIMT 98
>gi|212223889|ref|YP_002307125.1| hypothetical protein TON_0740 [Thermococcus onnurineus NA1]
gi|212008846|gb|ACJ16228.1| hypothetical protein, conserved [Thermococcus onnurineus NA1]
Length = 135
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 10/91 (10%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDTV A + M + ++G+LVVV G+ V G T+ D +R++++ G + +T V +IM+
Sbjct: 21 DDTVKRACEVMVEFDIGSLVVVDKGK---VIGFFTKSDVIRRVVIPGLPN-TTPVREIMS 76
Query: 137 EENKLITVSPDTKVLRAMQLM----TGHMLL 163
E LITV+ +T V + LM HML+
Sbjct: 77 SE--LITVNANTPVREVLDLMAKKGVKHMLI 105
>gi|392378468|ref|YP_004985628.1| conserved protein of unknown function with CBS domain [Azospirillum
brasilense Sp245]
gi|356879950|emb|CCD00887.1| conserved protein of unknown function with CBS domain [Azospirillum
brasilense Sp245]
Length = 144
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+ +LK KG + DD + + + H +GA++V++ + AGI++ERD
Sbjct: 3 IAAVLKRKGT----EIITANPDDRIDAVARKLAHHKIGAVLVMR--DDGRPAGILSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R + G S+ VG++MT + L+T SP V + M +MT
Sbjct: 57 VRAVAADGASALERPVGELMTRD--LVTGSPADTVSQIMGVMT 97
>gi|42779868|ref|NP_977115.1| hypothetical protein BCE_0791 [Bacillus cereus ATCC 10987]
gi|42735785|gb|AAS39723.1| CBS domain protein [Bacillus cereus ATCC 10987]
Length = 139
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +++VSPD + +A +LM + +
Sbjct: 66 NKITNVMT--TNIVSVSPDDPIEKATELMAQYQI 97
>gi|402553745|ref|YP_006595016.1| hypothetical protein BCK_04530 [Bacillus cereus FRI-35]
gi|401794955|gb|AFQ08814.1| hypothetical protein BCK_04530 [Bacillus cereus FRI-35]
Length = 139
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +++VSPD + +A +LM + +
Sbjct: 66 NKITNVMT--TNIVSVSPDDSIEKATELMAQYQI 97
>gi|308173460|ref|YP_003920165.1| oxidoreductase [Bacillus amyloliquefaciens DSM 7]
gi|384159523|ref|YP_005541596.1| oxidoreductase [Bacillus amyloliquefaciens TA208]
gi|384164040|ref|YP_005545419.1| oxidoreductase [Bacillus amyloliquefaciens LL3]
gi|384168574|ref|YP_005549952.1| oxidoreductase [Bacillus amyloliquefaciens XH7]
gi|307606324|emb|CBI42695.1| putative oxidoreductase [Bacillus amyloliquefaciens DSM 7]
gi|328553611|gb|AEB24103.1| oxidoreductase [Bacillus amyloliquefaciens TA208]
gi|328911595|gb|AEB63191.1| putative oxidoreductase [Bacillus amyloliquefaciens LL3]
gi|341827853|gb|AEK89104.1| putative oxidoreductase [Bacillus amyloliquefaciens XH7]
Length = 147
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+CT D VY+A M +VGA+ +V + +++ GI+T+RD + + I R + S K+
Sbjct: 14 YCTVLDNVYEAAVKMKDADVGAIPIVDE-DGETLVGIVTDRDLVLRGIASKRPN-SQKIT 71
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D MTE ++I+ D V + +M H L
Sbjct: 72 DAMTE--RVISAEEDASVEEVLHMMAEHQL 99
>gi|163938642|ref|YP_001643526.1| signal-transduction protein [Bacillus weihenstephanensis KBAB4]
gi|229056489|ref|ZP_04195897.1| CBS domain protein [Bacillus cereus AH603]
gi|229131671|ref|ZP_04260548.1| CBS domain protein [Bacillus cereus BDRD-ST196]
gi|229165662|ref|ZP_04293430.1| CBS domain protein [Bacillus cereus AH621]
gi|423367379|ref|ZP_17344812.1| hypothetical protein IC3_02481 [Bacillus cereus VD142]
gi|423508680|ref|ZP_17485211.1| hypothetical protein IG3_00177 [Bacillus cereus HuA2-1]
gi|423515498|ref|ZP_17491979.1| hypothetical protein IG7_00568 [Bacillus cereus HuA2-4]
gi|423595278|ref|ZP_17571309.1| hypothetical protein IIG_04146 [Bacillus cereus VD048]
gi|423666518|ref|ZP_17641547.1| hypothetical protein IKO_00215 [Bacillus cereus VDM034]
gi|423677429|ref|ZP_17652368.1| hypothetical protein IKS_04972 [Bacillus cereus VDM062]
gi|163860839|gb|ABY41898.1| putative signal-transduction protein with CBS domains [Bacillus
weihenstephanensis KBAB4]
gi|228617663|gb|EEK74720.1| CBS domain protein [Bacillus cereus AH621]
gi|228651725|gb|EEL07685.1| CBS domain protein [Bacillus cereus BDRD-ST196]
gi|228720814|gb|EEL72369.1| CBS domain protein [Bacillus cereus AH603]
gi|401085489|gb|EJP93731.1| hypothetical protein IC3_02481 [Bacillus cereus VD142]
gi|401166886|gb|EJQ74184.1| hypothetical protein IG7_00568 [Bacillus cereus HuA2-4]
gi|401222549|gb|EJR29139.1| hypothetical protein IIG_04146 [Bacillus cereus VD048]
gi|401305244|gb|EJS10785.1| hypothetical protein IKO_00215 [Bacillus cereus VDM034]
gi|401307044|gb|EJS12510.1| hypothetical protein IKS_04972 [Bacillus cereus VDM062]
gi|402457576|gb|EJV89339.1| hypothetical protein IG3_00177 [Bacillus cereus HuA2-1]
Length = 139
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + V+ E K V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVI---ENKQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
++ ++MT +++VSPD + +A +LM + +
Sbjct: 66 NQITNVMT--TNIVSVSPDDSIEKATELMAQYQI 97
>gi|423404639|ref|ZP_17381812.1| hypothetical protein ICW_05037 [Bacillus cereus BAG2X1-2]
gi|423474725|ref|ZP_17451440.1| hypothetical protein IEO_00183 [Bacillus cereus BAG6X1-1]
gi|401646597|gb|EJS64218.1| hypothetical protein ICW_05037 [Bacillus cereus BAG2X1-2]
gi|402438001|gb|EJV70021.1| hypothetical protein IEO_00183 [Bacillus cereus BAG6X1-1]
Length = 139
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +++VSPD + +A +LM + +
Sbjct: 66 NKITNVMT--TNIVSVSPDDSIEKATELMAQYQI 97
>gi|229010151|ref|ZP_04167361.1| CBS domain protein [Bacillus mycoides DSM 2048]
gi|423485939|ref|ZP_17462621.1| hypothetical protein IEU_00562 [Bacillus cereus BtB2-4]
gi|423491663|ref|ZP_17468307.1| hypothetical protein IEW_00561 [Bacillus cereus CER057]
gi|423501544|ref|ZP_17478161.1| hypothetical protein IEY_04771 [Bacillus cereus CER074]
gi|423601824|ref|ZP_17577824.1| hypothetical protein III_04626 [Bacillus cereus VD078]
gi|423664295|ref|ZP_17639464.1| hypothetical protein IKM_04692 [Bacillus cereus VDM022]
gi|228751001|gb|EEM00817.1| CBS domain protein [Bacillus mycoides DSM 2048]
gi|401153636|gb|EJQ61061.1| hypothetical protein IEY_04771 [Bacillus cereus CER074]
gi|401158596|gb|EJQ65986.1| hypothetical protein IEW_00561 [Bacillus cereus CER057]
gi|401228947|gb|EJR35467.1| hypothetical protein III_04626 [Bacillus cereus VD078]
gi|401293590|gb|EJR99229.1| hypothetical protein IKM_04692 [Bacillus cereus VDM022]
gi|402440500|gb|EJV72492.1| hypothetical protein IEU_00562 [Bacillus cereus BtB2-4]
Length = 139
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + V+ E K V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVI---ENKQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
++ ++MT +++VSPD + +A +LM + +
Sbjct: 66 NQITNVMT--TNIVSVSPDDSIEKATELMAQYQI 97
>gi|423480783|ref|ZP_17457473.1| hypothetical protein IEQ_00561 [Bacillus cereus BAG6X1-2]
gi|401146669|gb|EJQ54180.1| hypothetical protein IEQ_00561 [Bacillus cereus BAG6X1-2]
Length = 139
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + V+ E K V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGMIPVI---ENKQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
++ ++MT +++VSPD + +A +LM + +
Sbjct: 66 NQITNVMT--TNIVSVSPDDSIEKATELMAQYQI 97
>gi|324998234|ref|ZP_08119346.1| hypothetical protein PseP1_05678 [Pseudonocardia sp. P1]
Length = 147
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDIL+ KG W T + A + +GALVV G ++ V GI++ERD
Sbjct: 3 VSDILRIKGDAVQTVLSWNTVGEA---ATRLAGPPAIGALVVSDDGFRERVDGIVSERDI 59
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT--GHMLLP 164
+R++ G + V D+MT +IT PD + M M H LP
Sbjct: 60 VRRLASDGGAVSRLTVADVMTRH--VITCRPDDPIAEVMAQMNRWRHRHLP 108
>gi|103488184|ref|YP_617745.1| signal-transduction protein [Sphingopyxis alaskensis RB2256]
gi|98978261|gb|ABF54412.1| putative signal-transduction protein with CBS domains [Sphingopyxis
alaskensis RB2256]
Length = 141
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 65 KGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124
+G GS + DDTV + Q+ +GA+ VV + +V GI +ERD +R I G
Sbjct: 8 RGRTGSVISAQPDDTVRAVADLLAQNRIGAVPVV---DGDAVVGIFSERDIVRLISSYGP 64
Query: 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ ++ D+MT+ IT +PD V+ A+ MT
Sbjct: 65 EALDRRIDDVMTKSP--ITCAPDMAVIVALSQMT 96
>gi|332158424|ref|YP_004423703.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
sp. NA2]
gi|331033887|gb|AEC51699.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
sp. NA2]
Length = 178
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+DTV+ + ++++ VG+ VV+ E+ + GI+TERD L K++ +G+ K KV +IMT
Sbjct: 21 NDTVHKVARILSKNKVGSAVVM---EKDEILGIVTERDILDKVVAKGKDPKEVKVEEIMT 77
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+ + D V A+++MT
Sbjct: 78 RNP--VKIEYDYDVQDAIEVMT 97
>gi|119898433|ref|YP_933646.1| putative inosine-5'-monophosphate dehydrogenase related protein
[Azoarcus sp. BH72]
gi|119670846|emb|CAL94759.1| putative inosine-5'-monophosphate dehydrogenase related protein
[Azoarcus sp. BH72]
Length = 143
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV +A + MT +VG++++V G ++GI TERD L ++I GR T++ ++MT +
Sbjct: 23 TVLEASRRMTDLHVGSIMIVHDGH---LSGIFTERDALVRVIAAGRDPARTRLSEVMTRD 79
Query: 139 NKLITVSPDTKVLRAMQLM 157
+ ++S D + AM LM
Sbjct: 80 PQ--SISSDRPLGHAMHLM 96
>gi|89899448|ref|YP_521919.1| signal-transduction protein [Rhodoferax ferrireducens T118]
gi|89344185|gb|ABD68388.1| putative signal-transduction protein with CBS domains [Rhodoferax
ferrireducens T118]
Length = 140
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
+L + TV DA + M NVGA++VV + + GI TERD + ++I +GR + +T+
Sbjct: 15 FLTAPPETTVSDAARLMADRNVGAVLVVA---DEHLLGIFTERDAVFRVIAKGRDANTTQ 71
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLM 157
+ ++MT + K T+ P A+ +M
Sbjct: 72 LTEVMTVDPK--TLEPGKTYGHALLIM 96
>gi|393720647|ref|ZP_10340574.1| signal-transduction protein [Sphingomonas echinoides ATCC 14820]
Length = 142
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI+ IL KG+ + T +V DAV + VGA+ V+ E V GI +ERD
Sbjct: 2 TIAAILGNKGR----EVISITAQHSVGDAVAVLATRRVGAVPVM---EGNRVVGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ I G + + VGD MT ITV+P V+ A+ LMT
Sbjct: 55 VIHAIHAYGADAMARSVGDTMTAPP--ITVTPGEAVIGALSLMT 96
>gi|298674002|ref|YP_003725752.1| putative signal transduction protein [Methanohalobium evestigatum
Z-7303]
gi|298286990|gb|ADI72956.1| putative signal transduction protein with CBS domains
[Methanohalobium evestigatum Z-7303]
Length = 211
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D +V D K M+++NVG++++V+ + G+ITERD ++KI+ G++M+
Sbjct: 38 DASVVDVAKEMSKNNVGSIIIVQNNDP---VGVITERDLVKKILTGDIRPSRITAGEVMS 94
Query: 137 EENKLITVSPDTKVLRAMQLM 157
+ LIT P T V+ A +LM
Sbjct: 95 --SPLITTKPSTSVIDAAELM 113
>gi|383822248|ref|ZP_09977476.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium phlei RIVM601174]
gi|383331808|gb|EID10303.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium phlei RIVM601174]
Length = 142
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L++KG + T +V + + HN+GA+VVV P +AGI++ERD
Sbjct: 3 IADVLRSKGS----AVATITPQTSVAGLLTELAVHNIGAMVVVSP---DGLAGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
+R + +G + V +IMT + + T SPD V LMT +
Sbjct: 56 VRALHRRGADLLTCPVSEIMT--SLVATCSPDDTVDSLSALMTNN 98
>gi|220929202|ref|YP_002506111.1| signal transduction protein with CBS domains [Clostridium
cellulolyticum H10]
gi|219999530|gb|ACL76131.1| putative signal transduction protein with CBS domains [Clostridium
cellulolyticum H10]
Length = 141
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
++ D K M QHNVG++ V G SV G++T+RD + + I G++ + T V DIMT
Sbjct: 19 SILDTAKLMQQHNVGSIPVCDKG---SVVGMVTDRDIVVRNIAIGKNPQQTPVSDIMT-- 73
Query: 139 NKLITVSPDTKVLRAMQLM 157
+ +VSPD ++ + ++M
Sbjct: 74 TGVTSVSPDMEMSQVTKMM 92
>gi|407783415|ref|ZP_11130616.1| signal-transduction protein [Oceanibaculum indicum P24]
gi|407202140|gb|EKE72135.1| signal-transduction protein [Oceanibaculum indicum P24]
Length = 142
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 9/103 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + V DA K + + +G+++V+ +++ +AGI++ERD
Sbjct: 3 VSDILKTKG----ADVVAVPPSLPVSDAAKLLAEKRIGSVLVM---DREKIAGILSERDI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R + +G + V +MT K++T PD + M+LMT
Sbjct: 56 VRTLAAEGAACLDGPVSRLMT--AKVVTCRPDQSISDVMELMT 96
>gi|315230214|ref|YP_004070650.1| hypothetical protein TERMP_00450 [Thermococcus barophilus MP]
gi|315183242|gb|ADT83427.1| hypothetical protein TERMP_00450 [Thermococcus barophilus MP]
Length = 135
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDT+ +A + M + ++G+LVV+ E V G T+ D +R++IV G +T V +IMT
Sbjct: 21 DDTIQEACRIMVKFDIGSLVVI---ENDRVVGFFTKSDIIRRVIVPGLPY-TTPVKEIMT 76
Query: 137 EENKLITVSPDTKVLRAMQLMTGH 160
E LIT +T V ++ M H
Sbjct: 77 RE--LITTDANTPVREVLKTMAYH 98
>gi|83945661|ref|ZP_00958007.1| CBS domain protein [Oceanicaulis sp. HTCC2633]
gi|83851027|gb|EAP88886.1| CBS domain protein [Oceanicaulis alexandrii HTCC2633]
Length = 143
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T + IL KG + T+ +A ++TQH VGA++V G+Q G+ +ERD
Sbjct: 2 TAARILDDKG----ATVFTLAPSQTLQEAAVALTQHRVGAVIVTDAGDQP--VGVFSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
R I G S+ S +V +M+ LIT SP + + LMT
Sbjct: 56 LARAIAGSGPSALSERVESVMS--TGLITASPSDDIDTLLALMT 97
>gi|387898071|ref|YP_006328367.1| IMP dehydrogenase [Bacillus amyloliquefaciens Y2]
gi|387172181|gb|AFJ61642.1| IMP dehydrogenase [Bacillus amyloliquefaciens Y2]
Length = 165
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 10/93 (10%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D VY+A M +VGA+ +V + ++ GI+T+RD ++++G +SK S
Sbjct: 32 YCTVLDNVYEAAVKMKDADVGAIPIVDE-DGATLVGIVTDRD----LVLRGIASKKPNSQ 86
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ D MTE ++I+ D V + LM H L
Sbjct: 87 KITDAMTE--RVISAEEDASVEEVLHLMAEHQL 117
>gi|392382266|ref|YP_005031463.1| conserved protein of unknown function,cystathionine beta synthase
domain [Azospirillum brasilense Sp245]
gi|356877231|emb|CCC98042.1| conserved protein of unknown function,cystathionine beta synthase
domain [Azospirillum brasilense Sp245]
Length = 149
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 60/107 (56%), Gaps = 8/107 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVV--VKPGEQKSVAGIITER 113
++DIL+ K + + + +T+ +A++ M N+ ALVV V E +VAG+++ER
Sbjct: 3 VADILRTK----ESRVVTVRSGETIEEAIRLMRSENISALVVKDVCRTEGNAVAGMLSER 58
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
D + ++ +G S T V +M+ + T SPD ++ A++LM H
Sbjct: 59 DVVYALLERGASVLKTPVFMLMSRAPQ--TCSPDDSLIHALELMDRH 103
>gi|218290241|ref|ZP_03494395.1| CBS domain containing protein [Alicyclobacillus acidocaldarius
LAA1]
gi|258512183|ref|YP_003185617.1| hypothetical protein Aaci_2219 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|384136051|ref|YP_005518765.1| hypothetical protein TC41_2345 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|218239716|gb|EED06907.1| CBS domain containing protein [Alicyclobacillus acidocaldarius
LAA1]
gi|257478909|gb|ACV59228.1| CBS domain containing protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|339290136|gb|AEJ44246.1| CBS domain containing protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 145
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
C+ D++ A ++M + N G++ V E + V GI+T+RD + K + QG+ +V
Sbjct: 13 CCSATDSIQKAAQAMKRENCGSIPVC---ENRRVVGIVTDRDIVLKAVAQGKC--DARVE 67
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
D MT+ ++T PD A LM H + LP
Sbjct: 68 DCMTK--AVVTGRPDMDAHEAADLMAQHQIRRLP 99
>gi|423461277|ref|ZP_17438074.1| hypothetical protein IEI_04417 [Bacillus cereus BAG5X2-1]
gi|401137701|gb|EJQ45280.1| hypothetical protein IEI_04417 [Bacillus cereus BAG5X2-1]
Length = 139
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +++VSPD + +A +LM + +
Sbjct: 66 NKITNVMT--TNIVSVSPDDSIEKATELMAQYQI 97
>gi|298710996|emb|CBJ32303.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 118
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVS 145
M+ +NVG L+V K G V+GII+ERDY+ KI + G++SK T V +I T K++ +
Sbjct: 1 MSAYNVGCLIVTKNG---VVSGIISERDYVCKIALLGKASKDTTVKEICTRGPKMVAAA 56
>gi|323526749|ref|YP_004228902.1| hypothetical protein BC1001_2426 [Burkholderia sp. CCGE1001]
gi|407714195|ref|YP_006834760.1| hypothetical protein BUPH_03003 [Burkholderia phenoliruptrix
BR3459a]
gi|323383751|gb|ADX55842.1| CBS domain containing protein [Burkholderia sp. CCGE1001]
gi|407236379|gb|AFT86578.1| CBS domain containing protein [Burkholderia phenoliruptrix BR3459a]
Length = 152
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 60/105 (57%), Gaps = 9/105 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D ++DAV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKGN----TLFTVTPDTALHDAVVTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
+ + G S ++ + +M ++ +T +P+T V ++M H
Sbjct: 56 ILTLKENGGSVGTSTIRKVM--DDHPLTCTPETDVNEVRRMMLEH 98
>gi|284033114|ref|YP_003383045.1| putative signal transduction protein with CBS domains [Kribbella
flavida DSM 17836]
gi|283812407|gb|ADB34246.1| putative signal transduction protein with CBS domains [Kribbella
flavida DSM 17836]
Length = 141
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + + TV + + + +HNVGALVV G SVAGI++ERD
Sbjct: 3 INDVLRGKGN----QVVTISPEATVTELLALLAEHNVGALVVSPDG--TSVAGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R ++ + +V IMT +++ T PD + M+LMT
Sbjct: 57 VR-LLNSTPDAGEVRVSAIMT--SQVHTCGPDDLIDNLMRLMT 96
>gi|418460945|ref|ZP_13032028.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora azurea SZMC 14600]
gi|359738971|gb|EHK87848.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora azurea SZMC 14600]
Length = 138
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ T +TV A ++M VGAL + GE + G++T+RD + K++ +G+ + VG
Sbjct: 14 YAETSETVMRAARTMAAEGVGALPI--QGEDHKLKGMLTDRDVVVKVLAEGKDPMAVHVG 71
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTGHML 162
++ + +++ V P+ A++LM+ H +
Sbjct: 72 ELA--QGEVVAVRPEDDAAEALRLMSRHQV 99
>gi|381165005|ref|ZP_09874235.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora azurea NA-128]
gi|379256910|gb|EHY90836.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora azurea NA-128]
Length = 138
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ T +TV A ++M VGAL + GE + G++T+RD + K++ +G+ + VG
Sbjct: 14 YAETSETVMRAARTMAAEGVGALPI--QGEDHKLKGMLTDRDVVVKVLAEGKDPMAVHVG 71
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTGHML 162
++ + +++ V P+ A++LM+ H +
Sbjct: 72 ELA--QGEVVAVRPEDDAAEALRLMSRHQV 99
>gi|270159831|ref|ZP_06188487.1| CBS domain-containing protein [Legionella longbeachae D-4968]
gi|289165411|ref|YP_003455549.1| hypothetical protein LLO_2078 [Legionella longbeachae NSW150]
gi|269988170|gb|EEZ94425.1| CBS domain-containing protein [Legionella longbeachae D-4968]
gi|288858584|emb|CBJ12465.1| putative conserved hypothetical protein [Legionella longbeachae
NSW150]
Length = 146
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
++ +D+V + M++ ++GALVVV Q + GI++ERD +R + + + ++ KV
Sbjct: 17 IYIHPEDSVIKCINLMSEMDIGALVVVDNDNQ--LIGIVSERDIVRSCLHKCVNLETAKV 74
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTG 159
D++ +E ++ +SP+ + +AMQ++T
Sbjct: 75 SDVVYKE--VMILSPNDHIEKAMQVITA 100
>gi|376261376|ref|YP_005148096.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Clostridium sp. BNL1100]
gi|373945370|gb|AEY66291.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Clostridium sp. BNL1100]
Length = 141
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
++ D K M QHNVG++ V G SV G++T+RD + + I G++ + T V DIMT
Sbjct: 19 SILDTAKLMQQHNVGSIPVCDKG---SVVGMVTDRDIVVRNIAIGKNPQQTPVSDIMT-- 73
Query: 139 NKLITVSPDTKVLRAMQLM 157
+ +VSPD + + ++M
Sbjct: 74 TGITSVSPDMDMSQVTKMM 92
>gi|154685914|ref|YP_001421075.1| hypothetical protein RBAM_014810 [Bacillus amyloliquefaciens FZB42]
gi|375362142|ref|YP_005130181.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum CAU B946]
gi|421731836|ref|ZP_16170959.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|429505048|ref|YP_007186232.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
gi|451347135|ref|YP_007445766.1| YlbB [Bacillus amyloliquefaciens IT-45]
gi|154351765|gb|ABS73844.1| YlbB [Bacillus amyloliquefaciens FZB42]
gi|371568136|emb|CCF04986.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum CAU B946]
gi|407074049|gb|EKE47039.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|429486638|gb|AFZ90562.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
gi|449850893|gb|AGF27885.1| YlbB [Bacillus amyloliquefaciens IT-45]
Length = 147
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 10/93 (10%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D VY+A M +VGA+ +V + ++ GI+T+RD ++++G +SK S
Sbjct: 14 YCTVLDNVYEAAVKMKDADVGAIPIVDE-DGATLVGIVTDRD----LVLRGIASKKPNSQ 68
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ D MTE ++I+ D V + LM H L
Sbjct: 69 KITDAMTE--RVISAEEDASVEEVLHLMAEHQL 99
>gi|406707153|ref|YP_006757505.1| hypothetical protein HIMB59_00001240 [alpha proteobacterium HIMB59]
gi|406652929|gb|AFS48328.1| CBS domain protein [alpha proteobacterium HIMB59]
Length = 153
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+ DI K K + + D TV + M ++GA+ VV E + G+++ER
Sbjct: 2 TTVGDIQKVK---LNEICRFFGPDSTVSEIADMMDLQDIGAVPVV--NENNLLMGVVSER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
D +RK++ GR S DIMT K+ITV+ T + A LM +
Sbjct: 57 DIVRKLVKNGRDSDLVTAKDIMTS--KVITVTKKTSQIDAFNLMKSN 101
>gi|300787075|ref|YP_003767366.1| signal transduction protein [Amycolatopsis mediterranei U32]
gi|384150417|ref|YP_005533233.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|399538958|ref|YP_006551620.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|299796589|gb|ADJ46964.1| signal transduction protein [Amycolatopsis mediterranei U32]
gi|340528571|gb|AEK43776.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|398319728|gb|AFO78675.1| signal transduction protein [Amycolatopsis mediterranei S699]
Length = 138
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
DTV+DA +M + VGAL + GE + G+IT+RD + K++ +G+ ++ VG++
Sbjct: 19 DTVHDAAVTMARKGVGALPIC--GEDNRLKGMITDRDIVVKVLAEGKDPRAVHVGELA-- 74
Query: 138 ENKLITVSPDTKVLRAMQLMTGH 160
+ +++T+ D ++ M+ H
Sbjct: 75 QGEVVTIGADDDAQEILRTMSEH 97
>gi|295703980|ref|YP_003597055.1| hypothetical protein BMD_1852 [Bacillus megaterium DSM 319]
gi|294801639|gb|ADF38705.1| CBS domain protein [Bacillus megaterium DSM 319]
Length = 140
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
CT D + A K M N G++ V ++ V G+IT+RD + + G+ + D
Sbjct: 15 CTPHDPITAAAKLMRDINCGSVPVC---QENRVMGMITDRDIVLNCVADGKDCNTVHCHD 71
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGHML 162
MT++ +IT SPDT + ++M H +
Sbjct: 72 CMTKD--VITCSPDTDIHECARMMADHQI 98
>gi|134295527|ref|YP_001119262.1| XRE family transcriptional regulator [Burkholderia vietnamiensis
G4]
gi|387902047|ref|YP_006332386.1| hypothetical protein MYA_1291 [Burkholderia sp. KJ006]
gi|134138684|gb|ABO54427.1| putative transcriptional regulator, XRE family [Burkholderia
vietnamiensis G4]
gi|387576939|gb|AFJ85655.1| CBS domain protein [Burkholderia sp. KJ006]
Length = 151
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 59/102 (57%), Gaps = 10/102 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDKPLREAVDTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
++++ V G + +V +M E +T +P+T V ++M
Sbjct: 56 IQRLHVNGGAIGDVQVRKVMDEP---LTCTPETDVNEVRRMM 94
>gi|384265079|ref|YP_005420786.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|380498432|emb|CCG49470.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2]
Length = 147
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 10/93 (10%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D VY+A M +VGA+ +V + ++ GI+T+RD ++++G +SK S
Sbjct: 14 YCTVLDNVYEAAVKMKDADVGAIPIVDE-DGATLVGIVTDRD----LVLRGIASKKPNSQ 68
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ D MTE ++I+ D V + LM H L
Sbjct: 69 KITDAMTE--RVISAEEDASVEEVLHLMAEHQL 99
>gi|57640493|ref|YP_182971.1| hypothetical protein TK0558 [Thermococcus kodakarensis KOD1]
gi|57158817|dbj|BAD84747.1| hypothetical protein, conserved, containing CBS domains and PHD
finger motif [Thermococcus kodakarensis KOD1]
Length = 177
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDT++ + + ++ VG+ VVV E + + GIIT+RD L K++ +G+ K V D+MT
Sbjct: 20 DDTIHKVARILARNKVGSAVVVD--ENEEIVGIITDRDILDKVVAKGKDPKKVLVKDVMT 77
Query: 137 EENKLITVSPDTKVLRAMQLM 157
K +T+ D + A+ M
Sbjct: 78 --TKPVTIEDDYTIQDAIDKM 96
>gi|452976056|gb|EME75872.1| CBS domain-containing protein YhcV [Bacillus sonorensis L12]
Length = 141
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 6/84 (7%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+++ TV +A + M+QHNVGA+ VV G K G+IT+RD + QG+ + T V +
Sbjct: 15 VSSNQTVQEAAELMSQHNVGAIPVVDQGVLK---GMITDRDITLRTTAQGQDGQ-TPVSE 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLM 157
+MT +++ +PD + A QLM
Sbjct: 71 VMT--TNVVSGNPDMSLQEASQLM 92
>gi|91789393|ref|YP_550345.1| signal-transduction protein [Polaromonas sp. JS666]
gi|91698618|gb|ABE45447.1| putative signal-transduction protein with CBS domains [Polaromonas
sp. JS666]
Length = 146
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
++ ILK+K AD + V DAVK M + N+GAL+V+ GE+ GII+ERD
Sbjct: 4 VAQILKSK---ADHKVYTVSPLAPVLDAVKLMAEKNLGALLVLD-GEE--FVGIISERDC 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
RK+++ R + T V DIM+ + + V P M LMT
Sbjct: 58 TRKMLLADRLPRETPVRDIMS--SPVQYVGPRHTNEECMALMT 98
>gi|404421975|ref|ZP_11003678.1| hypothetical protein MFORT_16124 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403658419|gb|EJZ13153.1| hypothetical protein MFORT_16124 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 143
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 9/103 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+LK KG + + + + TV + + +T+ N+GA+VV+ P + +AGI++ERD
Sbjct: 3 IADVLKNKGT----AVVTISPETTVTELLAGLTELNIGAMVVMGP---EGLAGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+RK+ +G S + V +IMT + T +P V LMT
Sbjct: 56 VRKLHERGSSLLAQPVSEIMT--TVVATCTPRDTVDHLSALMT 96
>gi|367471309|ref|ZP_09470955.1| Cystathionine beta-synthase [Patulibacter sp. I11]
gi|365813617|gb|EHN08869.1| Cystathionine beta-synthase [Patulibacter sp. I11]
Length = 487
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 46 MEEHGF----ESTTISDILKAK-GKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKP 100
M EHGF T+ D+L+ K +G + V A+ + +H V L VV P
Sbjct: 342 MREHGFLERPPERTVGDVLRTKEAEGGVPQLVAVRPSHKVRQAIALLHEHGVSQLPVVSP 401
Query: 101 GEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTG 159
++ ++ G I ER LR+ + + ++GD+M E VS D V A++L+TG
Sbjct: 402 HDEHALVGSIGERGLLRRAASDPQVLDA-EIGDVM--EPPFPAVSADAPVREAVELLTG 457
>gi|229028522|ref|ZP_04184639.1| CBS domain protein [Bacillus cereus AH1271]
gi|228732740|gb|EEL83605.1| CBS domain protein [Bacillus cereus AH1271]
Length = 147
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++++G + K S
Sbjct: 21 VHCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVIRGIAEKHPGS 73
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +++VSPD + +A +LM + +
Sbjct: 74 NKITNVMT--TNIVSVSPDDSIEKATELMAQYQI 105
>gi|409402255|ref|ZP_11251845.1| CBS domain-containing protein [Acidocella sp. MX-AZ02]
gi|409129115|gb|EKM98982.1| CBS domain-containing protein [Acidocella sp. MX-AZ02]
Length = 143
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S ILK K G ++ D V V + + +GA++VV+ GE + GI++ERD
Sbjct: 3 VSAILKNKPPG----FVSVPADLPVSGVVSILAEKVIGAVLVVENGE---LIGILSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT-GHM 161
+R + + + S G +MT K+ T +P+T V +AM++MT GH
Sbjct: 56 VRTLATRAAGTLSMTAGALMTR--KITTGTPETTVEQAMEMMTNGHF 100
>gi|296119585|ref|ZP_06838143.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Corynebacterium ammoniagenes DSM 20306]
gi|295967468|gb|EFG80735.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Corynebacterium ammoniagenes DSM 20306]
Length = 618
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 62/106 (58%), Gaps = 13/106 (12%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
ST I D+ AK + C D ++ +A + M ++NV +L+V+ ++ ++ GIIT+
Sbjct: 151 STHIHDVKIAKPRS-------CPPDLSIREAAQRMEEYNVSSLLVL---DRDTLLGIITD 200
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
RD +++ +G + + V D+MT KL+T+S ++ + A+ LM+
Sbjct: 201 RDLRGRVVAEGIET-TCPVSDVMT--TKLLTLSSESLAMEALMLMS 243
>gi|424055385|ref|ZP_17792908.1| hypothetical protein W9I_01784 [Acinetobacter nosocomialis Ab22222]
gi|407438580|gb|EKF45123.1| hypothetical protein W9I_01784 [Acinetobacter nosocomialis Ab22222]
Length = 138
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K + A + + TV +A+ M + +GALVV E + V GI++ER
Sbjct: 2 TIVAQVIKNKSEQA---IFTISPEATVLEAITIMAEKGIGALVV---AEGEKVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DY RK+ + + V +IMT K+ITV + V +QLMT L LP
Sbjct: 56 DYTRKVTLMEPT-----VAEIMT--AKVITVGLNNTVEECLQLMTDRHLRHLP 101
>gi|423445393|ref|ZP_17422272.1| hypothetical protein IEC_00001 [Bacillus cereus BAG5O-1]
gi|401134097|gb|EJQ41715.1| hypothetical protein IEC_00001 [Bacillus cereus BAG5O-1]
Length = 139
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + V+ E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVL---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +++VSPD + +A +LM + +
Sbjct: 66 NKITNVMT--TNIVSVSPDDSIEKATELMAQYQI 97
>gi|228937988|ref|ZP_04100609.1| CBS domain protein [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228970865|ref|ZP_04131502.1| CBS domain protein [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228977469|ref|ZP_04137861.1| CBS domain protein [Bacillus thuringiensis Bt407]
gi|228782113|gb|EEM30299.1| CBS domain protein [Bacillus thuringiensis Bt407]
gi|228788674|gb|EEM36616.1| CBS domain protein [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228821614|gb|EEM67618.1| CBS domain protein [Bacillus thuringiensis serovar berliner ATCC
10792]
Length = 132
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 6 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 58
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+VSP+ + +A +LM + +
Sbjct: 59 NKITNVMT--TNIISVSPNDSIEKATELMAQYQI 90
>gi|374298367|ref|YP_005048558.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Clostridium clariflavum DSM 19732]
gi|359827861|gb|AEV70634.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Clostridium clariflavum DSM 19732]
Length = 139
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ +TV +A + M + NVG++ V +Q V G++T+RD + + + G+S + TKV
Sbjct: 13 YVKPTNTVVEAAQVMQKLNVGSVPVF---DQNKVVGMVTDRDIVVRNVAHGKSPQDTKVQ 69
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT +++ TV+PD +V ++M +
Sbjct: 70 DVMT--SQVTTVTPDMEVEEVSKIMAQQQI 97
>gi|452821296|gb|EME28328.1| putative signal-transduction protein containing cAMP-binding and
CBS domains isoform 2 [Galdieria sulphuraria]
Length = 348
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 13/121 (10%)
Query: 34 VSSRFESVSSARMEEHGFESTTISDIL-----KAKGKGADGSWLWCTTDDTVYDAVKSMT 88
++ F S+ A +EE FE + D+L K + + S L V DAV M
Sbjct: 176 LAQYFHSMEPAVVEE--FEHVLVKDMLDHNKSKVHERLNEQSILAVELSSQVKDAVHLMA 233
Query: 89 QHNVGALVVVKPGEQKS------VAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLI 142
++ VG ++V + + V G+ TER+Y+R +++G+ + +VGD+M L+
Sbjct: 234 KYGVGCVMVTSDHSKGALHPYPDVIGMFTEREYIRNCLLKGKDKDNCRVGDVMQSNMALV 293
Query: 143 T 143
T
Sbjct: 294 T 294
>gi|344341320|ref|ZP_08772241.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
gi|343798900|gb|EGV16853.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
Length = 480
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C D+++ AV+ M++ N+ ++VV +Q V G++T+RD K++ +GR +V D
Sbjct: 22 CEQDESLVAAVEMMSERNISSIVVCS--DQVPV-GMVTDRDLRNKVVARGRDPGELRVSD 78
Query: 134 IMTEENKLITVSPDTKVLRAMQLMT 158
IM + L+T+ + + A+ LM+
Sbjct: 79 IMN--SPLVTIGENDYLFEALHLMS 101
>gi|254739860|ref|ZP_05197552.1| CBS domain protein [Bacillus anthracis str. Kruger B]
Length = 139
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++ +RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVXDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+V+PD + +A +LM H +
Sbjct: 66 NKITNVMT--TNIISVAPDDSLEKATELMAQHQI 97
>gi|386757597|ref|YP_006230813.1| oxidoreductase [Bacillus sp. JS]
gi|384930879|gb|AFI27557.1| oxidoreductase [Bacillus sp. JS]
Length = 140
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ T+ +A M QHNVGA+ V EQ + G++T+RD + QGR + T V ++M+
Sbjct: 18 NQTIQEAASLMKQHNVGAIPV---AEQGVLKGMLTDRDIALRTTAQGRDGQ-TPVSEVMS 73
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML 162
E L++ +P+ + A QLM H +
Sbjct: 74 TE--LVSGNPNMSLEDASQLMAQHQI 97
>gi|146279621|ref|YP_001169779.1| hypothetical protein Rsph17025_3605 [Rhodobacter sphaeroides ATCC
17025]
gi|145557862|gb|ABP72474.1| hypothetical protein Rsph17025_3605 [Rhodobacter sphaeroides ATCC
17025]
Length = 139
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
W D V + + M ++GAL V G + G+IT+RD + +++ +GR K+TK
Sbjct: 13 WVEADTPVSEVARQMKADDIGALPV---GRDDRLIGMITDRDLVLRVLAEGRDPKTTKAS 69
Query: 133 DIMTE 137
D+MTE
Sbjct: 70 DVMTE 74
>gi|402815940|ref|ZP_10865532.1| hypothetical protein PAV_4c06160 [Paenibacillus alvei DSM 29]
gi|402506980|gb|EJW17503.1| hypothetical protein PAV_4c06160 [Paenibacillus alvei DSM 29]
Length = 141
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 12/87 (13%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---STK 130
CT D +Y+A M Q++ G + +V GE+ + G +T+RD ++++G +SK ST+
Sbjct: 15 CTVLDNIYEAAVKMKQYDTGFIPIVD-GER--LVGAVTDRD----LVLRGIASKHPGSTR 67
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLM 157
+ IMTEE L+++SPD + A LM
Sbjct: 68 ISHIMTEE--LVSISPDATIDEAAALM 92
>gi|385264621|ref|ZP_10042708.1| CBS domain-containing protein [Bacillus sp. 5B6]
gi|385149117|gb|EIF13054.1| CBS domain-containing protein [Bacillus sp. 5B6]
Length = 172
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 10/93 (10%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D VY+A M +VGA+ +V + ++ GI+T+RD ++++G +SK S
Sbjct: 39 YCTVLDNVYEAAVKMKDADVGAIPIVDE-DGATLVGIVTDRD----LVLRGIASKKPNSQ 93
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ D MTE ++I+ D V + LM H L
Sbjct: 94 KITDAMTE--RVISAEEDASVEEVLHLMAEHQL 124
>gi|374635448|ref|ZP_09707047.1| putative signal transduction protein with CBS domains
[Methanotorris formicicus Mc-S-70]
gi|373562321|gb|EHP88536.1| putative signal transduction protein with CBS domains
[Methanotorris formicicus Mc-S-70]
Length = 176
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D T YD M +N+G +VVV+ + GI+TERD + I+ + K + DIMT
Sbjct: 17 DTTAYDVANIMKDNNIGCVVVVEKDSKP--LGIVTERDLVINIVAKNLKPKDVLIKDIMT 74
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
KL+ +SP ++ A + MT
Sbjct: 75 --TKLVVISPTATLMDAAKKMT 94
>gi|229074433|ref|ZP_04207462.1| CBS domain protein [Bacillus cereus Rock4-18]
gi|228708553|gb|EEL60697.1| CBS domain protein [Bacillus cereus Rock4-18]
Length = 139
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + V+ E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVL---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +++VSPD + +A +LM + +
Sbjct: 66 NKITNVMT--TNIVSVSPDDSIEKATELMAQYQI 97
>gi|377820430|ref|YP_004976801.1| hypothetical protein BYI23_A009860 [Burkholderia sp. YI23]
gi|357935265|gb|AET88824.1| hypothetical protein BYI23_A009860 [Burkholderia sp. YI23]
Length = 150
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 9/105 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D V DAV +M H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKGN----TLFTVTPDTPVSDAVDTMAAHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
+ + G + +T + IM ++ +T +P+T V ++M H
Sbjct: 56 ILTLHNNGGAVGTTTIRKIM--DDHPLTCTPETDVNEVRRMMLEH 98
>gi|229095370|ref|ZP_04226361.1| CBS domain protein [Bacillus cereus Rock3-29]
gi|229114321|ref|ZP_04243739.1| CBS domain protein [Bacillus cereus Rock1-3]
gi|423381315|ref|ZP_17358599.1| hypothetical protein IC9_04668 [Bacillus cereus BAG1O-2]
gi|423444341|ref|ZP_17421247.1| hypothetical protein IEA_04671 [Bacillus cereus BAG4X2-1]
gi|423467434|ref|ZP_17444202.1| hypothetical protein IEK_04621 [Bacillus cereus BAG6O-1]
gi|423536833|ref|ZP_17513251.1| hypothetical protein IGI_04665 [Bacillus cereus HuB2-9]
gi|423537909|ref|ZP_17514300.1| hypothetical protein IGK_00001 [Bacillus cereus HuB4-10]
gi|423544132|ref|ZP_17520490.1| hypothetical protein IGO_00567 [Bacillus cereus HuB5-5]
gi|423620334|ref|ZP_17596145.1| hypothetical protein IIO_05637 [Bacillus cereus VD115]
gi|423626140|ref|ZP_17601918.1| hypothetical protein IK3_04738 [Bacillus cereus VD148]
gi|228669000|gb|EEL24424.1| CBS domain protein [Bacillus cereus Rock1-3]
gi|228687916|gb|EEL41803.1| CBS domain protein [Bacillus cereus Rock3-29]
gi|401178423|gb|EJQ85601.1| hypothetical protein IGK_00001 [Bacillus cereus HuB4-10]
gi|401184485|gb|EJQ91585.1| hypothetical protein IGO_00567 [Bacillus cereus HuB5-5]
gi|401248132|gb|EJR54455.1| hypothetical protein IIO_05637 [Bacillus cereus VD115]
gi|401253057|gb|EJR59303.1| hypothetical protein IK3_04738 [Bacillus cereus VD148]
gi|401630224|gb|EJS48032.1| hypothetical protein IC9_04668 [Bacillus cereus BAG1O-2]
gi|402411480|gb|EJV43848.1| hypothetical protein IEA_04671 [Bacillus cereus BAG4X2-1]
gi|402414027|gb|EJV46364.1| hypothetical protein IEK_04621 [Bacillus cereus BAG6O-1]
gi|402460731|gb|EJV92450.1| hypothetical protein IGI_04665 [Bacillus cereus HuB2-9]
Length = 139
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + V+ E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVL---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +++VSPD + +A +LM + +
Sbjct: 66 NKITNVMT--TNIVSVSPDDSIEKATELMAQYQI 97
>gi|407773810|ref|ZP_11121110.1| hypothetical protein TH2_07911 [Thalassospira profundimaris WP0211]
gi|407283256|gb|EKF08797.1| hypothetical protein TH2_07911 [Thalassospira profundimaris WP0211]
Length = 149
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D+V DAV M + +GA+++V +AGI TERD + +++ +G + S + +MT
Sbjct: 22 DSVMDAVTMMAERKIGAVIIVD--NNARLAGIFTERDLVNRVVAKGLDAASVPLSKVMTA 79
Query: 138 ENKLITVSPDTKVLRAMQLMTGH 160
+ T+ P+ + A+ LM+
Sbjct: 80 DPD--TLGPNDSAMSALDLMSAR 100
>gi|398309985|ref|ZP_10513459.1| CBS domain pair sporulation protein YhcV [Bacillus mojavensis
RO-H-1]
Length = 140
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ T+ +A M QHNVGA+ VV EQ + G++T+RD + QGR + T V ++M+
Sbjct: 18 NQTIQEAASLMKQHNVGAIPVV---EQGVLKGMLTDRDIALRTTAQGRDGQ-TPVSEVMS 73
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML 162
+ L++ +P+ + A QLM H +
Sbjct: 74 TD--LVSGNPNMSLEDASQLMAQHQI 97
>gi|384184785|ref|YP_005570681.1| inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
serovar chinensis CT-43]
gi|410673075|ref|YP_006925446.1| uncharacterized protein YlbB [Bacillus thuringiensis Bt407]
gi|452197086|ref|YP_007477167.1| CBS domain-containing protein [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|326938494|gb|AEA14390.1| inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
serovar chinensis CT-43]
gi|409172204|gb|AFV16509.1| uncharacterized protein YlbB [Bacillus thuringiensis Bt407]
gi|452102479|gb|AGF99418.1| CBS domain-containing protein [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 139
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+VSP+ + +A +LM + +
Sbjct: 66 NKITNVMT--TNIISVSPNDSIEKATELMAQYQI 97
>gi|269126481|ref|YP_003299851.1| putative signal transduction protein with CBS domains
[Thermomonospora curvata DSM 43183]
gi|268311439|gb|ACY97813.1| putative signal transduction protein with CBS domains
[Thermomonospora curvata DSM 43183]
Length = 142
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I DIL+ KG S TV + + + + N+GA+VV G ++AGI++ERD
Sbjct: 3 IRDILRTKGS----SVATVEPTATVRELLAKLAELNIGAVVVSPDG--ATIAGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
+R++ +G + V DIMT E + T +P+ V + MT H +
Sbjct: 57 VRRLHERGAALLDAPVSDIMTAEVR--TCAPEAAVDELRKTMTEHRI 101
>gi|296332343|ref|ZP_06874804.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305673622|ref|YP_003865294.1| oxidoreductase [Bacillus subtilis subsp. spizizenii str. W23]
gi|296150261|gb|EFG91149.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305411866|gb|ADM36985.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 140
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ T+ +A M QHNVGA+ VV EQ + G++T+RD + QGR + T V ++M+
Sbjct: 18 NQTIQEAASLMKQHNVGAIPVV---EQGVLKGMLTDRDIALRTTAQGRDGQ-TPVSEVMS 73
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML 162
+ L++ +P+ + A QLM H +
Sbjct: 74 TD--LVSGNPNMSLEDASQLMAQHQI 97
>gi|407703237|ref|YP_006826822.1| hypothetical protein MC28_0001 [Bacillus thuringiensis MC28]
gi|407380922|gb|AFU11423.1| CBS domain protein [Bacillus thuringiensis MC28]
Length = 139
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + V+ E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVL---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +++VSPD + +A +LM + +
Sbjct: 66 NKITNVMT--TNIVSVSPDDSIEKATELMAQYQI 97
>gi|229101483|ref|ZP_04232221.1| CBS domain protein [Bacillus cereus Rock3-28]
gi|228681933|gb|EEL36072.1| CBS domain protein [Bacillus cereus Rock3-28]
Length = 139
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + V+ E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVL---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +++VSPD + +A +LM + +
Sbjct: 66 NKITNVMT--TNIVSVSPDDSIEKATELMAQYQI 97
>gi|404488987|ref|YP_006713093.1| protein YlbB [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52347974|gb|AAU40608.1| YlbB [Bacillus licheniformis DSM 13 = ATCC 14580]
Length = 141
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGAL-VVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
L+CT D VY+A M +VGA+ VV+ G + + GI+T+RD + + I + S K
Sbjct: 6 LYCTVLDNVYEAAVKMKDGDVGAIPVVLDDGLE--LVGIVTDRDLVLRGIA-AKKPNSQK 62
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
+ ++MT + LITVS D + +A+ LM + +
Sbjct: 63 ITNVMTTD--LITVSEDDSIEKAVDLMGDYQI 92
>gi|402562251|ref|YP_006604975.1| inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
HD-771]
gi|423360835|ref|ZP_17338337.1| hypothetical protein IC1_02814 [Bacillus cereus VD022]
gi|401081176|gb|EJP89454.1| hypothetical protein IC1_02814 [Bacillus cereus VD022]
gi|401790903|gb|AFQ16942.1| inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
HD-771]
Length = 139
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+VSP+ + +A +LM + +
Sbjct: 66 NKITNVMT--TNIISVSPNDSIEKATELMAQYQI 97
>gi|218895774|ref|YP_002444185.1| hypothetical protein BCG9842_B4559 [Bacillus cereus G9842]
gi|423564899|ref|ZP_17541175.1| hypothetical protein II5_04303 [Bacillus cereus MSX-A1]
gi|434373765|ref|YP_006608409.1| hypothetical protein BTF1_01320 [Bacillus thuringiensis HD-789]
gi|218540734|gb|ACK93128.1| CBS domain protein [Bacillus cereus G9842]
gi|401195382|gb|EJR02342.1| hypothetical protein II5_04303 [Bacillus cereus MSX-A1]
gi|401872322|gb|AFQ24489.1| hypothetical protein BTF1_01320 [Bacillus thuringiensis HD-789]
Length = 139
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+VSP+ + +A +LM + +
Sbjct: 66 NKITNVMT--TNIISVSPNDSIEKATELMAQYQI 97
>gi|20093426|ref|NP_619501.1| hypothetical protein MA4647 [Methanosarcina acetivorans C2A]
gi|19918800|gb|AAM07981.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 209
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 85 KSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITV 144
+ MTQ+NVG++++ + + GIITERD ++ I+ + R + +I++ L+TV
Sbjct: 46 REMTQNNVGSVIITQ---NEKAMGIITERDLVKGIVAENRKPREVNASEILS--TPLLTV 100
Query: 145 SPDTKVLRAMQLM 157
P T +++A ++M
Sbjct: 101 EPGTSIVKASEIM 113
>gi|452854892|ref|YP_007496575.1| putative oxidoreductase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|452079152|emb|CCP20905.1| putative oxidoreductase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 140
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVGA+ VV GE K G++T+RD + QGR + T V
Sbjct: 15 VSPNQTIQEAAALMHQHNVGAIPVVDGGELK---GMLTDRDIALRTTAQGRDGQ-TPVSH 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
+M+ E +++ +P+ + A LM H + LP
Sbjct: 71 VMSSE--VVSGNPEMSLEEASHLMAQHQIRRLP 101
>gi|451981720|ref|ZP_21930068.1| hypothetical protein NITGR_620030 [Nitrospina gracilis 3/211]
gi|451761068|emb|CCQ91333.1| hypothetical protein NITGR_620030 [Nitrospina gracilis 3/211]
Length = 136
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
++DIL+ G L ++ +V DA M Q++VG+L+V + GE GI+TERD+
Sbjct: 1 MTDILEEVGNFMSSPVLRIDSEASVQDAAILMEQNHVGSLIVEQYGED---IGILTERDF 57
Query: 116 LRKIIVQGRSSKSTKVGDIMT 136
+K++ +G++ + K +IM+
Sbjct: 58 TQKVLSKGKNPEEIKATEIMS 78
>gi|386001249|ref|YP_005919548.1| Putative signal-transduction protein with CBS domains [Methanosaeta
harundinacea 6Ac]
gi|357209305|gb|AET63925.1| Putative signal-transduction protein with CBS domains [Methanosaeta
harundinacea 6Ac]
Length = 139
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV++A++ M + G+++VV+ G K V GI+T R++ +G ++ V ++MT
Sbjct: 11 ETTVFEAIQMMVREGKGSVLVVEGGLLKEVVGIVTTSGLFRQVFAKGIDPRNVVVWEVMT 70
Query: 137 EENKLITVSPDTKVLRAMQLMTGH 160
L+T+ P+ RA ++M H
Sbjct: 71 PA-PLVTIGPNETTRRAAEMMLEH 93
>gi|315427081|dbj|BAJ48697.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
gi|315427113|dbj|BAJ48728.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
gi|343485746|dbj|BAJ51400.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
Length = 140
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+VY A K M + VG+LVV GE+ G++TERD +R+++ G S + T V D+MT
Sbjct: 24 SVYAAAKIMAEEEVGSLVV-TVGEKP--VGVLTERDVVRRVVAAGLSPRRTSVEDVMT-- 78
Query: 139 NKLITVSPDTKVLRAMQLMTGH 160
+ ++ V +T + A+ +M +
Sbjct: 79 SPVVVVGENTSLEEAVAIMASN 100
>gi|205375600|ref|ZP_03228387.1| hypothetical protein Bcoam_21763 [Bacillus coahuilensis m4-4]
Length = 137
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
CT D VY+A M +HN+G++ +V + + G+IT+RD + K I + + + S+++ D
Sbjct: 14 CTLLDNVYEAAVLMKEHNIGSVPIV---DGSKLVGMITDRDIVIKGIAEKKPN-SSRIQD 69
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
+M+ +ITV+ D +A+++M H + LP
Sbjct: 70 LMS--TNIITVTADCTTDKALEIMKEHQIRRLP 100
>gi|52840978|ref|YP_094777.1| hypothetical protein lpg0741 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52628089|gb|AAU26830.1| hypothetical protein lpg0741 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 174
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ DD+V + +K M + ++GALVV + GI++ERD LR + S ++ KV
Sbjct: 48 YIHPDDSVKECIKQMVEKDIGALVVF--DNDAHLIGIVSERDILRCYFHKSLSLETAKVS 105
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMT 158
D++ + +SP V +AMQ++T
Sbjct: 106 DVVY--TNVTILSPHDSVEKAMQVIT 129
>gi|311068012|ref|YP_003972935.1| oxidoreductase [Bacillus atrophaeus 1942]
gi|419824011|ref|ZP_14347542.1| putative oxidoreductase [Bacillus atrophaeus C89]
gi|310868529|gb|ADP32004.1| putative oxidoreductase [Bacillus atrophaeus 1942]
gi|388471826|gb|EIM08618.1| putative oxidoreductase [Bacillus atrophaeus C89]
Length = 149
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+CT D VY+A M +VGA+ VV + +++ GI+T+RD + + I R + S K+
Sbjct: 14 YCTVLDNVYEAAVKMKDADVGAVPVVDE-DGETLVGIVTDRDLVLRGIASKRPN-SQKIT 71
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D MT+E ++V DT V + LM L
Sbjct: 72 DAMTKEP--VSVEEDTSVDEVLHLMAARQL 99
>gi|154246304|ref|YP_001417262.1| signal-transduction protein [Xanthobacter autotrophicus Py2]
gi|154160389|gb|ABS67605.1| putative signal-transduction protein with CBS domains [Xanthobacter
autotrophicus Py2]
Length = 143
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
Query: 55 TISDILKAKGKGADGSWLWCTT--DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
T+S IL KG CT D TV DAV + +GA+VVV + SV GII+E
Sbjct: 2 TVSVILSRKGND------ICTIGPDATVGDAVARLAGRRIGAIVVVD--DAMSVEGIISE 53
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
RD +R I QG + + + +MT ++T +PD V M+ MT
Sbjct: 54 RDVVRLIGEQGVNVLAEPLSSVMT--RAVVTCTPDETVPVIMERMT 97
>gi|159044294|ref|YP_001533088.1| hypothetical protein Dshi_1745 [Dinoroseobacter shibae DFL 12]
gi|157912054|gb|ABV93487.1| hypothetical protein Dshi_1745 [Dinoroseobacter shibae DFL 12]
Length = 144
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILK+K A + D +V DA K ++ +G++VV G K+ GI++ERD
Sbjct: 3 VHQILKSK---ASAEVVTIGPDASVADAAKVLSLRKIGSVVVSSNG--KTADGILSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R++ V+G + VG++MT + L+T PD + + MT
Sbjct: 58 VREVGVRGAGCLTETVGNMMTRD--LVTCGPDESADKVLMQMT 98
>gi|52080098|ref|YP_078889.1| hypothetical protein BL02985 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319646127|ref|ZP_08000357.1| YlbB protein [Bacillus sp. BT1B_CT2]
gi|423682036|ref|ZP_17656875.1| hypothetical protein MUY_01863 [Bacillus licheniformis WX-02]
gi|52003309|gb|AAU23251.1| YlbB [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|317391877|gb|EFV72674.1| YlbB protein [Bacillus sp. BT1B_CT2]
gi|383438810|gb|EID46585.1| hypothetical protein MUY_01863 [Bacillus licheniformis WX-02]
Length = 148
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGAL-VVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
L+CT D VY+A M +VGA+ VV+ G + + GI+T+RD + + I + S K
Sbjct: 13 LYCTVLDNVYEAAVKMKDGDVGAIPVVLDDGLE--LVGIVTDRDLVLRGIA-AKKPNSQK 69
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
+ ++MT + LITVS D + +A+ LM + +
Sbjct: 70 ITNVMTTD--LITVSEDDSIEKAVDLMGDYQI 99
>gi|407780598|ref|ZP_11127819.1| signal transduction protein with CBS domains [Oceanibaculum indicum
P24]
gi|407208825|gb|EKE78732.1| signal transduction protein with CBS domains [Oceanibaculum indicum
P24]
Length = 140
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV +A K M +H +GA++VV E+K GI T RD + +++ +G + T + +MT +
Sbjct: 23 TVLEACKIMQKHRIGAIIVVD--EEKRPVGIFTGRDAVNRVLAKGLDGRRTLLSAVMTAK 80
Query: 139 NKLITVSPDTKVLRAMQLMT--GHMLLP 164
VSPD L A++ M+ G+ LP
Sbjct: 81 PD--CVSPDWVTLDALRQMSDCGYRHLP 106
>gi|387927162|ref|ZP_10129841.1| inosine-5'-monophosphate dehydrogenase related protein [Bacillus
methanolicus PB1]
gi|387589306|gb|EIJ81626.1| inosine-5'-monophosphate dehydrogenase related protein [Bacillus
methanolicus PB1]
Length = 143
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C+ D +Y+ M NVGA+ VV G+ + G+IT+RD + + I + ++ S+KV +
Sbjct: 15 CSLLDNIYEVAVKMKDLNVGAIPVVDNGK---LVGMITDRDIVLRCIAE-KNPPSSKVEE 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGHML 162
+M+ +L+TV+P++ A QLM + +
Sbjct: 71 VMS--RQLVTVTPESSTREAAQLMAKNQI 97
>gi|397689681|ref|YP_006526935.1| signal-transduction protein with CBS domains [Melioribacter roseus
P3M]
gi|395811173|gb|AFN73922.1| putative signal-transduction protein with CBS domains
[Melioribacter roseus P3M]
Length = 142
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 76 TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
T +V DAV M +HN+G LV V E K V G+ +ERD ++++I +G + STK+ D+M
Sbjct: 18 TGTSVADAVSFMAEHNIG-LVPVLDDEGKLV-GVFSERDLVKRVIAKGLNINSTKIDDVM 75
Query: 136 TEE 138
T E
Sbjct: 76 TRE 78
>gi|375083205|ref|ZP_09730235.1| hypothetical protein OCC_11512 [Thermococcus litoralis DSM 5473]
gi|374742159|gb|EHR78567.1| hypothetical protein OCC_11512 [Thermococcus litoralis DSM 5473]
Length = 136
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 9/91 (9%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+DTV +A K M ++G+LVV+ E+ +V G T+ D +R++IV G +T V +IMT
Sbjct: 21 EDTVQEACKVMVDFDIGSLVVI--DEKDNVVGFFTKSDIIRRVIVPGLPY-TTPVKEIMT 77
Query: 137 EENKLITVSPDTKVLRAMQLMTG----HMLL 163
++ LITV +T + +++M H+L+
Sbjct: 78 KD--LITVDTNTPLKEVLKIMAAKRIKHILV 106
>gi|423531281|ref|ZP_17507726.1| hypothetical protein IGE_04833 [Bacillus cereus HuB1-1]
gi|402444586|gb|EJV76468.1| hypothetical protein IGE_04833 [Bacillus cereus HuB1-1]
Length = 139
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVIGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+VSP+ + +A +LM + +
Sbjct: 66 NKITNVMT--TNIISVSPNDSIEKATELMAQYQI 97
>gi|284162404|ref|YP_003401027.1| signal transduction protein [Archaeoglobus profundus DSM 5631]
gi|284012401|gb|ADB58354.1| putative signal transduction protein with CBS domains
[Archaeoglobus profundus DSM 5631]
Length = 177
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 74 CTT--DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
CT DDT+ A K M + VG++VV++ G GI+TE+D L K++ + + K+
Sbjct: 16 CTARKDDTLLTASKKMIKFGVGSVVVIEDGRP---IGIVTEKDILYKVVSKNKLPSKVKL 72
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLM 157
DIM+ LIT+ P T + A +M
Sbjct: 73 KDIMS--TPLITIKPTTSLREAADIM 96
>gi|163792664|ref|ZP_02186641.1| putative signal-transduction protein with CBS domains [alpha
proteobacterium BAL199]
gi|159182369|gb|EDP66878.1| putative signal-transduction protein with CBS domains [alpha
proteobacterium BAL199]
Length = 142
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK+KG + V DA + + + +G+++++ E+ VAGI++ERD
Sbjct: 3 VSDILKSKGSAV----VTAPPSMPVADAARLLAEKRIGSILIL---ERNKVAGILSERDI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R + +G V +MT K++T +P + MQ+MT
Sbjct: 56 VRALANEGAGCLDGPVSRLMTA--KVVTCTPAQTIADVMQMMT 96
>gi|341581333|ref|YP_004761825.1| hypothetical protein GQS_01225 [Thermococcus sp. 4557]
gi|340808991|gb|AEK72148.1| hypothetical protein GQS_01225 [Thermococcus sp. 4557]
Length = 136
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
Query: 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
+ + +D+V A + M + ++G+LVVV E+ V G T+ D +R++++ G S+ T
Sbjct: 16 LIGVSPNDSVKRACEVMVEFDIGSLVVV---EENRVVGFFTKSDIIRRVVIPGLSN-GTP 71
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLM----TGHMLL 163
V +IM+ E LITV +T V + LM HML+
Sbjct: 72 VREIMSRE--LITVDANTPVRDVLDLMAKKGVKHMLI 106
>gi|271964532|ref|YP_003338728.1| signal-transduction protein [Streptosporangium roseum DSM 43021]
gi|270507707|gb|ACZ85985.1| signal-transduction protein [Streptosporangium roseum DSM 43021]
Length = 142
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 6/98 (6%)
Query: 63 KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122
+GKG D + + + TV + ++ + +HN+GA+VV + G S+AGI++ERD +R++ +
Sbjct: 8 QGKGTDVTTVH--PEATVTELLELLAEHNIGAVVVSEDG--SSIAGIVSERDVVRRLNDR 63
Query: 123 GRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
G + V IMT + + T P V Q MT H
Sbjct: 64 GADVLTAPVSSIMTTDVR--TCPPTANVDDLRQTMTTH 99
>gi|15607061|ref|NP_214443.1| hypothetical protein aq_2107 [Aquifex aeolicus VF5]
gi|2984323|gb|AAC07845.1| hypothetical protein aq_2107 [Aquifex aeolicus VF5]
Length = 619
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
++VY+AVK M + N +V E+ GIITERD L+K+I + + K KV ++MT
Sbjct: 170 ESVYEAVKKMVEDNSSCAIVKSEDEE----GIITERDVLKKVIYRDLNPKEVKVKEVMT- 224
Query: 138 ENKLITVSP 146
+ LI+V P
Sbjct: 225 -SPLISVEP 232
>gi|95930304|ref|ZP_01313041.1| cyclic nucleotide-binding protein [Desulfuromonas acetoxidans DSM
684]
gi|95133556|gb|EAT15218.1| cyclic nucleotide-binding protein [Desulfuromonas acetoxidans DSM
684]
Length = 637
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 66/119 (55%), Gaps = 13/119 (10%)
Query: 45 RMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQK 104
+ME + F+ +S+I+ A L C T+ + + + M+QH V ++VV G
Sbjct: 152 QMESYPFKKR-LSEIMSAP-------VLHCRTEASAREIAELMSQHQVRSVVVTDDG--G 201
Query: 105 SVAGIITERDYLRKII-VQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
S+ G++T RD + K++ ++G +++ ++M E+ +++SP T + AM M+GH L
Sbjct: 202 SMVGMVTCRDVIGKVLAIKGADAETITASELMAEDP--VSMSPQTYMYEAMAYMSGHKL 258
>gi|385681865|ref|ZP_10055793.1| signal transduction protein [Amycolatopsis sp. ATCC 39116]
Length = 138
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 76 TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
T DTV DA K M + VGA+ + GE + G++T+RD + K++ +G+ ++ G++
Sbjct: 17 TSDTVLDAAKRMAELQVGAMPIC--GEDNRLKGMLTDRDIVVKVLAEGKDPRAVNAGELA 74
Query: 136 TEENKLITVSPDTK-VLRAM 154
E I D K +LR M
Sbjct: 75 QGEAVTIGADDDAKEILRTM 94
>gi|226359682|ref|YP_002777460.1| hypothetical protein ROP_02680 [Rhodococcus opacus B4]
gi|226238167|dbj|BAH48515.1| hypothetical protein [Rhodococcus opacus B4]
Length = 142
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG + + + +V + + +HNVGALVV E +V GI+TERD
Sbjct: 3 ISDVLRNKGP----AVVTVDPEMSVSTLIGELARHNVGALVVT---ENDAVVGIVTERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMT 136
+R+I +G + +V DIMT
Sbjct: 56 VRRIHERGPDILNARVVDIMT 76
>gi|423474437|ref|ZP_17451176.1| hypothetical protein IEM_05738 [Bacillus cereus BAG6O-2]
gi|402423201|gb|EJV55420.1| hypothetical protein IEM_05738 [Bacillus cereus BAG6O-2]
Length = 139
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + V+ E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVI---ENQQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
++ ++MT +++VSPD + +A +LM + +
Sbjct: 66 NQITNVMT--TNIVSVSPDDSIEKATELMAQYQI 97
>gi|228983923|ref|ZP_04144113.1| CBS domain protein [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|229154423|ref|ZP_04282540.1| CBS domain protein [Bacillus cereus ATCC 4342]
gi|228628821|gb|EEK85531.1| CBS domain protein [Bacillus cereus ATCC 4342]
gi|228775743|gb|EEM24119.1| CBS domain protein [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 147
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 21 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 73
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +++++PD + +A +LM + +
Sbjct: 74 NKITNVMT--TNIVSIAPDDSIEKATELMAQYQI 105
>gi|288920279|ref|ZP_06414592.1| putative signal transduction protein with CBS domains [Frankia sp.
EUN1f]
gi|288348303|gb|EFC82567.1| putative signal transduction protein with CBS domains [Frankia sp.
EUN1f]
Length = 139
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D+T+ +A ++M + G ++VV GE + GI+T+RD + +I+ + R + + KV + +
Sbjct: 19 DETLAEAARTMRETEAGDVLVVDDGE---LVGILTDRDIVVRIVAEDRDTSAAKVSEACS 75
Query: 137 EENKLITVSPDTKVLRAMQLM 157
E L TV+PDT + A +LM
Sbjct: 76 TE--LETVTPDTLIDDAAELM 94
>gi|392417205|ref|YP_006453810.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium chubuense NBB4]
gi|390616981|gb|AFM18131.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium chubuense NBB4]
Length = 151
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG + T + +V + ++ HN+GA+VVV P + GI++ERD
Sbjct: 12 ISDVLRNKG----ATVATITPETSVAGLLTELSVHNIGAMVVVSP---DGLQGIVSERDV 64
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+RK+ G V DIMT + T SPD V LMT
Sbjct: 65 VRKLHEIGPDLLRRPVSDIMT--TLVATCSPDDSVDSLSALMT 105
>gi|379706287|ref|YP_005261492.1| hypothetical protein NOCYR_0023 [Nocardia cyriacigeorgica GUH-2]
gi|374843786|emb|CCF60848.1| conserved protein of unknown function; putative CBS domain
[Nocardia cyriacigeorgica GUH-2]
Length = 139
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT DI+K + W + D TV A + M + VG+LV+ E + + GIIT+R
Sbjct: 2 TTARDIMKPGAQ-------WISRDQTVAQAARVMAELGVGSLVIAD--ENERMCGIITDR 52
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDT-KVLRAMQ 155
D + K I QG S T+ ++ + I+ D +VL M+
Sbjct: 53 DIVVKCIAQGLSPSGTRAAELCEATPRWISADADVDEVLDEME 95
>gi|392381931|ref|YP_005031128.1| conserved hypothetical protein with 2 CBS domains [Azospirillum
brasilense Sp245]
gi|356876896|emb|CCC97689.1| conserved hypothetical protein with 2 CBS domains [Azospirillum
brasilense Sp245]
Length = 145
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T +S++L KG S L +++ A +++T +GALVV + +AGI++ER
Sbjct: 2 TVVSEVLNRKGHNV-ASIL---PSESIRTAARTLTDRRIGALVVCD--RRGRLAGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
D +R + + G + V D+MT + K T P+ + MQ+MT
Sbjct: 56 DIVRAVAMHGADALDMPVEDLMTRQVK--TCRPEDTIKDLMQMMT 98
>gi|429192943|ref|YP_007178621.1| hypothetical protein Natgr_3038 [Natronobacterium gregoryi SP2]
gi|448326790|ref|ZP_21516134.1| signal transduction protein with CBS domains [Natronobacterium
gregoryi SP2]
gi|429137161|gb|AFZ74172.1| putative transcriptional regulator, contains C-terminal CBS domains
[Natronobacterium gregoryi SP2]
gi|445609841|gb|ELY63627.1| signal transduction protein with CBS domains [Natronobacterium
gregoryi SP2]
Length = 140
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ TTD+++ + +M NVG+ VV+ G++ AGI+T+RD ++I +G S+
Sbjct: 12 VTATTDESIQEIAATMAAENVGS-VVITDGDEP--AGIVTDRDLTLQVIAEGESADGMTA 68
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGH 160
D+M+ L T+ D A +LM+ H
Sbjct: 69 EDVMS--TDLCTIEHDGGFYEATELMSEH 95
>gi|54296767|ref|YP_123136.1| hypothetical protein lpp0806 [Legionella pneumophila str. Paris]
gi|53750552|emb|CAH11954.1| hypothetical protein lpp0806 [Legionella pneumophila str. Paris]
Length = 144
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ DD+V + +K M + ++GALVV + GI++ERD LR + S ++ KV
Sbjct: 18 YIHPDDSVKECIKQMVEKDIGALVVF--DNDAHLIGIVSERDILRCYFHKSLSLETAKVS 75
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMT 158
D++ + +SP V +AMQ++T
Sbjct: 76 DVVY--TNVTILSPHDSVEKAMQVIT 99
>gi|410090838|ref|ZP_11287422.1| hypothetical protein AAI_09261 [Pseudomonas viridiflava UASWS0038]
gi|409761880|gb|EKN46924.1| hypothetical protein AAI_09261 [Pseudomonas viridiflava UASWS0038]
Length = 146
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V DA++ M + N+GAL VV+ V G+++ERD
Sbjct: 3 TVAQLLKLKAE-HNQQVHTIGPDHMVLDALRLMAEKNIGALPVVE---NGVVVGVMSERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
Y RK+I++GRSS T V IM+ +K+ITV V M +MT
Sbjct: 59 YARKMILKGRSSVGTPVSAIMS--SKVITVDSQQTVEACMGIMT 100
>gi|47564653|ref|ZP_00235697.1| CBS domain protein [Bacillus cereus G9241]
gi|47558026|gb|EAL16350.1| CBS domain protein [Bacillus cereus G9241]
Length = 139
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +++++PD + +A +LM + +
Sbjct: 66 NKITNVMT--TNIVSIAPDDSIEKATELMAQYQI 97
>gi|160932207|ref|ZP_02079598.1| hypothetical protein CLOLEP_01042 [Clostridium leptum DSM 753]
gi|156868809|gb|EDO62181.1| CBS domain protein [Clostridium leptum DSM 753]
Length = 149
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
DT+ +A + M +H+VG L VV GE K G++T+RD + + + G+ K IMT+
Sbjct: 20 DTLEEAARLMKEHDVGVLPVVSGGELK---GLVTDRDIVLQCVAAGKEPSQVKAYQIMTK 76
Query: 138 ENKLITVSPDTKVLRAMQLM 157
+ +++VSP V A +LM
Sbjct: 77 D--VVSVSPGHTVSEAARLM 94
>gi|452855446|ref|YP_007497129.1| putative oxidoreductase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|452079706|emb|CCP21463.1| putative oxidoreductase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 147
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 10/93 (10%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D VY+A M +VGA+ +V + ++ GI+T+RD ++++G +SK S
Sbjct: 14 YCTVLDNVYEAAVKMKDADVGAIPIVDE-DGATLVGIVTDRD----LVLRGIASKKPNSQ 68
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ D MTE ++I+ D V + LM H L
Sbjct: 69 KITDAMTE--RVISAEVDASVEEVLHLMAEHQL 99
>gi|423455738|ref|ZP_17432591.1| hypothetical protein IEE_04482 [Bacillus cereus BAG5X1-1]
gi|401134375|gb|EJQ41992.1| hypothetical protein IEE_04482 [Bacillus cereus BAG5X1-1]
Length = 139
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + V+ E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVI---ENQQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
++ ++MT +++VSPD + +A +LM + +
Sbjct: 66 NQITNVMT--TNIVSVSPDDSIEKATELMAQYQI 97
>gi|312795956|ref|YP_004028878.1| hypothetical protein RBRH_02954 [Burkholderia rhizoxinica HKI 454]
gi|312167731|emb|CBW74734.1| CBS domain containing protein [Burkholderia rhizoxinica HKI 454]
Length = 196
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 66/116 (56%), Gaps = 13/116 (11%)
Query: 52 ESTTISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGII 110
E+ +SDILK KG L+ T DT + +AV++M +H++G+LVV++ G+ + G++
Sbjct: 43 EAMRVSDILKVKGNA-----LYTVTPDTPLSEAVQTMAEHDIGSLVVIEFGD---LVGML 94
Query: 111 TERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKV--LRAMQLMTGHMLLP 164
T R+ + + +G S + + +M ++ +T +P+T + +R M L LP
Sbjct: 95 TFREIILTLRDRGGSVDAVTIRKVM--DDHPLTCTPETDINEVRRMMLERHARYLP 148
>gi|84684721|ref|ZP_01012621.1| CBS domain-containing protein [Maritimibacter alkaliphilus
HTCC2654]
gi|84667056|gb|EAQ13526.1| CBS domain-containing protein [Maritimibacter alkaliphilus
HTCC2654]
Length = 144
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S ILK K A+ L T D +V DA +++ VGA++V + G GI++ERD
Sbjct: 3 VSQILKDK---ANQGVLTVTKDTSVADASAILSREKVGAVIVSEDGVHPQ--GIVSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R++ +G + V IMTE KLI P + + +Q MT
Sbjct: 58 VRELGARGTGCLTDPVSAIMTE--KLIGCVPGDRAIAVLQKMT 98
>gi|423556377|ref|ZP_17532680.1| hypothetical protein II3_01582 [Bacillus cereus MC67]
gi|401195566|gb|EJR02522.1| hypothetical protein II3_01582 [Bacillus cereus MC67]
Length = 139
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + V+ E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVI---ENQQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
++ ++MT +++VSPD + +A +LM + +
Sbjct: 66 NQITNVMT--TNIVSVSPDDSIEKATELMAQYQI 97
>gi|423382255|ref|ZP_17359511.1| hypothetical protein ICE_00001 [Bacillus cereus BAG1X1-2]
gi|401644946|gb|EJS62623.1| hypothetical protein ICE_00001 [Bacillus cereus BAG1X1-2]
Length = 139
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVIGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT +I+VSP+ + +A +LM + +
Sbjct: 66 NKITNVMT--TNIISVSPNDSIEKATELMAQYQI 97
>gi|407641205|ref|YP_006804964.1| hypothetical protein O3I_000135 [Nocardia brasiliensis ATCC 700358]
gi|407304089|gb|AFT97989.1| hypothetical protein O3I_000135 [Nocardia brasiliensis ATCC 700358]
Length = 139
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT DI+K + W D+TV A + M + VG+LV+ ++ + GIIT+R
Sbjct: 2 TTARDIMKPGAQ-------WIAKDETVGKAARVMAELGVGSLVIADDNDR--MCGIITDR 52
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPD-TKVLRAMQ 155
D + K I QGRS +T+ ++ + + D +VL M+
Sbjct: 53 DIVVKCIAQGRSPGTTRAAELCESTPRWVAADADIEEVLDEME 95
>gi|372486716|ref|YP_005026281.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Dechlorosoma suillum PS]
gi|359353269|gb|AEV24440.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Dechlorosoma suillum PS]
Length = 143
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T D TV +A + M VGAL+VV E + GI TERD L +++ G + T + ++
Sbjct: 19 TADLTVREACQRMAAARVGALLVV---EHGFLTGIFTERDALNRVLAPGLDPEHTLLSEV 75
Query: 135 MTEENKLITVSPDTKVLRAMQLM 157
MT + V P+ + A+ LM
Sbjct: 76 MTANPR--AVPPEKPLSYALHLM 96
>gi|229083952|ref|ZP_04216254.1| CBS domain protein [Bacillus cereus Rock3-44]
gi|228699357|gb|EEL52040.1| CBS domain protein [Bacillus cereus Rock3-44]
Length = 139
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E V G++T+RD ++V+G + K S
Sbjct: 13 VQCTPLDNVYEAAVKMKEEDIGMIPVV---ENNQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ ++MT ++ VSP+ + +A +LM H +
Sbjct: 66 NKITNVMT--TGIVYVSPNDPIEKATELMAQHQI 97
>gi|325183871|emb|CCA18329.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325183940|emb|CCA18398.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 494
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 55 TISDILKAKGKGADG--------SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSV 106
TI+D+L A+ +G +W + D TV DAV M + VG L+V + + V
Sbjct: 110 TIADVLAAQASNDEGIKAIHNYGTWKSISHDKTVQDAVSMMVTNKVGVLLVTQ--DSLGV 167
Query: 107 AGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
GIITERD L+KI + K + D+M+
Sbjct: 168 VGIITERDLLKKISPRTYFQKKALIKDVMS 197
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+V +AV++M +H+ G++++V + + V GI TE+DYL K++ + R V D+ T+
Sbjct: 338 SVAEAVEAMVRHDFGSVLIV--DKDQCVHGIFTEQDYLVKVLNEKRDPNEVLVTDMCTK 394
>gi|307609537|emb|CBW99035.1| hypothetical protein LPW_08201 [Legionella pneumophila 130b]
Length = 144
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ DD+V + +K M + ++GALVV + GI++ERD LR + S ++ KV
Sbjct: 18 YIHPDDSVKECIKQMVEKDIGALVVF--DNDARLIGIVSERDILRCYFHKNLSLETAKVS 75
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMT 158
D++ + +SP V +AMQ++T
Sbjct: 76 DVVY--TNVTILSPHDSVEKAMQVIT 99
>gi|336121850|ref|YP_004576625.1| signal transduction protein with CBS domains [Methanothermococcus
okinawensis IH1]
gi|334856371|gb|AEH06847.1| putative signal transduction protein with CBS domains
[Methanothermococcus okinawensis IH1]
Length = 189
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 12/83 (14%)
Query: 79 TVYDAVKSMTQHNVGALVVV----KPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T YDA + +G LVVV KP G+ITERD++ KI+ + SK V DI
Sbjct: 23 TAYDAANILKTKGIGCLVVVNDLMKP------VGLITERDFVLKIVARNLKSKEVLVKDI 76
Query: 135 MTEENKLITVSPDTKVLRAMQLM 157
+ KLI VSP ++ A ++M
Sbjct: 77 AS--TKLIYVSPKATLMDAAKIM 97
>gi|78066074|ref|YP_368843.1| XRE family transcriptional regulator [Burkholderia sp. 383]
gi|107022531|ref|YP_620858.1| XRE family transcriptional regulator [Burkholderia cenocepacia AU
1054]
gi|116689480|ref|YP_835103.1| XRE family transcriptional regulator [Burkholderia cenocepacia
HI2424]
gi|170732786|ref|YP_001764733.1| hypothetical protein Bcenmc03_1436 [Burkholderia cenocepacia MC0-3]
gi|206559832|ref|YP_002230596.1| hypothetical protein BCAL1465 [Burkholderia cenocepacia J2315]
gi|402566740|ref|YP_006616085.1| XRE family transcriptional regulator [Burkholderia cepacia GG4]
gi|421869111|ref|ZP_16300751.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia cenocepacia
H111]
gi|444362871|ref|ZP_21163363.1| CBS domain protein [Burkholderia cenocepacia BC7]
gi|444373388|ref|ZP_21172755.1| CBS domain protein [Burkholderia cenocepacia K56-2Valvano]
gi|77966819|gb|ABB08199.1| putative transcriptional regulator, XRE family [Burkholderia sp.
383]
gi|105892720|gb|ABF75885.1| putative transcriptional regulator, XRE family [Burkholderia
cenocepacia AU 1054]
gi|116647569|gb|ABK08210.1| putative transcriptional regulator, XRE family [Burkholderia
cenocepacia HI2424]
gi|169816028|gb|ACA90611.1| CBS domain containing protein [Burkholderia cenocepacia MC0-3]
gi|198035873|emb|CAR51764.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
gi|358070860|emb|CCE51629.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia cenocepacia
H111]
gi|402247937|gb|AFQ48391.1| XRE family transcriptional regulator [Burkholderia cepacia GG4]
gi|443591814|gb|ELT60675.1| CBS domain protein [Burkholderia cenocepacia K56-2Valvano]
gi|443596048|gb|ELT64581.1| CBS domain protein [Burkholderia cenocepacia BC7]
Length = 151
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 58/102 (56%), Gaps = 10/102 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDKPLREAVDTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
+ ++ V G + +V +M E +T +P+T V ++M
Sbjct: 56 ILRLHVNGGAIGDVQVRKVMDEP---LTCTPETDVNEVRRMM 94
>gi|385805337|ref|YP_005841735.1| inosine-5'-monophosphate dehydrogenase-like protein V
[Fervidicoccus fontis Kam940]
gi|383795200|gb|AFH42283.1| inosine-5'-monophosphate dehydrogenase related protein V
[Fervidicoccus fontis Kam940]
Length = 142
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 8/84 (9%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKL 141
+AV+ M ++N+G++VVV E+ + GI+TE+D + K+I K KV DIM+ +
Sbjct: 29 EAVRIMLENNIGSVVVV--NEKGVLIGILTEKDLITKVIKGKLDLKDLKVKDIMSAP--V 84
Query: 142 ITVSPDTKVLRAMQLM----TGHM 161
+ V PDT + A+ LM GH+
Sbjct: 85 VYVEPDTPLYEAVALMQSKKIGHL 108
>gi|331700303|ref|YP_004336542.1| CBS domain-containing protein [Pseudonocardia dioxanivorans CB1190]
gi|326954992|gb|AEA28689.1| CBS domain containing protein [Pseudonocardia dioxanivorans CB1190]
Length = 141
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG + D +V D + +T N GAL V+ + +AGI++ERD
Sbjct: 3 ISDVLRNKGS----AVATIGADASVGDVIAVLTTGNYGALPVM---DGARLAGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+RK+ G T V DIMT + ++T SP L ++MT
Sbjct: 56 VRKLHELGPDLVRTPVADIMTAD--VVTCSPGDSALELSRVMT 96
>gi|115351392|ref|YP_773231.1| XRE family transcriptional regulator [Burkholderia ambifaria AMMD]
gi|170703575|ref|ZP_02894324.1| CBS domain containing protein [Burkholderia ambifaria IOP40-10]
gi|171322386|ref|ZP_02911205.1| CBS domain containing protein [Burkholderia ambifaria MEX-5]
gi|172060431|ref|YP_001808083.1| hypothetical protein BamMC406_1379 [Burkholderia ambifaria MC40-6]
gi|115281380|gb|ABI86897.1| putative transcriptional regulator, XRE family [Burkholderia
ambifaria AMMD]
gi|170131518|gb|EDT00097.1| CBS domain containing protein [Burkholderia ambifaria IOP40-10]
gi|171092288|gb|EDT37662.1| CBS domain containing protein [Burkholderia ambifaria MEX-5]
gi|171992948|gb|ACB63867.1| CBS domain containing protein [Burkholderia ambifaria MC40-6]
Length = 151
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 58/102 (56%), Gaps = 10/102 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDKPLREAVDTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
+ ++ V G + +V +M E +T +P+T V ++M
Sbjct: 56 ILRLHVNGGAIGDVQVRKVMDEP---LTCTPETDVNEVRRMM 94
>gi|440226719|ref|YP_007333810.1| CBS domain-containing protein [Rhizobium tropici CIAT 899]
gi|440038230|gb|AGB71264.1| CBS domain-containing protein [Rhizobium tropici CIAT 899]
Length = 144
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
S ++ IL+AKG+ + + TV +A K + ++ +GA+VVV PG + ++GI TE
Sbjct: 2 SVSVKAILEAKGR----DVVTTGGNTTVAEAAKILNENRIGAIVVVGPGGK--ISGIFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
RD + + QG+ + +MT K+ DT M+LMT
Sbjct: 56 RDVVNAVAKQGQECLDKPIASMMT--AKVHRCKEDTTTDELMELMT 99
>gi|333922072|ref|YP_004495653.1| hypothetical protein AS9A_4420 [Amycolicicoccus subflavus DQS3-9A1]
gi|333484293|gb|AEF42853.1| hypothetical protein AS9A_4420 [Amycolicicoccus subflavus DQS3-9A1]
Length = 143
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG TV + + ++ +HNVGALVVV+ G V GI++ERD
Sbjct: 3 ISDLLRNKGSNVS----TANPKMTVAELIAALAEHNVGALVVVEDGR---VIGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+RK+ G + V IMT + +++ P V ++MT
Sbjct: 56 VRKLHRSGAAVLKAPVSAIMTTD--VVSCVPTDHVDSLAEIMT 96
>gi|162456297|ref|YP_001618664.1| hypothetical protein sce8014 [Sorangium cellulosum So ce56]
gi|161166879|emb|CAN98184.1| predicted CBS domain [Sorangium cellulosum So ce56]
Length = 306
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T YDAV++M ++VGA V+V G++ +AGI+T+RD +I+ ++ST + DIM++E
Sbjct: 19 TAYDAVRAMMDNHVGA-VLVHDGQR--LAGIVTDRDIALEIVAGDLDARSTMLRDIMSDE 75
Query: 139 NKLITVSPDTKVLRAMQLMTGH 160
+ T+ D + A++ M H
Sbjct: 76 --IATLELDASIDDAVRTMRDH 95
>gi|85709821|ref|ZP_01040886.1| hypothetical protein NAP1_13088 [Erythrobacter sp. NAP1]
gi|85688531|gb|EAQ28535.1| hypothetical protein NAP1_13088 [Erythrobacter sp. NAP1]
Length = 143
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ C V +AV + +GAL V++ G+ +AGII+ERD + ++ G + V
Sbjct: 16 ISCEVTTPVAEAVSLLAGKRIGALPVMRDGK---IAGIISERDVVYRLAESGHDALDMTV 72
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMT 158
GDIMT + +TV P T + A+ LMT
Sbjct: 73 GDIMT--SPAVTVEPTTLIDDALALMT 97
>gi|212640156|ref|YP_002316676.1| hypothetical protein Aflv_2334 [Anoxybacillus flavithermus WK1]
gi|212561636|gb|ACJ34691.1| FOG: CBS domain protein [Anoxybacillus flavithermus WK1]
Length = 154
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T D +V +A + M +HNVGA+ VV+ G+ V G+IT+RD + QG + ST V +
Sbjct: 30 TPDQSVQEAAQLMNEHNVGAIPVVENGK---VKGMITDRDITLRTTAQGL-TPSTPVSQV 85
Query: 135 MTEENKLITVSPDTKVLRAMQLM 157
MT + ++T +P+ V A ++M
Sbjct: 86 MT--SNVVTGTPNMSVNEAAEVM 106
>gi|443633473|ref|ZP_21117651.1| CBS domain pair sporulation protein YhcV [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347207|gb|ELS61266.1| CBS domain pair sporulation protein YhcV [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 140
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ T+ +A M QHNVG + VV EQ ++ G++T+RD + QGR + T V ++M+
Sbjct: 18 NQTIQEAASLMKQHNVGVIPVV---EQGALKGMLTDRDIALRTTAQGRDGQ-TPVSEVMS 73
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML 162
+ L++ +P+ + A QLM H +
Sbjct: 74 TD--LVSGNPNMSLEDASQLMAQHQI 97
>gi|333924636|ref|YP_004498216.1| hypothetical protein Desca_2477 [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333750197|gb|AEF95304.1| CBS domain containing protein [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 145
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+V +A + M+Q+NVGA+ VV E GI+T+RD + + QG++ +ST V +M+
Sbjct: 21 SVQEAAQLMSQNNVGAIPVV---ENSKCVGIVTDRDIALRAVSQGQNPQSTTVQSVMS-- 75
Query: 139 NKLITVSPDTKVLRAMQLM 157
L+T +P+ V A LM
Sbjct: 76 TGLVTGTPEMGVHEAANLM 94
>gi|53805171|ref|YP_113099.1| hypothetical protein MCA0583 [Methylococcus capsulatus str. Bath]
gi|53758932|gb|AAU93223.1| CBS domain protein [Methylococcus capsulatus str. Bath]
Length = 150
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVA-GIITERDYLRKIIVQGRSSKSTKVGDIM 135
DDT+ +A K M H+VG++VVV+ E GI+T+RD + +I+ + + + VGD+M
Sbjct: 17 DDTIVEAAKVMRAHHVGSVVVVEEAEGGCKPLGILTDRDLVVEILAEEVAPDAVTVGDVM 76
Query: 136 TEENKLITVSPDTKVLRAMQLMTGH 160
+ E L+T + +Q M H
Sbjct: 77 SFE--LVTAQEQDGLWETLQRMRAH 99
>gi|430748883|ref|YP_007211791.1| signal transduction protein [Thermobacillus composti KWC4]
gi|430732848|gb|AGA56793.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Thermobacillus composti KWC4]
Length = 218
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 43 SARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGE 102
+AR G + D++ + S +V+DAV ++ NV L+VV
Sbjct: 66 TARTASQGLAGCKVKDVMAVPVSVGEHS--------SVHDAVVALFTENVEELIVVD--R 115
Query: 103 QKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
++ GI+T +D L K+ V G + + V +MT ++TVSP+ A++LM H L
Sbjct: 116 EQRFTGIVTAKDLL-KVTVGGADASAFPVSLVMTRVPNVVTVSPEDDAAEALRLMFAHEL 174
>gi|261403844|ref|YP_003248068.1| putative signal transduction protein with CBS domains
[Methanocaldococcus vulcanius M7]
gi|261370837|gb|ACX73586.1| putative signal transduction protein with CBS domains
[Methanocaldococcus vulcanius M7]
Length = 173
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D +VYD K M + V ++VV + + + E+D L+K++++ S K+ DI +
Sbjct: 20 DVSVYDVAKLMIEEEVPCVLVVCERSKNEIE-VAREKDILKKVLIKKLSPDKVKIEDISS 78
Query: 137 EENKLITVSPDTKVLRAMQLMTGH 160
+KLIT+ P+T + A++LM+ H
Sbjct: 79 --SKLITIPPETTIDEALKLMSKH 100
>gi|398303965|ref|ZP_10507551.1| CBS domain pair sporulation protein YhcV [Bacillus vallismortis
DV1-F-3]
Length = 140
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 8/90 (8%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ T+ +A M Q+NVGA+ VV EQ ++ G++T+RD + +GR + T V ++M+
Sbjct: 18 NQTIQEAASLMNQYNVGAIPVV---EQGALKGMLTDRDIALRTTAEGRDGQ-TPVSEVMS 73
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML--LP 164
+ LI+ +P+ + A QLM H + LP
Sbjct: 74 TD--LISGNPNMSLQDASQLMAQHQIRRLP 101
>gi|327311248|ref|YP_004338145.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
gi|326947727|gb|AEA12833.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
Length = 142
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
T D T+ DA K + +HN+G LV+V ++ V G+++ERD +R + +G S V D
Sbjct: 14 ATPDITIKDAAKILREHNIGLLVLVDREDRSKVVGVVSERDIVRA-VAEG-VDPSRPVLD 71
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGH 160
I T +I+V D + +A +LM H
Sbjct: 72 IAT--RSVISVEADDPLNKAAELMRRH 96
>gi|294498622|ref|YP_003562322.1| CBS domain-containing protein [Bacillus megaterium QM B1551]
gi|294348559|gb|ADE68888.1| CBS domain protein [Bacillus megaterium QM B1551]
Length = 140
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C D V A K M N G++ V ++ V G+IT+RD + + G+ + D
Sbjct: 15 CAPHDPVTAAAKLMRDINCGSVPVC---QENRVMGMITDRDIVLNCVADGKDCNTVHCHD 71
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGHML 162
MT++ +IT SPDT + ++M H +
Sbjct: 72 CMTKD--VITCSPDTDIHECARMMADHQI 98
>gi|116753656|ref|YP_842774.1| signal-transduction protein [Methanosaeta thermophila PT]
gi|116665107|gb|ABK14134.1| putative signal-transduction protein with CBS domains [Methanosaeta
thermophila PT]
Length = 120
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
V DA+K M G ++V + G K V GI+T +K+ G + V DIMT
Sbjct: 14 VIDAIKLMASGPKGCVIVAEGGLLKEVEGIVTTSRIFKKVFAAGLDPANVSVADIMTPA- 72
Query: 140 KLITVSPDTKVLRAMQLMTGH 160
L+T+SP+ A +LM H
Sbjct: 73 PLVTISPEATTREAAELMVRH 93
>gi|323701536|ref|ZP_08113209.1| CBS domain containing protein [Desulfotomaculum nigrificans DSM
574]
gi|323533545|gb|EGB23411.1| CBS domain containing protein [Desulfotomaculum nigrificans DSM
574]
Length = 145
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+V +A + M+Q+NVGA+ VV E GI+T+RD + + QG++ +ST V +M+
Sbjct: 21 SVQEAAQLMSQNNVGAIPVV---ENSKCVGIVTDRDIALRAVSQGQNPQSTTVQSVMS-- 75
Query: 139 NKLITVSPDTKVLRAMQLM 157
L+T +P+ V A LM
Sbjct: 76 TGLVTGTPEMGVHEAANLM 94
>gi|302039066|ref|YP_003799388.1| hypothetical protein NIDE3787 [Candidatus Nitrospira defluvii]
gi|300607130|emb|CBK43463.1| conserved protein of unknown function, contains CBS domain pairs
[Candidatus Nitrospira defluvii]
Length = 284
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVV---KPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
D +V M H++G++++ +P +AGI+TE D + K++ GR T + D
Sbjct: 23 DTSVVTVATRMRTHSIGSVLIECFDRPHNDCRIAGIVTETDLVAKVLAPGRVPSRTSMAD 82
Query: 134 IMTEENKLITVSPDTKVLRAMQLM 157
IM+ + LIT++PD ++ A LM
Sbjct: 83 IMS--SPLITIAPDRPMVDASHLM 104
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 76 TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
+D+T DA + M ++GAL V++ E + GIITE D +RK++ ++ +VG +M
Sbjct: 164 SDETALDAAQRMADKHIGALFVMEADE---LVGIITEGDLVRKLLAYQLDPQTLRVGALM 220
>gi|327311333|ref|YP_004338230.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
gi|326947812|gb|AEA12918.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
Length = 128
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
++CTT DT+ AV M +N+GA++VV + S GI TERD L K++ +G S T +
Sbjct: 12 VYCTTRDTIRCAVSKMYAYNIGAVLVVD--DVGSPVGIFTERD-LVKVVAEG-ISLDTPL 67
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGH 160
+ +E LI P+ V A Q M H
Sbjct: 68 EKLAPKE--LIKAYPNESVFMAAQKMIEH 94
>gi|84685642|ref|ZP_01013539.1| CBS domain protein [Maritimibacter alkaliphilus HTCC2654]
gi|84666308|gb|EAQ12781.1| CBS domain protein [Rhodobacterales bacterium HTCC2654]
Length = 173
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 12/120 (10%)
Query: 39 ESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVV 98
+SVSS H T+ D+L K DG + + T++DAV + + +GAL+ V
Sbjct: 21 QSVSSNTTVSHA----TVQDVLDKK----DGRIITIHPEQTLHDAVVLLRDNRIGALLCV 72
Query: 99 KPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
E+ +AGI++ERD +RK+ Q + +V ++MT + T + D ++ ++LMT
Sbjct: 73 D--EEGKLAGILSERDIVRKLADQPGKTLPHRVEEVMT--RTVETCTADEPLVVVLRLMT 128
>gi|383778866|ref|YP_005463432.1| hypothetical protein AMIS_36960 [Actinoplanes missouriensis 431]
gi|381372098|dbj|BAL88916.1| hypothetical protein AMIS_36960 [Actinoplanes missouriensis 431]
Length = 145
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 20/109 (18%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISDIL+ KG + + V ++ + QH +GA+VV + G +V GI++ERD
Sbjct: 3 ISDILRVKGD----QVVTVPPETPVVRLLEVLAQHRIGAVVVSRDG--TTVEGIVSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLI------TVSPDTKVLRAMQLMT 158
+R + V+G D++TE +I TV+PD ++ +LMT
Sbjct: 57 VRALAVRG--------ADVLTEPVSMIATTQVRTVAPDAQLEDVERLMT 97
>gi|423525354|ref|ZP_17501827.1| hypothetical protein IGC_04737 [Bacillus cereus HuA4-10]
gi|401168036|gb|EJQ75305.1| hypothetical protein IGC_04737 [Bacillus cereus HuA4-10]
Length = 139
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + V+ E + + G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVI---ENQQIVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
++ ++MT +++VSPD + +A +LM + +
Sbjct: 66 NQITNVMT--TNIVSVSPDDSIEKATELMAQYQI 97
>gi|413962959|ref|ZP_11402186.1| hypothetical protein BURK_023645 [Burkholderia sp. SJ98]
gi|413928791|gb|EKS68079.1| hypothetical protein BURK_023645 [Burkholderia sp. SJ98]
Length = 150
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 58/105 (55%), Gaps = 9/105 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + DA+ +M H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKGN----TLFTVTPDTPLSDAIDTMAAHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
+ + G S +T + +M ++ +T +P+T V ++M H
Sbjct: 56 ILTLHNNGGSVGATTIRKVM--DDHPLTCTPETDVNEVRRMMLEH 98
>gi|28210105|ref|NP_781049.1| inosine-5'-monophosphate dehydrogenase [Clostridium tetani E88]
gi|28202541|gb|AAO34986.1| inosine-5-monophosphate dehydrogenase related protein [Clostridium
tetani E88]
Length = 143
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+DTV A + M +H VG+L + G+ + GIIT+RD + + G S ++ V +IMT
Sbjct: 17 EDTVEHAAQLMKEHGVGSLPICNEGK---IVGIITDRDIALRSVAMGESIQNQTVRNIMT 73
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+ ITVSP+ A ++M+
Sbjct: 74 --SNPITVSPNISATEAAEIMS 93
>gi|409203437|ref|ZP_11231640.1| inosine-5'-monophosphate dehydrogenase [Pseudoalteromonas
flavipulchra JG1]
Length = 612
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
++ DA K M+QH V +++V EQ + G++T+RD +++ Q + S + +IMTE+
Sbjct: 167 SIRDAAKLMSQHRVSSIMVT---EQARLVGVVTDRDLRNRVLAQDKDP-SAPLAEIMTEK 222
Query: 139 NKLITVSPDTKVLRAMQLMTGH 160
K I + +V A+ LM H
Sbjct: 223 PKHIF--ENNRVFSALHLMLKH 242
>gi|385682177|ref|ZP_10056105.1| hypothetical protein AATC3_39898 [Amycolatopsis sp. ATCC 39116]
Length = 142
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 13/84 (15%)
Query: 56 ISDILKAKGKGADGSWLWCTT---DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
I+D+L++KG W T + ++ D + + +HNVGA+VV + +AGI++E
Sbjct: 3 IADLLRSKGN-------WVATVRPESSITDLLAGLAEHNVGAMVVAG---EDGIAGIVSE 52
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMT 136
RD +RK+ G + V +IMT
Sbjct: 53 RDVVRKLNEHGPALLEHPVSEIMT 76
>gi|238027743|ref|YP_002911974.1| XRE family transcriptional regulator [Burkholderia glumae BGR1]
gi|237876937|gb|ACR29270.1| Putative transcriptional regulator, XRE family [Burkholderia glumae
BGR1]
Length = 156
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 10/102 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + GI+T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTPLREAVDAMAEHDIGSLVVMEYGD---LVGILTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
+ ++ G + +V +M E +T +P+T V ++M
Sbjct: 56 ILRLKANGGAIGDVQVRKVMDEP---LTCTPETDVNEVRRMM 94
>gi|374587676|ref|ZP_09660768.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Leptonema illini DSM 21528]
gi|373876537|gb|EHQ08531.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Leptonema illini DSM 21528]
Length = 642
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C D V DA K MT+H VG+++V+ +++ GIIT+ D +RK + G S++ +
Sbjct: 178 CRPDMLVSDAAKIMTEHRVGSIMVLD--DRQYPLGIITDSD-MRKKVATGLFPISSRTDE 234
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGH 160
IM+ + +IT SP+ A+ LM H
Sbjct: 235 IMS--SPVITASPELTAADAIVLMMRH 259
>gi|289673655|ref|ZP_06494545.1| CBS, partial [Pseudomonas syringae pv. syringae FF5]
Length = 95
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + N+GAL E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLEALKLMAEKNIGAL---PVVEGNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EENKLITV 144
+K+ITV
Sbjct: 81 --SKVITV 86
>gi|134099698|ref|YP_001105359.1| signal-transduction protein [Saccharopolyspora erythraea NRRL 2338]
gi|291008298|ref|ZP_06566271.1| signal-transduction protein [Saccharopolyspora erythraea NRRL 2338]
gi|133912321|emb|CAM02434.1| putative signal-transduction protein with CBS domains
[Saccharopolyspora erythraea NRRL 2338]
Length = 143
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 8/103 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
IS+IL KG +D + + T V + ++ + HN+GA+ VV GE + + GI++ERD
Sbjct: 3 ISEILSKKG--SDVATIRPTA--AVSELLRMLAHHNIGAMAVV--GEGEDLLGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R++ +G + V +IMT +IT +P V ++MT
Sbjct: 57 VRRLDERGAELLTATVAEIMT--TSVITCTPADAVESLTEIMT 97
>gi|14520462|ref|NP_125937.1| inosine-5'-monophosphate dehydrogenase related [Pyrococcus abyssi
GE5]
gi|5457677|emb|CAB49168.1| Small intracellular module of unknown function,containing CBS
domains [Pyrococcus abyssi GE5]
gi|380740986|tpe|CCE69620.1| TPA: inosine-5'-monophosphate dehydrogenase related [Pyrococcus
abyssi GE5]
Length = 179
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D+V+ + ++++ VG+ VV+ ++ V GI+TERD L K++ +G+ K KV +IMT+
Sbjct: 22 DSVHRVARILSKNKVGSAVVM---DKDEVLGIVTERDILDKVVAKGKDPKEVKVEEIMTK 78
Query: 138 ENKLITVSPDTKVLRAMQLMT 158
+ + D V A+ LMT
Sbjct: 79 NP--VKIEYDYDVQDAIDLMT 97
>gi|297618874|ref|YP_003706979.1| putative signal transduction protein [Methanococcus voltae A3]
gi|297377851|gb|ADI36006.1| putative signal transduction protein with CBS domains
[Methanococcus voltae A3]
Length = 218
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D T+Y+ ++ +H +G L+ + E+ GIITE+D + ++ + SK V DI++
Sbjct: 21 DTTLYEVANTLKEHGIGCLIALNDLEKP--VGIITEKDLVLNVVARNLKSKEITVRDIIS 78
Query: 137 EENKLITVSPDTKVLRAMQLM 157
+ KLI++SP + V+ A + M
Sbjct: 79 SK-KLISISPRSTVMDAAKKM 98
>gi|254774594|ref|ZP_05216110.1| CBS domain-containing protein [Mycobacterium avium subsp. avium
ATCC 25291]
Length = 142
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + D TV + + +T+ N+GA+VVV + V GI++ERD
Sbjct: 3 IADVLRNKG----AAVVTINPDATVRELIAGLTEQNIGAMVVVGA---EGVLGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIM 135
+R++ V G S S V IM
Sbjct: 56 VRQLHVHGASVLSRPVSKIM 75
>gi|325982180|ref|YP_004294582.1| putative signal transduction protein with CBS domains [Nitrosomonas
sp. AL212]
gi|325531699|gb|ADZ26420.1| putative signal transduction protein with CBS domains [Nitrosomonas
sp. AL212]
Length = 149
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVV-KPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
D+TV +A K M Q +VGA++V+ KP + G++T+RD + +++ VGDIM
Sbjct: 17 DETVQEAAKLMRQFHVGAVIVIDKPNGRAVPVGVVTDRDLIVEVMATELDETVITVGDIM 76
Query: 136 TEENKLITVSPDTKVLRAMQLM 157
+ + TV +T++ A++LM
Sbjct: 77 VPD--IFTVKENTEIHEAIELM 96
>gi|99078228|ref|YP_611486.1| signal-transduction protein [Ruegeria sp. TM1040]
gi|99035366|gb|ABF62224.1| putative signal-transduction protein with CBS domains [Ruegeria sp.
TM1040]
Length = 174
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ D+L +K +G W +DTV AV+ + +GAL+V Q + GI++ERD
Sbjct: 34 TVGDVLASK----NGELYWINPEDTVAKAVEVLRDRGIGALLV--KNAQGDLVGILSERD 87
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R++ ++ V +M+ + +IT + D V+ ++LMT
Sbjct: 88 IVRRLADTPGATLPQTVEGLMSRD--VITATTDQSVVEVLRLMT 129
>gi|420157289|ref|ZP_14664127.1| CBS domain protein [Clostridium sp. MSTE9]
gi|394756582|gb|EJF39662.1| CBS domain protein [Clostridium sp. MSTE9]
Length = 144
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DD++ A + M QHN+G++ V +Q+ V GI+T+RD + +G++ K KV DIM+
Sbjct: 19 DDSIERAAQLMKQHNIGSIPVC---DQEKVVGIVTDRDIATRSAAKGQNVKQQKVCDIMS 75
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+ + +P+ V +LM+
Sbjct: 76 Q--NPVVGNPEMDVHEVAKLMS 95
>gi|114320893|ref|YP_742576.1| signal transduction protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114227287|gb|ABI57086.1| putative signal transduction protein with CBS domains
[Alkalilimnicola ehrlichii MLHE-1]
Length = 138
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
WC D + + + + ++GA+ + GE + G++T+RD + + + +GR S G
Sbjct: 13 WCAPDTPIMEIARLFREKDIGAIPI---GENDRLVGMLTDRDIVCRGLAEGRDVASMTAG 69
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTGH 160
D+MT + +I D + A+ LM H
Sbjct: 70 DVMTRD--IIYCWEDDDIEDAVHLMEEH 95
>gi|41408317|ref|NP_961153.1| hypothetical protein MAP2219c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118466251|ref|YP_881000.1| CBS domain-containing protein [Mycobacterium avium 104]
gi|417750273|ref|ZP_12398641.1| putative signal-transduction protein containing cAMP-binding and
CBS [Mycobacterium avium subsp. paratuberculosis S397]
gi|440777872|ref|ZP_20956656.1| CBS domain-containing protein [Mycobacterium avium subsp.
paratuberculosis S5]
gi|41396673|gb|AAS04536.1| hypothetical protein MAP_2219c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118167538|gb|ABK68435.1| CBS domain protein [Mycobacterium avium 104]
gi|336458247|gb|EGO37228.1| putative signal-transduction protein containing cAMP-binding and
CBS [Mycobacterium avium subsp. paratuberculosis S397]
gi|436721788|gb|ELP45863.1| CBS domain-containing protein [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 142
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + D TV + + +T+ N+GA+VVV + V GI++ERD
Sbjct: 3 IADVLRNKG----AAVVTINPDATVRELIAGLTEQNIGAMVVVGA---EGVLGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIM 135
+R++ V G S S V IM
Sbjct: 56 VRQLHVHGASVLSRPVSKIM 75
>gi|327310289|ref|YP_004337186.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
gi|326946768|gb|AEA11874.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
Length = 140
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV A ++M +NVG LV+V P E K G+I+ERD +R I G++ + V T
Sbjct: 19 TVEQAAEAMANNNVGLLVIVDPKEPKKPIGVISERDIIRTI--AGKAPLTVTVDKAGTMG 76
Query: 139 NKLITVSPDTKVLRAMQLMTGH 160
N I + D + RA LM H
Sbjct: 77 N-FIWIREDETIYRAAYLMRKH 97
>gi|167631117|ref|YP_001681616.1| cbs domain protein [Heliobacterium modesticaldum Ice1]
gi|167593857|gb|ABZ85605.1| cbs domain protein, putative [Heliobacterium modesticaldum Ice1]
Length = 142
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D+T+ +A K M + NVGA+ VV E + GIIT+RD + +++ +G + T + MT
Sbjct: 18 DETIIEAAKIMMRLNVGAVPVV---EGQKCVGIITDRDIVLRVVAKGMDPRGTTIQSAMT 74
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML 162
++ IT +PD + A LM+ +
Sbjct: 75 KDP--ITGTPDMDIHAAADLMSDRQI 98
>gi|227832961|ref|YP_002834668.1| signal-transduction protein [Corynebacterium aurimucosum ATCC
700975]
gi|262182552|ref|ZP_06041973.1| putative signal-transduction protein [Corynebacterium aurimucosum
ATCC 700975]
gi|227453977|gb|ACP32730.1| putative signal-transduction protein [Corynebacterium aurimucosum
ATCC 700975]
Length = 622
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQ--KSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
T+ +A MT+H V +L+VV+ GE+ K + GI+T+RD LR ++ + + VG+IMT
Sbjct: 169 TIREAALLMTEHGVSSLLVVESGEETDKRLTGILTDRD-LRTRVLAAQRDPAAPVGEIMT 227
Query: 137 EENKLITVSPDTKVLRAMQLM 157
+ +TVS D + A+ M
Sbjct: 228 PQP--LTVSADAPAMEALLHM 246
>gi|15606685|ref|NP_214065.1| polysialic acid capsule expression protein [Aquifex aeolicus VF5]
gi|7388505|sp|O67500.1|Y1546_AQUAE RecName: Full=Uncharacterized phosphosugar isomerase aq_1546
gi|2983910|gb|AAC07460.1| polysialic acid capsule expression protein [Aquifex aeolicus VF5]
Length = 322
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D ++ +A+ MT GA VV E+ + GIIT+ D LR+ + +G S ++T+ D+MT
Sbjct: 215 DTSMKEAIIEMTAKGFGATAVVN--EEGKLVGIITDGD-LRRFVNRGGSFENTRAKDVMT 271
Query: 137 EENKLITVSPDTKVLRAMQLMTGH 160
+ K T+ PD L+A++ M H
Sbjct: 272 KNPK--TIKPDELALKALRKMEDH 293
>gi|451947312|ref|YP_007467907.1| cAMP-binding and CBS domain-containing putative signal-transduction
protein [Desulfocapsa sulfexigens DSM 10523]
gi|451906660|gb|AGF78254.1| cAMP-binding and CBS domain-containing putative signal-transduction
protein [Desulfocapsa sulfexigens DSM 10523]
Length = 642
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 37 RFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALV 96
R VS+ ++ S + D++K K + GS ++ +A SM +H VG+L+
Sbjct: 155 RHHKVSNRSGDDLYLFSVRVGDLVKTLRKVSSGS--------SIQEAAASMAEHRVGSLL 206
Query: 97 VVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
V P +++++ GIIT+RD K++ G + V +IMT
Sbjct: 207 VYDPADEENIVGIITDRDLRSKVVAAGLDY-NLPVENIMT 245
>gi|375361599|ref|YP_005129638.1| protein YhcV [Bacillus amyloliquefaciens subsp. plantarum CAU B946]
gi|421732401|ref|ZP_16171524.1| YhcV [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|451347763|ref|YP_007446394.1| protein YhcV [Bacillus amyloliquefaciens IT-45]
gi|371567593|emb|CCF04443.1| YhcV [Bacillus amyloliquefaciens subsp. plantarum CAU B946]
gi|407074614|gb|EKE47604.1| YhcV [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|449851521|gb|AGF28513.1| protein YhcV [Bacillus amyloliquefaciens IT-45]
Length = 140
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVGA+ VV GE K G++T+RD + QGR + T V
Sbjct: 15 VSPNQTIQEAAALMHQHNVGAIPVVDGGELK---GMLTDRDIALRTTAQGRDGQ-TPVSH 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
+M+ +++++ +P+ + A LM H + LP
Sbjct: 71 VMS--SQVVSGNPEMSLEEASHLMAQHQIRRLP 101
>gi|357385164|ref|YP_004899888.1| inosine-5'-monophosphate dehydrogenase [Pelagibacterium
halotolerans B2]
gi|351593801|gb|AEQ52138.1| inosine-5'-monophosphate dehydrogenase [Pelagibacterium
halotolerans B2]
Length = 141
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 65 KGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124
KG+D + +D T+ D + ++ +HN+GA+VVV G+ V GII+ERD +R +
Sbjct: 10 KGSD--VVTVRSDSTIGDLIATLARHNIGAVVVVDNGK---VEGIISERDIVRHLAGSAE 64
Query: 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
++ V +MT K T S DT V +AM +M+
Sbjct: 65 GFRAKPVSTLMTRAPKTCTKS-DT-VDQAMNIMS 96
>gi|149185248|ref|ZP_01863565.1| hypothetical protein ED21_19382 [Erythrobacter sp. SD-21]
gi|148831359|gb|EDL49793.1| hypothetical protein ED21_19382 [Erythrobacter sp. SD-21]
Length = 177
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T D V DA+ + +GAL V++ G VAGI +ERD + ++ +G + S ++G++
Sbjct: 53 TVDQPVSDAITLLASKRIGALPVMEEGR---VAGIFSERDVIYRLAHEGETCLSRRIGEV 109
Query: 135 MTEENKLITVSPDTKVLRAMQLMT 158
MT + ITV V +A+ LMT
Sbjct: 110 MT--SPAITVERSMLVDQALALMT 131
>gi|83952657|ref|ZP_00961387.1| CBS domain-containing protein [Roseovarius nubinhibens ISM]
gi|83835792|gb|EAP75091.1| CBS domain-containing protein [Roseovarius nubinhibens ISM]
Length = 144
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILKAKG D + V DA + + + +G LVV + G+Q + GI++ERD
Sbjct: 3 VQQILKAKG---DDKVITIKPGTLVSDAARILAERRIGGLVVSEDGKQ--IQGILSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDT 148
+R + V+G + S ++ D+MT N + DT
Sbjct: 58 VRSLAVRGATCLSDRIDDMMT-RNPVCCARGDT 89
>gi|384047568|ref|YP_005495585.1| inosine-5'-monophosphate dehydrogenase protein [Bacillus megaterium
WSH-002]
gi|345445259|gb|AEN90276.1| Inosine-5'-monophosphate dehydrogenase protein [Bacillus megaterium
WSH-002]
Length = 140
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C D V A K M N G++ V ++ V G+IT+RD + + G+ + D
Sbjct: 15 CAPHDPVTAAAKLMRDINCGSVPVC---QENRVMGMITDRDIVLNCVADGKDCNTVHCHD 71
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGHML 162
MT++ ++T SPDT + ++M H +
Sbjct: 72 CMTKD--VVTCSPDTDIHECARMMADHQI 98
>gi|194014891|ref|ZP_03053508.1| YlbB [Bacillus pumilus ATCC 7061]
gi|194013917|gb|EDW23482.1| YlbB [Bacillus pumilus ATCC 7061]
Length = 149
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ C DD Y+A M + ++GA+ VV G+Q + GI+T+RD + + I + + S +V
Sbjct: 15 VTCQQDDNTYEAAVKMREADIGAIPVVN-GDQ--LVGIVTDRDLVLRGIAE-KKPNSQEV 70
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
G +MT+E ++T D + ++LM+ H L
Sbjct: 71 GSLMTKE--VLTAEEDATLEEIVRLMSEHQL 99
>gi|302348349|ref|YP_003815987.1| signal-transduction protein with CBS domains [Acidilobus
saccharovorans 345-15]
gi|302328761|gb|ADL18956.1| Putative signal-transduction protein with CBS domains [Acidilobus
saccharovorans 345-15]
Length = 141
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
T D T+ +A + M G++VVV P + V GI TERD R +V R S +K+GD
Sbjct: 22 ATADATLAEAARLMYTKGTGSVVVVSP--EGKVIGIFTERDLSR--VVADRVSYDSKLGD 77
Query: 134 IMTEENKLITVSPDTKVLRAMQLMT 158
+MT++ +T+ D + +A++L++
Sbjct: 78 LMTKDP--VTIRDDEPITKAVELLS 100
>gi|163847531|ref|YP_001635575.1| hypothetical protein Caur_1971 [Chloroflexus aurantiacus J-10-fl]
gi|222525381|ref|YP_002569852.1| putative signal transduction protein with CBS domains [Chloroflexus
sp. Y-400-fl]
gi|163668820|gb|ABY35186.1| CBS domain containing protein [Chloroflexus aurantiacus J-10-fl]
gi|222449260|gb|ACM53526.1| putative signal transduction protein with CBS domains [Chloroflexus
sp. Y-400-fl]
Length = 155
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 13/90 (14%)
Query: 74 CTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
C TDD V DA + MT++ + L VV P Q + G++TE D + K +GR+ K
Sbjct: 13 CVTDDAAVEDAARLMTRNRISGLPVVNP--QGMLVGLVTEHDLIAK---EGRTVK----- 62
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTGHML 162
+IMT +I+VSPDT+V + L+T +
Sbjct: 63 EIMT--RSVISVSPDTEVEQIQHLLTNQRI 90
>gi|374853591|dbj|BAL56495.1| hypothetical conserved protein [uncultured alpha proteobacterium]
Length = 152
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T + TV A + MT+H G++VVV + V GI TERD R+++ G +T + +
Sbjct: 26 TPETTVRRAAELMTEHACGSVVVVDAAGR--VVGIFTERDLTRRVVAAGLDPDTTPLSAV 83
Query: 135 MTEENKLITVSPDTKVLRAMQLM--TGHMLLP 164
MT E T++ D V A++ M G+ LP
Sbjct: 84 MTPEPD--TIAADAPVADAIRHMDECGYKHLP 113
>gi|403381207|ref|ZP_10923264.1| CBS domain-containing protein [Paenibacillus sp. JC66]
Length = 223
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV DAV ++ NVG+LVV GE + G+I+ +D L K+ + +++ V +MT +
Sbjct: 99 TVNDAVVTLFLENVGSLVVTD-GE-GFLQGVISRKDLL-KVTLGNQAAAQMPVSLVMTRK 155
Query: 139 NKLITVSPDTKVLRAMQLMTGH 160
LITV+PD VL A Q M H
Sbjct: 156 PNLITVTPDDPVLEAGQKMIHH 177
>gi|182439054|ref|YP_001826773.1| hypothetical protein SGR_5261 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178467570|dbj|BAG22090.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 160
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 40 SVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVK 99
+V SAR + TT DI+ + + W +T+ A + M +HNVGAL V
Sbjct: 9 AVPSARRRKSPM--TTAKDIMHSGAR-------WIPAHETLDRAAQLMREHNVGALPVSA 59
Query: 100 PGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTK-VLRAMQ 155
G+ + GIIT+RD + + +G GD+ + I D VL MQ
Sbjct: 60 NGDSDRMVGIITDRDIVVGCVAKGHDPAKVTAGDLAQGTPRWIEAEADVDAVLEEMQ 116
>gi|149181717|ref|ZP_01860209.1| CBS domain protein [Bacillus sp. SG-1]
gi|148850565|gb|EDL64723.1| CBS domain protein [Bacillus sp. SG-1]
Length = 144
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 14/96 (14%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---STK 130
CT D VY+ M +++VG + +V + + G+IT+RD I+V+G + K S+K
Sbjct: 14 CTLLDNVYEVAVKMKENDVGGIPIV---DGDHLVGMITDRD----IVVRGVAEKHPGSSK 66
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
V ++M++E L+TV DT + A LM+ H + LP
Sbjct: 67 VEEVMSDE--LVTVGADTTIDEAASLMSRHQIRRLP 100
>gi|312113812|ref|YP_004011408.1| signal transduction protein with CBS domains [Rhodomicrobium
vannielii ATCC 17100]
gi|311218941|gb|ADP70309.1| putative signal transduction protein with CBS domains
[Rhodomicrobium vannielii ATCC 17100]
Length = 143
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+++ ILK KG+ L D TV++ V+ + + +GA+VVV EQ V GI++ERD
Sbjct: 2 SVAGILKGKGRKV----LSVLPDRTVFEVVRLLHANRIGAVVVVD--EQHHVLGIVSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
+R + +G ++ V D MT + T S + M+ MT H
Sbjct: 56 IVRILAERGAAALEETVADHMT--RPVSTCSEHHSIDWVMEEMTQH 99
>gi|373857190|ref|ZP_09599932.1| CBS domain containing protein [Bacillus sp. 1NLA3E]
gi|372452840|gb|EHP26309.1| CBS domain containing protein [Bacillus sp. 1NLA3E]
Length = 144
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C+ D V++ M + NVGA+ +V + + + G+IT+RD + + I + + S+KV +
Sbjct: 15 CSLLDNVFEVAVKMKEWNVGAVPIV---DNQKLVGMITDRDIVLRCIAE-KHPASSKVEE 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGHML 162
IM++ +LITV+PD+ A ++M + +
Sbjct: 71 IMSK--RLITVTPDSTTQEAAKIMAKNQI 97
>gi|291444191|ref|ZP_06583581.1| CBS domain-containing protein [Streptomyces roseosporus NRRL 15998]
gi|291347138|gb|EFE74042.1| CBS domain-containing protein [Streptomyces roseosporus NRRL 15998]
Length = 151
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT DI+ + + W +T+ A + M +HNVGAL V G+ + GIIT+R
Sbjct: 12 TTAKDIMHSGAR-------WIPAHETLDRAAQLMREHNVGALPVSADGDSDRMVGIITDR 64
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTK-VLRAMQ 155
D + + +G GD+ + I D VL MQ
Sbjct: 65 DIVVGCVAKGHDPSKVTAGDLAQGTPRWIEAEADVDAVLEEMQ 107
>gi|239987230|ref|ZP_04707894.1| hypothetical protein SrosN1_07992 [Streptomyces roseosporus NRRL
11379]
gi|411001733|ref|ZP_11378062.1| hypothetical protein SgloC_02953 [Streptomyces globisporus C-1027]
Length = 141
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT DI+ + + W +T+ A + M +HNVGAL V G+ + GIIT+R
Sbjct: 2 TTAKDIMHSGAR-------WIPAHETLDRAAQLMREHNVGALPVSADGDSDRMVGIITDR 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTK-VLRAMQ 155
D + + +G GD+ + I D VL MQ
Sbjct: 55 DIVVGCVAKGHDPSKVTAGDLAQGTPRWIEAEADVDAVLEEMQ 97
>gi|365866512|ref|ZP_09406125.1| hypothetical protein SPW_6429 [Streptomyces sp. W007]
gi|364004058|gb|EHM25185.1| hypothetical protein SPW_6429 [Streptomyces sp. W007]
Length = 141
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT DI+ + + W +T+ A + M +HNVGAL V G+ + GIIT+R
Sbjct: 2 TTAKDIMHSGAR-------WIPAHETLDRAAQLMREHNVGALPVSANGDSDRMVGIITDR 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTK-VLRAMQ 155
D + + +G GD+ + I D VL MQ
Sbjct: 55 DIVIDCVAKGHDPAKITAGDLAQGTPRWIEAEADVNAVLEEMQ 97
>gi|429205041|ref|ZP_19196321.1| Inosine-5'-monophosphate dehydrogenase [Lactobacillus saerimneri
30a]
gi|428146650|gb|EKW98886.1| Inosine-5'-monophosphate dehydrogenase [Lactobacillus saerimneri
30a]
Length = 495
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T DD+V +A M ++ + + +V+ E K GIIT RD LR + + STK+
Sbjct: 102 FFLTPDDSVANAEALMKKYRISGVPIVETMENKKFCGIITNRD-LRFV-----TDYSTKI 155
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLM 157
G++MT+EN L+T T + +A +++
Sbjct: 156 GNVMTKEN-LVTAPEGTSLEKAEEIL 180
>gi|288961578|ref|YP_003451888.1| signal-transduction protein with CBS domains [Azospirillum sp.
B510]
gi|288913858|dbj|BAI75344.1| signal-transduction protein with CBS domains [Azospirillum sp.
B510]
Length = 144
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
++ +LK KG + DD+V + +T+H +GA++V+ + GI++ERD
Sbjct: 3 VAAVLKRKGN----RIVSAAPDDSVAAVTRLLTEHRIGAVLVMD--DDGKPVGILSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R + G ++ D+MT + LIT SP+ + M +MT
Sbjct: 57 VRAVARDGAAALERPATDLMTRD--LITASPNDTIADMMAVMT 97
>gi|157692168|ref|YP_001486630.1| cystathionine beta-synthase [Bacillus pumilus SAFR-032]
gi|157680926|gb|ABV62070.1| possible cystathionine beta-synthase [Bacillus pumilus SAFR-032]
Length = 140
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ C DD Y+A M ++GA+ VV G+Q + GI+T+RD + + I + + S +V
Sbjct: 6 VTCQQDDNSYEAAVKMRDADIGAIPVVN-GDQ--LVGIVTDRDLVLRGIAE-KKPNSQEV 61
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
G IMT+E ++T D + ++LM+ H L
Sbjct: 62 GSIMTKE--VLTAEEDATLEEIVRLMSEHQL 90
>gi|406922552|gb|EKD60005.1| cbs [uncultured bacterium]
Length = 139
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV A + NVGA++V+K GE ++ G+++ERD +RK I Q R S ST V +IMT +
Sbjct: 23 TVRQACHVLDHFNVGAVLVLK-GE--ALVGLVSERDVIRKCIGQDRHSDSTLVDEIMTVD 79
Query: 139 NKLITVS 145
K + S
Sbjct: 80 PKTVQAS 86
>gi|397729251|ref|ZP_10496038.1| CBS domain pair family protein [Rhodococcus sp. JVH1]
gi|396934858|gb|EJJ01981.1| CBS domain pair family protein [Rhodococcus sp. JVH1]
Length = 142
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + + V + + +HNVGALVV E +V GI+TERD
Sbjct: 3 IADVLRNKGP----AVVTVDPEMPVSTLIGELARHNVGALVVT---ENDAVVGIVTERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMT 136
+R+I +G + +V DIMT
Sbjct: 56 VRRIHERGPDILNARVVDIMT 76
>gi|452949833|gb|EME55299.1| IMP dehydrogenase [Rhodococcus ruber BKS 20-38]
Length = 142
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG D +V + + ++ +HNVGALVVV E +V GI++ERD
Sbjct: 3 IADVLRNKGP----VVATIEPDRSVEEMIGTLARHNVGALVVV---EGDAVIGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMT 136
+R++ G + + +V DIM+
Sbjct: 56 VRRLHHHGPALLAARVRDIMS 76
>gi|326779705|ref|ZP_08238970.1| putative signal transduction protein with CBS domains [Streptomyces
griseus XylebKG-1]
gi|326660038|gb|EGE44884.1| putative signal transduction protein with CBS domains [Streptomyces
griseus XylebKG-1]
Length = 141
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT DI+ + + W +T+ A + M +HNVGAL V G+ + GIIT+R
Sbjct: 2 TTAKDIMHSGAR-------WIPAHETLDRAAQLMREHNVGALPVSANGDSDRMVGIITDR 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTK-VLRAMQ 155
D + + +G GD+ + I D VL MQ
Sbjct: 55 DIVVGCVAKGHDPAKVTAGDLAQGTPRWIEAEADVDAVLEEMQ 97
>gi|402817178|ref|ZP_10866767.1| transcriptional repressor CcpN [Paenibacillus alvei DSM 29]
gi|402505284|gb|EJW15810.1| transcriptional repressor CcpN [Paenibacillus alvei DSM 29]
Length = 182
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV DAV ++ N+G+L+V G + +AGII+ +D L K+ + ++ S V +MT +
Sbjct: 63 TVQDAVVTLFLENIGSLMVTDEGGK--LAGIISRKDLL-KVTLGNPNASSMPVSMVMTRQ 119
Query: 139 NKLITVSPDTKVLRAMQLMTGH 160
++T+SP+ VL A + M H
Sbjct: 120 PNIVTISPEESVLEAARKMIHH 141
>gi|220925558|ref|YP_002500860.1| putative signal transduction protein with CBS domains
[Methylobacterium nodulans ORS 2060]
gi|219950165|gb|ACL60557.1| putative signal transduction protein with CBS domains
[Methylobacterium nodulans ORS 2060]
Length = 156
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 58/100 (58%), Gaps = 6/100 (6%)
Query: 59 ILKAKGKGADGSWLWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
I+++ G+ A L TT + T+ + + + H+VGAL V++ G+ + GII+ERD +
Sbjct: 2 IIRSVGELAMRHSLHSTTCEATITEVCRRLQDHHVGALAVLEDGK---LVGIISERDVIS 58
Query: 118 KIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
++I GR +T V +MT + + T+ + ++ A+Q M
Sbjct: 59 RVIAVGREPTATTVRAVMTPDPQ--TIDCENYLIDALQKM 96
>gi|254453578|ref|ZP_05067015.1| CBS domain protein [Octadecabacter arcticus 238]
gi|198267984|gb|EDY92254.1| CBS domain protein [Octadecabacter arcticus 238]
Length = 145
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S ILK+K A G T+ V DA M+ +G +V+ G + AGI++ERD
Sbjct: 3 VSQILKSK---ATGGVFTLTSYANVADAAAIMSDMRIGTIVISDDG-GATPAGILSERDI 58
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146
+R++ QG S S V D+MT +KL+T P
Sbjct: 59 VRELGKQGPSCMSRLVSDMMT--SKLVTCGP 87
>gi|111017173|ref|YP_700145.1| IMP dehydrogenase [Rhodococcus jostii RHA1]
gi|384099896|ref|ZP_10000967.1| IMP dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|419965476|ref|ZP_14481420.1| IMP dehydrogenase [Rhodococcus opacus M213]
gi|424856737|ref|ZP_18280945.1| IMP dehydrogenase [Rhodococcus opacus PD630]
gi|432350979|ref|ZP_19594303.1| IMP dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
gi|110816703|gb|ABG91987.1| probable IMP dehydrogenase [Rhodococcus jostii RHA1]
gi|356662872|gb|EHI43051.1| IMP dehydrogenase [Rhodococcus opacus PD630]
gi|383842566|gb|EID81829.1| IMP dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|414569104|gb|EKT79853.1| IMP dehydrogenase [Rhodococcus opacus M213]
gi|430769666|gb|ELB85697.1| IMP dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
Length = 142
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + + V + + +HNVGALVV E +V GI+TERD
Sbjct: 3 IADVLRNKGP----AVVTVDPEMPVSTLIGELARHNVGALVVT---ENDAVVGIVTERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMT 136
+R+I +G + +V DIMT
Sbjct: 56 VRRIHERGPDILNARVVDIMT 76
>gi|85714599|ref|ZP_01045586.1| hypothetical protein NB311A_20491 [Nitrobacter sp. Nb-311A]
gi|85698484|gb|EAQ36354.1| hypothetical protein NB311A_20491 [Nitrobacter sp. Nb-311A]
Length = 147
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
E+ +I IL+ KG + + A + N+GALVV + +V G+++
Sbjct: 3 EAMSIESILRQKGTDVT----TIGPEANIKSAAGWLRAKNIGALVVTR---GDTVLGLVS 55
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
ER+ + G ++ S +V +IM + L TVSPD V R M+LMT H
Sbjct: 56 EREIVDAFSRYGEAAGSMRVKEIMP--HGLTTVSPDESVTRVMRLMTHH 102
>gi|20093964|ref|NP_613811.1| CBS domain-containing protein [Methanopyrus kandleri AV19]
gi|19886923|gb|AAM01741.1| CBS domain-containing protein [Methanopyrus kandleri AV19]
Length = 278
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 8/80 (10%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
DTV AV++M + VGAL +VK K + GIITERD + + + T+V +IMTE
Sbjct: 100 DTVRKAVRTMFEFEVGALPIVK---DKKLVGIITERDIMADLY---DVLEDTRVEEIMTE 153
Query: 138 ENKLITVSPDTKVLRAMQLM 157
+ + TV D VL A ++M
Sbjct: 154 DPE--TVPSDITVLEAAEIM 171
>gi|374335199|ref|YP_005091886.1| hypothetical protein GU3_06900 [Oceanimonas sp. GK1]
gi|372984886|gb|AEY01136.1| hypothetical protein GU3_06900 [Oceanimonas sp. GK1]
Length = 623
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGE--QKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+V+DA + MT V +++V+K G ++ VAGIIT+RD LR ++ + +T V ++M+
Sbjct: 168 SVFDAARKMTDEGVSSILVLKEGSDAEQEVAGIITDRD-LRTRVLAEQLPSATPVSEVMS 226
Query: 137 EENKLITVSPDTKVLRAMQLM 157
+ L+ D V AM M
Sbjct: 227 TD--LVAAESDQYVFEAMLTM 245
>gi|171184656|ref|YP_001793575.1| signal-transduction protein [Pyrobaculum neutrophilum V24Sta]
gi|170933868|gb|ACB39129.1| putative signal-transduction protein with CBS domains [Pyrobaculum
neutrophilum V24Sta]
Length = 130
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
S + C D+ V AV M NVG++VV++ + AGIITERD +R +V T
Sbjct: 13 SVVSCYVDEPVECAVAKMYAANVGSVVVLERDGRP--AGIITERDVVR--LVAQEVDLRT 68
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
+G + E L+T SPD VL A M H
Sbjct: 69 PLGQVARRE--LVTASPDESVLSAAVKMVEH 97
>gi|375145476|ref|YP_005007917.1| hypothetical protein [Niastella koreensis GR20-10]
gi|361059522|gb|AEV98513.1| CBS domain containing protein [Niastella koreensis GR20-10]
Length = 152
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ D++ +K + + D V DA+ + Q N+ L+V+ K G+ +E+D
Sbjct: 3 TVDDLIASKPRPEN----IIKPDALVIDALHLLEQVNLSYLIVMDGDAYK---GVFSEKD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
Y R ++++GRSSK V ++MT + L V P+ V M LM
Sbjct: 56 YSRNVVLKGRSSKEAHVQEVMTTD--LPVVGPEETVEHCMILM 96
>gi|387897428|ref|YP_006327724.1| IMP dehydrogenase [Bacillus amyloliquefaciens Y2]
gi|387171538|gb|AFJ60999.1| IMP dehydrogenase [Bacillus amyloliquefaciens Y2]
Length = 129
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVGA+ VV GE K G++T+RD + QGR + T V
Sbjct: 4 VSPNQTIQEAAALMHQHNVGAIPVVDGGELK---GMLTDRDIALRTTAQGRDGQ-TPVSH 59
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGHML 162
+M+ + +++ +P+ + A LM H +
Sbjct: 60 VMS--SAVVSGNPEMSLEEASHLMAQHQI 86
>gi|161524964|ref|YP_001579976.1| XRE family transcriptional regulator [Burkholderia multivorans ATCC
17616]
gi|189350289|ref|YP_001945917.1| putative signal-transduction protein [Burkholderia multivorans ATCC
17616]
gi|221197721|ref|ZP_03570767.1| CBS domain protein [Burkholderia multivorans CGD2M]
gi|221204721|ref|ZP_03577738.1| CBS domain protein [Burkholderia multivorans CGD2]
gi|221214916|ref|ZP_03587884.1| CBS domain protein [Burkholderia multivorans CGD1]
gi|421467912|ref|ZP_15916493.1| CBS domain protein [Burkholderia multivorans ATCC BAA-247]
gi|421475871|ref|ZP_15923803.1| CBS domain protein [Burkholderia multivorans CF2]
gi|160342393|gb|ABX15479.1| putative transcriptional regulator, XRE family [Burkholderia
multivorans ATCC 17616]
gi|189334311|dbj|BAG43381.1| putative signal-transduction protein [Burkholderia multivorans ATCC
17616]
gi|221165143|gb|EED97621.1| CBS domain protein [Burkholderia multivorans CGD1]
gi|221175578|gb|EEE08008.1| CBS domain protein [Burkholderia multivorans CGD2]
gi|221181653|gb|EEE14054.1| CBS domain protein [Burkholderia multivorans CGD2M]
gi|400229504|gb|EJO59351.1| CBS domain protein [Burkholderia multivorans CF2]
gi|400232997|gb|EJO62579.1| CBS domain protein [Burkholderia multivorans ATCC BAA-247]
Length = 151
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 10/102 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + GI+T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDKPLREAVDTMAEHDIGSLVVMEYGD---LVGILTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
+ ++ G + +V +M E +T +P+T V ++M
Sbjct: 56 ILRLRENGGAIGDVQVRKVMDEP---LTCTPETDVNEVRRMM 94
>gi|152974433|ref|YP_001373950.1| signal-transduction protein [Bacillus cytotoxicus NVH 391-98]
gi|152023185|gb|ABS20955.1| putative signal-transduction protein with CBS domains [Bacillus
cytotoxicus NVH 391-98]
Length = 144
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 12/94 (12%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK-- 127
+ + CT D VY+A M + +G + VV + + G++T+RD ++V+G + K
Sbjct: 11 NIVQCTPLDNVYEAAVKMKEEEIGMIPVV---DNNQIVGLVTDRD----LVVRGIAEKHP 63
Query: 128 -STKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
S K+ ++MT +++V+P+ V +A +LM H
Sbjct: 64 GSNKITNVMT--TNIVSVAPNDPVEKATELMARH 95
>gi|395491369|ref|ZP_10422948.1| hypothetical protein SPAM26_06034 [Sphingomonas sp. PAMC 26617]
Length = 143
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI IL KG+ + T D +V AV + + +GA+ V+ + + GI +ERD
Sbjct: 3 TIGAILGGKGR----EVVSVTADQSVRAAVALLAERRIGAVPVL---DGTRIVGIFSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ + QG + V DIMT ITV D V+ A+ LMT
Sbjct: 56 VIYAVASQGNDALGQTVADIMTAPA--ITVGSDEAVIGALSLMT 97
>gi|311067406|ref|YP_003972329.1| oxidoreductase [Bacillus atrophaeus 1942]
gi|419822609|ref|ZP_14346188.1| putative oxidoreductase [Bacillus atrophaeus C89]
gi|310867923|gb|ADP31398.1| putative oxidoreductase [Bacillus atrophaeus 1942]
gi|388473323|gb|EIM10067.1| putative oxidoreductase [Bacillus atrophaeus C89]
Length = 140
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+++ T+ +A M QHNVGA+ VV +Q + G++T+RD + QGR + T V +
Sbjct: 15 VSSNQTIQEAAALMHQHNVGAIPVV---DQGVLQGMLTDRDIALRTTAQGRDGQ-TPVSE 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
+M+ +I+ +P+ + A +LM H + LP
Sbjct: 71 VMSS--NVISGNPNMSLEEASELMAQHQIRRLP 101
>gi|402820645|ref|ZP_10870212.1| hypothetical protein IMCC14465_14460 [alpha proteobacterium
IMCC14465]
gi|402511388|gb|EJW21650.1| hypothetical protein IMCC14465_14460 [alpha proteobacterium
IMCC14465]
Length = 143
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 65 KGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124
KG D L + + + DA+ + +VG LV P E +AG+I+ERD +R + G
Sbjct: 10 KGTD--VLTIDSSNKLSDAIAVLENRSVGILVATSPDEP--LAGVISERDVVRALSNHGA 65
Query: 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
S+ + D M+ + +T++ +T V+ AM++MT
Sbjct: 66 SALDRPISDFMS--SNPVTINLETTVVEAMEIMT 97
>gi|20093963|ref|NP_613810.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
gi|20178342|sp|P50100.2|Y525_METKA RecName: Full=Uncharacterized protein MK0525; AltName: Full=OrfX
gi|19886922|gb|AAM01740.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
Length = 196
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+T + M +H +G++V+V E+ GIITERD + K++ QG++ DIM++
Sbjct: 21 ETAVEIAYKMREHGIGSVVIV--NEKDEPIGIITERDLVIKVVSQGKNPDEVIARDIMSQ 78
Query: 138 ENKLITVSPDTKVLRAMQLM 157
+ITV D +V A++LM
Sbjct: 79 --PVITVEEDMEVNEAVKLM 96
>gi|124248201|emb|CAL26197.1| conserved hypothetical protein YhcV [Bacillus amyloliquefaciens
FZB42]
Length = 156
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ T+ +A M QHNVGA+ VV GE K G++T+RD + QGR + T V +M+
Sbjct: 34 NQTIQEAAALMHQHNVGAIPVVDGGELK---GMLTDRDIALRTTAQGRDGQ-TPVSHVMS 89
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML 162
+ +++ +P+ + A LM H +
Sbjct: 90 --SAVVSGNPEMSLEEASHLMAQHQI 113
>gi|154685383|ref|YP_001420544.1| hypothetical protein RBAM_009490 [Bacillus amyloliquefaciens FZB42]
gi|384264485|ref|YP_005420192.1| protein YhcV [Bacillus amyloliquefaciens subsp. plantarum YAU
B9601-Y2]
gi|394992297|ref|ZP_10385083.1| YhcV [Bacillus sp. 916]
gi|429504420|ref|YP_007185604.1| protein YhcV [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
gi|154351234|gb|ABS73313.1| YhcV [Bacillus amyloliquefaciens FZB42]
gi|380497838|emb|CCG48876.1| YhcV [Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|393806874|gb|EJD68207.1| YhcV [Bacillus sp. 916]
gi|429486010|gb|AFZ89934.1| protein YhcV [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
Length = 140
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVGA+ VV GE K G++T+RD + QGR + T V
Sbjct: 15 VSPNQTIQEAAALMHQHNVGAIPVVDGGELK---GMLTDRDIALRTTAQGRDGQ-TPVSH 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
+M+ + +++ +P+ + A LM H + LP
Sbjct: 71 VMS--SAVVSGNPEMSLEEASHLMAQHQIRRLP 101
>gi|54024538|ref|YP_118780.1| hypothetical protein nfa25690 [Nocardia farcinica IFM 10152]
gi|54016046|dbj|BAD57416.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 144
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I++IL+ KG T TV + + +HN+GA VVV PG + ++GI++ERD
Sbjct: 3 IAEILRRKGC----EVATVTPGTTVRALLAVLAEHNIGA-VVVSPGGGR-ISGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
+R + G T V DIMT + T +P+ +V ++MT H
Sbjct: 57 VRGLHEYGAGLLDTPVSDIMTTPVR--TCAPEDRVDGLRRIMTEH 99
>gi|296269591|ref|YP_003652223.1| putative CBS domain-containing signal transduction protein
[Thermobispora bispora DSM 43833]
gi|296092378|gb|ADG88330.1| putative signal transduction protein with CBS domains
[Thermobispora bispora DSM 43833]
Length = 142
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I DIL+ KG + D TV + + + + N+GA+VV G ++AGI++ERD
Sbjct: 3 IRDILRKKGS----AVATVRPDATVRELLAKLAELNIGAVVVSPDG--NAIAGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
+R++ +G V +IMT E + T +P+T V + MT + +
Sbjct: 57 VRRLHERGAGLLDAPVSEIMTVEVR--TCAPETTVDELRRTMTEYRI 101
>gi|350265192|ref|YP_004876499.1| CBS domain pair sporulation protein YhcV [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|349598079|gb|AEP85867.1| CBS domain pair sporulation protein YhcV [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 140
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ T+ +A M QHNVG + VV EQ + G++T+RD + QGR + T V ++M+
Sbjct: 18 NQTIQEAASLMKQHNVGVIPVV---EQGVLKGMLTDRDIALRTTAQGRDGQ-TPVSEVMS 73
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML 162
+ L++ +P+ + A QLM H +
Sbjct: 74 TD--LVSGNPNMSLEDASQLMAQHQI 97
>gi|388456933|ref|ZP_10139228.1| hypothetical protein FdumT_10182 [Fluoribacter dumoffii Tex-KL]
Length = 146
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DD V ++ MT++++GALVV+ Q + GI++ERD +R + + ++ KVGD++
Sbjct: 22 DDPVKKSIDMMTEYDIGALVVMDNENQ--LVGIVSERDIVRSCLHKCIDLETAKVGDVV- 78
Query: 137 EENKLITVSPDTKVL-RAMQLMTG 159
NK +T+ V+ +AMQ MT
Sbjct: 79 --NKDVTILYSNDVVEKAMQAMTA 100
>gi|429191078|ref|YP_007176756.1| signal transduction protein [Natronobacterium gregoryi SP2]
gi|448327351|ref|ZP_21516681.1| signal-transduction protein containing camp-binding and cbs domains
[Natronobacterium gregoryi SP2]
gi|429135296|gb|AFZ72307.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Natronobacterium gregoryi SP2]
gi|445608584|gb|ELY62418.1| signal-transduction protein containing camp-binding and cbs domains
[Natronobacterium gregoryi SP2]
Length = 140
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T+ +AV +M + +G++VVV PG + GI+T D LR G S + +V D MT E
Sbjct: 19 TLREAVGTMLEEQIGSIVVVDPG----MVGIVTRSDILRTQHQTGLSLEELRVQDAMTSE 74
Query: 139 NKLITVSPDTKVLRAMQLMTGH 160
+ ++ VSP V A + MT H
Sbjct: 75 D-VVKVSPTNGVDEAAEAMTEH 95
>gi|357413771|ref|YP_004925507.1| signal transduction protein with CBS domains [Streptomyces
flavogriseus ATCC 33331]
gi|320011140|gb|ADW05990.1| putative signal transduction protein with CBS domains [Streptomyces
flavogriseus ATCC 33331]
Length = 141
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
W +T+ A + M H VGAL V GE+ + GIIT+RD + K + G + G
Sbjct: 14 WIPAHETLDRAAQMMRDHTVGALPVSAGGEKDRMVGIITDRDIVTKCVASGHDPSTVTAG 73
Query: 133 DIMTEENKLITVSPDTK-VLRAMQ 155
++ + I S D VL MQ
Sbjct: 74 ELCDGTPRWIESSADVDAVLETMQ 97
>gi|326509897|dbj|BAJ87164.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 550
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 11/83 (13%)
Query: 78 DTVYDAVKSMTQHNVGALVVV---KPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
DTV A K M + V + VV KPG GI+T RD L ++I Q +ST VG +
Sbjct: 245 DTVLTASKKMLELKVSSAVVAIENKPG------GILTSRDILMRVIAQNLPPESTTVGKV 298
Query: 135 MTEENKLITVSPDTKVLRAMQLM 157
MT+ + T+ DT +L A+ M
Sbjct: 299 MTQSPECATI--DTPILEALHTM 319
>gi|314935156|ref|ZP_07842509.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus hominis
subsp. hominis C80]
gi|313656491|gb|EFS20230.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus hominis
subsp. hominis C80]
Length = 488
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T D++VY+A M ++ + + +VK E +++ GIIT RD LR I S K+
Sbjct: 100 FFLTPDESVYEAEALMGKYRISGVPIVKDEESRTLVGIITNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT+EN LIT T + A ++ H +
Sbjct: 154 SDVMTKEN-LITAPVGTTLDEAEAILQKHKI 183
>gi|455651104|gb|EMF29856.1| oxidoreductase [Streptomyces gancidicus BKS 13-15]
Length = 141
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D +V +A + M N+G +VV + + V G++T+RD + + +GR + VG + T
Sbjct: 19 DASVVEAARLMRGQNIGDVVV---ADGQRVVGVVTDRDITVRAVAEGRDPYAVSVGSVCT 75
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML 162
+ +T++PD V A+ LM H +
Sbjct: 76 PDP--LTLAPDDPVASAVALMREHAV 99
>gi|418618879|ref|ZP_13181731.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus hominis
VCU122]
gi|374826448|gb|EHR90345.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus hominis
VCU122]
Length = 488
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T D++VY+A M ++ + + +VK E +++ GIIT RD LR I S K+
Sbjct: 100 FFLTPDESVYEAEALMGKYRISGVPIVKDEESRTLVGIITNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT+EN LIT T + A ++ H +
Sbjct: 154 SDVMTKEN-LITAPVGTTLDEAEAILQKHKI 183
>gi|422647303|ref|ZP_16710432.1| CBS domain-containing protein [Pseudomonas syringae pv. maculicola
str. ES4326]
gi|330960846|gb|EGH61106.1| CBS domain-containing protein [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 146
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A++ M + N+GAL VVK V G+++ERDY RK++++GRSS T V +IM+
Sbjct: 24 DQMVLEALRLMAEKNIGALPVVK---DGVVVGVVSERDYARKMVLKGRSSVGTPVSEIMS 80
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+K+ITV V M +MT
Sbjct: 81 --SKVITVDSQQTVETCMGIMT 100
>gi|289193183|ref|YP_003459124.1| signal transduction protein with CBS domains [Methanocaldococcus
sp. FS406-22]
gi|288939633|gb|ADC70388.1| putative signal transduction protein with CBS domains
[Methanocaldococcus sp. FS406-22]
Length = 186
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D +VYD K M + +V ++VV G+ T++D +++++++ S KV DI +
Sbjct: 20 DVSVYDVAKLMVEQDVPCVLVVCERPNHESIGVATDKDIIKRVLIKKLSPDKVKVEDISS 79
Query: 137 EENKLITVSPDTKVLRAMQLMTGH 160
KL+T+ P+T + A+++M +
Sbjct: 80 --GKLVTIPPNTTIDEALKIMNKY 101
>gi|366164213|ref|ZP_09463968.1| signal-transduction protein [Acetivibrio cellulolyticus CD2]
Length = 139
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ +TV +A + M + NVG++ V +Q V G++T+RD + + + G+ + TKV
Sbjct: 13 YVNPSNTVVEAAQLMQKLNVGSVPVF---DQNKVVGVVTDRDIVVRNVAHGKIPQDTKVQ 69
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT + + TV+PD V ++M +
Sbjct: 70 DVMTSQ--VTTVTPDMDVDEVSRIMAQQQI 97
>gi|307594841|ref|YP_003901158.1| putative CBS domain-containing signal transduction protein
[Vulcanisaeta distributa DSM 14429]
gi|307550042|gb|ADN50107.1| putative signal transduction protein with CBS domains [Vulcanisaeta
distributa DSM 14429]
Length = 146
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 9/91 (9%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR--SSKST 129
L + T+ +A+ M++ NVG LV+V + G+I+ERD +R + +G+ ++K T
Sbjct: 14 LVINENATIKEAINIMSRENVGLLVIVNNAGKP--IGVISERDIIRA-LARGKDLNAKVT 70
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
+VG + KL+T+SP + +A LM H
Sbjct: 71 EVGTV----GKLVTISPRDSIYKAALLMNDH 97
>gi|430743766|ref|YP_007202895.1| signal transduction protein [Singulisphaera acidiphila DSM 18658]
gi|430015486|gb|AGA27200.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Singulisphaera acidiphila DSM 18658]
Length = 144
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ D+LK+KG G + + TV +A+ M Q+N+G+L VV Q + GII+ERD
Sbjct: 3 VRDVLKSKG----GQIISIEPEATVAEAIARMVQNNIGSLPVVDA--QDHLIGIISERDL 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
LR I G V + M+ + +T D V M M+
Sbjct: 57 LRGIHNHGEKICGKHVAEFMSRDP--VTCELDANVNDVMGQMS 97
>gi|156938201|ref|YP_001435997.1| hypothetical protein Igni_1414 [Ignicoccus hospitalis KIN4/I]
gi|156567185|gb|ABU82590.1| CBS domain containing protein [Ignicoccus hospitalis KIN4/I]
Length = 127
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+WC + T+ + V M HNVG+++++ E + GI TERD +R + V
Sbjct: 12 VWCPPNSTLKEVVHKMRAHNVGSVLILNGDE---LVGIFTERDLVRAF--DEGAKPEDLV 66
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGH 160
D MT I V+P+ + A+Q M H
Sbjct: 67 SDFMTRNP--IVVNPEESLESALQKMLAH 93
>gi|14520325|ref|NP_125800.1| inosine-5'-monophosphate dehydrogenase related [Pyrococcus abyssi
GE5]
gi|5457540|emb|CAB49031.1| guaB-like2 inosine-5'-monophosphate dehydrogenase related
[Pyrococcus abyssi GE5]
gi|380740849|tpe|CCE69483.1| TPA: inosine-5'-monophosphate dehydrogenase related [Pyrococcus
abyssi GE5]
Length = 136
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D TV +A K M + +VG+LVVV ++ +V G T+ D +R++IV G S V +IMT
Sbjct: 21 DTTVQEASKLMMEFDVGSLVVV--DDEGNVVGFFTKSDIIRRVIVPGLSY-DIPVKEIMT 77
Query: 137 EENKLITVSPDTKVLRAMQLMTGH 160
+E LITV+ +T + ++ M+ H
Sbjct: 78 KE--LITVNANTPLGDVLKKMSEH 99
>gi|145351763|ref|XP_001420233.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580467|gb|ABO98526.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 110
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 8/62 (12%)
Query: 108 GIITERDYLRKIIVQGRSSKSTKVGDIMTEEN-------KLITVSPDTKVLRAMQLMTGH 160
GI+TERDYL + +G S STKV ++MT KL++VSP+ VL AM+ MT +
Sbjct: 1 GILTERDYLNAV-ARGFISASTKVSEVMTSFRDASKKIAKLVSVSPEDSVLAAMESMTNN 59
Query: 161 ML 162
L
Sbjct: 60 RL 61
>gi|304315352|ref|YP_003850499.1| CBS domain-containing protein [Methanothermobacter marburgensis
str. Marburg]
gi|302588811|gb|ADL59186.1| CBS domain-containing protein [Methanothermobacter marburgensis
str. Marburg]
Length = 272
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS 128
G + D +A M ++N+G+L V+ GE + GI+T+ D L I +GR+ +
Sbjct: 82 GELITADPDMDAGNAASLMLENNIGSLPVILDGE---ILGIVTKSDILD--ICRGRAYEK 136
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLM 157
GD+M+ E +ITVSP +V+ A ++M
Sbjct: 137 YTAGDVMSTE--MITVSPQERVVHARRMM 163
>gi|338737266|ref|YP_004674228.1| signal transduction protein [Hyphomicrobium sp. MC1]
gi|337757829|emb|CCB63652.1| Putative signal transduction protein with CBS domains (fragment)
[Hyphomicrobium sp. MC1]
Length = 145
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ +ILKAK + L DDT+ V+ + VGA+VV + G+ ++ GII+ERD
Sbjct: 3 VQNILKAK---KNAHVLTVRPDDTILKLVQMLRAEGVGAMVVSRDGQ--ALDGIISERDV 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R + + + +MT E ++T SP + LMT
Sbjct: 58 VRALATNENRLLALPISALMTHE--IVTCSPGDTIAHVTHLMT 98
>gi|326804264|ref|YP_004322082.1| transcriptional repressor CcpN [Aerococcus urinae ACS-120-V-Col10a]
gi|326651490|gb|AEA01673.1| transcriptional repressor CcpN [Aerococcus urinae ACS-120-V-Col10a]
Length = 209
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS 128
S + T TVY+A+ +M ++ G+L V E + + G+++ +D LR + +G+ ++S
Sbjct: 82 ASPVNITAKTTVYEAITTMFLYDNGSLYVTD--EDQRLQGLVSRKDLLRSLATKGQ-TES 138
Query: 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
V IMT ++ V DT VL A +L+ H
Sbjct: 139 PAVALIMTRMPNIVVVEKDTLVLEAGKLLVDH 170
>gi|114330974|ref|YP_747196.1| signal-transduction protein [Nitrosomonas eutropha C91]
gi|114307988|gb|ABI59231.1| putative signal-transduction protein with CBS domains [Nitrosomonas
eutropha C91]
Length = 149
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSV-AGIITERDYLRKIIVQGRSSKSTKVGDIM 135
D +V +A + M Q++VGAL+V+ + + G+IT+RD + +++ G ++ V D+M
Sbjct: 17 DGSVLEAARMMRQYHVGALIVIDKVNDRVIPVGVITDRDLVVEVLATGLDKEAITVDDVM 76
Query: 136 TEENKLITVSPDTKVLRAMQLM 157
T+E L V +T + A+ M
Sbjct: 77 TQE--LFAVKENTAIHDAINFM 96
>gi|1002715|gb|AAA92086.1| similar to the inosine monophosphate dehydrogenase from Pyrococcus
furiosus (SwissProt Accession Number P42851); orfX
protein; Method: conceptual translation supplied by
author, partial [Methanopyrus kandleri]
Length = 172
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+T + M +H +G++V+V E+ GIITERD + K++ QG++ DIM++
Sbjct: 21 ETAVEIAYKMREHGIGSVVIV--NEKDEPIGIITERDLVIKVVSQGKNPDEVIARDIMSQ 78
Query: 138 ENKLITVSPDTKVLRAMQLM 157
+ITV D +V A++LM
Sbjct: 79 --PVITVEEDMEVNEAVKLM 96
>gi|84490210|ref|YP_448442.1| hypothetical protein Msp_1428 [Methanosphaera stadtmanae DSM 3091]
gi|84373529|gb|ABC57799.1| conserved hypothetical protein [Methanosphaera stadtmanae DSM 3091]
Length = 274
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 14/117 (11%)
Query: 41 VSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKP 100
++SA+ EE IS I+ G + D+ +K M +++G + ++
Sbjct: 58 IASAKYEEVPLSHMRISTIMT-------GDVITGAPSDSKVKILKLMVDNHIGGIPII-- 108
Query: 101 GEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
+ + G++T+ D+LR V + T + DIMT N++ITVSPD +++ A +LM
Sbjct: 109 -DDNDIVGMVTKTDFLRN--VDTKPYDETPIKDIMT--NRVITVSPDDRLVHARRLM 160
>gi|163760297|ref|ZP_02167380.1| hypothetical protein HPDFL43_08544 [Hoeflea phototrophica DFL-43]
gi|162282696|gb|EDQ32984.1| hypothetical protein HPDFL43_08544 [Hoeflea phototrophica DFL-43]
Length = 142
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKL 141
DAV+ + + +GA+VV G + +AGI++ERD +R I +G + S + DIMT +K+
Sbjct: 25 DAVRFLADNKIGAVVVTGAGGK--IAGILSERDIVRAIASRGADALSAPIYDIMT--SKV 80
Query: 142 ITVSPDTKVLRAMQLMT 158
T V + M+LMT
Sbjct: 81 TTCGESHTVNQVMELMT 97
>gi|385264036|ref|ZP_10042123.1| CBS domain-containing protein [Bacillus sp. 5B6]
gi|385148532|gb|EIF12469.1| CBS domain-containing protein [Bacillus sp. 5B6]
Length = 140
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ T+ +A M QHNVGA+ VV GE K G++T+RD + QGR + T V +M+
Sbjct: 18 NQTIQEAAALMHQHNVGAIPVVDGGELK---GMLTDRDIALRTTAQGRDGQ-TPVSHVMS 73
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML--LP 164
+ +++ +P+ + A LM H + LP
Sbjct: 74 --STVVSGNPEMSLEEASHLMAQHQIRRLP 101
>gi|427403130|ref|ZP_18894127.1| hypothetical protein HMPREF9710_03723 [Massilia timonae CCUG 45783]
gi|425718141|gb|EKU81093.1| hypothetical protein HMPREF9710_03723 [Massilia timonae CCUG 45783]
Length = 149
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVA-GIITERDYLRKIIVQGRSSKSTK 130
+ CT D+TV A M +H+VG LVV+ +V GI+T+RD + +I G S
Sbjct: 12 ICCTRDETVQGAAMLMRRHHVGDLVVIDTDGGGNVPLGILTDRDIVLAVIAPGLDPASLL 71
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLM 157
GDIM+++ L+T V ++ M
Sbjct: 72 AGDIMSDD--LLTAGESDDVYETIEHM 96
>gi|62184858|ref|YP_219643.1| hypothetical protein CAB215 [Chlamydophila abortus S26/3]
gi|62147925|emb|CAH63672.1| conserved hypothetical protein [Chlamydophila abortus S26/3]
Length = 329
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 60 LKAKGKGADGSWL-----WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
LK GK D +L +C+ +DT+ D++ + + G + +V E+ + GI T+ D
Sbjct: 196 LKVIGKIRDYMFLKTEVPFCSPEDTIADSLDIFSSYGCGCVCIVN--EKFEILGIFTDGD 253
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
R + G S ++ D+MT ++I S D VL +Q+M
Sbjct: 254 LRRALARHGGDILSQRLQDVMTPNPRVI--SEDADVLLGLQMM 294
>gi|392963161|ref|ZP_10328587.1| CBS domain containing protein [Pelosinus fermentans DSM 17108]
gi|392450985|gb|EIW27979.1| CBS domain containing protein [Pelosinus fermentans DSM 17108]
Length = 210
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 31 RPVVSSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQH 90
+P V F ++ F++ I+D L A + + TVYDA+ ++
Sbjct: 52 KPKVGYYFTGRDLQQLNTMSFDAILIADTLSAP--------IVVRENSTVYDAILTLFTE 103
Query: 91 NVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKV 150
+VG + VV E + G ++ +D L K + G+++ V IMT K+I +P+ V
Sbjct: 104 DVGTIFVV--SEDNFLEGALSRKDLL-KAAMGGKNNNDLPVNIIMTRMPKIILTTPEESV 160
Query: 151 LRAMQLMTGH 160
L A Q + H
Sbjct: 161 LSAAQKLLYH 170
>gi|452965016|gb|EME70046.1| CBS domain-containing protein [Magnetospirillum sp. SO-1]
Length = 146
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
ILK+K +GA + D +V DA + + H +GA++V+ G++ VAGI++ERD +R
Sbjct: 6 ILKSKARGA--GIISVPPDASVGDAARLLATHKIGAVLVMN-GDR--VAGILSERDIVRG 60
Query: 119 IIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTG 159
+ + +V D+MT E + D V R M++MT
Sbjct: 61 LADAVDVCITARVKDLMTAE--VFVCHEDDTVERLMEIMTA 99
>gi|300781343|ref|ZP_07091197.1| signal-transduction protein [Corynebacterium genitalium ATCC 33030]
gi|300533050|gb|EFK54111.1| signal-transduction protein [Corynebacterium genitalium ATCC 33030]
Length = 616
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 72/136 (52%), Gaps = 22/136 (16%)
Query: 32 PVVSSRFESVS---SARMEE---HGFEST---TISDILKAKGKGADGSWLWCTTDDTVYD 82
P + FES+S +AR E G T T+SD+++ G+ + D+++
Sbjct: 120 PDIKRFFESLSRRVAARAHEINDPGNSDTLRMTVSDMIRM------GNLVTARFDESIRA 173
Query: 83 AVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLI 142
+ M + NV ++V+ E GI+T+RD ++++ +G + S +V ++MT +
Sbjct: 174 TAEKMVEANVSSIVICGGAE----TGILTDRDLRKRVVAKGLDT-SVQVAEVMTAPVR-- 226
Query: 143 TVSPDTKVLRAMQLMT 158
T++PDTK+ AM +++
Sbjct: 227 TIAPDTKLFEAMLILS 242
>gi|421056732|ref|ZP_15519649.1| CBS domain containing protein [Pelosinus fermentans B4]
gi|421060188|ref|ZP_15522697.1| CBS domain containing protein [Pelosinus fermentans B3]
gi|421063276|ref|ZP_15525272.1| CBS domain containing protein [Pelosinus fermentans A12]
gi|392437912|gb|EIW15774.1| CBS domain containing protein [Pelosinus fermentans B4]
gi|392457590|gb|EIW34234.1| CBS domain containing protein [Pelosinus fermentans B3]
gi|392463123|gb|EIW39110.1| CBS domain containing protein [Pelosinus fermentans A12]
Length = 166
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 31 RPVVSSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQH 90
+P V F ++ F++ I+D L A + + TVYDA+ ++
Sbjct: 8 KPKVGYYFTGRDLQQLNTMSFDAILIADTLSAP--------IVVRENSTVYDAILTLFTE 59
Query: 91 NVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKV 150
+VG + VV E + G ++ +D L K + G+++ V IMT K+I +P+ V
Sbjct: 60 DVGTIFVV--SEDNFLEGALSRKDLL-KAAMGGKNNNDLPVNIIMTRMPKIILTTPEESV 116
Query: 151 LRAMQLMTGH 160
L A Q + H
Sbjct: 117 LSAAQKLLYH 126
>gi|345862311|ref|ZP_08814540.1| CBS domain pair family protein [Desulfosporosinus sp. OT]
gi|344324598|gb|EGW36147.1| CBS domain pair family protein [Desulfosporosinus sp. OT]
Length = 141
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
W T D ++ + + M + +VG++ + K E + GIIT+RD + ++ G +KST
Sbjct: 13 WVTPDASIVEVARLMKKDDVGSIPICKGNE---LVGIITDRDIVLNVVATGGDTKSTSAK 69
Query: 133 DIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
DIM+ K +T + D V A LM+ + + LP
Sbjct: 70 DIMSTNIKSVTSNQD--VHEAADLMSKYQIRRLP 101
>gi|375141344|ref|YP_005001993.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium rhodesiae NBB3]
gi|359821965|gb|AEV74778.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium rhodesiae NBB3]
Length = 142
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG S T + +V + ++ HN+GA+VVV P V GI++ERD
Sbjct: 3 IADVLRNKG----ASVATITPETSVSGLLTELSVHNIGAMVVVSP---DGVIGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R + +G V +IMT + T +P+ V LMT
Sbjct: 56 VRALQTRGAELLRMPVSEIMT--TFVATCTPNDTVDSLSALMT 96
>gi|315426567|dbj|BAJ48197.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
gi|343485287|dbj|BAJ50941.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
Length = 152
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV +A M + + G L+V + + GI TERD +R+++ G TKV D+M+
Sbjct: 19 TVREAAILMDRLDTGYLLV---KSEDKLVGIFTERDAVRRVLATGLDHTRTKVADVMS-- 73
Query: 139 NKLITVSPDTKVLRAMQLMTGH 160
+I VSPDT V A+ LM H
Sbjct: 74 FPVIGVSPDTSVEDAVVLMAMH 95
>gi|397574548|gb|EJK49266.1| hypothetical protein THAOC_31880 [Thalassiosira oceanica]
Length = 253
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 20/91 (21%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQ--------------------KSVAGIITERDYL 116
D V +AV+ + +NVGALV + +++G+++ERDY+
Sbjct: 55 DSPVIEAVEKLAAYNVGALVTTDVQGKCHCHCVISVRRAFRLHLLGTGNLSGVLSERDYV 114
Query: 117 RKIIVQGRSSKSTKVGDIMTEENKLITVSPD 147
KI + RSSK KV +I T+ L+T SP+
Sbjct: 115 TKIALLERSSKEVKVKEISTKAANLVTASPE 145
>gi|333979997|ref|YP_004517942.1| transcriptional regulator [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823478|gb|AEG16141.1| transcriptional regulator [Desulfotomaculum kuznetsovii DSM 6115]
Length = 212
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+VYDAV +M +VG L+VV+ G + G+I+ +D L KI + G+ VG +MT
Sbjct: 92 SVYDAVVTMFIEDVGTLIVVREG--GILEGVISRKDLL-KITLGGQDIHKLPVGVVMTRM 148
Query: 139 NKLITVSPDTKV-LRAMQLMT 158
+ITV PD V L A +L+T
Sbjct: 149 PNVITVGPDDSVWLAAKKLIT 169
>gi|389878299|ref|YP_006371864.1| hypothetical protein TMO_2442 [Tistrella mobilis KA081020-065]
gi|388529083|gb|AFK54280.1| hypothetical protein TMO_2442 [Tistrella mobilis KA081020-065]
Length = 144
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ IL+ KG+ + T+ A++ + Q N+GAL VV+ G + G+++ERD
Sbjct: 3 VEHILRRKGR----RIAIVDPEATISRALEILAQDNIGALPVVRDGR---IVGMLSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
R ++ +G + T V ++MT +L T P+T + M +MT
Sbjct: 56 ARGLVDRGAALLDTPVTELMT--TRLTTCRPETTIEELMTMMT 96
>gi|300853495|ref|YP_003778479.1| hypothetical protein CLJU_c02930 [Clostridium ljungdahlii DSM
13528]
gi|300433610|gb|ADK13377.1| conserved hypothetical protein containing CBS domain [Clostridium
ljungdahlii DSM 13528]
Length = 142
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
S + DDTV A + M Q+N+GA+ V K G+ V GI+T+RD + Q ++S
Sbjct: 10 SVISLNDDDTVEKAAQIMQQNNIGAVPVCKNGK---VIGIVTDRDIAIRSASQSGGTESK 66
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
V DIM+ +T SPD + A ++M+ + LP
Sbjct: 67 FVRDIMSAN--PVTGSPDMNLEDASRIMSDKQIRRLP 101
>gi|325969076|ref|YP_004245268.1| signal-transduction protein with CBS domains [Vulcanisaeta
moutnovskia 768-28]
gi|323708279|gb|ADY01766.1| putative signal-transduction protein with CBS domains [Vulcanisaeta
moutnovskia 768-28]
Length = 146
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR--SSKST 129
L + + V DAV M++ NVG LV+V + G+I+ERD + K + +G+ ++K T
Sbjct: 14 LVISENARVKDAVNIMSRENVGILVIVNNAGKP--IGVISERDVI-KALARGKDLNAKVT 70
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
+VG + LITV P + RA LM H
Sbjct: 71 EVGTV----GNLITVGPKDSIYRAALLMNDH 97
>gi|158314906|ref|YP_001507414.1| signal-transduction protein [Frankia sp. EAN1pec]
gi|158110311|gb|ABW12508.1| putative signal-transduction protein with CBS domains [Frankia sp.
EAN1pec]
Length = 139
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D + +A + M N G ++V+ VAGI+T+RD +++ +GR + T ++ T
Sbjct: 19 DQPIAEAARRMKTVNAGDVIVLD--NTGRVAGIVTDRDITLRVVAEGRDPERTATREVCT 76
Query: 137 EENKLITVSPDTKVLRAMQLM 157
+ LIT++PDT A+QL+
Sbjct: 77 QTG-LITIAPDTTTDTAVQLI 96
>gi|414153969|ref|ZP_11410290.1| CBS domain-containing protein yhcV [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411454501|emb|CCO08194.1| CBS domain-containing protein yhcV [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 144
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV +A + M+Q+NVG++ VV G GI+T+RD + + QG + +TKV +MT
Sbjct: 21 TVQEAAQLMSQYNVGSVPVVDNGR---CVGIVTDRDIALRAVSQGHNPSTTKVQTVMTA- 76
Query: 139 NKLITVSPDTKVLRAMQLM 157
++T +P V A LM
Sbjct: 77 -GVVTGTPQMDVHEAANLM 94
>gi|394993831|ref|ZP_10386571.1| YlbB [Bacillus sp. 916]
gi|393805402|gb|EJD66781.1| YlbB [Bacillus sp. 916]
Length = 147
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D VY+A M +VGA+ +V + ++ GI+T+RD ++++G +SK S
Sbjct: 14 YCTVLDNVYEAAVKMKDADVGAIPIVDE-DGATLVGIVTDRD----LVLRGIASKKPNSQ 68
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
K+ D MTE ++I+ V + LM H L
Sbjct: 69 KITDAMTE--RVISAEEGASVEEVLHLMAEHQL 99
>gi|222100218|ref|YP_002534786.1| Inosine-5'-monophosphate dehydrogenase [Thermotoga neapolitana DSM
4359]
gi|221572608|gb|ACM23420.1| Inosine-5'-monophosphate dehydrogenase [Thermotoga neapolitana DSM
4359]
Length = 487
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T D TV +AV M+++ +G L VV E+ + G++T RD ++ + S K+
Sbjct: 99 ITVTPDMTVKEAVDLMSEYKIGGLPVVD--EEGKLVGLLTNRD------IRFERNLSKKI 150
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT KLI PD + +A +++ H +
Sbjct: 151 KDLMTPREKLIVAPPDISLEKAKEILHEHRI 181
>gi|167043446|gb|ABZ08148.1| putative CBS domain protein [uncultured marine microorganism
HF4000_APKG1C9]
Length = 147
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
C + ++ DA + M ++ G + VV ++ + G+IT+RD + + +G S++ T+VG
Sbjct: 13 CCKENQSLQDAARLMIDNDCGQIPVVD--DEGGLVGVITDRDVCCRAVAEGMSAE-TRVG 69
Query: 133 DIMTEENKLITVSPDTKVLRAMQLM 157
D+MT +++V+PDT + + M
Sbjct: 70 DVMTR--SVVSVTPDTSLEDCLASM 92
>gi|85375415|ref|YP_459477.1| hypothetical protein ELI_12940 [Erythrobacter litoralis HTCC2594]
gi|84788498|gb|ABC64680.1| hypothetical protein ELI_12940 [Erythrobacter litoralis HTCC2594]
Length = 143
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 67 ADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSS 126
A + C V +A+ + +GA+ V++ G S+AGI +ERD + ++ +G S
Sbjct: 11 AAADVITCDAHQPVREAIALLASKRIGAVPVMENG---SIAGIFSERDVIYRMAEEGTSC 67
Query: 127 KSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
VG +MT ITV TKV A+ LMT
Sbjct: 68 LDKLVGQVMT--APAITVEKSTKVDEALALMT 97
>gi|307942056|ref|ZP_07657407.1| CBS domain-containing protein [Roseibium sp. TrichSKD4]
gi|307774342|gb|EFO33552.1| CBS domain-containing protein [Roseibium sp. TrichSKD4]
Length = 173
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 66 GADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRS 125
G G + +++++AV + + +GAL+V G+ +AGI++ERD +R++
Sbjct: 40 GKQGDVFSISPSNSLHEAVVMLREKGIGALIV--KGDDGKLAGILSERDIVRRLADTPGQ 97
Query: 126 SKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ KV DIMT+ + T PD ++ +Q MT
Sbjct: 98 TLGQKVEDIMTKSVQ--TCEPDDALISVLQRMT 128
>gi|312136466|ref|YP_004003803.1| signal transduction protein with cbs domains [Methanothermus
fervidus DSM 2088]
gi|311224185|gb|ADP77041.1| putative signal transduction protein with CBS domains
[Methanothermus fervidus DSM 2088]
Length = 312
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ T D++ DAV+ M +H+VGAL VV + V GI++ERD++ ++ G ++ V
Sbjct: 120 YITNKDSIKDAVEKMLKHDVGALPVVD--NENRVVGIVSERDFV--FLMAGLINEEP-VA 174
Query: 133 DIMTEENKLITVSPDTKVLRAMQLM 157
D MTE IT +P T + ++M
Sbjct: 175 DYMTENP--ITTTPGTPIESVSKIM 197
>gi|256811136|ref|YP_003128505.1| hypothetical protein Mefer_1196 [Methanocaldococcus fervens AG86]
gi|256794336|gb|ACV25005.1| CBS domain containing membrane protein [Methanocaldococcus fervens
AG86]
Length = 176
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ + D +VYD K M + ++ +++V++ K G+ T+ D + K++++ K+
Sbjct: 15 IIVSGDISVYDVAKLMVKDDMPSVLVIRGKPNKERIGVATDEDLINKVLIKKLPPDKVKI 74
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLM 157
DI + +KL+ + PDT + A+++M
Sbjct: 75 EDIAS--DKLVIIPPDTPIDEALRIM 98
>gi|209966508|ref|YP_002299423.1| hypothetical protein RC1_3249 [Rhodospirillum centenum SW]
gi|209959974|gb|ACJ00611.1| CBS domain protein [Rhodospirillum centenum SW]
Length = 138
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ + D +V A + M + +VGAL V GE + GI+T+RD L +++ QGR +T V
Sbjct: 13 FLSPDASVQQAARLMAELDVGALPV---GEAADLRGILTDRDVLIRVVAQGRDPATTPVA 69
Query: 133 DIMTEE 138
+M+ +
Sbjct: 70 AVMSSD 75
>gi|374998260|ref|YP_004973759.1| hypothetical protein AZOLI_p10295 [Azospirillum lipoferum 4B]
gi|357425685|emb|CBS88581.1| conserved protein of unknown function, cystathionine beta synthase
domain [Azospirillum lipoferum 4B]
Length = 151
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 76 TDDTVYDAVKSMTQHNVGALVV--VKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
T TV +A+ M N+ ALVV V E ++AG+++ERD + ++ +G S V
Sbjct: 19 TSATVAEAIGLMKAENISALVVKDVCRTEGNTLAGVLSERDIVHALLDRGAPLLSMPVSQ 78
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGH 160
+MT + +T +P V +A+QLM H
Sbjct: 79 LMTRQP--VTCAPSDSVRQALQLMDRH 103
>gi|406671680|ref|ZP_11078919.1| hypothetical protein HMPREF9706_01179 [Facklamia hominis CCUG
36813]
gi|405580930|gb|EKB54989.1| hypothetical protein HMPREF9706_01179 [Facklamia hominis CCUG
36813]
Length = 204
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+V +A+ + ++ G+L ++ P +Q ++ G+++ +D LR I Q T +G IMT
Sbjct: 92 SVNEAITQLFMYDAGSLYIIDPNDQ-TLQGLVSRKDLLRSSIGQ---PADTPLGVIMTRM 147
Query: 139 NKLITVSPDTKVLRAMQLMTGH 160
+I + PD VL A +L+ H
Sbjct: 148 PNIIVIQPDQSVLEAARLIAQH 169
>gi|288960069|ref|YP_003450409.1| hypothetical protein AZL_a03340 [Azospirillum sp. B510]
gi|288912377|dbj|BAI73865.1| hypothetical protein AZL_a03340 [Azospirillum sp. B510]
Length = 151
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 76 TDDTVYDAVKSMTQHNVGALVV--VKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
T TV DA++ M N+ AL+V V E ++AG+++ERD + ++ +G + V
Sbjct: 19 TSATVADAIRLMKAENISALIVKDVCRTEGNTLAGVLSERDIVHALLERGAPLLAMPVSQ 78
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGH 160
+MT + +T +P V A+ LM H
Sbjct: 79 LMTRQP--VTCAPSDSVREALHLMDKH 103
>gi|83719350|ref|YP_443131.1| CBS domain-containing protein [Burkholderia thailandensis E264]
gi|167582140|ref|ZP_02375014.1| CBS domain protein [Burkholderia thailandensis TXDOH]
gi|167620299|ref|ZP_02388930.1| CBS domain protein [Burkholderia thailandensis Bt4]
gi|257139361|ref|ZP_05587623.1| CBS domain-containing protein [Burkholderia thailandensis E264]
gi|83653175|gb|ABC37238.1| CBS domain protein [Burkholderia thailandensis E264]
Length = 154
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 14/104 (13%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + AV +M +H++G+LVV++ G+ + GI+T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTPLRSAVDTMAEHDIGSLVVMEYGD---LVGILTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIM--TEENKLITVSPDTKVLRAMQLM 157
+ ++ G S VGD++ T ++ +T +P+T + ++M
Sbjct: 56 ILRLKANGGS-----VGDVLVRTVMDEPLTCTPETDIDEVRRMM 94
>gi|451339062|ref|ZP_21909587.1| Inosine-5'-monophosphate dehydrogenase [Amycolatopsis azurea DSM
43854]
gi|449418235|gb|EMD23833.1| Inosine-5'-monophosphate dehydrogenase [Amycolatopsis azurea DSM
43854]
Length = 143
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 10/104 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG + + + V + ++ + +HNVGALVVV ++ + GI++ERD
Sbjct: 3 ISDLLRNKG----AAVATVSPETNVTELLERLAEHNVGALVVVD--DEGGIVGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLI-TVSPDTKVLRAMQLMT 158
+R++ +G V IMT KL+ + +P+ V + LMT
Sbjct: 57 VRRLNERGPQLLDGSVAAIMT---KLVASCTPEDSVDQLSVLMT 97
>gi|390571435|ref|ZP_10251676.1| CBS domain-containing protein [Burkholderia terrae BS001]
gi|420248667|ref|ZP_14751984.1| CBS domain-containing protein [Burkholderia sp. BT03]
gi|389936538|gb|EIM98425.1| CBS domain-containing protein [Burkholderia terrae BS001]
gi|398067357|gb|EJL58875.1| CBS domain-containing protein [Burkholderia sp. BT03]
Length = 155
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 58/105 (55%), Gaps = 9/105 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKLKGN----TLFTVTPDSPLNEAVNTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
+ + G S + + +M ++ +T +P+T V ++M H
Sbjct: 56 ILVLSRNGGSVGGSTIRKVM--DDHPLTCTPETDVNEVRRMMLEH 98
>gi|289435208|ref|YP_003465080.1| hypothetical protein lse_1845 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|422419481|ref|ZP_16496436.1| CBS domain-containing protein [Listeria seeligeri FSL N1-067]
gi|422422571|ref|ZP_16499524.1| CBS domain-containing protein [Listeria seeligeri FSL S4-171]
gi|289171452|emb|CBH27996.1| CBS domain protein [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|313632713|gb|EFR99684.1| CBS domain-containing protein [Listeria seeligeri FSL N1-067]
gi|313637269|gb|EFS02773.1| CBS domain-containing protein [Listeria seeligeri FSL S4-171]
Length = 209
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ + +VYDA+ + ++G+L V+ +++ + G+++ +D L+ + +K+T +
Sbjct: 88 FFAKKETSVYDAIVMLFMEDIGSLYVI---DEEELVGLVSRKDLLKGALADA-DTKATPI 143
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
IMT LITV+ + KVL A + + H +
Sbjct: 144 ATIMTRMPNLITVTKNDKVLHAAEQLVFHQI 174
>gi|333909359|ref|YP_004482945.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Marinomonas posidonica
IVIA-Po-181]
gi|333479365|gb|AEF56026.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Marinomonas posidonica
IVIA-Po-181]
Length = 621
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 61/106 (57%), Gaps = 13/106 (12%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
ST+IS I+ + AD S ++V MT+ V +++++ E +S+ GI+T+
Sbjct: 153 STSISHIMTRQLVQADPS-------ESVQTIAMRMTEARVSSILIL---ENESLLGIVTD 202
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
RD +I+ G S+++ V DIMT + +T+SPD V++A LM+
Sbjct: 203 RDLRSRILALGGSAQAV-VSDIMT--HSPVTLSPDALVMQAQTLMS 245
>gi|430762359|ref|YP_007218216.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Thioalkalivibrio nitratireducens DSM 14787]
gi|430011983|gb|AGA34735.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Thioalkalivibrio nitratireducens DSM 14787]
Length = 618
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D T+ D + M++ V AL+V+ E + GI+T+ D ++ + GR S+ +G IM+
Sbjct: 167 DATIQDGARHMSEQEVSALLVMADDE---LIGIVTDHDLRKRCLATGR-SRQEPIGSIMS 222
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
++L +V+P+T A+ LM+
Sbjct: 223 --SRLQSVTPETPAFEALLLMS 242
>gi|126458985|ref|YP_001055263.1| signal-transduction protein [Pyrobaculum calidifontis JCM 11548]
gi|126248706|gb|ABO07797.1| putative signal-transduction protein with CBS domains [Pyrobaculum
calidifontis JCM 11548]
Length = 139
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 64 GKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
G A + T+D T+Y+A + M QH VG LVVV K G+++ERD +R I
Sbjct: 4 GDLASRPPVTITSDATLYEAAEKMAQHKVGLLVVVDKANPKKPIGVVSERDVIRAI 59
>gi|15644099|ref|NP_229148.1| inosine-5'-monophosphate dehydrogenase [Thermotoga maritima MSB8]
gi|148270565|ref|YP_001245025.1| inosine-5'-monophosphate dehydrogenase [Thermotoga petrophila
RKU-1]
gi|418045404|ref|ZP_12683499.1| inosine-5'-monophosphate dehydrogenase [Thermotoga maritima MSB8]
gi|4981907|gb|AAD36418.1|AE001789_3 inosine-5'-monophosphate dehydrogenase [Thermotoga maritima MSB8]
gi|147736109|gb|ABQ47449.1| inosine-5'-monophosphate dehydrogenase [Thermotoga petrophila
RKU-1]
gi|351676289|gb|EHA59442.1| inosine-5'-monophosphate dehydrogenase [Thermotoga maritima MSB8]
Length = 482
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T D TV +A+ M ++ +G L VV E+ + G++T RD V+ + S K+
Sbjct: 94 ITVTPDMTVKEAIDLMAEYKIGGLPVVD--EEGRLVGLLTNRD------VRFEKNLSKKI 145
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT KLI PD + +A +++ H +
Sbjct: 146 KDLMTPREKLIVAPPDISLEKAKEILHQHRI 176
>gi|281412873|ref|YP_003346952.1| inosine-5'-monophosphate dehydrogenase [Thermotoga naphthophila
RKU-10]
gi|281373976|gb|ADA67538.1| inosine-5'-monophosphate dehydrogenase [Thermotoga naphthophila
RKU-10]
Length = 482
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T D TV +A+ M ++ +G L VV E+ + G++T RD V+ + S K+
Sbjct: 94 ITVTPDMTVKEAIDLMAEYKIGGLPVVD--EEGRLVGLLTNRD------VRFEKNLSKKI 145
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT KLI PD + +A +++ H +
Sbjct: 146 KDLMTPREKLIVAPPDISLEKAKEILHQHRI 176
>gi|312109160|ref|YP_003987476.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. Y4.1MC1]
gi|311214261|gb|ADP72865.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. Y4.1MC1]
Length = 488
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D +K +G + T + VYDA M+++ + + +V E++ + GIIT RD LR
Sbjct: 86 DKVKRSERGVITDPFFLTPEHQVYDAEHLMSKYRISGVPIVNNEEEQKLVGIITNRD-LR 144
Query: 118 KIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
I STK+ D+MT+EN LIT T + A +++
Sbjct: 145 FI-----QDYSTKISDVMTKEN-LITAPVGTTLEEAEKIL 178
>gi|416978034|ref|ZP_11937767.1| putative signal-transduction protein [Burkholderia sp. TJI49]
gi|325520023|gb|EGC99252.1| putative signal-transduction protein [Burkholderia sp. TJI49]
Length = 151
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 57/102 (55%), Gaps = 10/102 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDKPLREAVDTMAEHDIGSLVVMEYGD---LVGMLTFREV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
+ ++ G + +V +M E +T +P+T V ++M
Sbjct: 56 ILRLHENGGAIGDVQVRKVMDEP---LTCTPETDVNEVRRMM 94
>gi|150016817|ref|YP_001309071.1| signal-transduction protein [Clostridium beijerinckii NCIMB 8052]
gi|149903282|gb|ABR34115.1| putative signal-transduction protein with CBS domains [Clostridium
beijerinckii NCIMB 8052]
Length = 144
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
++D++ A + M Q +VGA+ V + G+IT+RD + G S+ K+ D
Sbjct: 15 NSEDSIERAAQMMRQFDVGAIPVCD--NSNKLVGMITDRDIALDCVASGASADQQKICDY 72
Query: 135 MTEENKLITVSPDTKVLRAMQLMTGHML 162
MT + +T SPD V A++LM+ H +
Sbjct: 73 MT--SNPVTGSPDMDVHDAVRLMSRHQI 98
>gi|350561987|ref|ZP_08930824.1| putative signal transduction protein with CBS domains
[Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349780305|gb|EGZ34640.1| putative signal transduction protein with CBS domains
[Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 619
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D T+ D + M++ V AL+V+ E + GI+T+ D ++ + GR S+ +G IM+
Sbjct: 168 DATIQDGARHMSEQEVSALLVMADDE---LIGIVTDHDLRKRCLATGR-SRQEPIGSIMS 223
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+ L TV+P+T A+ LM+
Sbjct: 224 --SGLQTVTPETPAFEALLLMS 243
>gi|336233555|ref|YP_004586171.1| inosine-5'-monophosphate dehydrogenase [Geobacillus
thermoglucosidasius C56-YS93]
gi|423718281|ref|ZP_17692463.1| inosine-5'-monophosphate dehydrogenase [Geobacillus
thermoglucosidans TNO-09.020]
gi|335360410|gb|AEH46090.1| inosine-5'-monophosphate dehydrogenase [Geobacillus
thermoglucosidasius C56-YS93]
gi|383365292|gb|EID42589.1| inosine-5'-monophosphate dehydrogenase [Geobacillus
thermoglucosidans TNO-09.020]
Length = 488
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D +K +G + T + VYDA M+++ + + +V E++ + GIIT RD LR
Sbjct: 86 DKVKRSERGVITDPFFLTPEHQVYDAEHLMSKYRISGVPIVNNEEEQKLVGIITNRD-LR 144
Query: 118 KIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
I STK+ D+MT+EN LIT T + A +++
Sbjct: 145 FI-----QDYSTKISDVMTKEN-LITAPVGTTLEEAEKIL 178
>gi|421078662|ref|ZP_15539615.1| CBS domain containing protein [Pelosinus fermentans JBW45]
gi|392523513|gb|EIW46686.1| CBS domain containing protein [Pelosinus fermentans JBW45]
Length = 166
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 31 RPVVSSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQH 90
+P V F ++ F++ I+D L S + + TVYDA+ ++
Sbjct: 8 KPKVGYYFTGRDLQQLNTMSFDAILIADTL--------SSPIVVRENSTVYDAIVTLFTE 59
Query: 91 NVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKV 150
+VG + VV E + G ++ +D L K + G+++ V IMT K+I +P+ V
Sbjct: 60 DVGTIFVV--SEDNFLEGALSRKDLL-KAAMGGKNNNDLPVNIIMTRMPKIILTTPEESV 116
Query: 151 LRAMQLMTGH 160
L A Q + H
Sbjct: 117 LSAAQKLLYH 126
>gi|357013611|ref|ZP_09078610.1| CBS domain-containing protein [Paenibacillus elgii B69]
Length = 222
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+V DAV + NVG+L+VV ++ ++G+I+ +D L K + ++ S V +MT E
Sbjct: 100 SVNDAVVMLFMENVGSLIVVD--DEACLSGVISRKDLL-KFTLGNTNAASMPVSMVMTRE 156
Query: 139 NKLITVSPDTKVLRAMQLMTGH 160
+I VSPD V+ A + M H
Sbjct: 157 PNVIHVSPDESVIDAARKMIHH 178
>gi|393769455|ref|ZP_10357977.1| signal-transduction protein [Methylobacterium sp. GXF4]
gi|392724926|gb|EIZ82269.1| signal-transduction protein [Methylobacterium sp. GXF4]
Length = 143
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ IL KG S + + D T+ + ++ + + +GALVV SVAGII+ERD
Sbjct: 2 TVARILAEKGS----SVVTVSPDKTLEEVIQILAEKRIGALVVAHA--DGSVAGIISERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R + G ++ V D MT + + T T + M LMT
Sbjct: 56 IMRALARHGGATFDAPVSDHMTAD--VTTCGKSTTIEEVMGLMT 97
>gi|237755790|ref|ZP_04584392.1| cyclic nucleotide binding protein [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237692053|gb|EEP61059.1| cyclic nucleotide binding protein [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 600
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 8/87 (9%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVV-VKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ D T+YDAVK MT+ +++V + GE GIIT+ D +K+I+Q S+ S V
Sbjct: 153 SKDTTIYDAVKEMTEKGAYSVIVDFRNGEY----GIITDSDIRKKVILQNISA-SENVEK 207
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGH 160
I T+ LIT++ D+ + A+ LM H
Sbjct: 208 IATK--GLITINADSFLFDAIFLMIKH 232
>gi|383781302|ref|YP_005465869.1| hypothetical protein AMIS_61330 [Actinoplanes missouriensis 431]
gi|381374535|dbj|BAL91353.1| hypothetical protein AMIS_61330 [Actinoplanes missouriensis 431]
Length = 137
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+T+ DA + M++ NVG+L + GE + G++T+RD + K + QGR++ + ++
Sbjct: 19 ETLADAARKMSELNVGSLPIC--GEDNRLHGMLTDRDIVIKALAQGRNAADVRASELA-- 74
Query: 138 ENKLITVSPDTKVLRAMQLMTGH 160
+ K ITV D ++ M+ H
Sbjct: 75 QGKPITVGADDDAAEILRTMSQH 97
>gi|229819321|ref|YP_002880847.1| hypothetical protein Bcav_0824 [Beutenbergia cavernae DSM 12333]
gi|229565234|gb|ACQ79085.1| CBS domain containing membrane protein [Beutenbergia cavernae DSM
12333]
Length = 143
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVV-VKPGEQKSVAGIITERD 114
I+D+++ KG + + TV + V + +GALVV V GE +V+GI++ERD
Sbjct: 3 IADVIRRKG----ADVFTVSPETTVAELVAELDSRRIGALVVSVDGGE--TVSGIVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R + V G + V DIMTE K+ T P+ ++ + MT
Sbjct: 57 VVRHLHVDGAAVLQRPVADIMTE--KVETCVPEDEIESLARRMT 98
>gi|170289271|ref|YP_001739509.1| inosine-5'-monophosphate dehydrogenase [Thermotoga sp. RQ2]
gi|170176774|gb|ACB09826.1| inosine-5'-monophosphate dehydrogenase [Thermotoga sp. RQ2]
Length = 482
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T D TV +A+ M ++ +G L VV E+ + G++T RD V+ + S K+
Sbjct: 94 ITVTPDMTVKEAIDLMAEYKIGGLPVVD--EEGRLVGLLTNRD------VRFEKNLSKKI 145
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT KLI PD + +A +++ H +
Sbjct: 146 KDLMTPREKLIVAPPDISLEKAKEILHQHRI 176
>gi|62738150|pdb|1VRD|A Chain A, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase (Tm1347) From Thermotoga Maritima At 2.18
A Resolution
gi|62738151|pdb|1VRD|B Chain B, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase (Tm1347) From Thermotoga Maritima At 2.18
A Resolution
Length = 494
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T D TV +A+ M ++ +G L VV E+ + G++T RD V+ + S K+
Sbjct: 106 ITVTPDMTVKEAIDLMAEYKIGGLPVVD--EEGRLVGLLTNRD------VRFEKNLSKKI 157
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT KLI PD + +A +++ H +
Sbjct: 158 KDLMTPREKLIVAPPDISLEKAKEILHQHRI 188
>gi|334134791|ref|ZP_08508293.1| CBS domain protein [Paenibacillus sp. HGF7]
gi|333607635|gb|EGL18947.1| CBS domain protein [Paenibacillus sp. HGF7]
Length = 144
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 14/99 (14%)
Query: 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK--- 127
+ T D VY+ M QH++G + VV E + G++T+RD ++V+G + K
Sbjct: 12 CVTVTLQDNVYEIAVKMKQHDIGFIPVV---EGSKLIGVVTDRD----LVVRGYAEKHSG 64
Query: 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
ST V +++E L T+SP+T V A ++M H + LP
Sbjct: 65 STAVKKVISE--NLTTISPETDVQEAAKVMAQHQVRRLP 101
>gi|120404861|ref|YP_954690.1| signal-transduction protein [Mycobacterium vanbaalenii PYR-1]
gi|119957679|gb|ABM14684.1| putative signal-transduction protein with CBS domains
[Mycobacterium vanbaalenii PYR-1]
Length = 142
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG + T + +V + ++ HN+GA+VVV P + GI++ERD
Sbjct: 3 ISDVLRNKG----ATVATITPETSVAGLLTELSVHNIGAMVVVSP---DGLLGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
+RK+ G V +IM+ + T +PD V LMT +
Sbjct: 56 VRKLHDMGADLLRRPVSEIMS--TLVATCTPDDTVDSLSALMTNN 98
>gi|328951426|ref|YP_004368761.1| hypothetical protein Marky_1921 [Marinithermus hydrothermalis DSM
14884]
gi|328451750|gb|AEB12651.1| protein of unknown function DUF1486 [Marinithermus hydrothermalis
DSM 14884]
Length = 556
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
+ +A + M ++N+G +VV G+ G++T+RD +++ QG K TKV +MT E
Sbjct: 20 IAEACRLMEENNIGCVVVSDNGKP---LGLVTDRDLTLRVLRQGMDPKKTKVEQVMTRE- 75
Query: 140 KLITVSPDTKVLRAMQLMTG 159
++T++ D +L A++ + G
Sbjct: 76 -VLTLNEDMGLLEALEAVRG 94
>gi|167562988|ref|ZP_02355904.1| CBS domain protein [Burkholderia oklahomensis EO147]
gi|167570179|ref|ZP_02363053.1| CBS domain protein [Burkholderia oklahomensis C6786]
Length = 154
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 10/102 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + GI+T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDMPLRNAVDTMAEHDIGSLVVMEYGD---LVGILTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
+ ++ G S V +M E +T +P+T + ++M
Sbjct: 56 ILRLKANGGSIGEVLVRTVMDEP---LTCTPETDIDEVRRMM 94
>gi|304322067|ref|YP_003855710.1| hypothetical protein PB2503_12654 [Parvularcula bermudensis
HTCC2503]
gi|303300969|gb|ADM10568.1| hypothetical protein PB2503_12654 [Parvularcula bermudensis
HTCC2503]
Length = 144
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D+LK KG+ + ++ +A++ + N+GA+VV PG K+VAGI++ERD +R
Sbjct: 5 DMLKDKGR----DVVTIDHKASLAEAIEVLASKNIGAVVVTSPG--KAVAGILSERDVVR 58
Query: 118 KIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ + + V DIMT E + T + V + + LMT
Sbjct: 59 VLSGAPTGFRESPVTDIMTRE--VFTAGLEASVDQLLDLMT 97
>gi|218289151|ref|ZP_03493387.1| putative signal-transduction protein with CBS domains
[Alicyclobacillus acidocaldarius LAA1]
gi|218240734|gb|EED07913.1| putative signal-transduction protein with CBS domains
[Alicyclobacillus acidocaldarius LAA1]
Length = 240
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV+DAV +M +VG L+V ++ + G+++ +D+L K + S+ S VG IMT
Sbjct: 123 TVHDAVITMFLEDVGGLIVAD--DEGRLQGVVSRKDFL-KFTLGNASATSLPVGMIMTRY 179
Query: 139 NKLITVSPDTKVLRAMQLM 157
+ TV+PD +V+ A + M
Sbjct: 180 PHIETVTPDDRVVDAAKRM 198
>gi|392380710|ref|YP_005029906.1| conserved protein of unknown function; CBS domain [Azospirillum
brasilense Sp245]
gi|356875674|emb|CCC96422.1| conserved protein of unknown function; CBS domain [Azospirillum
brasilense Sp245]
Length = 142
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ D++K++ + T D +V K M + N+GA++VV G+ + GI+TERD
Sbjct: 6 VPDVVKSQ------ELILVTEDTSVLTVSKLMAEKNIGAVLVVNHGD---LVGIVTERDL 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
K++ + T+V IMT T+ PD + A+ LM
Sbjct: 57 NNKVLSTQIDAFETEVSAIMTRNPD--TLPPDADAIEALTLM 96
>gi|218248399|ref|YP_002373770.1| hypothetical protein PCC8801_3652 [Cyanothece sp. PCC 8801]
gi|257061465|ref|YP_003139353.1| hypothetical protein Cyan8802_3706 [Cyanothece sp. PCC 8802]
gi|218168877|gb|ACK67614.1| CBS domain containing protein [Cyanothece sp. PCC 8801]
gi|256591631|gb|ACV02518.1| CBS domain containing protein [Cyanothece sp. PCC 8802]
Length = 208
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV AVK M + V +L+V + Q + GIITE D + K++ G+ K+ +V +IMT+
Sbjct: 20 TVAQAVKLMEEQGVLSLIVNRRHPQDAY-GIITETDIINKVVAYGKDPKTIRVYEIMTK- 77
Query: 139 NKLITVSPDTKVLRAMQLM 157
I V+PD V A +L
Sbjct: 78 -PCIVVNPDLAVEYAARLF 95
>gi|51893134|ref|YP_075825.1| hypothetical protein STH1996 [Symbiobacterium thermophilum IAM
14863]
gi|51856823|dbj|BAD40981.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 142
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C D V + + M + + G + VV G VAG+IT+RD + + + +GR ++T +
Sbjct: 14 CAPDTPVSEVARIMEEADCGFVPVVDGGR---VAGVITDRDIVLRAVARGRDIRTTTARE 70
Query: 134 IMTEENKLITVSPDTKVLRAMQLM 157
MT + +TV PDT A LM
Sbjct: 71 CMT--SPAVTVGPDTDAHAAADLM 92
>gi|344999277|ref|YP_004802131.1| CBS domain containing protein [Streptomyces sp. SirexAA-E]
gi|344314903|gb|AEN09591.1| CBS domain containing protein [Streptomyces sp. SirexAA-E]
Length = 141
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT DI+ + W +T+ A + M H VGAL V GEQ + GI+T+R
Sbjct: 2 TTAKDIMSTGAQ-------WIPAHETLDRAAQMMRDHKVGALPVSANGEQDRMVGIVTDR 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTK-VLRAMQ 155
D + K + G GD+ + I + + + VL MQ
Sbjct: 55 DIVIKCVAAGHDPSKVTAGDLCDGTPRWIDATAEVEAVLDEMQ 97
>gi|254467423|ref|ZP_05080833.1| CBS domain protein [Rhodobacterales bacterium Y4I]
gi|206684424|gb|EDZ44907.1| CBS domain protein [Rhodobacterales bacterium Y4I]
Length = 174
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 49 HGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAG 108
HG +T++ +L+AKG + +DTV AV+++ +GALVV + ++ G
Sbjct: 30 HG--QSTVAKLLEAKGD----AIFAIRPNDTVGHAVEALRDKRIGALVVTD--QNGALQG 81
Query: 109 IITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
I++ERD +R++ + V DIMT E K T PD ++ ++M
Sbjct: 82 ILSERDIVRRLAETPGHTLPQLVEDIMTREVK--TCKPDDLLIDVAKVMN 129
>gi|119871770|ref|YP_929777.1| signal-transduction protein [Pyrobaculum islandicum DSM 4184]
gi|119673178|gb|ABL87434.1| putative signal-transduction protein with CBS domains [Pyrobaculum
islandicum DSM 4184]
Length = 136
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+T+ + M ++N+GA+VV+ P + K GIITERD ++ V ST V T
Sbjct: 23 ETLVGVAEKMAENNIGAVVVISPQDPKKPVGIITERDIVKA--VSMHMPLSTPVEAFAT- 79
Query: 138 ENKLITVSPDTKVLRAMQLM 157
N+LIT+ + V +A +LM
Sbjct: 80 -NRLITIDENETVEKAAELM 98
>gi|167587382|ref|ZP_02379770.1| putative transcriptional regulator, XRE family protein
[Burkholderia ubonensis Bu]
Length = 154
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 57/102 (55%), Gaps = 10/102 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTPLREAVDTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
+ ++ G + +V +M E +T +P+T V ++M
Sbjct: 56 ILRLRENGGAIGEVQVRKVMDEP---LTCTPETDVNEVRRMM 94
>gi|365845115|ref|ZP_09385911.1| CBS domain protein [Flavonifractor plautii ATCC 29863]
gi|364561834|gb|EHM39711.1| CBS domain protein [Flavonifractor plautii ATCC 29863]
Length = 145
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 83 AVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLI 142
A + +++HNVG+L V GE + GI+T+RD + + + T+V DIMT
Sbjct: 23 AARLLSRHNVGSLPVC--GEDGGLRGIVTDRDIILRCVAAEEDPLKTQVKDIMT--RNCA 78
Query: 143 TVSPDTKVLRAMQLMTG 159
VSPD A +LM
Sbjct: 79 VVSPDDDAREATRLMAA 95
>gi|92116457|ref|YP_576186.1| XRE family transcriptional regulator [Nitrobacter hamburgensis X14]
gi|91799351|gb|ABE61726.1| putative transcriptional regulator, XRE family [Nitrobacter
hamburgensis X14]
Length = 170
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
E+ +I IL+ KG + + A + N+GALVV ++ G+I+
Sbjct: 26 EAMSIESILRRKGTDVT----TIGPEANIKSAAGWLRAKNIGALVVTSG---DAILGLIS 78
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
ER+ + G ++ S +V +IM + + TVSPD V R M LMT H
Sbjct: 79 EREIVDAFFRYGETAGSMRVKEIM--QRGVTTVSPDESVTRVMNLMTHH 125
>gi|15679237|ref|NP_276354.1| inosine-5'-monophosphate dehydrogenase [Methanothermobacter
thermautotrophicus str. Delta H]
gi|2622337|gb|AAB85715.1| inosine-5'-monophosphate dehydrogenase related protein V
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 187
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+V +A MT+ VG+++V E + G+ITE D +RK++ + + VG++MT
Sbjct: 25 SVAEAASIMTEKKVGSIIVKSNSEPE---GLITESDIIRKVVSRDLRASEVTVGEVMT-- 79
Query: 139 NKLITVSPDTKVLRAMQLMTGH 160
LI++ PD ++ A +LM +
Sbjct: 80 RNLISIEPDRELSEAARLMAKN 101
>gi|418324058|ref|ZP_12935310.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus pettenkoferi
VCU012]
gi|365227716|gb|EHM68905.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus pettenkoferi
VCU012]
Length = 488
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T D+ V++A M+++ + + +V+ E + AGIIT RD LR I S K+
Sbjct: 100 FFLTPDEKVFEAEALMSKYRISGVPIVEDAETRKFAGIITNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT+E+ L+T T + A +L+ H +
Sbjct: 154 SDVMTKED-LVTAPVGTTLSEAEELLQKHKI 183
>gi|156937391|ref|YP_001435187.1| signal transduction protein [Ignicoccus hospitalis KIN4/I]
gi|156566375|gb|ABU81780.1| putative signal transduction protein with CBS domains [Ignicoccus
hospitalis KIN4/I]
Length = 138
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
L + D++V D K M +H G+ +V+ E + GI+TERD L + +G K
Sbjct: 20 LVVSPDESVVDVAKKMLEHGYGSALVI---EDDKLIGIVTERDLLYA-LSEGEEGVKLKA 75
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLM 157
D+MTE+ I+V T ++ A+++M
Sbjct: 76 SDVMTEDP--ISVKAKTDIMEAIKIM 99
>gi|53719576|ref|YP_108562.1| hypothetical protein BPSL1964 [Burkholderia pseudomallei K96243]
gi|53725416|ref|YP_102671.1| hypothetical protein BMA0944 [Burkholderia mallei ATCC 23344]
gi|67642694|ref|ZP_00441447.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
gi|76808985|ref|YP_333265.1| CBS domain-containing protein [Burkholderia pseudomallei 1710b]
gi|121599268|ref|YP_992809.1| hypothetical protein BMASAVP1_A1478 [Burkholderia mallei SAVP1]
gi|124383341|ref|YP_001026403.1| hypothetical protein BMA10229_A0404 [Burkholderia mallei NCTC
10229]
gi|126439295|ref|YP_001058728.1| hypothetical protein BURPS668_1687 [Burkholderia pseudomallei 668]
gi|126451035|ref|YP_001080325.1| hypothetical protein BMA10247_0759 [Burkholderia mallei NCTC 10247]
gi|126454211|ref|YP_001065981.1| hypothetical protein BURPS1106A_1710 [Burkholderia pseudomallei
1106a]
gi|134282216|ref|ZP_01768921.1| CBS domain protein [Burkholderia pseudomallei 305]
gi|167002921|ref|ZP_02268711.1| CBS domain protein [Burkholderia mallei PRL-20]
gi|167719875|ref|ZP_02403111.1| CBS domain protein [Burkholderia pseudomallei DM98]
gi|167738877|ref|ZP_02411651.1| CBS domain protein [Burkholderia pseudomallei 14]
gi|167816100|ref|ZP_02447780.1| CBS domain protein [Burkholderia pseudomallei 91]
gi|167824472|ref|ZP_02455943.1| CBS domain protein [Burkholderia pseudomallei 9]
gi|167846008|ref|ZP_02471516.1| CBS domain protein [Burkholderia pseudomallei B7210]
gi|167894582|ref|ZP_02481984.1| CBS domain protein [Burkholderia pseudomallei 7894]
gi|167902984|ref|ZP_02490189.1| CBS domain protein [Burkholderia pseudomallei NCTC 13177]
gi|167911224|ref|ZP_02498315.1| CBS domain protein [Burkholderia pseudomallei 112]
gi|167919245|ref|ZP_02506336.1| CBS domain protein [Burkholderia pseudomallei BCC215]
gi|217423669|ref|ZP_03455170.1| CBS domain protein [Burkholderia pseudomallei 576]
gi|226192922|ref|ZP_03788534.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
gi|237811993|ref|YP_002896444.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
gi|242315143|ref|ZP_04814159.1| CBS domain protein [Burkholderia pseudomallei 1106b]
gi|254178427|ref|ZP_04885082.1| CBS domain protein [Burkholderia mallei ATCC 10399]
gi|254180023|ref|ZP_04886622.1| CBS domain protein [Burkholderia pseudomallei 1655]
gi|254188567|ref|ZP_04895078.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|254197241|ref|ZP_04903663.1| CBS domain protein [Burkholderia pseudomallei S13]
gi|254199608|ref|ZP_04905974.1| CBS domain protein [Burkholderia mallei FMH]
gi|254205926|ref|ZP_04912278.1| CBS domain protein [Burkholderia mallei JHU]
gi|254261201|ref|ZP_04952255.1| CBS domain protein [Burkholderia pseudomallei 1710a]
gi|254297857|ref|ZP_04965310.1| CBS domain protein [Burkholderia pseudomallei 406e]
gi|254358673|ref|ZP_04974946.1| CBS domain protein [Burkholderia mallei 2002721280]
gi|386861998|ref|YP_006274947.1| hypothetical protein BP1026B_I1931 [Burkholderia pseudomallei
1026b]
gi|403518411|ref|YP_006652544.1| hypothetical protein BPC006_I1757 [Burkholderia pseudomallei
BPC006]
gi|418387564|ref|ZP_12967419.1| CBS domain-containing protein [Burkholderia pseudomallei 354a]
gi|418534145|ref|ZP_13099994.1| CBS domain-containing protein [Burkholderia pseudomallei 1026a]
gi|418541190|ref|ZP_13106687.1| CBS domain-containing protein [Burkholderia pseudomallei 1258a]
gi|418547430|ref|ZP_13112589.1| CBS domain-containing protein [Burkholderia pseudomallei 1258b]
gi|418553610|ref|ZP_13118429.1| CBS domain-containing protein [Burkholderia pseudomallei 354e]
gi|52209990|emb|CAH35963.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
gi|52428839|gb|AAU49432.1| CBS domain protein [Burkholderia mallei ATCC 23344]
gi|76578438|gb|ABA47913.1| CBS domain protein [Burkholderia pseudomallei 1710b]
gi|121228078|gb|ABM50596.1| CBS domain protein [Burkholderia mallei SAVP1]
gi|124291361|gb|ABN00630.1| CBS domain protein [Burkholderia mallei NCTC 10229]
gi|126218788|gb|ABN82294.1| CBS domain protein [Burkholderia pseudomallei 668]
gi|126227853|gb|ABN91393.1| CBS domain protein [Burkholderia pseudomallei 1106a]
gi|126243905|gb|ABO06998.1| CBS domain protein [Burkholderia mallei NCTC 10247]
gi|134246254|gb|EBA46343.1| CBS domain protein [Burkholderia pseudomallei 305]
gi|147749204|gb|EDK56278.1| CBS domain protein [Burkholderia mallei FMH]
gi|147753369|gb|EDK60434.1| CBS domain protein [Burkholderia mallei JHU]
gi|148027800|gb|EDK85821.1| CBS domain protein [Burkholderia mallei 2002721280]
gi|157807702|gb|EDO84872.1| CBS domain protein [Burkholderia pseudomallei 406e]
gi|157936246|gb|EDO91916.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|160699466|gb|EDP89436.1| CBS domain protein [Burkholderia mallei ATCC 10399]
gi|169653982|gb|EDS86675.1| CBS domain protein [Burkholderia pseudomallei S13]
gi|184210563|gb|EDU07606.1| CBS domain protein [Burkholderia pseudomallei 1655]
gi|217393527|gb|EEC33548.1| CBS domain protein [Burkholderia pseudomallei 576]
gi|225935012|gb|EEH30987.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
gi|237503401|gb|ACQ95719.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
gi|238523883|gb|EEP87319.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
gi|242138382|gb|EES24784.1| CBS domain protein [Burkholderia pseudomallei 1106b]
gi|243061467|gb|EES43653.1| CBS domain protein [Burkholderia mallei PRL-20]
gi|254219890|gb|EET09274.1| CBS domain protein [Burkholderia pseudomallei 1710a]
gi|385358699|gb|EIF64684.1| CBS domain-containing protein [Burkholderia pseudomallei 1258a]
gi|385360004|gb|EIF65950.1| CBS domain-containing protein [Burkholderia pseudomallei 1026a]
gi|385361215|gb|EIF67103.1| CBS domain-containing protein [Burkholderia pseudomallei 1258b]
gi|385371448|gb|EIF76627.1| CBS domain-containing protein [Burkholderia pseudomallei 354e]
gi|385376252|gb|EIF80951.1| CBS domain-containing protein [Burkholderia pseudomallei 354a]
gi|385659126|gb|AFI66549.1| CBS domain-containing protein [Burkholderia pseudomallei 1026b]
gi|403074053|gb|AFR15633.1| CBS domain-containing protein [Burkholderia pseudomallei BPC006]
Length = 154
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + AV +M +H++G+LVV++ G+ + GI+T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTPLRSAVDTMAEHDIGSLVVMEYGD---LVGILTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
+ ++ G S V +M E +T +P+T + ++M
Sbjct: 56 ILRLKANGGSIGEVLVRTVMDEP---LTCTPETDIDEVRRMM 94
>gi|386714143|ref|YP_006180466.1| hypothetical protein HBHAL_2844 [Halobacillus halophilus DSM 2266]
gi|384073699|emb|CCG45192.1| hypothetical protein HBHAL_2844 [Halobacillus halophilus DSM 2266]
Length = 142
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 11/92 (11%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---STK 130
C TDDT+ A + M Q NVGA+ V Q + G++T+RD ++++G + K +T
Sbjct: 15 CRTDDTLSSAAQIMKQKNVGAVPVCD--NQGQLMGMVTDRD----LVLRGYADKKPETTP 68
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
+ +M+ ++L SP+T + A ++M H +
Sbjct: 69 IQQVMS--DRLYNCSPETTLEEASKIMAEHQI 98
>gi|167836867|ref|ZP_02463750.1| CBS domain protein [Burkholderia thailandensis MSMB43]
gi|424904149|ref|ZP_18327659.1| hypothetical protein A33K_15550 [Burkholderia thailandensis MSMB43]
gi|390930127|gb|EIP87529.1| hypothetical protein A33K_15550 [Burkholderia thailandensis MSMB43]
Length = 154
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + AV +M +H++G+LVV++ G+ + GI+T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTPLRSAVDTMAEHDIGSLVVMEYGD---LVGILTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
+ ++ G S V +M E +T +P+T + ++M
Sbjct: 56 ILRLKANGGSIGDVLVRTVMDEP---LTCTPETDIDEVRRMM 94
>gi|56418544|ref|YP_145862.1| inosine 5'-monophosphate dehydrogenase [Geobacillus kaustophilus
HTA426]
gi|261417509|ref|YP_003251191.1| inosine 5'-monophosphate dehydrogenase [Geobacillus sp. Y412MC61]
gi|297528385|ref|YP_003669660.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. C56-T3]
gi|319765167|ref|YP_004130668.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. Y412MC52]
gi|375006813|ref|YP_004980441.1| inosine-5'-monophosphate dehydrogenase [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|448236319|ref|YP_007400377.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. GHH01]
gi|56378386|dbj|BAD74294.1| inositol-monophosphate dehydrogenase [Geobacillus kaustophilus
HTA426]
gi|261373966|gb|ACX76709.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. Y412MC61]
gi|297251637|gb|ADI25083.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. C56-T3]
gi|317110033|gb|ADU92525.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. Y412MC52]
gi|359285657|gb|AEV17341.1| Inosine-5'-monophosphate dehydrogenase [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|445205161|gb|AGE20626.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. GHH01]
Length = 488
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D +K +G + T D VYDA M+++ + + +V E++ + GIIT RD LR
Sbjct: 86 DKVKRSERGVITDPFFLTPDHQVYDAEHLMSKYRISGVPIVNNPEEQKLVGIITNRD-LR 144
Query: 118 KIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
I S K+ ++MT+EN LIT T + A +++ H
Sbjct: 145 FI-----QDYSIKISEVMTKEN-LITAPVGTTLEEAEKILQRH 181
>gi|381209782|ref|ZP_09916853.1| hypothetical protein LGrbi_07651 [Lentibacillus sp. Grbi]
Length = 142
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---STK 130
C +DT+Y+A M NVG + V E K + G+IT+RD ++++G + K +T
Sbjct: 15 CRKEDTLYEAAAKMRDRNVGVIPVC--SENKELMGVITDRD----LVLRGYAEKKPDTTT 68
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLM 157
V ++M++E L S DT V A +M
Sbjct: 69 VQEVMSDE--LYHASQDTSVQEAADMM 93
>gi|138893688|ref|YP_001124141.1| inosine 5'-monophosphate dehydrogenase [Geobacillus
thermodenitrificans NG80-2]
gi|196251176|ref|ZP_03149852.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. G11MC16]
gi|134265201|gb|ABO65396.1| Inosine-monophosphate dehydrogenase [Geobacillus
thermodenitrificans NG80-2]
gi|196209317|gb|EDY04100.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. G11MC16]
Length = 488
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D +K +G + T D VYDA M ++ + + +V E++ + GIIT RD LR
Sbjct: 86 DKVKRSERGVITDPFFLTPDHQVYDAEHLMGKYRISGVPIVNNAEEQKLVGIITNRD-LR 144
Query: 118 KIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
I S K+ ++MT+EN LIT T + A +++ H
Sbjct: 145 FI-----QDYSIKISEVMTKEN-LITAPVGTTLEEAEKILQQH 181
>gi|352682306|ref|YP_004892830.1| hypothetical protein TTX_1109 [Thermoproteus tenax Kra 1]
gi|350275105|emb|CCC81752.1| CBS domain [Thermoproteus tenax Kra 1]
Length = 136
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D T+ +AV + +HNVGALVVV+ E +++ERD +R + R + ST V M+
Sbjct: 17 DSTLLEAVDRLMEHNVGALVVVRREEPDKAVAVLSERDIVRAL--NMRMALSTPVEAFMS 74
Query: 137 EENKLITVSPDTKVLRAMQLM 157
+I++ D + +A +LM
Sbjct: 75 P--GVISIEYDQPLSKAAELM 93
>gi|346993348|ref|ZP_08861420.1| CBS domain-containing protein [Ruegeria sp. TW15]
Length = 174
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+S +L+ KG +DT++ V + + +GA+VV + S+ GI++ER
Sbjct: 33 TTVSKLLEGKGDAV----FSVRPNDTIHSVVDILREKRIGAVVVTD--QNGSLQGILSER 86
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
D +R++ + V D+MT E K T SPD + ++ MT
Sbjct: 87 DIVRRMAETPGQTLPQSVADLMTTEVK--TCSPDDYLNDVLKTMT 129
>gi|288931695|ref|YP_003435755.1| signal transduction protein with CBS domains [Ferroglobus placidus
DSM 10642]
gi|288893943|gb|ADC65480.1| putative signal transduction protein with CBS domains [Ferroglobus
placidus DSM 10642]
Length = 175
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D++V A + M + VG++VVV+ G GI+TE D +RK++ + + K+ +IMT
Sbjct: 21 DESVLKASRRMIEFGVGSIVVVENGRP---VGIVTESDIIRKVVARNKVPSEVKLEEIMT 77
Query: 137 EENKLITVSPDTKVLRAMQLM 157
+IT+ P + A +M
Sbjct: 78 --YPIITIKPTASIREAANIM 96
>gi|407462371|ref|YP_006773688.1| signal transduction protein [Candidatus Nitrosopumilus koreensis
AR1]
gi|407045993|gb|AFS80746.1| signal transduction protein [Candidatus Nitrosopumilus koreensis
AR1]
Length = 140
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVYDA + + + LV+++ G+ G+++ERD ++KI + + S + DIM++
Sbjct: 20 TVYDAATILKEKEISFLVIIQDGKP---VGVVSERDIVQKIAAEDLKASSVLIEDIMSK- 75
Query: 139 NKLITVSPDTKVLRAMQLMTGH 160
K VSPDT + A+Q M +
Sbjct: 76 -KFRWVSPDTVIEDAVQKMLNN 96
>gi|381166724|ref|ZP_09875938.1| CBS domain [Phaeospirillum molischianum DSM 120]
gi|380684297|emb|CCG40750.1| CBS domain [Phaeospirillum molischianum DSM 120]
Length = 131
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 8/105 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL AK KGA G + D V +A + + +H +GA+ V++ G + GI++ERD
Sbjct: 2 TVRAILAAKPKGA-GELVSIAPDALVVEAAQLLARHRIGAVPVIEAG---ILVGILSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRA-MQLMT 158
+R + + +T+V +MT E + V+ + L A ++LM+
Sbjct: 58 IVRALARSASTLGTTRVRGLMTAE---VFVARENDALEAVLELMS 99
>gi|90417798|ref|ZP_01225710.1| putative CBS domain protein [Aurantimonas manganoxydans SI85-9A1]
gi|90337470|gb|EAS51121.1| putative CBS domain protein [Aurantimonas manganoxydans SI85-9A1]
Length = 143
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 58/103 (56%), Gaps = 8/103 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ IL+AKG+ + + T+ + ++ + +GA+V+ E VAGI++ERD
Sbjct: 3 VRHILEAKGR----DVVTLKPEATLEETMQVLANRRIGAIVLTN--ENGGVAGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R + G + S VG++MT +++ T + T V +AM++MT
Sbjct: 57 VRVLGTAGVGAISQSVGEVMT--SQVSTCTEATTVNQAMEMMT 97
>gi|402847981|ref|ZP_10896249.1| Inosine-5'-monophosphate dehydrogenase [Rhodovulum sp. PH10]
gi|402501776|gb|EJW13420.1| Inosine-5'-monophosphate dehydrogenase [Rhodovulum sp. PH10]
Length = 144
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
++D+LK K G + DTV + + + Q VG ++V + G +SV GI++ERD
Sbjct: 3 VADLLKGKSPGV----MTVQPTDTVAELAERLRQARVGVMIVSRDG--RSVDGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ G + +V D+MT+ +IT SP V ++MT
Sbjct: 57 AYGLAEHGETLPVLQVSDVMTK--AVITCSPQDSVAEVSKVMT 97
>gi|296532694|ref|ZP_06895384.1| CBS domain protein [Roseomonas cervicalis ATCC 49957]
gi|296266977|gb|EFH12912.1| CBS domain protein [Roseomonas cervicalis ATCC 49957]
Length = 145
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI+ IL+ KG G + D +++ QH +GA++V G +V GI++ERD
Sbjct: 2 TIARILQGKG----GQVVSVAPLDDAAAIARTLAQHRIGAVLVRDAG--GAVLGIVSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
R + ++ + +MT L T++P T + A+ LMT
Sbjct: 56 IARALAAHEEATARLRAEQLMT--RVLHTITPATSIADALALMT 97
>gi|407473531|ref|YP_006787931.1| cystathionine beta-synthase domain-containing protein [Clostridium
acidurici 9a]
gi|407050039|gb|AFS78084.1| cystathionine beta-synthase domain-containing protein [Clostridium
acidurici 9a]
Length = 144
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKL 141
DA + M + +VG + V+ +++V G++T+RD + + I +G+S S+ V DIM+
Sbjct: 22 DAAREMKELDVGVIPVMCSKTKQNV-GLLTDRDIIVRAISEGKS-LSSSVKDIMSANP-- 77
Query: 142 ITVSPDTKVLRAMQLMTGHML 162
ITVSPDT+V A +LM+ + +
Sbjct: 78 ITVSPDTEVSEAAKLMSQNQI 98
>gi|335423773|ref|ZP_08552793.1| isocitrate dehydrogenase, NADP-dependent [Salinisphaera shabanensis
E1L3A]
gi|334891236|gb|EGM29491.1| isocitrate dehydrogenase, NADP-dependent [Salinisphaera shabanensis
E1L3A]
Length = 589
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 27/131 (20%)
Query: 24 RLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDT-VYD 82
RL+ PM + S R T++SD++ L TDDT V+D
Sbjct: 442 RLLQPMEEMIASGR--------------TPTSVSDVMTRT--------LITVTDDTSVHD 479
Query: 83 AVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLI 142
A+ M ++ V +LVV +P + GI+T RD + KI+ +G+S VG+I + ++
Sbjct: 480 AMHEMRKNEVSSLVV-EPNDSGE-WGIMTRRDIVTKIVREGKSPTDITVGEIAS--RPVV 535
Query: 143 TVSPDTKVLRA 153
TV+P+T + A
Sbjct: 536 TVAPETHLREA 546
>gi|187777213|ref|ZP_02993686.1| hypothetical protein CLOSPO_00759 [Clostridium sporogenes ATCC
15579]
gi|187774141|gb|EDU37943.1| CBS domain protein [Clostridium sporogenes ATCC 15579]
Length = 144
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+D+V A + M++HNVG++ + E V G+IT+RD + + G S + KVGDIMT
Sbjct: 23 NDSVEKAARLMSEHNVGSIPIC---ENNKVVGVITDRDIALRSVANG-SDNNIKVGDIMT 78
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
+ + D + A ++M+
Sbjct: 79 S--NPVVANKDMDIHDAARIMS 98
>gi|325963518|ref|YP_004241424.1| hypothetical protein Asphe3_21370 [Arthrobacter phenanthrenivorans
Sphe3]
gi|323469605|gb|ADX73290.1| CBS domain-containing protein [Arthrobacter phenanthrenivorans
Sphe3]
Length = 138
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
++T+ A + M NVGAL + GE + G+IT+RD + K +G ++ K GD
Sbjct: 18 NETLEAAARKMKDLNVGALPIC--GEDNRLKGMITDRDIVIKCFAEGGDPRTAKAGDFG- 74
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML 162
+ K +T+ D + A++ M H +
Sbjct: 75 -QGKPVTIGADDSIEEAIRTMEEHQV 99
>gi|260566223|ref|ZP_05836693.1| CBS domain-containing protein [Brucella suis bv. 4 str. 40]
gi|261755217|ref|ZP_05998926.1| CBS domain-containing protein [Brucella suis bv. 3 str. 686]
gi|376276134|ref|YP_005116573.1| hypothetical protein BCA52141_I3178 [Brucella canis HSK A52141]
gi|260155741|gb|EEW90821.1| CBS domain-containing protein [Brucella suis bv. 4 str. 40]
gi|261744970|gb|EEY32896.1| CBS domain-containing protein [Brucella suis bv. 3 str. 686]
gi|363404701|gb|AEW14996.1| CBS domain-containing protein [Brucella canis HSK A52141]
Length = 121
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG+ + + DT+ AV + +H +GALVV E + GI++ERD
Sbjct: 2 TVRSILETKGRDV----VVIASADTLSQAVAMLNKHKIGALVVC--DEAGHIEGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R + Q + S V ++MT +K+ + + M++MT
Sbjct: 56 VVRALAAQESQAMSKSVAEVMT--SKVQVCHEHHTINQVMKIMT 97
>gi|386001073|ref|YP_005919372.1| Putative signal-transduction protein with CBS domains [Methanosaeta
harundinacea 6Ac]
gi|357209129|gb|AET63749.1| Putative signal-transduction protein with CBS domains [Methanosaeta
harundinacea 6Ac]
Length = 172
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 76 TDDTVYDAVKS---MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
T D+ D VK+ M NVG+L+V+ + GIITERD + KI+ + + + KV
Sbjct: 3 TIDSKVDVVKAANKMFSANVGSLIVIHDDQP---MGIITERDLVGKIVARAANPREVKVR 59
Query: 133 DIMTEENKLITVSPDTKVLRA 153
D+M+ + LITV PD + A
Sbjct: 60 DVMS--SPLITVHPDVSLSEA 78
>gi|440232680|ref|YP_007346473.1| KpsF/GutQ family protein [Serratia marcescens FGI94]
gi|440054385|gb|AGB84288.1| KpsF/GutQ family protein [Serratia marcescens FGI94]
Length = 328
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+ D T+ DA+ +T+ N+G V+ EQ +AGI T+ D LR+I G S K+ D+
Sbjct: 220 SADATLRDALLEITRKNLGMTVICD--EQMHIAGIFTDGD-LRRIFDLGIDLNSAKIADV 276
Query: 135 MTEENKLITVSPDTKVLRAMQLM 157
MT + V P T + A+ LM
Sbjct: 277 MTRGG--VRVRPHTLAVDALNLM 297
>gi|62290164|ref|YP_221957.1| hypothetical protein BruAb1_1258 [Brucella abortus bv. 1 str.
9-941]
gi|82700086|ref|YP_414660.1| hypothetical protein BAB1_1274 [Brucella melitensis biovar Abortus
2308]
gi|148559815|ref|YP_001259171.1| CBS domain-containing protein [Brucella ovis ATCC 25840]
gi|189024399|ref|YP_001935167.1| hypothetical protein BAbS19_I11880 [Brucella abortus S19]
gi|256263764|ref|ZP_05466296.1| CBS domain-containing protein [Brucella melitensis bv. 2 str. 63/9]
gi|260546708|ref|ZP_05822447.1| CBS domain-containing protein [Brucella abortus NCTC 8038]
gi|260754992|ref|ZP_05867340.1| CBS domain-containing protein [Brucella abortus bv. 6 str. 870]
gi|260758208|ref|ZP_05870556.1| CBS domain-containing protein [Brucella abortus bv. 4 str. 292]
gi|260762035|ref|ZP_05874378.1| CBS domain-containing protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260884002|ref|ZP_05895616.1| CBS domain-containing protein [Brucella abortus bv. 9 str. C68]
gi|261214246|ref|ZP_05928527.1| CBS domain-containing protein [Brucella abortus bv. 3 str. Tulya]
gi|261219598|ref|ZP_05933879.1| CBS domain-containing protein [Brucella ceti M13/05/1]
gi|261222410|ref|ZP_05936691.1| CBS domain-containing protein [Brucella ceti B1/94]
gi|261314029|ref|ZP_05953226.1| CBS domain-containing protein [Brucella pinnipedialis M163/99/10]
gi|261317884|ref|ZP_05957081.1| CBS domain-containing protein [Brucella pinnipedialis B2/94]
gi|261322093|ref|ZP_05961290.1| CBS domain-containing protein [Brucella ceti M644/93/1]
gi|261325335|ref|ZP_05964532.1| CBS domain-containing protein [Brucella neotomae 5K33]
gi|261752559|ref|ZP_05996268.1| CBS domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261758440|ref|ZP_06002149.1| CBS domain-containing protein [Brucella sp. F5/99]
gi|265984308|ref|ZP_06097043.1| CBS domain-containing protein [Brucella sp. 83/13]
gi|265988912|ref|ZP_06101469.1| CBS domain-containing protein [Brucella pinnipedialis M292/94/1]
gi|265995163|ref|ZP_06107720.1| CBS domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|265998377|ref|ZP_06110934.1| CBS domain-containing protein [Brucella ceti M490/95/1]
gi|294852589|ref|ZP_06793262.1| inosine-5'-monophosphate dehydrogenase [Brucella sp. NVSL 07-0026]
gi|306839078|ref|ZP_07471895.1| CBS domain-containing protein [Brucella sp. NF 2653]
gi|306840280|ref|ZP_07473054.1| CBS domain-containing protein [Brucella sp. BO2]
gi|306844158|ref|ZP_07476751.1| CBS domain-containing protein [Brucella inopinata BO1]
gi|376273017|ref|YP_005151595.1| hypothetical protein BAA13334_I01978 [Brucella abortus A13334]
gi|384211622|ref|YP_005600704.1| hypothetical protein [Brucella melitensis M5-90]
gi|384408728|ref|YP_005597349.1| CBS domain protein [Brucella melitensis M28]
gi|384445304|ref|YP_005604023.1| hypothetical protein [Brucella melitensis NI]
gi|423166654|ref|ZP_17153357.1| hypothetical protein M17_00344 [Brucella abortus bv. 1 str. NI435a]
gi|423170972|ref|ZP_17157647.1| hypothetical protein M19_01505 [Brucella abortus bv. 1 str. NI474]
gi|423172946|ref|ZP_17159617.1| hypothetical protein M1A_00344 [Brucella abortus bv. 1 str. NI486]
gi|423178361|ref|ZP_17165005.1| hypothetical protein M1E_02601 [Brucella abortus bv. 1 str. NI488]
gi|423180402|ref|ZP_17167043.1| hypothetical protein M1G_01502 [Brucella abortus bv. 1 str. NI010]
gi|423183534|ref|ZP_17170171.1| hypothetical protein M1I_01503 [Brucella abortus bv. 1 str. NI016]
gi|423185526|ref|ZP_17172140.1| hypothetical protein M1K_00344 [Brucella abortus bv. 1 str. NI021]
gi|423188661|ref|ZP_17175271.1| hypothetical protein M1M_00343 [Brucella abortus bv. 1 str. NI259]
gi|62196296|gb|AAX74596.1| CBS domain protein [Brucella abortus bv. 1 str. 9-941]
gi|82616187|emb|CAJ11230.1| CBS domain [Brucella melitensis biovar Abortus 2308]
gi|148371072|gb|ABQ61051.1| CBS domain protein [Brucella ovis ATCC 25840]
gi|189019971|gb|ACD72693.1| CBS domain protein [Brucella abortus S19]
gi|260095758|gb|EEW79635.1| CBS domain-containing protein [Brucella abortus NCTC 8038]
gi|260668526|gb|EEX55466.1| CBS domain-containing protein [Brucella abortus bv. 4 str. 292]
gi|260672467|gb|EEX59288.1| CBS domain-containing protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260675100|gb|EEX61921.1| CBS domain-containing protein [Brucella abortus bv. 6 str. 870]
gi|260873530|gb|EEX80599.1| CBS domain-containing protein [Brucella abortus bv. 9 str. C68]
gi|260915853|gb|EEX82714.1| CBS domain-containing protein [Brucella abortus bv. 3 str. Tulya]
gi|260920994|gb|EEX87647.1| CBS domain-containing protein [Brucella ceti B1/94]
gi|260924687|gb|EEX91255.1| CBS domain-containing protein [Brucella ceti M13/05/1]
gi|261294783|gb|EEX98279.1| CBS domain-containing protein [Brucella ceti M644/93/1]
gi|261297107|gb|EEY00604.1| CBS domain-containing protein [Brucella pinnipedialis B2/94]
gi|261301315|gb|EEY04812.1| CBS domain-containing protein [Brucella neotomae 5K33]
gi|261303055|gb|EEY06552.1| CBS domain-containing protein [Brucella pinnipedialis M163/99/10]
gi|261738424|gb|EEY26420.1| CBS domain-containing protein [Brucella sp. F5/99]
gi|261742312|gb|EEY30238.1| CBS domain-containing protein [Brucella suis bv. 5 str. 513]
gi|262552845|gb|EEZ08835.1| CBS domain-containing protein [Brucella ceti M490/95/1]
gi|262766276|gb|EEZ12065.1| CBS domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|263093864|gb|EEZ17826.1| CBS domain-containing protein [Brucella melitensis bv. 2 str. 63/9]
gi|264661109|gb|EEZ31370.1| CBS domain-containing protein [Brucella pinnipedialis M292/94/1]
gi|264662900|gb|EEZ33161.1| CBS domain-containing protein [Brucella sp. 83/13]
gi|294821178|gb|EFG38177.1| inosine-5'-monophosphate dehydrogenase [Brucella sp. NVSL 07-0026]
gi|306275433|gb|EFM57170.1| CBS domain-containing protein [Brucella inopinata BO1]
gi|306289807|gb|EFM60989.1| CBS domain-containing protein [Brucella sp. BO2]
gi|306405625|gb|EFM61887.1| CBS domain-containing protein [Brucella sp. NF 2653]
gi|326409275|gb|ADZ66340.1| CBS domain protein [Brucella melitensis M28]
gi|326538985|gb|ADZ87200.1| CBS domain containing protein [Brucella melitensis M5-90]
gi|349743295|gb|AEQ08838.1| CBS domain protein [Brucella melitensis NI]
gi|363400623|gb|AEW17593.1| CBS domain containing protein [Brucella abortus A13334]
gi|374538306|gb|EHR09814.1| hypothetical protein M19_01505 [Brucella abortus bv. 1 str. NI474]
gi|374544138|gb|EHR15616.1| hypothetical protein M17_00344 [Brucella abortus bv. 1 str. NI435a]
gi|374544465|gb|EHR15942.1| hypothetical protein M1A_00344 [Brucella abortus bv. 1 str. NI486]
gi|374545142|gb|EHR16605.1| hypothetical protein M1E_02601 [Brucella abortus bv. 1 str. NI488]
gi|374547933|gb|EHR19385.1| hypothetical protein M1G_01502 [Brucella abortus bv. 1 str. NI010]
gi|374548362|gb|EHR19810.1| hypothetical protein M1I_01503 [Brucella abortus bv. 1 str. NI016]
gi|374559223|gb|EHR30612.1| hypothetical protein M1M_00343 [Brucella abortus bv. 1 str. NI259]
gi|374560236|gb|EHR31619.1| hypothetical protein M1K_00344 [Brucella abortus bv. 1 str. NI021]
Length = 143
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG+ + + DT+ AV + +H +GALVV E + GI++ERD
Sbjct: 2 TVRSILETKGR----DVVVIASADTLSQAVAMLNKHKIGALVVCD--EAGHIEGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R + Q + S V ++MT +K+ + + M++MT
Sbjct: 56 VVRALAAQESQAMSKSVAEVMT--SKVQVCHEHHTINQVMKIMT 97
>gi|149182262|ref|ZP_01860742.1| hypothetical protein BSG1_19894 [Bacillus sp. SG-1]
gi|148850031|gb|EDL64201.1| hypothetical protein BSG1_19894 [Bacillus sp. SG-1]
Length = 133
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 13/95 (13%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK--V 131
C+ D A M+ VGAL VV+ G+ V G++T+RD ++V+G S + +
Sbjct: 8 CSAQDNFQSAASKMSSLGVGALPVVQNGQ---VVGMVTDRD----LVVRGLSHNNAAGTI 60
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML--LP 164
+M+ N ++TVSP+ V A LM+ H + LP
Sbjct: 61 QGVMS--NHVVTVSPNASVEEAAALMSQHQVRRLP 93
>gi|116619880|ref|YP_822036.1| signal-transduction protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223042|gb|ABJ81751.1| putative signal-transduction protein with CBS domains [Candidatus
Solibacter usitatus Ellin6076]
Length = 147
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ C DTV + K M +VG+L V + + + GIIT+RD K++ R
Sbjct: 12 VCCIPTDTVSNVAKRMKTEDVGSLPVCESRTSRKLVGIITDRDLAIKVVADSRDPNKVTT 71
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLM 157
GD+MT +T PD + A+ M
Sbjct: 72 GDVMTWNP--MTCHPDDDLDIAVHSM 95
>gi|188997444|ref|YP_001931695.1| signal-transduction protein with CBS domains [Sulfurihydrogenibium
sp. YO3AOP1]
gi|188932511|gb|ACD67141.1| putative signal-transduction protein with CBS domains
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 600
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVV-VKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ D T+YDAVK MT+ +++V GE GIIT+ D +KII+Q S+ S V
Sbjct: 153 SKDTTIYDAVKEMTEKGAYSVIVDFGNGEY----GIITDSDIRKKIILQNIST-SENVEK 207
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGH 160
I T+ LIT++ D+ + A+ LM H
Sbjct: 208 IATK--GLITINADSFLFDAIFLMIKH 232
>gi|163843518|ref|YP_001627922.1| hypothetical protein BSUIS_A1304 [Brucella suis ATCC 23445]
gi|225627721|ref|ZP_03785758.1| CBS domain-containing protein [Brucella ceti str. Cudo]
gi|225852750|ref|YP_002732983.1| hypothetical protein BMEA_A1301 [Brucella melitensis ATCC 23457]
gi|237815671|ref|ZP_04594668.1| CBS domain-containing protein [Brucella abortus str. 2308 A]
gi|256369677|ref|YP_003107187.1| hypothetical protein BMI_I1267 [Brucella microti CCM 4915]
gi|297248558|ref|ZP_06932276.1| CBS domain-containing protein [Brucella abortus bv. 5 str. B3196]
gi|340790871|ref|YP_004756336.1| CBS domain containing protein [Brucella pinnipedialis B2/94]
gi|163674241|gb|ABY38352.1| CBS domain containing protein [Brucella suis ATCC 23445]
gi|225617726|gb|EEH14771.1| CBS domain-containing protein [Brucella ceti str. Cudo]
gi|225641115|gb|ACO01029.1| CBS domain containing protein [Brucella melitensis ATCC 23457]
gi|237788969|gb|EEP63180.1| CBS domain-containing protein [Brucella abortus str. 2308 A]
gi|255999839|gb|ACU48238.1| CBS domain containing protein [Brucella microti CCM 4915]
gi|297175727|gb|EFH35074.1| CBS domain-containing protein [Brucella abortus bv. 5 str. B3196]
gi|340559330|gb|AEK54568.1| CBS domain containing protein [Brucella pinnipedialis B2/94]
Length = 157
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG+ + + DT+ AV + +H +GALVV E + GI++ERD
Sbjct: 16 TVRSILETKGRDV----VVIASADTLSQAVAMLNKHKIGALVVCD--EAGHIEGILSERD 69
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R + Q + S V ++MT +K+ + + M++MT
Sbjct: 70 VVRALAAQESQAMSKSVAEVMT--SKVQVCHEHHTINQVMKIMT 111
>gi|70605897|ref|YP_254767.1| hypothetical protein Saci_0044 [Sulfolobus acidocaldarius DSM 639]
gi|449066089|ref|YP_007433171.1| hypothetical protein SacN8_00210 [Sulfolobus acidocaldarius N8]
gi|68566545|gb|AAY79474.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639]
gi|449034597|gb|AGE70023.1| hypothetical protein SacN8_00210 [Sulfolobus acidocaldarius N8]
Length = 164
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DD+V A + M +HN+G+L+V+ + V+GIITERD +R I + ++ V + MT
Sbjct: 19 DDSVRFAAEEMKKHNIGSLIVID--NRGKVSGIITERDLVRAI---AEGNINSTVSNYMT 73
Query: 137 EENKLITVSPDTKVLRAMQLMTGH 160
+I V+ + +A+Q+M H
Sbjct: 74 R--NVIGVTENFDPNQALQVMLDH 95
>gi|408826341|ref|ZP_11211231.1| hypothetical protein SsomD4_04078 [Streptomyces somaliensis DSM
40738]
Length = 139
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
W +T+ A + M +HNVGAL + E+ + GI+T+RD + K + G+ G
Sbjct: 14 WIPAHETLDAAARLMREHNVGALPIADGDER--LCGIVTDRDIVVKCVAAGQDPSRVTCG 71
Query: 133 DIMTEENKLITVSPD-TKVLRAMQ 155
D+ + I D ++VLR M+
Sbjct: 72 DVAEGTPRWIDAGADVSEVLREMR 95
>gi|149201936|ref|ZP_01878910.1| CBS domain protein [Roseovarius sp. TM1035]
gi|149144984|gb|EDM33013.1| CBS domain protein [Roseovarius sp. TM1035]
Length = 144
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILK+KG D + + + V +A +++ + +G LVV + GE +V GII+ERD
Sbjct: 3 VQQILKSKG---DSAVITISPQTKVSEAAQTLAERRIGGLVVSRDGE--TVEGIISERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDT 148
+R + V+G + V ++MT N + DT
Sbjct: 58 VRSLAVRGVVCMTETVSEMMT-RNPVCCSRQDT 89
>gi|429219834|ref|YP_007181478.1| signal transduction protein [Deinococcus peraridilitoris DSM 19664]
gi|429130697|gb|AFZ67712.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Deinococcus peraridilitoris DSM 19664]
Length = 155
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ CT D + D M +++ G++ VV+ + G++T+RD + + G++
Sbjct: 12 VCCTPDTNLRDVAAMMVEYDCGSVPVVENYDNMRAVGVVTDRDITVRTVAAGKNPLECCA 71
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLM 157
D MT+ ++++SP+ ++ A++LM
Sbjct: 72 QDAMTD--TVVSISPEADLMDAIRLM 95
>gi|91773711|ref|YP_566403.1| CBS domain-containing protein [Methanococcoides burtonii DSM 6242]
gi|91712726|gb|ABE52653.1| Cystathionine beta-synthase domain-containing protein
[Methanococcoides burtonii DSM 6242]
Length = 200
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T + K+M + N+ ++++ K GE GIITERD + K++V+ + +IM+
Sbjct: 40 TTLEVAKAMDEQNIDSVIITKYGEA---TGIITERDMVCKVMVKDVIPHTVNAEEIMS-- 94
Query: 139 NKLITVSPDTKVLRAMQLM 157
+ ++TV P+T V++A ++M
Sbjct: 95 SPILTVKPNTGVIKASEMM 113
>gi|329942540|ref|ZP_08291350.1| sugar isomerase, KpsF/GutQ family protein [Chlamydophila psittaci
Cal10]
gi|332287172|ref|YP_004422073.1| carbohydrate isomerase [Chlamydophila psittaci 6BC]
gi|384450323|ref|YP_005662923.1| carbohydrate isomerase, KpsF/GutQ family [Chlamydophila psittaci
6BC]
gi|384451325|ref|YP_005663923.1| carbohydrate isomerase [Chlamydophila psittaci 01DC11]
gi|384452301|ref|YP_005664898.1| carbohydrate isomerase, KpsF/GutQ family [Chlamydophila psittaci
08DC60]
gi|384453275|ref|YP_005665871.1| carbohydrate isomerase [Chlamydophila psittaci C19/98]
gi|384454253|ref|YP_005666848.1| carbohydrate isomerase [Chlamydophila psittaci 02DC15]
gi|392376425|ref|YP_004064203.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
gi|407453715|ref|YP_006732823.1| sugar isomerase, KpsF/GutQ family protein [Chlamydia psittaci
84/55]
gi|313847768|emb|CBY16758.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
gi|325506892|gb|ADZ18530.1| carbohydrate isomerase [Chlamydophila psittaci 6BC]
gi|328815450|gb|EGF85438.1| sugar isomerase, KpsF/GutQ family protein [Chlamydophila psittaci
Cal10]
gi|328914417|gb|AEB55250.1| carbohydrate isomerase, KpsF/GutQ family [Chlamydophila psittaci
6BC]
gi|334692056|gb|AEG85275.1| carbohydrate isomerase [Chlamydophila psittaci C19/98]
gi|334693035|gb|AEG86253.1| carbohydrate isomerase [Chlamydophila psittaci 01DC11]
gi|334694010|gb|AEG87227.1| carbohydrate isomerase [Chlamydophila psittaci 02DC15]
gi|334694990|gb|AEG88206.1| carbohydrate isomerase, KpsF/GutQ family [Chlamydophila psittaci
08DC60]
gi|405780474|gb|AFS19224.1| sugar isomerase, KpsF/GutQ family protein [Chlamydia psittaci
84/55]
Length = 329
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+C+ +DT+ D++ + + G + +V E+ + GI T+ D R + G S ++
Sbjct: 214 FCSPEDTIADSLDIFSSYGCGCVCIVN--EKFEILGIFTDGDLRRSLTRHGGDILSQRLK 271
Query: 133 DIMTEENKLITVSPDTKVLRAMQLM 157
D+MT ++I S D VL +Q+M
Sbjct: 272 DVMTPNPRVI--SEDADVLLGLQMM 294
>gi|406592043|ref|YP_006739223.1| sugar isomerase, KpsF/GutQ family protein [Chlamydia psittaci CP3]
gi|406594337|ref|YP_006741374.1| sugar isomerase, KpsF/GutQ family protein [Chlamydia psittaci MN]
gi|410858202|ref|YP_006974142.1| conserved hypothetical protein [Chlamydia psittaci 01DC12]
gi|405782769|gb|AFS21517.1| sugar isomerase, KpsF/GutQ family protein [Chlamydia psittaci MN]
gi|405787915|gb|AFS26658.1| sugar isomerase, KpsF/GutQ family protein [Chlamydia psittaci CP3]
gi|410811097|emb|CCO01740.1| conserved hypothetical protein [Chlamydia psittaci 01DC12]
Length = 329
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+C+ +DT+ D++ + + G + +V E+ + GI T+ D R + G S ++
Sbjct: 214 FCSPEDTIADSLDIFSSYGCGCVCIVN--EKFEILGIFTDGDLRRSLTRHGGDILSQRLT 271
Query: 133 DIMTEENKLITVSPDTKVLRAMQLM 157
D+MT ++I S D VL +Q+M
Sbjct: 272 DVMTPNPRVI--SEDADVLLGLQMM 294
>gi|186471767|ref|YP_001863085.1| signal-transduction protein [Burkholderia phymatum STM815]
gi|184198076|gb|ACC76039.1| putative signal-transduction protein with CBS domains [Burkholderia
phymatum STM815]
Length = 154
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
++ +A M +VGALVV + + G+IT+RD + + + G S + +VGD+M+
Sbjct: 19 SLQEAAVQMRDQHVGALVVSEGNGSGRILGVITDRDIVLQSVCTGSSPITVRVGDVMSPH 78
Query: 139 NKLITVSPDTKVLRAMQLMTGH 160
++++ + + AMQ M H
Sbjct: 79 --ILSIDVNADITEAMQTMASH 98
>gi|407460395|ref|YP_006738170.1| sugar isomerase, KpsF/GutQ family protein [Chlamydia psittaci WC]
gi|449070872|ref|YP_007437952.1| hypothetical protein AO9_01175 [Chlamydophila psittaci Mat116]
gi|405786736|gb|AFS25480.1| sugar isomerase, KpsF/GutQ family protein [Chlamydia psittaci WC]
gi|449039380|gb|AGE74804.1| hypothetical protein AO9_01175 [Chlamydophila psittaci Mat116]
Length = 329
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+C+ +DT+ D++ + + G + +V E+ + GI T+ D R + G S ++
Sbjct: 214 FCSPEDTIADSLDIFSSYGCGCVCIVN--EKFEILGIFTDGDLRRSLTRHGGDILSQRLK 271
Query: 133 DIMTEENKLITVSPDTKVLRAMQLM 157
D+MT ++I S D VL +Q+M
Sbjct: 272 DVMTPNPRVI--SEDADVLLGLQMM 294
>gi|294010055|ref|YP_003543515.1| hypothetical protein SJA_C1-00690 [Sphingobium japonicum UT26S]
gi|390169622|ref|ZP_10221555.1| hypothetical protein SIDU_19051 [Sphingobium indicum B90A]
gi|292673385|dbj|BAI94903.1| CBS domain protein [Sphingobium japonicum UT26S]
gi|389587626|gb|EIM65688.1| hypothetical protein SIDU_19051 [Sphingobium indicum B90A]
Length = 142
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI+ IL+ KG+ + + DTV V+ + Q +G + VV GE V GI +ERD
Sbjct: 2 TIAAILQRKGQ----DVVQVQSSDTVLSVVRLLAQRRIGCVPVVDDGE---VVGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
++ +G + VG+IMT IT T V + LMT
Sbjct: 55 LAYRVAQEGAAVLDRPVGEIMTAPA--ITTDDRTPVNHCLSLMT 96
>gi|407455046|ref|YP_006733937.1| sugar isomerase, KpsF/GutQ family protein [Chlamydia psittaci GR9]
gi|407457779|ref|YP_006736084.1| sugar isomerase, KpsF/GutQ family protein [Chlamydia psittaci
WS/RT/E30]
gi|405781589|gb|AFS20338.1| sugar isomerase, KpsF/GutQ family protein [Chlamydia psittaci GR9]
gi|405785234|gb|AFS23980.1| sugar isomerase, KpsF/GutQ family protein [Chlamydia psittaci
WS/RT/E30]
Length = 329
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+C+ +DT+ D++ + + G + +V E+ + GI T+ D R + G S ++
Sbjct: 214 FCSPEDTIADSLDIFSSYGCGCVCIVN--EKFEILGIFTDGDLRRSLTRHGGDILSQRLK 271
Query: 133 DIMTEENKLITVSPDTKVLRAMQLM 157
D+MT ++I S D VL +Q+M
Sbjct: 272 DVMTPNPRVI--SEDADVLLGLQMM 294
>gi|424824909|ref|ZP_18249896.1| hypothetical protein CAB1_0229 [Chlamydophila abortus LLG]
gi|333410008|gb|EGK68995.1| hypothetical protein CAB1_0229 [Chlamydophila abortus LLG]
Length = 329
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+C+ +DT+ D++ + + G + +V E+ + GI T+ D R + G S ++
Sbjct: 214 FCSPEDTIADSLDIFSSYGCGCVCIVN--EKFEILGIFTDGDLRRALARHGGDILSQRLQ 271
Query: 133 DIMTEENKLITVSPDTKVLRAMQLM 157
D+MT ++I S D VL +Q+M
Sbjct: 272 DVMTPNPRVI--SEDADVLLGLQMM 294
>gi|126460002|ref|YP_001056280.1| signal-transduction protein [Pyrobaculum calidifontis JCM 11548]
gi|126249723|gb|ABO08814.1| putative signal-transduction protein with CBS domains [Pyrobaculum
calidifontis JCM 11548]
Length = 135
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T+ +A +++T H VGA+VVV P GI++ERD ++ I + ST V M+ +
Sbjct: 26 TLLEAAEALTSHGVGAVVVVDPSSPDKPIGILSERDIVKAI--SAKMPLSTPVEAFMSTD 83
Query: 139 NKLITVSPDTKVLRAMQLM 157
L+TV + + RA LM
Sbjct: 84 --LVTVEAEEPLSRAADLM 100
>gi|449068365|ref|YP_007435446.1| hypothetical protein SacRon12I_00210 [Sulfolobus acidocaldarius
Ron12/I]
gi|449036873|gb|AGE72298.1| hypothetical protein SacRon12I_00210 [Sulfolobus acidocaldarius
Ron12/I]
Length = 150
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DD+V A + M +HN+G+L+V+ + V+GIITERD +R I + ++ V + MT
Sbjct: 5 DDSVRFAAEEMKKHNIGSLIVID--NRGKVSGIITERDLVRAI---AEGNINSTVSNYMT 59
Query: 137 EENKLITVSPDTKVLRAMQLMTGH 160
+I V+ + +A+Q+M H
Sbjct: 60 R--NVIGVTENFDPNQALQVMLDH 81
>gi|408828402|ref|ZP_11213292.1| signal-transduction protein with CBS domain [Streptomyces
somaliensis DSM 40738]
Length = 131
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D+TV +A K MT+ VGAL + G + G++T+RD + K++ +G+ K G++
Sbjct: 11 DETVLEAAKKMTELGVGALPIC--GTDNRLKGMLTDRDIVVKVLGKGKDPAECKAGELA- 67
Query: 137 EENKLITVSPDTKVLRAMQLMTGH 160
+ + +T+ D ++ MT H
Sbjct: 68 -QGEAVTIGADDDADEILRTMTEH 90
>gi|359688647|ref|ZP_09258648.1| signal transduction protein [Leptospira licerasiae serovar Varillal
str. MMD0835]
gi|418749444|ref|ZP_13305734.1| CBS domain protein [Leptospira licerasiae str. MMD4847]
gi|418755846|ref|ZP_13312036.1| CBS domain protein [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384117171|gb|EIE03426.1| CBS domain protein [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404274915|gb|EJZ42231.1| CBS domain protein [Leptospira licerasiae str. MMD4847]
Length = 146
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 9/102 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ DIL+ K D L TV++A++ MT++++G+++V+K G+ +AGI TERD
Sbjct: 3 VKDILEKK----DRKILSVEPSTTVWEAIRFMTKYDIGSVIVLKEGK---LAGIFTERDL 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
L + V D+M+ L T+ P+ +V + +M
Sbjct: 56 LHFASTDREAVFDKTVADLMS--TTLTTMQPNDQVDEVLTIM 95
>gi|347523925|ref|YP_004781495.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
gi|343460807|gb|AEM39243.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
Length = 143
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D ++ +A + M ++ +G+++VV E+ + GI+TERD L +V+G+ + V DIMT
Sbjct: 26 DVSIEEAARKMYENRIGSVLVVD--EEGKLVGIVTERDILYA-VVKGKVGRGLPVWDIMT 82
Query: 137 EENKLITVSPDTKVLRAMQLM 157
+ IT PD ++ A++ M
Sbjct: 83 --DNPITAKPDEPLIEAIERM 101
>gi|433648777|ref|YP_007293779.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium smegmatis JS623]
gi|433298554|gb|AGB24374.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium smegmatis JS623]
Length = 143
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + T + +V + +T HN+GA+VV+ Q + GI++ERD
Sbjct: 3 IADVLRNKG----AAVATITPETSVAGLLTELTVHNIGAMVVMS---QDGLVGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+RK+ G V +IMT + T SP+ V LMT
Sbjct: 56 VRKLHELGTEILHRPVSEIMT--TVVATCSPEDSVDSLSALMT 96
>gi|89901569|ref|YP_524040.1| signal-transduction protein [Rhodoferax ferrireducens T118]
gi|89346306|gb|ABD70509.1| putative signal-transduction protein with CBS domains [Rhodoferax
ferrireducens T118]
Length = 146
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+V+DA MT+ N G+++V+ + GI+TERD + +++ + + ++T D+MT
Sbjct: 23 SVWDAACIMTKANCGSILVIDAA--GVLQGILTERDLMTRVLAKALNPQTTLASDVMTRN 80
Query: 139 NKLITVSPDTKVLRAMQLM 157
+ +V PD +V A+ +M
Sbjct: 81 PQ--SVGPDMRVADAVVIM 97
>gi|423093305|ref|ZP_17081101.1| cyclic nucleotide-binding domain/CBS domain pair/putative
nucleotidyltransferase domain protein [Pseudomonas
fluorescens Q2-87]
gi|397882646|gb|EJK99133.1| cyclic nucleotide-binding domain/CBS domain pair/putative
nucleotidyltransferase domain protein [Pseudomonas
fluorescens Q2-87]
Length = 644
Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C+ + + +AVK M + VG++VVV EQK+ GI T RD LR+++ G S + +
Sbjct: 190 CSPETPLREAVKLMHEQQVGSIVVVN--EQKAPVGIFTLRD-LRQVVADGSGDFSQAIAE 246
Query: 134 IMTEENKLITVSPDTKVLRAMQLMT 158
MT+ + SPD A MT
Sbjct: 247 HMTQAPFFL--SPDHSAFDAAIAMT 269
>gi|399523073|ref|ZP_10763733.1| Signal transduction protein [Pseudomonas pseudoalcaligenes CECT
5344]
gi|399109101|emb|CCH40294.1| Signal transduction protein [Pseudomonas pseudoalcaligenes CECT
5344]
Length = 639
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 22/132 (16%)
Query: 41 VSSARMEEHGFESTTISDILKAK-GKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVK 99
+ SA + HG S+++K K K S + D + + MT+H+V +++VV
Sbjct: 134 LKSALEDSHG----KASELMKVKVRKLISRSAISVPLDTPIQQVAQVMTEHSVSSVIVVD 189
Query: 100 PG------------EQKS--VAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVS 145
PG EQ+S +AGI+T+RD +++ G S T V IMT IT+
Sbjct: 190 PGTRWPDPNQVDVAEQQSQVMAGILTDRDLRTRVVAAGLPS-DTPVSQIMTPNP--ITLQ 246
Query: 146 PDTKVLRAMQLM 157
D V AM M
Sbjct: 247 ADDSVFEAMLCM 258
>gi|257055170|ref|YP_003133002.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora viridis DSM 43017]
gi|256585042|gb|ACU96175.1| predicted signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora viridis DSM 43017]
Length = 131
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 76 TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
T +TV A + M VGAL + GE + G++T+RD + K++ +G+ + G++
Sbjct: 10 TSETVSRAARRMASEGVGALPI--KGEDHKLKGMLTDRDIVVKVLAEGKDPVALHAGELA 67
Query: 136 TEENKLITVSPDTKVLRAMQLMTGHML 162
+ +++V PD V A++ M H L
Sbjct: 68 --QGDVVSVGPDEDVSVALEKMARHQL 92
>gi|358637076|dbj|BAL24373.1| putative inosine-5'-monophosphate dehydrogenase related protein
[Azoarcus sp. KH32C]
Length = 143
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I DI+K D + L T D +V +A + M VGA+++ G + +AGI TERD
Sbjct: 5 IRDIVK------DQAILTATADLSVREATRRMADAKVGAIMITAKGGK--LAGIFTERDA 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
L K++ G T + +MT + T + D + A+ +M
Sbjct: 57 LVKVLANGVDPDKTTLAQVMTSDPT--TANADKNLGYALHMM 96
>gi|375082622|ref|ZP_09729675.1| inosine-5'-monophosphate dehydrogenase [Thermococcus litoralis DSM
5473]
gi|374742700|gb|EHR79085.1| inosine-5'-monophosphate dehydrogenase [Thermococcus litoralis DSM
5473]
Length = 177
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
++TV K + ++ V + VV+ E + GI+T+RD L K++ +G+ K K+ +IMT
Sbjct: 21 NETVEKVAKILARNKVSSAVVMDKDE---IIGIVTDRDILNKVVAKGKDPKEVKISEIMT 77
Query: 137 EENKLITVSPDTKVLRAMQLM 157
++ IT+ D + A++LM
Sbjct: 78 KDP--ITIEYDYDIQDAIELM 96
>gi|146303554|ref|YP_001190870.1| signal-transduction protein [Metallosphaera sedula DSM 5348]
gi|145701804|gb|ABP94946.1| putative signal-transduction protein with CBS domains
[Metallosphaera sedula DSM 5348]
Length = 164
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D + A M HN+G+++VV E+ V GIITERD +R + KV D MTE
Sbjct: 20 DNITAAAMEMKNHNMGSMMVVN--EKNQVVGIITERDMVRAL---ADKRLDAKVKDYMTE 74
Query: 138 ENKLITVSPDTKVLRAMQLM--TGHMLLP 164
K +T DT V A+ +M G LP
Sbjct: 75 SVKGVT--EDTTVEEALNIMLENGFRHLP 101
>gi|415887298|ref|ZP_11548879.1| inosine 5'-monophosphate dehydrogenase [Bacillus methanolicus MGA3]
gi|387585290|gb|EIJ77623.1| inosine 5'-monophosphate dehydrogenase [Bacillus methanolicus MGA3]
Length = 488
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T D VYDA M ++ + + +V E++ + GIIT RD +R I S K+
Sbjct: 100 FFLTPDHQVYDAEHLMGKYRISGVPIVNNEEEQKLVGIITNRD-MRFI-----QDYSMKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT+EN L+T T + A +++ H +
Sbjct: 154 SDVMTKEN-LVTAPVGTALAEAEKILQKHKI 183
>gi|242399180|ref|YP_002994604.1| Inosine-5'-monophosphate dehydrogenase related protein II
[Thermococcus sibiricus MM 739]
gi|242265573|gb|ACS90255.1| Inosine-5'-monophosphate dehydrogenase related protein II
[Thermococcus sibiricus MM 739]
Length = 180
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+TV K + ++ V + VV+ E+ + GI+T+RD L K++ +G K KV IMT+
Sbjct: 24 ETVERVAKILAKNKVSSAVVM---EKDEIIGIVTDRDILNKVVAKGNDPKEVKVSSIMTK 80
Query: 138 ENKLITVSPDTKVLRAMQLMTG 159
IT+ D + A++LM G
Sbjct: 81 TP--ITIEYDYDIQDAIELMMG 100
>gi|237800823|ref|ZP_04589284.1| CBS domain-containing protein [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331023680|gb|EGI03737.1| CBS domain-containing protein [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 146
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
V +A++ M + N+GAL E V G+++ERDY RK++++GRSS T V DIM+ +
Sbjct: 27 VLEALRLMAEKNIGAL---PVVENGVVVGVVSERDYARKVVLKGRSSVGTPVSDIMS--S 81
Query: 140 KLITVSPDTKVLRAMQLMT 158
+ITV V M +MT
Sbjct: 82 HVITVDSQQSVDACMGIMT 100
>gi|237653285|ref|YP_002889599.1| signal transduction protein with CBS domains [Thauera sp. MZ1T]
gi|237624532|gb|ACR01222.1| putative signal transduction protein with CBS domains [Thauera sp.
MZ1T]
Length = 480
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C+ DD + D V M + ++ +VVV + I+T+RD K+I GR +V D
Sbjct: 22 CSADDALVDIVGRMREMSISCVVVVDGAHPTA---ILTDRDLRNKVIAAGRDPAGLRVRD 78
Query: 134 IMTEENKLITVSPDTKVLRAMQLMTGH 160
+M+ +IT+ D + A+ M+ H
Sbjct: 79 VMSA--PVITIGEDDVLYEALYRMSRH 103
>gi|253681591|ref|ZP_04862388.1| CBS domain protein [Clostridium botulinum D str. 1873]
gi|416361994|ref|ZP_11682558.1| CBS domain-containing protein [Clostridium botulinum C str.
Stockholm]
gi|253561303|gb|EES90755.1| CBS domain protein [Clostridium botulinum D str. 1873]
gi|338194313|gb|EGO86795.1| CBS domain-containing protein [Clostridium botulinum C str.
Stockholm]
Length = 142
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+DTV A + M+++NVG++ V + GE+ V GI+T+RD + QG++ KV DIM+
Sbjct: 17 EDTVERAAQMMSEYNVGSIPVCR-GEE--VVGIVTDRDITLRSSAQGKNVHQQKVKDIMS 73
Query: 137 EENKLITVSPDTKVLRAMQLM 157
N ++T SP V +LM
Sbjct: 74 -SNPVVT-SPSMDVNEVARLM 92
>gi|334137702|ref|ZP_08511130.1| putative transcriptional repressor CcpN [Paenibacillus sp. HGF7]
gi|333604776|gb|EGL16162.1| putative transcriptional repressor CcpN [Paenibacillus sp. HGF7]
Length = 203
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV DAV ++ NVG LVV E+ + G+I+ +D L K+ + ++ S V +MT +
Sbjct: 83 TVGDAVVALFVDNVGGLVVAD--EEGMLLGVISPKDLL-KVTLGNPAAASMPVSLVMTRK 139
Query: 139 NKLITVSPDTKVLRAMQLM 157
+L+TV+PD V+ A + M
Sbjct: 140 PQLVTVTPDDDVIEAARKM 158
>gi|301113386|ref|XP_002998463.1| myosin-like protein [Phytophthora infestans T30-4]
gi|262111764|gb|EEY69816.1| myosin-like protein [Phytophthora infestans T30-4]
Length = 3298
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY+A M + ALVV E + GI T +D L +++ + +T V D+MT
Sbjct: 1439 TVYEATTYMAESRRPALVVSSNPEAPDLIGIFTPKDVLLRVVAEDLDVHTTPVSDVMTPN 1498
Query: 139 NKLITVSPDTKVLRAMQLM 157
+ + +P+T VL A +M
Sbjct: 1499 PE--SAAPETSVLDAFHIM 1515
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T A K M A+V+ G+++ + G++T +D LRK++ +G +++T V ++MT +
Sbjct: 2883 TAARAAKLMANTKKAAIVL---GDEQELCGMVTTKDLLRKLVAKGLYAETTTVEEVMTVD 2939
Query: 139 NKLITVSPDTKVLRAMQLM--TGHMLLP 164
L+ PD ++ ++ + G + +P
Sbjct: 2940 PDLM--GPDMSIVDGLRSLHDAGQLFMP 2965
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 28/112 (25%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKS--------------------------VAGIIT 111
DTV + + M AL+V P S V G+ T
Sbjct: 2490 DTVMEVARQMAASRKAALIVEDPNADNSSSVSGGHRSSISGGGYDIGTSALTRKVLGVFT 2549
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHMLL 163
+D L ++ G + T VG +MT + + T P+T+++ A+ +M H L
Sbjct: 2550 PKDLLLRVTGAGLDAAETTVGQVMTPDPE--TAPPNTRLVDALHIMYEHNFL 2599
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 85 KSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
++M ++ + ++VV E+ + GIIT+ D R+++ + R ST VGD+MT
Sbjct: 1966 RTMGRNKMDCVLVV--SEEGMLNGIITDTDLTRRVVSENRPVDSTLVGDVMT 2015
>gi|407456415|ref|YP_006734988.1| hypothetical protein B600_0260 [Chlamydia psittaci VS225]
gi|405783676|gb|AFS22423.1| CBS domain pair family protein [Chlamydia psittaci VS225]
Length = 185
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+C+ +DT+ D++ + + G + +V E+ + GI T+ D R + G S ++
Sbjct: 70 FCSPEDTIADSLDIFSSYGCGCVCIVN--EKFEILGIFTDGDLRRSLTRHGGDILSRRLK 127
Query: 133 DIMTEENKLITVSPDTKVLRAMQLM 157
D+MT ++I S D VL +Q+M
Sbjct: 128 DVMTPNPRVI--SEDADVLLGLQMM 150
>gi|386841418|ref|YP_006246476.1| signal-transduction protein with CBS domain [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|374101719|gb|AEY90603.1| putative signal-transduction protein with CBS domain [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|451794713|gb|AGF64762.1| putative signal-transduction protein with CBS domain [Streptomyces
hygroscopicus subsp. jinggangensis TL01]
Length = 139
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
+TT D++ KGA+ ++TV DA + MT+ VGAL + G + G++T+
Sbjct: 2 TTTARDLMT---KGAE----CVAAEETVLDAARKMTELGVGALPIC--GADDRLKGVLTD 52
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
RD + ++ G+ + K GD+ + + +T+ D V ++ M H
Sbjct: 53 RDIVVGVLGAGKDPAAVKAGDLA--QGEAVTIGADDDVDELLRTMASH 98
>gi|221633100|ref|YP_002522325.1| hypothetical protein trd_1116 [Thermomicrobium roseum DSM 5159]
gi|221156404|gb|ACM05531.1| CBS domain protein [Thermomicrobium roseum DSM 5159]
Length = 635
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
L C D TV +A + M+ V ++VVV EQ S GI+T+ D ++I GR S T V
Sbjct: 173 LTCLPDITVREAAQRMSVERVNSIVVVD--EQGSGLGILTDWDLRERVIAAGR-SLDTPV 229
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLM 157
++M+ + L+T+ D +L A++L+
Sbjct: 230 HEVMS--SPLVTIDADRLLLEAVRLL 253
>gi|150401061|ref|YP_001324827.1| signal-transduction protein [Methanococcus aeolicus Nankai-3]
gi|150013764|gb|ABR56215.1| putative signal-transduction protein with CBS domains
[Methanococcus aeolicus Nankai-3]
Length = 189
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D T Y+ + ++GAL +V G GIITE D L+ I+ + SK V +I +
Sbjct: 21 DATCYEVANILKVKDIGALTIV--GGMSKPVGIITETDMLKNIVAKNLRSKDVLVKEIAS 78
Query: 137 EENKLITVSPDTKVLRAMQLM 157
KLI++SP+ ++ A +LM
Sbjct: 79 L--KLISISPNDSIMDAAELM 97
>gi|399888963|ref|ZP_10774840.1| hypothetical protein CarbS_10612 [Clostridium arbusti SL206]
Length = 142
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+DTV A + M +HN+G++ V + GE+ V G+IT+RD + + G ++K V +IM+
Sbjct: 17 NDTVERAAQLMVEHNIGSIPVCR-GEK--VVGVITDRDITLRSVANGENAKVQTVKEIMS 73
Query: 137 EENKLITVSPDTKVLRAMQLMT 158
LI PD + A ++M+
Sbjct: 74 SNPVLI--QPDMEANDAARIMS 93
>gi|325182681|emb|CCA17136.1| myosin 29 putative [Albugo laibachii Nc14]
Length = 3123
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 12/114 (10%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
S TI+ ILK +G + V +A MT+H A+V+ KSV G++T
Sbjct: 2735 SPTIAMILKEEGDPP-----VVSPHAKVTEAAVLMTKHRKAAIVL---DHSKSVIGMVTP 2786
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM--TGHMLLP 164
+D LRK++ +G + T V IMT + + + P+ KVL ++ M G + +P
Sbjct: 2787 KDLLRKVVAKGLCADDTLVETIMTVDPEYLL--PNAKVLDGLRGMYDAGQLFMP 2838
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV+ A + M ++ A++VV + +++GI T+ D ++++ +G +T +G +MT +
Sbjct: 1176 TVFQAAELMQRNRTSAVLVV--CDDSALSGIFTDTDTAQRVLGRGLDPSATLIGAVMTPK 1233
Query: 139 NKLITVSPDTKVLRAMQLM 157
K +T+ + + A+ +M
Sbjct: 1234 PKFVTL--EDSAMDALDMM 1250
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 79 TVYDAVKSMTQ-HNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+ +A + M+Q H ALV+ K G ++GI+T+ D +++ G T + D+MT
Sbjct: 2190 NISEAARVMSQSHADAALVISKEG---VLSGILTDTDVTHRVVALGNDPNVTCIADVMTS 2246
Query: 138 ENKLITVSPDTKVLRAMQLM 157
K V + ++AM +M
Sbjct: 2247 SPKF--VDENDSAMQAMYIM 2264
>gi|161528181|ref|YP_001582007.1| signal-transduction protein [Nitrosopumilus maritimus SCM1]
gi|160339482|gb|ABX12569.1| putative signal-transduction protein with CBS domains
[Nitrosopumilus maritimus SCM1]
Length = 165
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 51/80 (63%), Gaps = 6/80 (7%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+T+ + K M + NVG ++VV ++ + GI+TERD++ KI+ + R + TK+ ++M+
Sbjct: 41 ETLEEVAKKMKEENVGCVIVV---DKIATLGIVTERDFVTKIVAE-RKTPHTKIFEVMS- 95
Query: 138 ENKLITVSPDTKVLRAMQLM 157
+ LIT+ ++ + A ++M
Sbjct: 96 -SPLITIKSESTIWEAAEIM 114
>gi|375104206|ref|ZP_09750467.1| CBS domain-containing protein [Burkholderiales bacterium JOSHI_001]
gi|374664937|gb|EHR69722.1| CBS domain-containing protein [Burkholderiales bacterium JOSHI_001]
Length = 154
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 58/105 (55%), Gaps = 9/105 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDIL KG G+ + D + +AVK+M ++G+LVV+ G+ + G++T R+
Sbjct: 3 VSDILLVKG----GTLFTVSPDSPLAEAVKTMADRDIGSLVVMSHGD---LVGMLTFREV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
++ ++ S T V +M ++ +T +P+T++ ++M G
Sbjct: 56 IKAVVKNNGSVGDTVVRSVM--DDAPLTCTPETEIDEVRRMMLGR 98
>gi|374607424|ref|ZP_09680225.1| putative signal transduction protein with CBS domains
[Mycobacterium tusciae JS617]
gi|373555260|gb|EHP81830.1| putative signal transduction protein with CBS domains
[Mycobacterium tusciae JS617]
Length = 142
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG S T + +V + ++ HN+GA+VVV P V GI++ERD
Sbjct: 3 IADVLRNKG----ASVATITPETSVSGLLTELSVHNIGAMVVVSP---DGVIGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+R + +G V +IMT + T +P+ V LMT
Sbjct: 56 VRALQERGADLLRLPVSEIMT--TFVATCTPNDSVDSLSVLMT 96
>gi|373116607|ref|ZP_09530759.1| hypothetical protein HMPREF0995_01595 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371669174|gb|EHO34277.1| hypothetical protein HMPREF0995_01595 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 145
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 83 AVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLI 142
A + +++HNVG+L V GE + GI+T+RD + + + T+V DIMT
Sbjct: 23 AARLLSRHNVGSLPVC--GEDGGLRGIVTDRDIILRCVAAEEDPLKTQVKDIMT--RNCA 78
Query: 143 TVSPDTKVLRAMQLMTG 159
VSPD A ++M
Sbjct: 79 VVSPDDDAREATRIMAA 95
>gi|144900070|emb|CAM76934.1| CBS domain protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 147
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
ILK K +GA + + ++ +A + + H +GA++ V ++AGI++ERD +R
Sbjct: 6 ILKTKARGA--GVVTISPQASIAEAARLLASHRIGAVIAVTA--NNAIAGILSERDIVRG 61
Query: 119 IIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ + S KV D+MT + T D V M+ MT
Sbjct: 62 LAQSDAACTSAKVADLMTANVQ--TCHEDDSVALLMKTMT 99
>gi|11498453|ref|NP_069681.1| inosine monophosphate dehydrogenase [Archaeoglobus fulgidus DSM
4304]
gi|2649754|gb|AAB90390.1| inosine monophosphate dehydrogenase (guaB-1) [Archaeoglobus
fulgidus DSM 4304]
Length = 189
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D+V++ K + ++ VG+ VVV+ G GI+TE+D + KI+ + + V ++M++
Sbjct: 22 DSVHNLAKKLVEYGVGSAVVVEDGRP---VGIVTEKDLISKIVARNKVPSKVLVEEVMSQ 78
Query: 138 ENKLITVSPDTKVLRAMQLM 157
+IT+ P+T + A ++M
Sbjct: 79 --PVITIGPNTSLREAARIM 96
>gi|389689370|ref|ZP_10178708.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
gi|388590281|gb|EIM30566.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
Length = 143
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
++ +A + + + +GAL++V + V GII+ERD +R + QG + V MTE
Sbjct: 22 SLSEAARVLAERRIGALLIVDG--HRPVVGIISERDIVRAVAAQGAKALDEPVSRFMTE- 78
Query: 139 NKLITVSPDTKVLRAMQLMT 158
K++T + +T + M+LMT
Sbjct: 79 -KVVTCTGETSINDIMELMT 97
>gi|412990082|emb|CCO20724.1| predicted protein [Bathycoccus prasinos]
Length = 147
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 9/66 (13%)
Query: 104 KSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE-------ENKLITVSPDTKVLRAMQL 156
++AGI++ERDYLR + + + T V +IMT E +LI+V P VL AMQ
Sbjct: 37 NAIAGIVSERDYLRAV-ATNKVTDLTTVREIMTPAEDESTGEKRLISVEPYCSVLAAMQA 95
Query: 157 MT-GHM 161
MT GH
Sbjct: 96 MTSGHF 101
>gi|171184891|ref|YP_001793810.1| signal-transduction protein [Pyrobaculum neutrophilum V24Sta]
gi|170934103|gb|ACB39364.1| putative signal-transduction protein with CBS domains [Pyrobaculum
neutrophilum V24Sta]
Length = 130
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+T+ + + + +N+GALVVV P K GIITERD +R I + ST V +
Sbjct: 23 ETLVEVAEKLATNNIGALVVVNPQNTKKPVGIITERDVVRAISMH--MPLSTPVEAFAST 80
Query: 138 ENKLITVSPDTKVLRAMQLMTGH 160
+ LIT+ D V +A +LM +
Sbjct: 81 D--LITIDEDEPVGKAAELMLKY 101
>gi|16801045|ref|NP_471313.1| hypothetical protein lin1979 [Listeria innocua Clip11262]
gi|422413408|ref|ZP_16490367.1| putative phosphotransferase, partial [Listeria innocua FSL S4-378]
gi|423098772|ref|ZP_17086480.1| putative transcriptional repressor CcpN [Listeria innocua ATCC
33091]
gi|16414480|emb|CAC97209.1| lin1979 [Listeria innocua Clip11262]
gi|313618237|gb|EFR90305.1| putative phosphotransferase [Listeria innocua FSL S4-378]
gi|370794599|gb|EHN62362.1| putative transcriptional repressor CcpN [Listeria innocua ATCC
33091]
Length = 209
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ + +VYDA+ + ++G+L V+ + + + G+++ +D L+ + +K+T +
Sbjct: 88 FFAKKETSVYDAIVMLFMEDIGSLYVI---DDEQLVGLVSRKDLLKGALADA-DTKATPI 143
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
IMT L+TV+ + KVL A + + H +
Sbjct: 144 ATIMTRMPNLVTVTKNDKVLHAAEQLVFHQI 174
>gi|390570530|ref|ZP_10250793.1| hypothetical protein WQE_19334 [Burkholderia terrae BS001]
gi|389937426|gb|EIM99291.1| hypothetical protein WQE_19334 [Burkholderia terrae BS001]
Length = 155
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D V A+ M +V ++V++ ++ GI+++RDY RK+ + GRS+ T V DIMT
Sbjct: 26 DAVLKALHLMADEDVTTVLVLQGS---NLVGILSQRDYARKVELAGRSAAGTTVADIMT- 81
Query: 138 ENKLITVSPDTKVLRAMQLM 157
++ V+P+ + + LM
Sbjct: 82 -TQVYYVTPEHTCEQCLALM 100
>gi|228474196|ref|ZP_04058933.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus hominis
SK119]
gi|228271891|gb|EEK13228.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus hominis
SK119]
Length = 488
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ D++VY+A M ++ + + +VK E +++ GIIT RD LR I S K+
Sbjct: 100 FFLIPDESVYEAEALMGKYRISGVPIVKDEESRTLVGIITNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT+EN LIT T + A ++ H +
Sbjct: 154 SDVMTKEN-LITAPVGTTLDEAEAILQKHKI 183
>gi|163800688|ref|ZP_02194588.1| hypothetical protein 1103602000593_AND4_00458 [Vibrio sp. AND4]
gi|159175037|gb|EDP59834.1| hypothetical protein AND4_00458 [Vibrio sp. AND4]
Length = 629
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 10/88 (11%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPG-------EQKSVAGIITERDYLRKIIVQGRSSKST 129
D ++ +A + M Q NV +L++V+P Q V GIIT+RD +++ +G S +
Sbjct: 166 DQSIQEAAQLMAQDNVSSLLIVEPDFVLDEDDPQSPVVGIITDRDLCTRVLAEGLSPQD- 224
Query: 130 KVGDIMTEENKLITVSPDTKVLRAMQLM 157
+V +MT E +I++ + V AM M
Sbjct: 225 EVSTVMTTE--VISLDHNAYVYEAMLTM 250
>gi|374293104|ref|YP_005040139.1| hypothetical protein AZOLI_2737 [Azospirillum lipoferum 4B]
gi|357425043|emb|CBS87924.1| conserved protein of unknown function; CBS domain [Azospirillum
lipoferum 4B]
Length = 160
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ D++KA+ + D +V K M N+GA++VV G ++ GI+TERD
Sbjct: 30 VPDVVKAQ------ELILVPEDTSVATVSKMMADKNIGAVLVVDHG---ALIGIVTERDL 80
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLM 157
K++ + + +VG +MT ++ PD + A++LM
Sbjct: 81 NNKVLSKDLDPSAVEVGAVMTRNPD--SLPPDADAVDALKLM 120
>gi|422416384|ref|ZP_16493341.1| CBS domain-containing protein [Listeria innocua FSL J1-023]
gi|313623209|gb|EFR93462.1| CBS domain-containing protein [Listeria innocua FSL J1-023]
Length = 209
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ + +VYDA+ + ++G+L V+ + + + G+++ +D L+ + +K+T +
Sbjct: 88 FFAKKETSVYDAIVMLFMEDIGSLYVI---DDEQLVGLVSRKDLLKGALADA-DTKATPI 143
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
IMT L+TV+ + KVL A + + H +
Sbjct: 144 ATIMTRMPNLVTVTKNDKVLHAAEQLVFHQI 174
>gi|23013288|ref|ZP_00053201.1| COG0517: FOG: CBS domain [Magnetospirillum magnetotacticum MS-1]
Length = 143
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 47/105 (44%), Gaps = 8/105 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDIL KG + DAV+ M VGA++VV E+ + GI TERD
Sbjct: 3 VSDILAKKGN----KIFKILPSKAMIDAVQGMAAFKVGAVLVVD--EKDNTLGIFTERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGH 160
R + G + VGD MT N L DT V M M+ H
Sbjct: 57 TRCLAAHGAPVLAEPVGDHMT-RNPLTCQGSDT-VASVMSTMSTH 99
>gi|428277422|ref|YP_005559157.1| inositol-5-monophosphate dehydrogenase [Bacillus subtilis subsp.
natto BEST195]
gi|291482379|dbj|BAI83454.1| inositol-5-monophosphate dehydrogenase [Bacillus subtilis subsp.
natto BEST195]
Length = 488
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D +K +G + + T D V+DA M ++ + + +V E + + GIIT RD LR
Sbjct: 86 DKVKRSERGVITNPFFLTPDHQVFDAEHLMGKYRISGVPIVNNEEDQKLVGIITNRD-LR 144
Query: 118 KIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
I S S K+ D+MT+E +L+T S T + A +++ H +
Sbjct: 145 FI-----SDYSMKISDVMTKE-ELVTASVGTTLDEAEKILQKHKI 183
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.130 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,234,836,593
Number of Sequences: 23463169
Number of extensions: 76176860
Number of successful extensions: 240418
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 2884
Number of HSP's that attempted gapping in prelim test: 237921
Number of HSP's gapped (non-prelim): 4221
length of query: 164
length of database: 8,064,228,071
effective HSP length: 125
effective length of query: 39
effective length of database: 9,426,299,242
effective search space: 367625670438
effective search space used: 367625670438
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)