BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031190
(164 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LEV3|CBSX3_ARATH CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis
thaliana GN=CBSX3 PE=1 SV=1
Length = 206
Score = 266 bits (680), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 128/159 (80%), Positives = 145/159 (91%), Gaps = 1/159 (0%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRP-VVSSRFESVSSARMEEHGFESTTISDI 59
MQG I+SF+S GN+VK +VLQ +R++NP ++P V SR ES ARMEE GFESTTISD+
Sbjct: 1 MQGVIRSFVSGGNVVKGSVLQHLRVINPAIQPSVFCSRSESTQPARMEESGFESTTISDV 60
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
+K+KGK ADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ+++AGIITERDYLRKI
Sbjct: 61 MKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQALAGIITERDYLRKI 120
Query: 120 IVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
IVQGRSSKSTKVGDIMTEENKLITV+P+TKVLRAMQLMT
Sbjct: 121 IVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMT 159
>sp|O34682|YLBB_BACSU Uncharacterized protein YlbB OS=Bacillus subtilis (strain 168)
GN=ylbB PE=4 SV=2
Length = 148
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY-LRKIIVQGRSSKSTKV 131
+CT D VY+A M NVGA+ VV + +++ GI+T+RD LR I + + S K+
Sbjct: 14 YCTVLDNVYEAAVKMKDANVGAIPVVDE-DGETLVGIVTDRDLVLRGIAI--KKPNSQKI 70
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D MTE K ++V D V + LM H L
Sbjct: 71 TDAMTE--KPVSVEEDASVDEVLHLMASHQL 99
>sp|Q58069|Y653_METJA Uncharacterized protein MJ0653 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0653 PE=4 SV=1
Length = 194
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 11/89 (12%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T + ++YD MT++N+GA+V+V E GI+TERD +++++ SK+ K D+
Sbjct: 21 TKNMSIYDIANIMTENNIGAVVIV---ENNKPIGIVTERDIVKRVV-----SKNLKPKDV 72
Query: 135 MTEE---NKLITVSPDTKVLRAMQLMTGH 160
+ EE K+IT+ + + A ++M H
Sbjct: 73 LAEEVMSKKIITIPQNASITEAAKIMATH 101
>sp|P54606|YHCV_BACSU CBS domain-containing protein YhcV OS=Bacillus subtilis (strain
168) GN=yhcV PE=4 SV=1
Length = 140
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ T+ +A M QHNVGA+ VV EQ + G++T+RD + QGR + T V ++M+
Sbjct: 18 NQTIQEAASLMKQHNVGAIPVV---EQGVLKGMLTDRDIALRTTAQGRDGQ-TPVSEVMS 73
Query: 137 EENKLITVSPDTKVLRAMQLMTGHML 162
E L++ +P+ + A QLM H +
Sbjct: 74 TE--LVSGNPNMSLEDASQLMAQHQI 97
>sp|O67500|Y1546_AQUAE Uncharacterized phosphosugar isomerase aq_1546 OS=Aquifex aeolicus
(strain VF5) GN=aq_1546 PE=3 SV=1
Length = 322
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D ++ +A+ MT GA VV E+ + GIIT+ D LR+ + +G S ++T+ D+MT
Sbjct: 215 DTSMKEAIIEMTAKGFGATAVVN--EEGKLVGIITDGD-LRRFVNRGGSFENTRAKDVMT 271
Query: 137 EENKLITVSPDTKVLRAMQLMTGH 160
+ K T+ PD L+A++ M H
Sbjct: 272 KNPK--TIKPDELALKALRKMEDH 293
>sp|P50100|Y525_METKA Uncharacterized protein MK0525 OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=MK0525 PE=4
SV=2
Length = 196
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+T + M +H +G++V+V E+ GIITERD + K++ QG++ DIM++
Sbjct: 21 ETAVEIAYKMREHGIGSVVIV--NEKDEPIGIITERDLVIKVVSQGKNPDEVIARDIMSQ 78
Query: 138 ENKLITVSPDTKVLRAMQLM 157
+ITV D +V A++LM
Sbjct: 79 --PVITVEEDMEVNEAVKLM 96
>sp|P21879|IMDH_BACSU Inosine-5'-monophosphate dehydrogenase OS=Bacillus subtilis (strain
168) GN=guaB PE=1 SV=2
Length = 488
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D +K +G + + T D V+DA M ++ + + +V E + + GIIT RD LR
Sbjct: 86 DKVKRSERGVITNPFFLTPDHQVFDAEHLMGKYRISGVPIVNNEEDQKLVGIITNRD-LR 144
Query: 118 KIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
I S S K+ D+MT+E +L+T S T + A +++ H +
Sbjct: 145 FI-----SDYSMKISDVMTKE-ELVTASVGTTLDEAEKILQKHKI 183
>sp|P32987|YBP3_ACIAM Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus
ambivalens PE=4 SV=1
Length = 164
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 13/90 (14%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK--STKVGDIMT 136
T+ +A K M +HN+G+LVV+ Q V GIITERD IV+ S++ + V MT
Sbjct: 21 TIAEAAKEMKEHNLGSLVVID--SQNRVVGIITERD-----IVKAASNRDIDSPVEKYMT 73
Query: 137 EENKLITVSPDTKVLRAMQLM--TGHMLLP 164
++ K +T DT+V A+ +M G LP
Sbjct: 74 KDVKGVT--EDTEVTDALDIMLNNGFRHLP 101
>sp|Q4L385|IMDH_STAHJ Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=guaB PE=3 SV=1
Length = 488
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T D++VY+A M ++ + + +V E + + GI+T RD LR I S K+
Sbjct: 100 FYLTPDESVYEAEALMGKYRISGVPIVSDKESRELVGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT+EN LIT T + A ++ H +
Sbjct: 154 SDVMTKEN-LITAPVGTTLDEAETILQEHKI 183
>sp|Q57892|Y450_METJA Uncharacterized protein MJ0450 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0450 PE=4 SV=1
Length = 186
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D +VYD K M + +V ++VV + T++D ++K++++ KV DI +
Sbjct: 20 DVSVYDVAKLMVEQDVPCVLVVCERPNHESIEVATDKDIIKKVLIRKLPPDKVKVEDISS 79
Query: 137 EENKLITVSPDTKVLRAMQLMTGH 160
KL+T+ P+T + A+++M +
Sbjct: 80 --GKLVTIPPNTTIDEALEIMNKY 101
>sp|Q6GC82|IMDH_STAAS Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain MSSA476) GN=guaB PE=3 SV=1
Length = 488
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++VY+A M ++ + + +V E +++ GI+T RD LR I S K+
Sbjct: 100 FFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT+EN LIT +T + A +++ H +
Sbjct: 154 VDVMTQEN-LITAPVNTTLEEAEKILQKHKI 183
>sp|Q6GJQ7|IMDH_STAAR Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain MRSA252) GN=guaB PE=3 SV=1
Length = 488
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++VY+A M ++ + + +V E +++ GI+T RD LR I S K+
Sbjct: 100 FFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT+EN LIT +T + A +++ H +
Sbjct: 154 VDVMTQEN-LITAPVNTTLEEAEKILQKHKI 183
>sp|P99106|IMDH_STAAN Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain N315) GN=guaB PE=1 SV=1
Length = 488
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++VY+A M ++ + + +V E +++ GI+T RD LR I S K+
Sbjct: 100 FFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT+EN LIT +T + A +++ H +
Sbjct: 154 VDVMTQEN-LITAPVNTTLEEAEKILQKHKI 183
>sp|P65169|IMDH_STAAM Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=guaB PE=1 SV=1
Length = 488
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++VY+A M ++ + + +V E +++ GI+T RD LR I S K+
Sbjct: 100 FFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT+EN LIT +T + A +++ H +
Sbjct: 154 VDVMTQEN-LITAPVNTTLEEAEKILQKHKI 183
>sp|Q5HIQ7|IMDH_STAAC Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain COL) GN=guaB PE=3 SV=1
Length = 488
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++VY+A M ++ + + +V E +++ GI+T RD LR I S K+
Sbjct: 100 FFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT+EN LIT +T + A +++ H +
Sbjct: 154 VDVMTQEN-LITAPVNTTLEEAEKILQKHKI 183
>sp|Q2YVL6|IMDH_STAAB Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=guaB PE=3 SV=1
Length = 488
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++VY+A M ++ + + +V E +++ GI+T RD LR I S K+
Sbjct: 100 FFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT+EN LIT +T + A +++ H +
Sbjct: 154 VDVMTQEN-LITAPVNTTLEEAEKILQKHKI 183
>sp|Q2G0Y7|IMDH_STAA8 Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain NCTC 8325) GN=guaB PE=3 SV=1
Length = 488
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++VY+A M ++ + + +V E +++ GI+T RD LR I S K+
Sbjct: 100 FFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT+EN LIT +T + A +++ H +
Sbjct: 154 VDVMTQEN-LITAPVNTTLEEAEKILQKHKI 183
>sp|Q2FJM6|IMDH_STAA3 Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain USA300) GN=guaB PE=3 SV=1
Length = 488
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++VY+A M ++ + + +V E +++ GI+T RD LR I S K+
Sbjct: 100 FFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT+EN LIT +T + A +++ H +
Sbjct: 154 VDVMTQEN-LITAPVNTTLEEAEKILQKHKI 183
>sp|Q8NY70|IMDH_STAAW Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain MW2) GN=guaB PE=3 SV=1
Length = 488
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++VY+A M ++ + + +V E +++ GI+T RD LR I S K+
Sbjct: 100 FFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT+EN LIT +T + A +++ H +
Sbjct: 154 VDVMTQEN-LITAPVNTTLEEAEKILQKHKI 183
>sp|Q49UU8|IMDH_STAS1 Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=guaB PE=3 SV=1
Length = 488
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++V++A M ++ + + +V E + GIIT RD LR I S K+
Sbjct: 100 FFLTPEESVFEAEALMGKYRISGVPIVNNKEDRQFVGIITNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT+E +L+T T + A +L+ H +
Sbjct: 154 SDVMTKE-QLVTAPVGTTLDEAEKLLQQHKI 183
>sp|Q8CMQ7|IMDH_STAES Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=guaB PE=3 SV=1
Length = 488
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++VY+A M ++ + + +V E + + GI+T RD LR I S K+
Sbjct: 100 FFLTPEESVYEAEALMGKYRISGVPIVDNQEDRKLIGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT++N LIT T + A ++ H +
Sbjct: 154 SDVMTKDN-LITAPVGTTLDEAEAILQKHKI 183
>sp|Q5HRX2|IMDH_STAEQ Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=guaB PE=3
SV=1
Length = 488
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T +++VY+A M ++ + + +V E + + GI+T RD LR I S K+
Sbjct: 100 FFLTPEESVYEAEALMGKYRISGVPIVDNQEDRKLIGILTNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162
D+MT++N LIT T + A ++ H +
Sbjct: 154 SDVMTKDN-LITAPVGTTLDEAEAILQKHKI 183
>sp|Q9FMV3|Y5349_ARATH CBS domain-containing protein CBSCBSPB1 OS=Arabidopsis thaliana
GN=CBSCBSPB1 PE=1 SV=1
Length = 543
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T+Y+A K M V AL++ E + GI+T++D ++I Q + + T V +MT +
Sbjct: 71 TIYEACKRMASRRVDALLLTDSNEM--LCGILTDKDIATRVISQELNVEETPVSKVMT-K 127
Query: 139 NKLITVSPDTKVLRAMQLM 157
N + +S +T + A+Q M
Sbjct: 128 NPMFVLS-ETLAVEALQKM 145
>sp|Q58629|Y1232_METJA Uncharacterized protein MJ1232 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1232 PE=4 SV=1
Length = 296
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS 128
D+ +YDA+K M ++NVG LV+V + + GIIT D L+ I+ G+ ++
Sbjct: 246 DEKIYDALKIMNKNNVGRLVIVD--DNNKIVGIITRTDILK--IISGKFPEN 293
>sp|P75952|YCFQ_ECOLI Uncharacterized HTH-type transcriptional regulator YcfQ
OS=Escherichia coli (strain K12) GN=ycfQ PE=4 SV=2
Length = 210
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 18/126 (14%)
Query: 31 RPVVSSRFESVSSAR--MEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAV---- 84
RP V R ++ A +HG+E+T+++D+++A G A + T + ++ AV
Sbjct: 15 RPKVFDRDAALDKAMKLFWQHGYEATSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRY 74
Query: 85 --KSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLI 142
+ +H E+KSV + DY I +SK T G M N
Sbjct: 75 IDRFAAKHEAQLFC-----EEKSVESALA--DYF-AAIANCFTSKDTPAGCFMI--NNCT 124
Query: 143 TVSPDT 148
T+SPD+
Sbjct: 125 TLSPDS 130
>sp|Q9LF97|Y3295_ARATH CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis thaliana
GN=CBSCBSPB3 PE=1 SV=1
Length = 556
Score = 37.7 bits (86), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV+DA + M V A ++ ++GI+T++D ++I +G T V +MT
Sbjct: 80 TVFDACRRMAARRVDACLLTD--SSALLSGIVTDKDVATRVIAEGLRPDQTLVSKVMTRN 137
Query: 139 NKLITVSPDTKVLRAMQLM 157
I V+ D+ L A+Q M
Sbjct: 138 P--IFVTSDSLALEALQKM 154
Score = 30.8 bits (68), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D V A K M V + V++ G + ++GI+T +D L +++ Q S + T V +MT
Sbjct: 248 DPVSVAAKRMRDLRVNS-VIISTGNK--ISGILTSKDILMRVVAQNLSPELTLVEKVMTP 304
Query: 138 ENKLITVSPDTKVLRAMQLM 157
+ ++ +T +L A+ M
Sbjct: 305 NPECASL--ETTILDALHTM 322
>sp|Q9SJQ5|Y2650_ARATH CBS domain-containing protein CBSCBSPB2 OS=Arabidopsis thaliana
GN=CBSCBSPB2 PE=2 SV=1
Length = 536
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV+DA + M V A+++ ++GI+T++D ++I +G + T V +MT
Sbjct: 78 TVFDACRRMAARRVDAVLLTD--SSALLSGIVTDKDIATRVIAEGLRPEHTLVSKVMTRN 135
Query: 139 NKLITVSPDTKVLRAMQLM 157
I V+ D+ + A+Q M
Sbjct: 136 P--IFVTSDSLAIEALQKM 152
Score = 33.1 bits (74), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D V+ A K M V + V++ G + + GI+T +D L +++ Q S + T V +MT
Sbjct: 241 DPVFVASKKMRDLRVNS-VIIAVGNK--IHGILTSKDILMRVVAQNLSPELTLVEKVMTP 297
Query: 138 ENKLITVSPDTKVLRAMQLM 157
+ ++ +T +L A+ +M
Sbjct: 298 NPECASI--ETTILDALHIM 315
>sp|P50097|IMDH_TRIFO Inosine-5'-monophosphate dehydrogenase OS=Tritrichomonas foetus
GN=IMPDH PE=1 SV=1
Length = 503
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Query: 77 DDTVYD--AVKSMTQHNVGALVVVKPGEQKSVA-GIITERDYLRKIIVQGRSSKSTKVGD 133
D T D A+ T HN + V G V G++T+RDY + + TKV D
Sbjct: 113 DQTFADVLAISQRTTHNT--VAVTDDGTPHGVLLGLVTQRDYPIDL-----TQTETKVSD 165
Query: 134 IMTEENKLITVSPDTKVLRAMQLM 157
+MT +KL+T DTK+ A +++
Sbjct: 166 MMTPFSKLVTAHQDTKLSEANKII 189
>sp|P0DH79|Y5064_ARATH CBS domain-containing protein CBSCBSPB5 OS=Arabidopsis thaliana
GN=CBSCBSPB5 PE=2 SV=1
Length = 548
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T+++A + M V AL++ + GI+T+RD K+I + + + T V +MT +
Sbjct: 79 TLFEACRRMAARRVDALLLTD--SNALLCGILTDRDIATKVIAKQLNLEETPVSKVMT-K 135
Query: 139 NKLITVSPDTKVLRAMQLM 157
N + +S DT + A+Q M
Sbjct: 136 NPVFVLS-DTIAVEALQKM 153
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D+TV M ++ A +V+ + + GI+T +D L ++I Q ++T V +MT
Sbjct: 246 DETVLGVTMKMVEYQSSAAMVMV---ENKLVGILTSKDILMRVISQNLPQETTTVEKVMT 302
Query: 137 EENKLITVSPDTKVLRAMQLM 157
+ TV D ++ A+ +M
Sbjct: 303 PNPESATV--DMAIVEALHIM 321
>sp|Q0WLC7|Y5053_ARATH CBS domain-containing protein CBSCBSPB4 OS=Arabidopsis thaliana
GN=CBSCBSPB4 PE=2 SV=2
Length = 548
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T+++A + M V AL++ + GI+T+RD K+I + + + T V +MT +
Sbjct: 79 TLFEACRRMAARRVDALLLTD--SNALLCGILTDRDIATKVIAKQLNLEETPVSKVMT-K 135
Query: 139 NKLITVSPDTKVLRAMQLM 157
N + +S DT + A+Q M
Sbjct: 136 NPVFVLS-DTIAVEALQKM 153
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D+TV M ++ A +V+ + + GI+T +D L ++I Q ++T V +MT
Sbjct: 246 DETVLGVTMKMVEYQSSAAMVMV---ENKLVGILTSKDILMRVISQNLPQETTTVEKVMT 302
Query: 137 EENKLITVSPDTKVLRAMQLM 157
+ TV D ++ A+ +M
Sbjct: 303 PNPESATV--DMAIVEALHIM 321
>sp|P15889|YR33_THEPE Uncharacterized 33.4 kDa protein in ribosomal RNA operon
OS=Thermofilum pendens PE=4 SV=1
Length = 300
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Query: 83 AVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
AV M +H +GALVV G+ + GI+TERD L ++
Sbjct: 243 AVSLMKKHGIGALVVTHDGKPR---GIVTERDVLTRL 276
>sp|O13648|ANM3_SCHPO Ribosomal protein arginine N-methytransferase rmt3
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rmt3 PE=1 SV=3
Length = 543
Score = 33.1 bits (74), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 74 CTTDDTVYDAVKSMTQHNVGA----LVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
C D+ + +K + H A VK I +Y+R + +G++
Sbjct: 60 CLFCDSTFTCLKDLWSHCKEAHNFDFYQVKQQNNLDFYACIKLVNYIRSQVKEGKTPDLD 119
Query: 130 KVGDIMTEENKLITVSPDTKVLRAM 154
K+ DI+ + +I+V PD VL ++
Sbjct: 120 KLSDILRSDEYMISVLPDDSVLFSL 144
>sp|Q0BWA1|PDRP_GRABC Putative pyruvate, phosphate dikinase regulatory protein
OS=Granulibacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1) GN=GbCGDNIH1_0003 PE=3 SV=1
Length = 297
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
V D V S+ QH++G + +PG Q + + DY R+I
Sbjct: 104 VLDPVLSLLQHHIGEQAIARPGRQ-----YVLDADYFRRI 138
>sp|O14344|IMDH_SCHPO Inosine-5'-monophosphate dehydrogenase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=gua1 PE=2 SV=1
Length = 524
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGI-ITERDYLR-KII-------VQGRSSKSTK 130
+ D V QH VG ++ +K E K +GI ITE LR K++ VQ +T
Sbjct: 122 ILDPVVFSPQHTVGDVLKIK--ETKGFSGIPITENGKLRGKLVGIVTSRDVQFHKDTNTP 179
Query: 131 VGDIMTEENKLITVSPDTKVLRAMQLM 157
V ++MT +LIT + + RA +++
Sbjct: 180 VTEVMTPREELITTAEGISLERANEML 206
>sp|O13965|MUG70_SCHPO Meiotically up-regulated gene 70 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug70 PE=1 SV=1
Length = 730
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEN 139
V + + M ++VV EQ +AGI+T D + + G +++ T + DIM+
Sbjct: 82 VTETAQLMAAKRQNCVLVVDDDEQ--LAGIVTATDIATRCVGAGLNARQTLIADIMSTSP 139
Query: 140 KLITVSPDTKVLRAMQLMTGH 160
IT DT+ A+ LM H
Sbjct: 140 LCITS--DTRFDDALLLMIEH 158
>sp|Q0BS63|LPXB_GRABC Lipid-A-disaccharide synthase OS=Granulibacter bethesdensis
(strain ATCC BAA-1260 / CGDNIH1) GN=lpxB PE=3 SV=1
Length = 393
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 6/42 (14%)
Query: 12 GNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFES 53
G+++ + ++ +R +NP S RF + RMEE GF+S
Sbjct: 15 GDVLGARLIHALRAINP------SIRFAGIGGPRMEECGFQS 50
>sp|Q0UQV6|BST1_PHANO GPI inositol-deacylase OS=Phaeosphaeria nodorum (strain SN15 / ATCC
MYA-4574 / FGSC 10173) GN=BST1 PE=3 SV=2
Length = 1049
Score = 30.8 bits (68), Expect = 3.5, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 63/157 (40%), Gaps = 19/157 (12%)
Query: 2 QGAIQSFLSHGNIVKSAV---LQRIRLVNPM---LRPVVSSRFESVSSARMEEHGFESTT 55
Q A+ S+ SA LQ + LV+ L +VSS + S++S E HGF T
Sbjct: 267 QNAVNSYWRSAYAQDSAKDNPLQHVTLVSIAGGGLDNIVSSDYASIASIVPETHGF--TV 324
Query: 56 ISDILKAKGKGADG-SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
S + GAD + WC D V+++ VV + +
Sbjct: 325 FSSSIPNCWTGADHLAITWC--DQVRKSIVRALYD-------VVDVSQAMQTLPVTNRMR 375
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVL 151
+ +K + G + K MT E L+TV DT +L
Sbjct: 376 FFKKWFLTGLEDIAEKTLP-MTTEATLLTVDVDTAIL 411
>sp|Q57647|Y188_METJA Uncharacterized protein MJ0188 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0188 PE=4 SV=1
Length = 265
Score = 30.0 bits (66), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ D+TV D +K + + + VV+ G+ + GI++ D + K + KV +
Sbjct: 16 VSKDNTVKDVIKLLKETGHNSFPVVENGK---LIGIVSVHDIVGK-------DDNEKVEN 65
Query: 134 IMTEENKLITVSPDTKVLRAMQLM--TGHMLLP 164
+MT+ ++ +PD ++ ++M TG LP
Sbjct: 66 VMTKRKDMVVTTPDANIMDVGRIMFRTGFSKLP 98
>sp|Q7UJL3|IMDH_RHOBA Inosine-5'-monophosphate dehydrogenase OS=Rhodopirellula baltica
(strain SH1) GN=guaB PE=3 SV=1
Length = 539
Score = 29.6 bits (65), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 30/160 (18%)
Query: 15 VKSAVLQRIRLVNPMLRPVVSSRFESVSSARM-----EEHGFE--------STTISDILK 61
V S + QRIRL P+ +SS ++V+ + M +E G ++LK
Sbjct: 77 VSSQMTQRIRLQIPL----ISSPMDTVTESEMAIALAKEGGLGIVHKNLSVRRQTEEVLK 132
Query: 62 AKGKGADG---SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
K + A+G + + V A + M + NV + +V+ + +++AGI+T RD LR
Sbjct: 133 VK-RSANGIIVNPVTLNPAQKVSAAAELMDRANVSGIPIVE--DDRTLAGILTRRD-LRF 188
Query: 119 IIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMT 158
+ + +MT EN L+T + + +A +++T
Sbjct: 189 L-----EDPDMPISQVMTREN-LVTAVGNVTLAQAEKILT 222
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,435,476
Number of Sequences: 539616
Number of extensions: 1848285
Number of successful extensions: 6304
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 6267
Number of HSP's gapped (non-prelim): 59
length of query: 164
length of database: 191,569,459
effective HSP length: 108
effective length of query: 56
effective length of database: 133,290,931
effective search space: 7464292136
effective search space used: 7464292136
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)