Query 031190
Match_columns 164
No_of_seqs 151 out of 2343
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 16:44:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031190.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031190hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k6e_A CBS domain protein; str 99.7 2.5E-16 8.4E-21 110.8 7.4 100 54-162 15-117 (156)
2 4esy_A CBS domain containing m 99.6 6E-17 2E-21 115.1 3.8 103 50-163 14-137 (170)
3 2yzi_A Hypothetical protein PH 99.6 1.9E-15 6.5E-20 103.3 10.1 102 50-163 3-104 (138)
4 3lv9_A Putative transporter; C 99.6 2.4E-15 8.3E-20 104.2 10.4 99 50-162 19-118 (148)
5 3fhm_A Uncharacterized protein 99.6 3.7E-15 1.3E-19 105.2 10.9 104 51-162 21-124 (165)
6 3hf7_A Uncharacterized CBS-dom 99.6 1.8E-15 6.2E-20 102.9 8.5 99 53-162 1-100 (130)
7 3kxr_A Magnesium transporter, 99.6 1.2E-15 4E-20 112.0 7.9 134 12-163 11-148 (205)
8 2rc3_A CBS domain; in SITU pro 99.6 4E-15 1.4E-19 101.4 9.7 99 55-162 7-105 (135)
9 3jtf_A Magnesium and cobalt ef 99.6 3.5E-15 1.2E-19 101.3 8.6 97 52-163 3-100 (129)
10 3i8n_A Uncharacterized protein 99.6 1.5E-15 5.2E-20 103.1 6.4 99 51-162 3-102 (130)
11 3lhh_A CBS domain protein; str 99.6 6.5E-15 2.2E-19 104.8 9.7 99 50-162 38-137 (172)
12 3lfr_A Putative metal ION tran 99.6 3.1E-15 1E-19 102.5 7.7 98 53-162 2-100 (136)
13 3nqr_A Magnesium and cobalt ef 99.6 2.1E-15 7.1E-20 102.0 6.7 98 53-163 2-100 (127)
14 3fv6_A YQZB protein; CBS domai 99.6 4.4E-15 1.5E-19 104.2 8.6 103 49-162 12-114 (159)
15 3k2v_A Putative D-arabinose 5- 99.6 9.2E-15 3.1E-19 101.4 9.6 99 54-162 28-126 (149)
16 1y5h_A Hypothetical protein RV 99.6 3.4E-15 1.2E-19 101.4 7.2 100 52-162 6-105 (133)
17 3kpb_A Uncharacterized protein 99.6 1E-14 3.5E-19 97.5 9.5 93 54-162 1-93 (122)
18 3lqn_A CBS domain protein; csg 99.6 6.1E-15 2.1E-19 102.2 8.5 103 51-162 12-118 (150)
19 1pbj_A Hypothetical protein; s 99.6 1.2E-14 4.3E-19 97.4 9.6 96 54-162 1-96 (125)
20 3oco_A Hemolysin-like protein 99.6 7.4E-15 2.5E-19 102.4 8.7 101 50-163 16-117 (153)
21 2o16_A Acetoin utilization pro 99.6 2.2E-14 7.4E-19 100.8 10.5 101 52-163 3-110 (160)
22 3oi8_A Uncharacterized protein 99.6 3.1E-15 1.1E-19 104.8 5.8 100 50-163 34-134 (156)
23 2rih_A Conserved protein with 99.6 3.2E-14 1.1E-18 97.6 10.3 97 53-163 4-102 (141)
24 2ef7_A Hypothetical protein ST 99.6 2E-14 6.7E-19 97.6 9.1 97 52-162 2-98 (133)
25 1pvm_A Conserved hypothetical 99.6 3E-14 1E-18 102.3 10.2 100 52-162 7-106 (184)
26 4fry_A Putative signal-transdu 99.5 4.1E-14 1.4E-18 98.8 9.9 100 54-162 7-109 (157)
27 2p9m_A Hypothetical protein MJ 99.5 3.5E-14 1.2E-18 96.9 8.7 98 51-161 5-103 (138)
28 3ocm_A Putative membrane prote 99.5 3E-14 1E-18 101.7 8.5 99 50-163 32-131 (173)
29 3gby_A Uncharacterized protein 99.5 1.1E-14 3.7E-19 98.5 5.7 97 52-162 3-99 (128)
30 3ctu_A CBS domain protein; str 99.5 1.2E-14 4E-19 101.5 5.9 102 51-161 12-116 (156)
31 1yav_A Hypothetical protein BS 99.5 4.7E-14 1.6E-18 98.8 8.4 103 51-162 11-117 (159)
32 3ghd_A A cystathionine beta-sy 99.5 2.8E-14 9.7E-19 87.3 6.0 68 71-143 2-69 (70)
33 2oux_A Magnesium transporter; 99.5 5.6E-14 1.9E-18 107.8 8.7 96 50-163 133-233 (286)
34 2j9l_A Chloride channel protei 99.5 1.4E-13 4.9E-18 98.2 9.5 107 51-162 8-139 (185)
35 2emq_A Hypothetical conserved 99.5 5.4E-14 1.9E-18 98.0 7.1 103 51-162 8-114 (157)
36 2pfi_A Chloride channel protei 99.5 1.7E-13 5.9E-18 95.9 9.5 104 51-163 10-122 (164)
37 3sl7_A CBS domain-containing p 99.5 4.5E-14 1.5E-18 100.3 6.2 102 53-163 3-130 (180)
38 4gqw_A CBS domain-containing p 99.5 1.1E-13 3.7E-18 95.6 7.9 103 52-163 3-117 (152)
39 2nyc_A Nuclear protein SNF4; b 99.5 1.5E-13 5.1E-18 94.1 8.2 102 52-162 6-114 (144)
40 3pc3_A CG1753, isoform A; CBS, 99.5 1E-13 3.5E-18 114.6 8.5 99 52-162 382-482 (527)
41 2uv4_A 5'-AMP-activated protei 99.5 1.8E-13 6.2E-18 95.1 8.2 99 51-162 20-124 (152)
42 1o50_A CBS domain-containing p 99.5 1.8E-13 6.3E-18 95.6 8.1 101 49-162 11-126 (157)
43 2yvy_A MGTE, Mg2+ transporter 99.4 2.8E-13 9.6E-18 103.4 7.1 96 50-163 131-231 (278)
44 3l2b_A Probable manganase-depe 99.4 7.3E-13 2.5E-17 99.0 8.7 59 53-120 6-64 (245)
45 1vr9_A CBS domain protein/ACT 99.4 9.1E-13 3.1E-17 96.9 8.3 94 52-163 11-104 (213)
46 4af0_A Inosine-5'-monophosphat 99.4 7.3E-14 2.5E-18 113.9 1.5 120 32-162 94-231 (556)
47 3kh5_A Protein MJ1225; AMPK, A 99.4 2.2E-12 7.4E-17 97.4 9.6 97 53-162 83-179 (280)
48 3t4n_C Nuclear protein SNF4; C 99.4 1.4E-12 4.9E-17 100.8 8.0 103 52-163 185-294 (323)
49 2zy9_A Mg2+ transporter MGTE; 99.3 8.9E-13 3E-17 107.7 6.4 96 50-163 151-251 (473)
50 3fio_A A cystathionine beta-sy 99.3 3E-12 1E-16 77.5 6.0 65 71-138 2-66 (70)
51 4fxs_A Inosine-5'-monophosphat 99.3 2E-12 6.8E-17 106.2 6.3 117 31-163 44-183 (496)
52 3org_A CMCLC; transporter, tra 99.3 1.3E-12 4.4E-17 110.2 5.1 103 52-163 451-600 (632)
53 3ddj_A CBS domain-containing p 99.3 2.8E-12 9.7E-17 98.0 6.5 97 52-162 91-187 (296)
54 3kh5_A Protein MJ1225; AMPK, A 99.3 4.6E-12 1.6E-16 95.6 7.6 89 70-162 13-115 (280)
55 3ddj_A CBS domain-containing p 99.3 6.1E-12 2.1E-16 96.1 7.8 100 52-162 154-258 (296)
56 3usb_A Inosine-5'-monophosphat 99.3 1.4E-11 4.8E-16 101.5 10.0 122 31-162 68-207 (511)
57 2yzq_A Putative uncharacterize 99.3 2.4E-12 8.4E-17 97.4 5.0 91 54-162 1-91 (282)
58 2yzq_A Putative uncharacterize 99.3 1.3E-11 4.5E-16 93.4 7.9 100 52-162 58-157 (282)
59 2qrd_G Protein C1556.08C; AMPK 99.3 1.9E-11 6.6E-16 94.8 8.7 102 53-163 181-289 (334)
60 2d4z_A Chloride channel protei 99.2 3.4E-11 1.2E-15 90.7 7.6 61 51-120 10-72 (250)
61 2qrd_G Protein C1556.08C; AMPK 99.1 5.5E-11 1.9E-15 92.2 5.8 105 52-163 20-141 (334)
62 2v8q_E 5'-AMP-activated protei 99.1 2.8E-11 9.5E-16 93.8 4.0 104 51-163 32-150 (330)
63 2v8q_E 5'-AMP-activated protei 99.1 1.4E-10 4.7E-15 89.9 7.3 90 70-163 202-297 (330)
64 4avf_A Inosine-5'-monophosphat 99.1 5.9E-12 2E-16 103.2 -1.6 115 31-162 43-180 (490)
65 3t4n_C Nuclear protein SNF4; C 99.1 2.6E-10 8.9E-15 88.0 7.3 89 70-162 123-221 (323)
66 1me8_A Inosine-5'-monophosphat 99.1 7.7E-12 2.6E-16 102.9 -1.8 119 30-162 51-194 (503)
67 1zfj_A Inosine monophosphate d 99.0 6.1E-10 2.1E-14 91.2 8.7 92 56-163 92-185 (491)
68 1vr9_A CBS domain protein/ACT 99.0 5.2E-10 1.8E-14 82.0 6.8 94 53-162 71-164 (213)
69 1vrd_A Inosine-5'-monophosphat 99.0 6.6E-11 2.3E-15 97.1 -0.3 117 31-162 50-188 (494)
70 3nqr_A Magnesium and cobalt ef 98.9 2.5E-09 8.4E-14 71.8 7.3 59 52-120 67-125 (127)
71 3i8n_A Uncharacterized protein 98.9 3.3E-09 1.1E-13 71.4 7.6 59 52-120 70-128 (130)
72 3jtf_A Magnesium and cobalt ef 98.9 4.3E-09 1.5E-13 70.8 7.4 60 52-121 67-126 (129)
73 4esy_A CBS domain containing m 98.9 1.1E-09 3.8E-14 77.2 4.6 59 52-120 103-161 (170)
74 4fry_A Putative signal-transdu 98.9 4.8E-09 1.6E-13 72.7 7.8 75 52-137 76-150 (157)
75 3hf7_A Uncharacterized CBS-dom 98.9 4.3E-09 1.5E-13 71.0 7.2 59 52-120 68-126 (130)
76 4gqw_A CBS domain-containing p 98.9 5.5E-09 1.9E-13 71.6 7.6 60 52-120 83-142 (152)
77 3lv9_A Putative transporter; C 98.9 6E-09 2E-13 71.6 7.6 59 53-121 87-145 (148)
78 3sl7_A CBS domain-containing p 98.9 6.4E-09 2.2E-13 73.4 7.2 61 52-121 96-156 (180)
79 3kpb_A Uncharacterized protein 98.9 5.6E-09 1.9E-13 69.2 6.4 57 54-119 62-118 (122)
80 3oco_A Hemolysin-like protein 98.8 8.6E-09 2.9E-13 71.3 7.3 59 53-121 85-143 (153)
81 3lhh_A CBS domain protein; str 98.8 9.6E-09 3.3E-13 72.6 7.6 59 53-121 106-164 (172)
82 3lfr_A Putative metal ION tran 98.8 3.7E-09 1.3E-13 71.9 5.1 60 51-120 67-126 (136)
83 1pbj_A Hypothetical protein; s 98.8 1.2E-08 4.2E-13 67.7 6.9 59 52-120 63-121 (125)
84 3gby_A Uncharacterized protein 98.8 4.7E-09 1.6E-13 70.4 4.8 58 54-120 68-125 (128)
85 2ef7_A Hypothetical protein ST 98.8 1.1E-08 3.7E-13 68.9 6.6 61 52-121 65-125 (133)
86 2p9m_A Hypothetical protein MJ 98.8 1.6E-08 5.4E-13 68.4 7.3 61 51-120 70-135 (138)
87 2nyc_A Nuclear protein SNF4; b 98.8 3.1E-08 1.1E-12 67.2 8.7 66 52-120 75-140 (144)
88 3fhm_A Uncharacterized protein 98.8 6.9E-09 2.4E-13 72.7 5.3 60 51-120 90-149 (165)
89 2uv4_A 5'-AMP-activated protei 98.8 2.4E-08 8.4E-13 68.9 7.9 58 53-119 86-149 (152)
90 3kxr_A Magnesium transporter, 98.8 1.3E-08 4.6E-13 74.2 6.8 61 52-121 114-174 (205)
91 3k6e_A CBS domain protein; str 98.8 7.7E-09 2.6E-13 72.2 5.2 58 52-120 84-141 (156)
92 1o50_A CBS domain-containing p 98.8 2.3E-08 8E-13 69.3 7.6 60 51-120 93-152 (157)
93 2rc3_A CBS domain; in SITU pro 98.8 1.3E-08 4.4E-13 68.7 6.1 60 51-120 71-130 (135)
94 2o16_A Acetoin utilization pro 98.7 2.4E-08 8.1E-13 69.6 7.1 59 52-120 76-134 (160)
95 3l2b_A Probable manganase-depe 98.7 1.1E-08 3.8E-13 76.1 5.7 58 52-118 183-241 (245)
96 1y5h_A Hypothetical protein RV 98.7 2.6E-08 8.9E-13 66.9 6.8 57 52-118 72-128 (133)
97 2pfi_A Chloride channel protei 98.7 4.4E-08 1.5E-12 68.0 8.1 65 53-121 83-147 (164)
98 3lqn_A CBS domain protein; csg 98.7 2.6E-08 9E-13 68.4 6.8 59 52-121 85-143 (150)
99 3oi8_A Uncharacterized protein 98.7 2.4E-08 8.2E-13 69.4 6.6 55 52-116 101-155 (156)
100 1jcn_A Inosine monophosphate d 98.7 2.4E-10 8.1E-15 94.2 -4.5 87 70-162 117-206 (514)
101 2rih_A Conserved protein with 98.7 2.3E-08 7.9E-13 68.0 6.0 58 52-119 69-126 (141)
102 2cu0_A Inosine-5'-monophosphat 98.7 1.6E-09 5.5E-14 88.7 -0.7 80 70-162 102-181 (486)
103 3fv6_A YQZB protein; CBS domai 98.7 2.8E-08 9.7E-13 69.1 5.5 64 51-121 78-144 (159)
104 2yzi_A Hypothetical protein PH 98.7 4E-08 1.4E-12 66.4 5.8 59 52-120 70-128 (138)
105 2emq_A Hypothetical conserved 98.7 6.4E-08 2.2E-12 66.8 6.9 59 52-121 81-139 (157)
106 2j9l_A Chloride channel protei 98.6 5E-08 1.7E-12 69.1 6.5 61 52-122 106-166 (185)
107 3k2v_A Putative D-arabinose 5- 98.6 4.7E-08 1.6E-12 67.2 5.6 56 52-117 93-148 (149)
108 1pvm_A Conserved hypothetical 98.6 4.6E-08 1.6E-12 69.7 5.7 59 52-119 73-131 (184)
109 2oux_A Magnesium transporter; 98.6 8.6E-08 2.9E-12 73.3 7.4 61 52-121 199-259 (286)
110 3ctu_A CBS domain protein; str 98.6 5.8E-08 2E-12 67.1 5.7 58 53-121 85-142 (156)
111 1yav_A Hypothetical protein BS 98.6 9E-08 3.1E-12 66.4 6.6 59 52-121 84-142 (159)
112 3ocm_A Putative membrane prote 98.6 9.5E-08 3.2E-12 67.7 6.3 50 70-121 108-157 (173)
113 2yvy_A MGTE, Mg2+ transporter 98.5 7.5E-08 2.6E-12 73.2 5.3 59 53-120 198-256 (278)
114 2zy9_A Mg2+ transporter MGTE; 98.4 5E-07 1.7E-11 73.7 6.8 61 52-121 217-277 (473)
115 3usb_A Inosine-5'-monophosphat 98.3 6.5E-06 2.2E-10 67.8 12.1 61 52-120 173-233 (511)
116 2d4z_A Chloride channel protei 98.3 6.6E-07 2.3E-11 67.2 5.1 48 70-120 198-245 (250)
117 1me8_A Inosine-5'-monophosphat 98.2 5.3E-07 1.8E-11 74.1 3.4 61 53-120 160-220 (503)
118 3org_A CMCLC; transporter, tra 98.0 2.2E-06 7.4E-11 72.3 3.5 53 55-117 569-621 (632)
119 1zfj_A Inosine monophosphate d 97.9 1.3E-05 4.4E-10 65.5 6.2 60 53-120 151-210 (491)
120 3pc3_A CG1753, isoform A; CBS, 97.9 9.7E-06 3.3E-10 66.9 4.9 59 52-121 449-511 (527)
121 4fxs_A Inosine-5'-monophosphat 97.8 4.6E-06 1.6E-10 68.4 1.6 60 52-118 147-206 (496)
122 4avf_A Inosine-5'-monophosphat 97.8 2.6E-06 9E-11 69.8 0.0 61 52-119 145-205 (490)
123 4af0_A Inosine-5'-monophosphat 97.8 3.5E-06 1.2E-10 69.1 0.0 58 53-119 199-256 (556)
124 1vrd_A Inosine-5'-monophosphat 97.8 3.7E-06 1.3E-10 68.9 0.1 61 53-120 154-214 (494)
125 2cu0_A Inosine-5'-monophosphat 97.7 5.3E-06 1.8E-10 67.9 0.0 57 53-118 149-205 (486)
126 1jcn_A Inosine monophosphate d 97.3 9.3E-06 3.2E-10 66.8 -3.5 59 53-118 172-230 (514)
127 3ghd_A A cystathionine beta-sy 91.4 0.23 7.8E-06 29.2 3.6 23 141-163 2-24 (70)
128 3fio_A A cystathionine beta-sy 84.6 1.2 4E-05 25.2 3.6 22 141-162 2-23 (70)
129 1xn7_A Hypothetical protein YH 82.5 0.55 1.9E-05 28.4 1.5 34 2-35 5-38 (78)
130 2k02_A Ferrous iron transport 82.0 0.45 1.5E-05 29.5 1.0 35 1-35 4-38 (87)
131 1tif_A IF3-N, translation init 68.8 15 0.00051 22.0 5.2 29 91-121 12-40 (78)
132 2htj_A P fimbrial regulatory p 55.2 6.2 0.00021 23.2 1.8 32 3-34 4-35 (81)
133 2heo_A Z-DNA binding protein 1 52.2 6 0.0002 22.7 1.3 32 3-34 14-46 (67)
134 1qbj_A Protein (double-strande 51.4 6.3 0.00022 23.7 1.4 33 2-34 13-48 (81)
135 2jt1_A PEFI protein; solution 49.2 5.1 0.00018 23.9 0.7 33 2-34 7-45 (77)
136 1qgp_A Protein (double strande 49.1 5.3 0.00018 23.7 0.8 32 2-33 17-51 (77)
137 1svj_A Potassium-transporting 46.1 14 0.00046 25.1 2.6 34 79-115 120-153 (156)
138 1xmk_A Double-stranded RNA-spe 46.0 7.6 0.00026 23.3 1.1 32 3-34 15-47 (79)
139 3k2t_A LMO2511 protein; lister 44.9 39 0.0013 18.8 3.9 35 76-112 11-45 (57)
140 1p0z_A Sensor kinase CITA; tra 43.6 20 0.00069 23.0 3.1 18 94-113 105-122 (131)
141 3by8_A Sensor protein DCUS; hi 43.2 20 0.0007 23.4 3.1 20 94-115 110-129 (142)
142 1vd2_A Protein kinase C, IOTA 42.0 21 0.0007 22.0 2.7 29 69-97 56-84 (89)
143 3ka5_A Ribosome-associated pro 41.9 46 0.0016 19.1 4.0 36 76-113 11-46 (65)
144 3bd1_A CRO protein; transcript 40.7 15 0.00052 21.2 1.9 32 1-34 1-32 (79)
145 4a0z_A Transcription factor FA 39.3 14 0.00047 26.0 1.8 33 2-34 15-47 (190)
146 1oyi_A Double-stranded RNA-bin 38.5 9.1 0.00031 23.2 0.6 31 3-34 21-51 (82)
147 2p5k_A Arginine repressor; DNA 37.9 18 0.0006 19.8 1.8 32 4-35 10-46 (64)
148 2qkp_A Uncharacterized protein 35.4 22 0.00075 23.5 2.3 18 92-111 108-125 (151)
149 3lyv_A Ribosome-associated fac 33.1 47 0.0016 19.1 3.1 36 76-113 12-47 (66)
150 3tjo_A Serine protease HTRA1; 32.0 30 0.001 24.7 2.7 20 91-112 187-206 (231)
151 3i4p_A Transcriptional regulat 31.9 23 0.00078 23.8 1.9 33 2-34 6-38 (162)
152 2w5e_A Putative serine proteas 30.4 33 0.0011 23.3 2.5 23 88-112 122-144 (163)
153 3lgi_A Protease DEGS; stress-s 29.4 32 0.0011 24.6 2.5 22 89-112 172-193 (237)
154 3b73_A PHIH1 repressor-like pr 28.1 18 0.00062 23.0 0.8 30 3-32 17-48 (111)
155 3fan_A Non-structural protein; 28.1 30 0.001 24.9 2.0 25 89-115 123-147 (213)
156 3k6y_A Serine protease, possib 27.7 39 0.0013 24.0 2.7 22 90-113 180-201 (237)
157 2as9_A Serine protease; trypsi 27.6 37 0.0013 23.6 2.5 22 90-113 155-176 (210)
158 2dbb_A Putative HTH-type trans 27.4 35 0.0012 22.3 2.2 32 3-34 13-44 (151)
159 3sti_A Protease DEGQ; serine p 27.1 40 0.0014 24.4 2.7 22 90-113 184-205 (245)
160 2d4p_A Hypothetical protein TT 26.1 26 0.00089 23.4 1.3 30 79-112 23-52 (141)
161 2w7s_A Serine protease SPLA; h 26.0 45 0.0015 22.8 2.7 22 90-113 151-172 (200)
162 2cfx_A HTH-type transcriptiona 25.4 40 0.0014 21.9 2.2 32 3-34 9-40 (144)
163 2cg4_A Regulatory protein ASNC 24.5 41 0.0014 22.0 2.2 32 3-34 12-43 (152)
164 1z6r_A MLC protein; transcript 24.3 38 0.0013 26.2 2.2 31 3-33 20-50 (406)
165 2vid_A Serine protease SPLB; h 24.2 51 0.0017 22.4 2.7 21 91-113 155-175 (204)
166 2w25_A Probable transcriptiona 23.8 45 0.0015 21.8 2.2 32 3-34 11-42 (150)
167 2cyy_A Putative HTH-type trans 23.8 45 0.0015 21.8 2.2 32 3-34 11-42 (151)
168 2p5v_A Transcriptional regulat 23.3 46 0.0016 22.1 2.2 32 3-34 14-45 (162)
169 1qtf_A Exfoliative toxin B; se 23.0 53 0.0018 23.5 2.6 22 90-113 183-204 (246)
170 3r8s_H 50S ribosomal protein L 22.9 1.1E+02 0.0037 20.5 4.0 21 101-121 85-105 (149)
171 1i1g_A Transcriptional regulat 22.6 49 0.0017 21.2 2.2 32 3-34 8-39 (141)
172 4dah_A Sporulation kinase D; a 21.9 67 0.0023 21.9 2.9 16 94-111 129-144 (217)
173 2arf_A Wilson disease ATPase; 21.8 61 0.0021 21.8 2.6 31 81-114 135-165 (165)
174 1on2_A Transcriptional regulat 21.7 30 0.001 22.2 1.0 32 3-34 12-43 (142)
175 2kmv_A Copper-transporting ATP 21.6 64 0.0022 22.3 2.7 32 80-114 153-184 (185)
176 3cuo_A Uncharacterized HTH-typ 21.5 35 0.0012 20.2 1.2 29 4-32 29-57 (99)
177 2ia0_A Putative HTH-type trans 21.5 52 0.0018 22.3 2.2 32 3-34 21-52 (171)
178 2d1h_A ST1889, 109AA long hypo 21.4 37 0.0013 20.3 1.3 31 4-34 27-57 (109)
179 1z05_A Transcriptional regulat 20.7 45 0.0015 26.1 1.9 32 3-34 43-74 (429)
180 1sfx_A Conserved hypothetical 20.7 39 0.0013 20.1 1.3 30 4-33 25-54 (109)
181 1y0u_A Arsenical resistance op 20.6 51 0.0017 19.6 1.8 29 4-34 36-64 (96)
182 1agj_A Epidermolytic toxin A; 20.5 62 0.0021 22.9 2.6 22 90-113 192-213 (242)
183 1bia_A BIRA bifunctional prote 20.1 37 0.0013 25.7 1.3 32 3-34 9-40 (321)
No 1
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.65 E-value=2.5e-16 Score=110.83 Aligned_cols=100 Identities=16% Similarity=0.177 Sum_probs=86.0
Q ss_pred ccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCC---Ccccc
Q 031190 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRS---SKSTK 130 (164)
Q Consensus 54 ~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~---~~~~~ 130 (164)
.+++++|++++ ++.++.+++|+.+|+++|.+++++++||+ |++|+++|+||.+|+++.+...... ....+
T Consensus 15 ~~~~~iM~P~~-----~v~~v~~~~t~~~a~~~m~~~~~s~~pVv--d~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~ 87 (156)
T 3k6e_A 15 GQEETFLTPAK-----NLAVLIDTHNADHATLLLSQMTYTRVPVV--TDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTD 87 (156)
T ss_dssp TTGGGGEEETT-----SSCCEETTSBHHHHHHHHTTSSSSEEEEE--CC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSB
T ss_pred ccHHHhCcchh-----HeEEECCcCCHHHHHHHHHHcCCcEEEEE--cCCCcEEEEEEecchhhhhhhcccccccccccC
Confidence 47889999865 49999999999999999999999999999 7889999999999998776644321 13568
Q ss_pred cccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 131 VGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 131 v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
+.++|.+ ++.++++++++.+|+++|.++++
T Consensus 88 v~~im~~--~~~~v~~~~~l~~~~~~m~~~~~ 117 (156)
T 3k6e_A 88 IVHMTKT--DVAVVSPDFTITEVLHKLVDESF 117 (156)
T ss_dssp GGGTCBC--SCCCBCTTCCHHHHHHHTTTSSE
T ss_pred HHHhhcC--CceecccccHHHHHHHHHHHcCC
Confidence 9999999 59999999999999999988765
No 2
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.65 E-value=6e-17 Score=115.08 Aligned_cols=103 Identities=28% Similarity=0.417 Sum_probs=87.1
Q ss_pred CcccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcC------
Q 031190 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQG------ 123 (164)
Q Consensus 50 ~~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~------ 123 (164)
.+.+++|+|+|++ +++++.+++|+.+|++.|.+++++++||+ |++|+++|+||.+|+++......
T Consensus 14 ~l~~~~V~diM~~-------~v~~v~~~~tl~~a~~~m~~~~~~~~pVv--d~~g~lvGiit~~Dll~~~~~~~~~~~~~ 84 (170)
T 4esy_A 14 AIRQVPIRDILTS-------PVVTVREDDTLDAVAKTMLEHQIGCAPVV--DQNGHLVGIITESDFLRGSIPFWIYEASE 84 (170)
T ss_dssp HHHTSBGGGGCCS-------CCCCEETTSBHHHHHHHHHHTTCSEEEEE--CTTSCEEEEEEGGGGGGGTCCTTHHHHHH
T ss_pred HHcCCCHHHhcCC-------CCcEECCcCcHHHHHHHHHHcCCeEEEEE--cCCccEEEEEEHHHHHHHHhhccccchhh
Confidence 3567899999988 69999999999999999999999999999 88999999999999965321100
Q ss_pred ---------------CCCcccccccccccCCCeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 124 ---------------RSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 124 ---------------~~~~~~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
......+++++|++ ++++|++++++.+|+++|.+++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~v~~im~~--~~~tv~~~~~l~~a~~~m~~~~~~ 137 (170)
T 4esy_A 85 ILSRAIPAPEVEHLFETGRKLTASAVMTQ--PVVTAAPEDSVGSIADQMRRHGIH 137 (170)
T ss_dssp HHTTTSCHHHHHHHHHHHTTCBHHHHCBC--CSCCBCTTSBHHHHHHHHHHTTCS
T ss_pred hhhhccchhhHHhhhccccccchhhhccc--CcccCCcchhHHHHHHHHHHcCCc
Confidence 01124579999999 599999999999999999999874
No 3
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.63 E-value=1.9e-15 Score=103.30 Aligned_cols=102 Identities=27% Similarity=0.385 Sum_probs=88.0
Q ss_pred CcccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCccc
Q 031190 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129 (164)
Q Consensus 50 ~~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~ 129 (164)
.+...+++++|.+ ++.++.+++++.+|++.|.+++++++||+ |++|+++|+|+.+|+++.+...+. ....
T Consensus 3 ~l~~~~v~~im~~-------~~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~~~~-~~~~ 72 (138)
T 2yzi_A 3 MDMKAPIKVYMTK-------KLLGVKPSTSVQEASRLMMEFDVGSLVVI--NDDGNVVGFFTKSDIIRRVIVPGL-PYDI 72 (138)
T ss_dssp CCTTSBGGGTCBC-------CCCEECTTSBHHHHHHHHHHHTCSEEEEE--CTTSCEEEEEEHHHHHHHTTTTCC-CTTS
T ss_pred chhhhhHHHHhcC-------CCeEECCCCcHHHHHHHHHHcCCCEEEEE--cCCCcEEEEEeHHHHHHHHHhcCC-cccC
Confidence 4567899999987 59999999999999999999999999999 778999999999999755443332 3467
Q ss_pred ccccccccCCCeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 130 ~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
++.++|.+ +++++++++++.++++.|.+++++
T Consensus 73 ~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~ 104 (138)
T 2yzi_A 73 PVERIMTR--NLITANVNTPLGEVLRKMAEHRIK 104 (138)
T ss_dssp BGGGTCBC--SCCEEETTSBHHHHHHHHHHHTCS
T ss_pred CHHHHhhC--CCeEECCCCcHHHHHHHHHhcCCC
Confidence 89999988 589999999999999999887753
No 4
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.63 E-value=2.4e-15 Score=104.17 Aligned_cols=99 Identities=16% Similarity=0.301 Sum_probs=86.2
Q ss_pred CcccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCC-CcEEEEEehHHHHHHHHHcCCCCcc
Q 031190 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERDYLRKIIVQGRSSKS 128 (164)
Q Consensus 50 ~~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~-~~~vGivt~~dil~~~~~~~~~~~~ 128 (164)
.+...+|+++|++++ ++.++++++++.+|++.|.+++++++||+ |++ |+++|+||.+|+++.+.... .
T Consensus 19 ~l~~~~v~diM~~~~-----~~~~v~~~~~~~~a~~~m~~~~~~~~pVv--d~~~~~lvGivt~~dl~~~~~~~~----~ 87 (148)
T 3lv9_A 19 EFEEKKIREIMVPRT-----DMVCIYESDSEEKILAILKEEGVTRYPVC--RKNKDDILGFVHIRDLYNQKINEN----K 87 (148)
T ss_dssp GGGTCBGGGTSEETT-----TCCCEETTCCHHHHHHHHHHSCCSEEEEE--SSSTTSEEEEEEHHHHHHHHHHHS----C
T ss_pred ccCCCCHHHccccHH-----HeEEECCCCCHHHHHHHHHHCCCCEEEEE--cCCCCcEEEEEEHHHHHHHHhcCC----C
Confidence 357889999999743 38999999999999999999999999999 666 89999999999987655332 6
Q ss_pred cccccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 129 ~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
.++.++| + +++++++++++.++++.|.++++
T Consensus 88 ~~v~~~m-~--~~~~v~~~~~l~~~~~~m~~~~~ 118 (148)
T 3lv9_A 88 IELEEIL-R--DIIYISENLTIDKALERIRKEKL 118 (148)
T ss_dssp CCGGGTC-B--CCEEEETTSBHHHHHHHHHHHTC
T ss_pred ccHHHhc-C--CCeEECCCCCHHHHHHHHHhcCC
Confidence 7899999 5 48999999999999999988765
No 5
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.62 E-value=3.7e-15 Score=105.21 Aligned_cols=104 Identities=28% Similarity=0.417 Sum_probs=89.5
Q ss_pred cccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCcccc
Q 031190 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130 (164)
Q Consensus 51 ~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~ 130 (164)
+..++|+++|.++.+ ++.++.+++++.+|++.|.+++++++||+ |++|+++|+||.+|+++.+..........+
T Consensus 21 l~~~~v~dim~~~~~----~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~~~~~~~~~~ 94 (165)
T 3fhm_A 21 GMATFVKDLLDRKGR----DVVTVGPDVSIGEAAGTLHAHKIGAVVVT--DADGVVLGIFTERDLVKAVAGQGAASLQQS 94 (165)
T ss_dssp SSSCBHHHHHHHHCS----CCCEECTTSBHHHHHHHHHHHTCSEEEEE--CTTSCEEEEEEHHHHHHHHHHHGGGGGTSB
T ss_pred hhhcCHHHHhccCCC----CCeEECCCCCHHHHHHHHHHcCCCEEEEE--cCCCeEEEEEEHHHHHHHHHhcCCccccCC
Confidence 567899999997311 49999999999999999999999999999 788999999999999887664432235678
Q ss_pred cccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 131 VGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 131 v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
+.++|.+ +++++++++++.+++++|.++++
T Consensus 95 v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~ 124 (165)
T 3fhm_A 95 VSVAMTK--NVVRCQHNSTTDQLMEIMTGGRF 124 (165)
T ss_dssp GGGTSBS--SCCCBCTTCBHHHHHHHHHHHTC
T ss_pred HHHHhcC--CCeEECCCCcHHHHHHHHHHcCC
Confidence 9999998 58999999999999999988775
No 6
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.62 E-value=1.8e-15 Score=102.91 Aligned_cols=99 Identities=12% Similarity=0.174 Sum_probs=82.4
Q ss_pred cccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCC-CCcEEEEEehHHHHHHHHHcCCCCccccc
Q 031190 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGE-QKSVAGIITERDYLRKIIVQGRSSKSTKV 131 (164)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~-~~~~vGivt~~dil~~~~~~~~~~~~~~v 131 (164)
+++|+++|++.. ++.++++++++.+|++.|.+++++++||+ ++ +|+++|+||.+|+++.+. .+......++
T Consensus 1 ~~~v~~iM~~~~-----~~~~v~~~~~v~~a~~~m~~~~~~~~pVv--~~~~~~lvGivt~~dl~~~~~-~~~~~~~~~v 72 (130)
T 3hf7_A 1 KVSVNDIMVPRN-----EIVGIDINDDWKSIVRQLTHSPHGRIVLY--RDSLDDAISMLRVREAYRLMT-EKKEFTKEIM 72 (130)
T ss_dssp CCBHHHHSEEGG-----GCCEEETTSCHHHHHHHHHTCSSSEEEEE--SSSGGGEEEEEEHHHHHHHHT-SSSCCCHHHH
T ss_pred CcCHHHhCccHH-----HEEEEcCCCCHHHHHHHHHHCCCCeEEEE--cCCCCcEEEEEEHHHHHHHHh-ccCccchhhH
Confidence 368999997532 48999999999999999999999999999 54 589999999999977553 2222234678
Q ss_pred ccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 132 ~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
.++|++ ++++++++++.++++.|.++++
T Consensus 73 ~~~m~~---~~~v~~~~~l~~~~~~m~~~~~ 100 (130)
T 3hf7_A 73 LRAADE---IYFVPEGTPLSTQLVKFQRNKK 100 (130)
T ss_dssp HHHSBC---CCEEETTCBHHHHHHHHHHHCC
T ss_pred HHhccC---CeEeCCCCcHHHHHHHHHhcCC
Confidence 999954 8899999999999999988775
No 7
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.61 E-value=1.2e-15 Score=112.00 Aligned_cols=134 Identities=12% Similarity=0.168 Sum_probs=106.2
Q ss_pred CCCChHHHHHHhCccccccccccccccccccchhhh-hcCcccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHc
Q 031190 12 GNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARME-EHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQH 90 (164)
Q Consensus 12 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~ 90 (164)
..+..++.++.++..+......+...++......+. ...|.+.+|+++|++ +++++.+++|+.+|++.|.++
T Consensus 11 ~~m~~dd~~dll~~l~~~~~~~~l~~l~~~e~~~i~~~l~~~~~~v~~iM~~-------~~~~v~~~~tv~eal~~~~~~ 83 (205)
T 3kxr_A 11 AQLSPEDLIEWSDYLPESFTDRALAQMGERQRQRFELYDQYSENEIGRYTDH-------QMLVLSDKATVAQAQRFFRRI 83 (205)
T ss_dssp GGSCHHHHHHTTTTSCHHHHHHHHHHSCHHHHHHHHHHHHSCTTCGGGGCBC-------CCCEEETTCBHHHHHHHHHHC
T ss_pred HcCCHHHHHHHHHhCCHHHHHHHHHcCCHHHHHHHHHHhCCCcchHHhhccC-------ceEEECCCCcHHHHHHHHHhh
Confidence 456677888877765555444444444433333333 235788999999998 699999999999999999987
Q ss_pred ---CCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCcccccccccccCCCeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 91 ---NVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 91 ---~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
+++++||+ |++|+++|+||.+|++. .....+++++|++ ++++|++++++.++++.|.+++++
T Consensus 84 ~~~~~~~~~Vv--d~~~~lvGivt~~dll~-------~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~ 148 (205)
T 3kxr_A 84 ELDCNDNLFIV--DEADKYLGTVRRYDIFK-------HEPHEPLISLLSE--DSRALTANTTLLDAAEAIEHSREI 148 (205)
T ss_dssp CCTTCCEEEEE--CTTCBEEEEEEHHHHTT-------SCTTSBGGGGCCS--SCCCEETTSCHHHHHHHHHTSSCS
T ss_pred CccCeeEEEEE--cCCCeEEEEEEHHHHHh-------CCCcchHHHHhcC--CCeEECCCCCHHHHHHHHHhcCCC
Confidence 78999999 78899999999999964 1346789999988 589999999999999999998874
No 8
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.61 E-value=4e-15 Score=101.38 Aligned_cols=99 Identities=32% Similarity=0.528 Sum_probs=84.5
Q ss_pred cHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCcccccccc
Q 031190 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134 (164)
Q Consensus 55 ~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~v~~v 134 (164)
+++++|.++.. ++.++++++++.+|++.|.+++++++||+ | +|+++|+|+.+|+++.+...+......++.++
T Consensus 7 ~v~~im~~~~~----~~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~ 79 (135)
T 2rc3_A 7 TVKHLLQEKGH----TVVAIGPDDSVFNAMQKMAADNIGALLVM--K-DEKLVGILTERDFSRKSYLLDKPVKDTQVKEI 79 (135)
T ss_dssp BHHHHHHHHCC----CCCEECTTSBHHHHHHHHHHHTCSEEEEE--E-TTEEEEEEEHHHHHHHGGGSSSCGGGSBGGGT
T ss_pred eHHHHHhcCCC----CcEEECCCCcHHHHHHHHHhcCCCEEEEE--E-CCEEEEEEehHHHHHHHHHcCCCcccCCHHHh
Confidence 89999983211 59999999999999999999999999999 6 78999999999997655444333457789999
Q ss_pred cccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 135 MTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 135 m~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
|.+ ++.++++++++.++++.|.++++
T Consensus 80 m~~--~~~~v~~~~~l~~~~~~m~~~~~ 105 (135)
T 2rc3_A 80 MTR--QVAYVDLNNTNEDCMALITEMRV 105 (135)
T ss_dssp SBC--SCCCBCTTCBHHHHHHHHHHHTC
T ss_pred ccC--CCeEECCCCcHHHHHHHHHHhCC
Confidence 998 58999999999999999988765
No 9
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.60 E-value=3.5e-15 Score=101.25 Aligned_cols=97 Identities=9% Similarity=0.197 Sum_probs=82.8
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCC-CcEEEEEehHHHHHHHHHcCCCCcccc
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERDYLRKIIVQGRSSKSTK 130 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~-~~~vGivt~~dil~~~~~~~~~~~~~~ 130 (164)
.+.+|+++|++.. ++.++++++++.+|++.|.+++++++||+ |++ |+++|+||.+|+++.+. ....+
T Consensus 3 ~~~~v~diM~~~~-----~~~~v~~~~~~~~a~~~m~~~~~~~~pVv--d~~~~~~~Givt~~dl~~~~~-----~~~~~ 70 (129)
T 3jtf_A 3 AERTVADIMVPRS-----RMDLLDISQPLPQLLATIIETAHSRFPVY--EDDRDNIIGILLAKDLLRYML-----EPALD 70 (129)
T ss_dssp -CCBHHHHCEEGG-----GCCCEETTSCHHHHHHHHHHSCCSEEEEE--SSSTTCEEEEEEGGGGGGGGT-----CTTSC
T ss_pred CCCCHHHhCccHH-----HeEEECCCCCHHHHHHHHHHcCCCEEEEE--cCCCCcEEEEEEHHHHHhHhc-----cCCcC
Confidence 4679999999532 48999999999999999999999999999 664 89999999999976432 23568
Q ss_pred cccccccCCCeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 131 VGDIMTEENKLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 131 v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
++++|++ ++++++++++.+++++|.+++++
T Consensus 71 v~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~ 100 (129)
T 3jtf_A 71 IRSLVRP---AVFIPEVKRLNVLLREFRASRNH 100 (129)
T ss_dssp GGGGCBC---CCEEETTCBHHHHHHHHHTSSCC
T ss_pred HHHHhCC---CeEeCCCCcHHHHHHHHHhcCCe
Confidence 9999976 88999999999999999988763
No 10
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.59 E-value=1.5e-15 Score=103.10 Aligned_cols=99 Identities=14% Similarity=0.267 Sum_probs=82.0
Q ss_pred cccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCC-CcEEEEEehHHHHHHHHHcCCCCccc
Q 031190 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERDYLRKIIVQGRSSKST 129 (164)
Q Consensus 51 ~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~-~~~vGivt~~dil~~~~~~~~~~~~~ 129 (164)
|.+.+|+++|.+.. .+.++++++++.+|++.|.+++++++||+ |++ |+++|+||.+|+++.... + ....
T Consensus 3 l~~~~v~~iM~~~~-----~v~~v~~~~~~~~a~~~m~~~~~~~~pVv--d~~~~~~~Givt~~dl~~~~~~-~--~~~~ 72 (130)
T 3i8n_A 3 AQDVPVTQVMTPRP-----VVFRVDATMTINEFLDKHKDTPFSRPLVY--SEQKDNIIGFVHRLELFKMQQS-G--SGQK 72 (130)
T ss_dssp ----CCTTTSCCBC-----CCCEEETTSBHHHHHHHTTTCSCSCCEEE--SSSTTCEEEECCHHHHHHHHHT-T--TTTS
T ss_pred cCcCCHhhCCCcHH-----HEEEEcCCCCHHHHHHHHHhCCCCEEEEE--eCCCCcEEEEEEHHHHHHHHhc-C--CCcC
Confidence 56789999998643 37799999999999999999999999999 666 899999999999776542 2 2367
Q ss_pred ccccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 130 ~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
++.++|++ +.++++++++.++++.|.++++
T Consensus 73 ~v~~~m~~---~~~v~~~~~l~~~~~~m~~~~~ 102 (130)
T 3i8n_A 73 QLGAVMRP---IQVVLNNTALPKVFDQMMTHRL 102 (130)
T ss_dssp BHHHHSEE---CCEEETTSCHHHHHHHHHHHTC
T ss_pred CHHHHhcC---CcCcCCCCcHHHHHHHHHHcCC
Confidence 89999965 8899999999999999988765
No 11
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.59 E-value=6.5e-15 Score=104.79 Aligned_cols=99 Identities=13% Similarity=0.227 Sum_probs=82.2
Q ss_pred CcccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCC-CcEEEEEehHHHHHHHHHcCCCCcc
Q 031190 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERDYLRKIIVQGRSSKS 128 (164)
Q Consensus 50 ~~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~-~~~vGivt~~dil~~~~~~~~~~~~ 128 (164)
.+...+|+++|+++. +++++++++++.+|++.|.+++++++||+ |++ ++++|+||.+|+++.... + ..
T Consensus 38 ~l~~~~v~diM~~~~-----~~~~v~~~~~v~~a~~~m~~~~~~~~pVv--d~~~~~lvGivt~~dl~~~~~~-~---~~ 106 (172)
T 3lhh_A 38 RLDERTISSLMVPRS-----DIVFLDLNLPLDANLRTVMQSPHSRFPVC--RNNVDDMVGIISAKQLLSESIA-G---ER 106 (172)
T ss_dssp -----CTTTTSEEGG-----GCCCEETTSCHHHHHHHHHTCCCSEEEEE--SSSTTSEEEEEEHHHHHHHHHT-T---CC
T ss_pred ccCCCCHHHhCccHH-----HeEEEcCCCCHHHHHHHHHhCCCCEEEEE--eCCCCeEEEEEEHHHHHHHHhh-c---Cc
Confidence 367899999999432 48999999999999999999999999999 666 899999999999876542 2 26
Q ss_pred cccccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 129 ~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
.++.++| + +++++++++++.++++.|.++++
T Consensus 107 ~~v~~im-~--~~~~v~~~~~l~~a~~~m~~~~~ 137 (172)
T 3lhh_A 107 LELVDLV-K--NCNFVPNSLSGMELLEHFRTTGS 137 (172)
T ss_dssp CCGGGGC-B--CCEEEETTCCHHHHHHHHHHHTC
T ss_pred ccHHHHh-c--CCeEeCCCCCHHHHHHHHHHcCC
Confidence 7899999 5 49999999999999999988775
No 12
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.59 E-value=3.1e-15 Score=102.47 Aligned_cols=98 Identities=14% Similarity=0.246 Sum_probs=83.0
Q ss_pred cccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCC-CcEEEEEehHHHHHHHHHcCCCCccccc
Q 031190 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERDYLRKIIVQGRSSKSTKV 131 (164)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~-~~~vGivt~~dil~~~~~~~~~~~~~~v 131 (164)
+.+|+++|+++. ++.++.+++++.+|++.|.+++++++||+ +++ |+++|+||.+|+++.+. .. .....++
T Consensus 2 ~~~v~~iM~~~~-----~~~~v~~~~~v~~a~~~m~~~~~~~~pVv--d~~~~~~vGivt~~dl~~~~~-~~-~~~~~~v 72 (136)
T 3lfr_A 2 DLQVRDIMVPRS-----QMISIKATQTPREFLPAVIDAAHSRYPVI--GESHDDVLGVLLAKDLLPLIL-KA-DGDSDDV 72 (136)
T ss_dssp -CBHHHHSEEGG-----GCCCEETTCCHHHHHHHHHHHCCSEEEEE--SSSTTCEEEEEEGGGGGGGGG-SS-SGGGCCG
T ss_pred CCChHhccccHH-----HEEEEcCCCCHHHHHHHHHhCCCCEEEEE--cCCCCcEEEEEEHHHHHHHHH-hc-cCCCcCH
Confidence 568999998532 48999999999999999999999999999 666 79999999999976542 11 2346789
Q ss_pred ccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 132 ~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
+++|++ ++++++++++.+++++|.++++
T Consensus 73 ~~~m~~---~~~v~~~~~l~~~~~~m~~~~~ 100 (136)
T 3lfr_A 73 KKLLRP---ATFVPESKRLNVLLREFRANHN 100 (136)
T ss_dssp GGTCBC---CCEEETTCBHHHHHHHHHHHTC
T ss_pred HHHcCC---CeEECCCCcHHHHHHHHHhcCC
Confidence 999976 8899999999999999998776
No 13
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.59 E-value=2.1e-15 Score=102.02 Aligned_cols=98 Identities=12% Similarity=0.272 Sum_probs=83.0
Q ss_pred cccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCC-CcEEEEEehHHHHHHHHHcCCCCccccc
Q 031190 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERDYLRKIIVQGRSSKSTKV 131 (164)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~-~~~vGivt~~dil~~~~~~~~~~~~~~v 131 (164)
+.+|+++|.+.. ++.++.+++++.+|++.|.+++++++||+ |++ |+++|+||.+|+++.+.. .....++
T Consensus 2 ~~~v~diM~~~~-----~~~~v~~~~~~~~a~~~m~~~~~~~~pVv--d~~~~~~vGivt~~dl~~~~~~---~~~~~~v 71 (127)
T 3nqr_A 2 DQRVRDIMIPRS-----QMITLKRNQTLDECLDVIIESAHSRFPVI--SEDKDHIEGILMAKDLLPFMRS---DAEAFSM 71 (127)
T ss_dssp -CBHHHHSEEGG-----GCCCEETTCCHHHHHHHHHHHCCSEEEEE--SSSTTCEEEEEEGGGGGGGGST---TCCCCCH
T ss_pred CcCHHHhcccHH-----HeEEEcCCCCHHHHHHHHHhCCCCEEEEE--cCCCCcEEEEEEHHHHHHHHhc---cCCCCCH
Confidence 568999999622 38999999999999999999999999999 666 899999999999764321 1246789
Q ss_pred ccccccCCCeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 132 ~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
+++|++ +.++++++++.++++.|.+++++
T Consensus 72 ~~~m~~---~~~v~~~~~l~~a~~~m~~~~~~ 100 (127)
T 3nqr_A 72 DKVLRT---AVVVPESKRVDRMLKEFRSQRYH 100 (127)
T ss_dssp HHHCBC---CCEEETTCBHHHHHHHHHHTTCC
T ss_pred HHHcCC---CeEECCCCcHHHHHHHHHhcCCe
Confidence 999966 78999999999999999988763
No 14
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.59 E-value=4.4e-15 Score=104.18 Aligned_cols=103 Identities=21% Similarity=0.306 Sum_probs=87.6
Q ss_pred cCcccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCcc
Q 031190 49 HGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS 128 (164)
Q Consensus 49 ~~~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~ 128 (164)
..+..++|+++|.+ ++++.+++++.+|++.|.+++++++||+ |++|+++|+||.+|+++.+.. +.....
T Consensus 12 ~~l~~~~v~~im~~--------~~~v~~~~~~~~a~~~m~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~-~~~~~~ 80 (159)
T 3fv6_A 12 DKLKKLQVKDFQSI--------PVVIHENVSVYDAICTMFLEDVGTLFVV--DRDAVLVGVLSRKDLLRASIG-QQELTS 80 (159)
T ss_dssp HHHTTCBGGGSCBC--------CCEEETTSBHHHHHHHHHHHTCSEEEEE--CTTSCEEEEEEHHHHHHHHTS-CSCTTT
T ss_pred HHHhhCCHHHHcCC--------CEEECCCCcHHHHHHHHHHCCCCEEEEE--cCCCcEEEEEeHHHHHHHhhc-cCcccC
Confidence 34577899999986 5699999999999999999999999999 778999999999999776543 223356
Q ss_pred cccccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 129 ~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
.++.++|.+.++++++++++++.+|+++|.++++
T Consensus 81 ~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~ 114 (159)
T 3fv6_A 81 VPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQI 114 (159)
T ss_dssp CBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTC
T ss_pred cCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCC
Confidence 7999999972238899999999999999988776
No 15
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.58 E-value=9.2e-15 Score=101.42 Aligned_cols=99 Identities=23% Similarity=0.390 Sum_probs=85.4
Q ss_pred ccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCccccccc
Q 031190 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133 (164)
Q Consensus 54 ~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~v~~ 133 (164)
++|+++|.+.. ++.++.+++++.+|++.|.+++++++||+ |++|+++|+||.+|+++.+. .+......++.+
T Consensus 28 ~~v~dim~~~~-----~~~~v~~~~~~~~a~~~m~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~-~~~~~~~~~v~~ 99 (149)
T 3k2v_A 28 LRVNDIMHTGD-----EIPHVGLQATLRDALLEITRKNLGMTAIC--DDDMNIIGIFTDGDLRRVFD-TGVDMRDASIAD 99 (149)
T ss_dssp SBGGGTSBCGG-----GSCEECTTCBHHHHHHHHHHHTSSEEEEE--CTTCBEEEEEEHHHHHHHHC-SSSCCTTCBHHH
T ss_pred cCHHHHhcCCC-----CCeEECCCCcHHHHHHHHHhCCCcEEEEE--CCCCcEEEEecHHHHHHHHh-cCCCcccCcHHH
Confidence 68999998622 28999999999999999999999999999 77899999999999976543 332335678999
Q ss_pred ccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 134 IMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 134 vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
+|.+ +++++++++++.++++.|.++++
T Consensus 100 ~m~~--~~~~v~~~~~l~~a~~~m~~~~~ 126 (149)
T 3k2v_A 100 VMTR--GGIRIRPGTLAVDALNLMQSRHI 126 (149)
T ss_dssp HSEE--SCCEECTTCBHHHHHHHHHHHTC
T ss_pred HcCC--CCeEECCCCCHHHHHHHHHHcCC
Confidence 9998 58999999999999999998775
No 16
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.58 E-value=3.4e-15 Score=101.42 Aligned_cols=100 Identities=23% Similarity=0.450 Sum_probs=84.9
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCccccc
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~v 131 (164)
...+++++|.+ ++.++.+++++.+|++.|.+++++++||+ |++|+++|+|+.+|+++.+...+......++
T Consensus 6 ~~~~v~~im~~-------~~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~~~~~~~~~~v 76 (133)
T 1y5h_A 6 TMTTARDIMNA-------GVTCVGEHETLTAAAQYMREHDIGALPIC--GDDDRLHGMLTDRDIVIKGLAAGLDPNTATA 76 (133)
T ss_dssp --CCHHHHSEE-------TCCCEETTSBHHHHHHHHHHHTCSEEEEE--CGGGBEEEEEEHHHHHHTTGGGTCCTTTSBH
T ss_pred hhcCHHHHhcC-------CceEeCCCCCHHHHHHHHHHhCCCeEEEE--CCCCeEEEEEeHHHHHHHHHhcCCCccccCH
Confidence 44689999987 59999999999999999999999999999 7789999999999997444433333346789
Q ss_pred ccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 132 ~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
.++|.+ +++++++++++.++++.|.++++
T Consensus 77 ~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~ 105 (133)
T 1y5h_A 77 GELARD--SIYYVDANASIQEMLNVMEEHQV 105 (133)
T ss_dssp HHHHTT--CCCCEETTCCHHHHHHHHHHHTC
T ss_pred HHHhcC--CCEEECCCCCHHHHHHHHHHcCC
Confidence 999988 58999999999999999988775
No 17
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.58 E-value=1e-14 Score=97.51 Aligned_cols=93 Identities=26% Similarity=0.370 Sum_probs=82.5
Q ss_pred ccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCccccccc
Q 031190 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133 (164)
Q Consensus 54 ~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~v~~ 133 (164)
++|+++|.+ ++.++.+++++.+|++.|.+++++++||+ |++|+++|+|+.+|+++.+.. ...++.+
T Consensus 1 ~~v~~im~~-------~~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~G~vt~~dl~~~~~~-----~~~~v~~ 66 (122)
T 3kpb_A 1 TLVKDILSK-------PPITAHSNISIMEAAKILIKHNINHLPIV--DEHGKLVGIITSWDIAKALAQ-----NKKTIEE 66 (122)
T ss_dssp CBHHHHCCS-------CCCCEETTSBHHHHHHHHHHHTCSCEEEE--CTTSBEEEEECHHHHHHHHHT-----TCCBGGG
T ss_pred CchHHhhCC-------CCEEeCCCCcHHHHHHHHHHcCCCeEEEE--CCCCCEEEEEEHHHHHHHHHh-----cccCHHH
Confidence 478999998 59999999999999999999999999999 788999999999999776542 2348999
Q ss_pred ccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 134 IMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 134 vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
+|.+ ++.++++++++.++++.|.++++
T Consensus 67 ~~~~--~~~~v~~~~~l~~~~~~~~~~~~ 93 (122)
T 3kpb_A 67 IMTR--NVITAHEDEPVDHVAIKMSKYNI 93 (122)
T ss_dssp TSBS--SCCCEETTSBHHHHHHHHHHHTC
T ss_pred HhcC--CCeEECCCCCHHHHHHHHHHhCC
Confidence 9988 58999999999999999988765
No 18
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.58 E-value=6.1e-15 Score=102.20 Aligned_cols=103 Identities=14% Similarity=0.236 Sum_probs=86.9
Q ss_pred cccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcC----CCC
Q 031190 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQG----RSS 126 (164)
Q Consensus 51 ~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~----~~~ 126 (164)
+..++|+++|.+.+ ++.++.+++++.+|++.|.+++++++||+ |++|+++|+||.+|+++.+.... ...
T Consensus 12 l~~~~v~~im~~~~-----~~~~v~~~~~l~~a~~~~~~~~~~~~pVv--d~~~~~~Givt~~dl~~~~~~~~~~~~~~~ 84 (150)
T 3lqn_A 12 FQQIFVKDLMISSE-----KVAHVQIGNGLEHALLVLVKSGYSAIPVL--DPMYKLHGLISTAMILDGILGLERIEFERL 84 (150)
T ss_dssp HHHCBHHHHSEEGG-----GSCCBCTTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEEHHHHHHHTBCSSSBCGGGG
T ss_pred hhcCChhhcccCCC-----ceEEECCCCcHHHHHHHHHHcCCcEEEEE--CCCCCEEEEEEHHHHHHHHHhhcccchhHH
Confidence 56789999999522 48999999999999999999999999999 78899999999999977553211 012
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 127 KSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 127 ~~~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
...++.++|.+ +++++++++++.+++++|.++++
T Consensus 85 ~~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~~ 118 (150)
T 3lqn_A 85 EEMKVEQVMKQ--DIPVLKLEDSFAKALEMTIDHPF 118 (150)
T ss_dssp GGCBGGGTCBS--SCCEEETTCBHHHHHHHHHHCSE
T ss_pred hcCCHHHHhcC--CCceeCCCCCHHHHHHHHHhCCE
Confidence 45789999998 58999999999999999988764
No 19
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.58 E-value=1.2e-14 Score=97.38 Aligned_cols=96 Identities=23% Similarity=0.358 Sum_probs=83.3
Q ss_pred ccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCccccccc
Q 031190 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133 (164)
Q Consensus 54 ~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~v~~ 133 (164)
++++++|.+ ++.++.+++++.+|++.|.+++++++||+ | +|+++|+|+.+|+++.+. .+......++.+
T Consensus 1 m~v~~~m~~-------~~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d-~~~~~G~it~~dl~~~~~-~~~~~~~~~v~~ 69 (125)
T 1pbj_A 1 MRVEDVMVT-------DVDTIDITASLEDVLRNYVENAKGSSVVV--K-EGVRVGIVTTWDVLEAIA-EGDDLAEVKVWE 69 (125)
T ss_dssp -CHHHHCBC-------SCCEEETTCBHHHHHHHHHHHCCCEEEEE--E-TTEEEEEEEHHHHHHHHH-HTCCTTTSBHHH
T ss_pred CCHHHhcCC-------CceEECCCCcHHHHHHHHHHcCCCEEEEE--e-CCeeEEEEeHHHHHHHHh-cCCcccccCHHH
Confidence 478999987 59999999999999999999999999999 7 899999999999976544 332334678999
Q ss_pred ccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 134 IMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 134 vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
+|.+ ++.++++++++.++++.|.++++
T Consensus 70 ~m~~--~~~~v~~~~~l~~~~~~~~~~~~ 96 (125)
T 1pbj_A 70 VMER--DLVTISPRATIKEAAEKMVKNVV 96 (125)
T ss_dssp HCBC--GGGEECTTSCHHHHHHHHHHHTC
T ss_pred HcCC--CCeEECCCCCHHHHHHHHHhcCC
Confidence 9998 58999999999999999988765
No 20
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.58 E-value=7.4e-15 Score=102.41 Aligned_cols=101 Identities=20% Similarity=0.330 Sum_probs=86.1
Q ss_pred CcccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEE-ecCCCCcEEEEEehHHHHHHHHHcCCCCcc
Q 031190 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVV-KPGEQKSVAGIITERDYLRKIIVQGRSSKS 128 (164)
Q Consensus 50 ~~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv-~~d~~~~~vGivt~~dil~~~~~~~~~~~~ 128 (164)
.+.+.+|+++|.+++ ++.++.+++++.+|++.|.+++++++||+ + +++|+++|+||.+|+++.+... ..
T Consensus 16 ~l~~~~v~~iM~~~~-----~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d-~~~~~lvGivt~~dl~~~~~~~----~~ 85 (153)
T 3oco_A 16 EMNDKVASDVMVDRT-----SMSVVDVDETIADALLLYLEEQYSRFPVTAD-NDKDKIIGYAYNYDIVRQARID----DK 85 (153)
T ss_dssp HHHHCBHHHHSEEGG-----GCCCEETTSBHHHHHHHHHHHCCSEEEEEET-TEEEEEEEEEEHHHHHHHHHHH----TT
T ss_pred ccCCCEeeeEecchh-----heEEEcCCCCHHHHHHHHHhCCCCEEEEEEC-CCCCcEEEEEEHHHHHhHHhcC----CC
Confidence 356789999998632 38999999999999999999999999999 4 3358999999999998766533 26
Q ss_pred cccccccccCCCeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 129 ~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
.+++++| + +++++++++++.+++..|.+++++
T Consensus 86 ~~v~~~m-~--~~~~v~~~~~l~~~~~~m~~~~~~ 117 (153)
T 3oco_A 86 AKISTIM-R--DIVSVPENMKVPDVMEEMSAHRVP 117 (153)
T ss_dssp SBGGGTC-B--CCEEEETTSBHHHHHHHHHHTTCS
T ss_pred CcHHHHh-C--CCeEECCCCCHHHHHHHHHHcCCc
Confidence 7899999 5 499999999999999999988763
No 21
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.57 E-value=2.2e-14 Score=100.79 Aligned_cols=101 Identities=18% Similarity=0.223 Sum_probs=85.7
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHc-------CC
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ-------GR 124 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~-------~~ 124 (164)
..++|+++|.+ ++.++.+++++.+|+++|.+++++++||+ |++|+++|+||.+|+++.+... ..
T Consensus 3 ~~~~v~dim~~-------~~~~v~~~~tl~~a~~~m~~~~~~~~pVv--d~~~~lvGivt~~dl~~~~~~~~~~~~~~~~ 73 (160)
T 2o16_A 3 LMIKVEDMMTR-------HPHTLLRTHTLNDAKHLMEALDIRHVPIV--DANKKLLGIVSQRDLLAAQESSLQRSAQGDS 73 (160)
T ss_dssp CCCBGGGTSEE-------SCCCBCTTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEEHHHHHHHHHHHCC-------
T ss_pred CcCcHHHHhcC-------CCeEECCCCcHHHHHHHHHHcCCCEEEEE--cCCCcEEEEEeHHHHHHHHHHhhcccccccc
Confidence 35689999987 59999999999999999999999999999 7789999999999998765431 01
Q ss_pred CCcccccccccccCCCeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 125 ~~~~~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
.....++.++|.+ +++++++++++.+|+.+|.++++.
T Consensus 74 ~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~ 110 (160)
T 2o16_A 74 LAFETPLFEVMHT--DVTSVAPQAGLKESAIYMQKHKIG 110 (160)
T ss_dssp --CCCBHHHHSCS--CEEEBCTTSBHHHHHHHHHHTTCS
T ss_pred hhcccCHHHHhcC--CCeEECCCCCHHHHHHHHHHhCCC
Confidence 1246789999998 599999999999999999988753
No 22
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.56 E-value=3.1e-15 Score=104.81 Aligned_cols=100 Identities=13% Similarity=0.236 Sum_probs=85.2
Q ss_pred CcccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCC-CcEEEEEehHHHHHHHHHcCCCCcc
Q 031190 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERDYLRKIIVQGRSSKS 128 (164)
Q Consensus 50 ~~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~-~~~vGivt~~dil~~~~~~~~~~~~ 128 (164)
.+...+|+++|+++. +++++++++++.+|++.|.+++++++||+ |++ ++++|+||.+|+++.+. ....
T Consensus 34 ~l~~~~v~diM~~~~-----~~~~v~~~~~i~~a~~~m~~~~~~~~pVv--d~~~~~lvGivt~~dl~~~~~----~~~~ 102 (156)
T 3oi8_A 34 DFSDLEVRDAMITRS-----RMNVLKENDSIERITAYVIDTAHSRFPVI--GEDKDEVLGILHAKDLLKYMF----NPEQ 102 (156)
T ss_dssp HHTTCBGGGTCEEGG-----GCCCEETTCCHHHHHHHHHHHCCSEEEEE--SSSTTCEEEEEEGGGGGGGSS----CGGG
T ss_pred ccCCCCHhheeeeHH-----HeEEECCCCCHHHHHHHHHHCCCCEEEEE--cCCCCcEEEEEEHHHHHHHHH----cCCc
Confidence 467899999998632 38999999999999999999999999999 666 59999999999976431 1146
Q ss_pred cccccccccCCCeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 129 ~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
.++.++|++ ++++++++++.++++.|.+++++
T Consensus 103 ~~v~~im~~---~~~v~~~~~l~~a~~~m~~~~~~ 134 (156)
T 3oi8_A 103 FHLKSILRP---AVFVPEGKSLTALLKEFREQRNH 134 (156)
T ss_dssp CCHHHHCBC---CCEEETTSBHHHHHHHHHHTTCC
T ss_pred ccHHHHcCC---CEEECCCCCHHHHHHHHHhcCCe
Confidence 789999976 88999999999999999988763
No 23
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.56 E-value=3.2e-14 Score=97.63 Aligned_cols=97 Identities=20% Similarity=0.267 Sum_probs=83.5
Q ss_pred cccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCC--cEEEEEehHHHHHHHHHcCCCCcccc
Q 031190 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQK--SVAGIITERDYLRKIIVQGRSSKSTK 130 (164)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~--~~vGivt~~dil~~~~~~~~~~~~~~ 130 (164)
.++++++|.+ ++.++.+++++.+|++.|.+++++++||+ |+++ +++|+||.+|+++.+. .+. ....+
T Consensus 4 ~~~v~~im~~-------~~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~~~Givt~~dl~~~~~-~~~-~~~~~ 72 (141)
T 2rih_A 4 AIRTSELLKR-------PPVSLPETATIREVATELAKNRVGLAVLT--ARDNPKRPVAVVSERDILRAVA-QRL-DLDGP 72 (141)
T ss_dssp -CBGGGGCCS-------CCEEEETTCBHHHHHHHHHHHTCSEEEEE--ETTEEEEEEEEEEHHHHHHHHH-TTC-CTTSB
T ss_pred ceEHHHHhcC-------CCeEeCCCCcHHHHHHHHHHcCCCEEEEE--cCCCcceeEEEEEHHHHHHHHh-cCC-CCCCC
Confidence 4689999987 59999999999999999999999999999 6677 9999999999977654 322 24678
Q ss_pred cccccccCCCeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 131 VGDIMTEENKLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 131 v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
+.++|.+ ++.+++++ ++.+++++|.+++++
T Consensus 73 v~~~m~~--~~~~v~~~-~l~~a~~~m~~~~~~ 102 (141)
T 2rih_A 73 AMPIANS--PITVLDTD-PVHVAAEKMRRHNIR 102 (141)
T ss_dssp SGGGCBC--CCEEETTS-BHHHHHHHHHHHTCS
T ss_pred HHHHcCC--CCeEEcCC-CHHHHHHHHHHcCCe
Confidence 9999988 59999999 999999999887753
No 24
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.55 E-value=2e-14 Score=97.59 Aligned_cols=97 Identities=34% Similarity=0.520 Sum_probs=84.5
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCccccc
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~v 131 (164)
.+.+++++|.+ ++.++.+++++.+|++.|.+++++++||+ | +|+++|+|+.+|+++.+. .+. ....++
T Consensus 2 ~~~~v~~im~~-------~~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d-~~~~~Givt~~dl~~~~~-~~~-~~~~~v 69 (133)
T 2ef7_A 2 EEEIVKEYMKT-------QVISVTKDAKLNDIAKVMTEKNIGSVIVV--D-GNKPVGIITERDIVKAIG-KGK-SLETKA 69 (133)
T ss_dssp CCCBGGGTSBC-------SCCEEETTCBHHHHHHHHHHHTCSEEEEE--E-TTEEEEEEEHHHHHHHHH-TTC-CTTCBG
T ss_pred CcccHHHhccC-------CCEEECCCCcHHHHHHHHHhcCCCEEEEE--E-CCEEEEEEcHHHHHHHHh-cCC-CcccCH
Confidence 46789999987 59999999999999999999999999999 7 789999999999976554 322 246789
Q ss_pred ccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 132 ~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
.++|.+ ++.++++++++.++++.|.++++
T Consensus 70 ~~~~~~--~~~~v~~~~~l~~~~~~~~~~~~ 98 (133)
T 2ef7_A 70 EEFMTA--SLITIREDSPITGALALMRQFNI 98 (133)
T ss_dssp GGTSEE--CCCCEETTSBHHHHHHHHHHHTC
T ss_pred HHHcCC--CCEEECCCCCHHHHHHHHHHcCC
Confidence 999988 58999999999999999988775
No 25
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.55 E-value=3e-14 Score=102.28 Aligned_cols=100 Identities=20% Similarity=0.341 Sum_probs=86.2
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCccccc
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~v 131 (164)
-.++|+++|.+ +++++.+++++.+|+++|.+++++.+||+ |++|+++|+||.+|+++.+..........++
T Consensus 7 ~~~~v~~im~~-------~~~~v~~~~~l~ea~~~~~~~~~~~~pVv--d~~g~~vGivt~~dl~~~~~~~~~~~~~~~v 77 (184)
T 1pvm_A 7 MFMRVEKIMNS-------NFKTVNWNTTVFDAVKIMNENHLYGLVVK--DDNGNDVGLLSERSIIKRFIPRNKKPDEVPI 77 (184)
T ss_dssp CCCBGGGTSBT-------TCCEEETTCBHHHHHHHHHHHTCCEEEEE--CTTSCEEEEEEHHHHHHHTGGGCCCGGGSBG
T ss_pred cccCHHHhcCC-------CCeEECCCCcHHHHHHHHHHcCCCEEEEE--cCCCcEEEEEeHHHHHHHHhhcccCcccCCH
Confidence 34789999987 59999999999999999999999999999 7779999999999998755432223356789
Q ss_pred ccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 132 ~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
.++|.+ +++++++++++.+++++|.++++
T Consensus 78 ~~im~~--~~~~v~~~~~l~~a~~~m~~~~~ 106 (184)
T 1pvm_A 78 RLVMRK--PIPKVKSDYDVKDVAAYLSENGL 106 (184)
T ss_dssp GGTSBS--SCCEEETTCBHHHHHHHHHHHTC
T ss_pred HHHhCC--CCcEECCCCCHHHHHHHHHHcCC
Confidence 999998 58999999999999999988765
No 26
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.54 E-value=4.1e-14 Score=98.75 Aligned_cols=100 Identities=48% Similarity=0.703 Sum_probs=85.7
Q ss_pred ccHHHHhhhcC---CCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCcccc
Q 031190 54 TTISDILKAKG---KGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130 (164)
Q Consensus 54 ~~v~dim~~~~---~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~ 130 (164)
.+|+++|.++. . ++.++.+++++.+|++.|.+++++++||+ + +|+++|+||.+|+++.+..........+
T Consensus 7 ~~v~dim~~~~~~~~----~~~~v~~~~~~~~a~~~~~~~~~~~~~V~--~-~~~~~Givt~~dl~~~~~~~~~~~~~~~ 79 (157)
T 4fry_A 7 TTVAQILKAKPDSGR----TIYTVTKNDFVYDAIKLMAEKGIGALLVV--D-GDDIAGIVTERDYARKVVLQERSSKATR 79 (157)
T ss_dssp CBHHHHHHHSTTTTC----CCCEEETTSBHHHHHHHHHHHTCSEEEEE--S-SSSEEEEEEHHHHHHHSGGGTCCSSSCB
T ss_pred HHHHHHHhcccccCC----CCeEECCCCcHHHHHHHHHHcCCCEEEEe--e-CCEEEEEEEHHHHHHHHHhccCCccccC
Confidence 57999999741 1 47999999999999999999999999998 5 7899999999999876654443335789
Q ss_pred cccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 131 VGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 131 v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
+.++|.+ ++.++++++++.+++++|.++++
T Consensus 80 v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~ 109 (157)
T 4fry_A 80 VEEIMTA--KVRYVEPSQSTDECMALMTEHRM 109 (157)
T ss_dssp HHHHSBS--SCCCBCTTSBHHHHHHHHHHHTC
T ss_pred HHHHcCC--CCcEECCCCcHHHHHHHHHHcCC
Confidence 9999998 58999999999999999988775
No 27
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.53 E-value=3.5e-14 Score=96.85 Aligned_cols=98 Identities=23% Similarity=0.410 Sum_probs=84.6
Q ss_pred cccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHH-HHHHHHcCCCCccc
Q 031190 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY-LRKIIVQGRSSKST 129 (164)
Q Consensus 51 ~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~di-l~~~~~~~~~~~~~ 129 (164)
+.+.+++++|.+ ++.++.+++++.+|++.|.+++++++||+ |++|+++|+|+.+|+ ++.+. .+ .....
T Consensus 5 l~~~~v~~im~~-------~~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~-~~-~~~~~ 73 (138)
T 2p9m_A 5 LKNIKVKDVMTK-------NVITAKRHEGVVEAFEKMLKYKISSLPVI--DDENKVIGIVTTTDIGYNLIR-DK-YTLET 73 (138)
T ss_dssp CTTCBGGGTSBC-------SCCCEETTSBHHHHHHHHHHHTCCEEEEE--CTTCBEEEEEEHHHHHHHHTT-TC-CCSSC
T ss_pred cccCCHHHhhcC-------CceEECCCCcHHHHHHHHHHCCCcEEEEE--CCCCeEEEEEEHHHHHHHHHh-hc-ccCCc
Confidence 457899999987 59999999999999999999999999999 778999999999999 76443 22 23467
Q ss_pred ccccccccCCCeEEEcCCCCHHHHHHHHHhCC
Q 031190 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGHM 161 (164)
Q Consensus 130 ~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~ 161 (164)
++.++|.+ ++.++++++++.++++.|.+++
T Consensus 74 ~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~ 103 (138)
T 2p9m_A 74 TIGDVMTK--DVITIHEDASILEAIKKMDISG 103 (138)
T ss_dssp BHHHHSCS--SCCCEETTSBHHHHHHHHTCC-
T ss_pred CHHHHhCC--CcEEECCCCCHHHHHHHHHhcC
Confidence 89999998 5899999999999999998877
No 28
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.53 E-value=3e-14 Score=101.70 Aligned_cols=99 Identities=17% Similarity=0.253 Sum_probs=83.5
Q ss_pred CcccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCC-CcEEEEEehHHHHHHHHHcCCCCcc
Q 031190 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERDYLRKIIVQGRSSKS 128 (164)
Q Consensus 50 ~~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~-~~~vGivt~~dil~~~~~~~~~~~~ 128 (164)
.+...+|+++|++++ +++++.+++++.+|++.|.+++++++||+ |++ |+++|+||.+|++..+... ..
T Consensus 32 ~l~~~~v~diM~~~~-----~v~~v~~~~tv~ea~~~m~~~~~~~~pVv--d~~~~~lvGivt~~Dl~~~~~~~----~~ 100 (173)
T 3ocm_A 32 TLAERSIRSIMTPRT-----DVSWVNIDDDAATIRQQLTAAPHSFFPVC--RGSLDEVVGIGRAKDLVADLITE----GR 100 (173)
T ss_dssp HHTTSCSTTTSEEGG-----GCCCEETTSCHHHHHHHHHHSSCSEEEEE--SSSTTSEEEEEEHHHHHHHHHHH----SS
T ss_pred ccCCCCHHHhCCcHH-----HeEEEeCCCCHHHHHHHHHhCCCCEEEEE--eCCCCCEEEEEEHHHHHHHHhcC----Cc
Confidence 468899999997532 48999999999999999999999999999 665 8999999999998765432 24
Q ss_pred cccccccccCCCeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 129 TKVGDIMTEENKLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 129 ~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
.++. +|++ +++|++++++.+++++|.+++++
T Consensus 101 ~~v~-~~~~---~~~v~~~~~l~~al~~m~~~~~~ 131 (173)
T 3ocm_A 101 VRRN-RLRD---PIIVHESIGILRLMDTLKRSRGQ 131 (173)
T ss_dssp CCGG-GSBC---CCEECGGGCHHHHHHHHHHSTTC
T ss_pred chhH-hcCC---CeEECCCCcHHHHHHHHHHcCCe
Confidence 5677 5544 88999999999999999998763
No 29
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.52 E-value=1.1e-14 Score=98.50 Aligned_cols=97 Identities=13% Similarity=0.179 Sum_probs=83.2
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCccccc
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~v 131 (164)
.+.+++++|.+ ++.++.+++++.+|++.|.+++++++||+ |+ |+++|+||.+|+++.+. .+ .....++
T Consensus 3 ~s~~v~~~m~~-------~~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~-~~~~Givt~~dl~~~~~-~~-~~~~~~v 70 (128)
T 3gby_A 3 ASVTFSYLAET-------DYPVFTLGGSTADAARRLAASGCACAPVL--DG-ERYLGMVHLSRLLEGRK-GW-PTVKEKL 70 (128)
T ss_dssp TTCBGGGGCBC-------CSCCEETTSBHHHHHHHHHHHTCSEEEEE--ET-TEEEEEEEHHHHHTTCS-SS-CCTTCBC
T ss_pred cceEHHHhhcC-------CcceECCCCCHHHHHHHHHHCCCcEEEEE--EC-CEEEEEEEHHHHHHHHh-hC-CcccCcH
Confidence 35789999998 69999999999999999999999999999 66 99999999999976432 11 1123679
Q ss_pred ccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 132 ~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
.++|.+ ++.++++++++.++++.|.++++
T Consensus 71 ~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~ 99 (128)
T 3gby_A 71 GEELLE--TVRSYRPGEQLFDNLISVAAAKC 99 (128)
T ss_dssp CGGGCB--CCCCBCTTSBGGGSHHHHHHCSS
T ss_pred HHHccC--CCcEECCCCCHHHHHHHHHhCCC
Confidence 999998 58899999999999999998876
No 30
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.52 E-value=1.2e-14 Score=101.49 Aligned_cols=102 Identities=17% Similarity=0.174 Sum_probs=85.2
Q ss_pred cccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCC---Cc
Q 031190 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRS---SK 127 (164)
Q Consensus 51 ~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~---~~ 127 (164)
+...+++++|.+.+ ++.++.+++++.+|++.|.+++++++||+ |++|+++|+||.+|+++.+...... ..
T Consensus 12 l~~~~v~dim~p~~-----~~~~v~~~~~l~~a~~~m~~~~~~~~~Vv--d~~~~~~Giit~~dl~~~~~~~~~~~~~~~ 84 (156)
T 3ctu_A 12 FLLGQEETFLTPAK-----NLAVLIDTHNADHATLLLSQMTYTRVPVV--TDEKQFVGTIGLRDIMAYQMEHDLSQEIMA 84 (156)
T ss_dssp HHHTTGGGGEEEGG-----GCCCEETTSBHHHHHHHHTTCSSSEEEEE--CC-CBEEEEEEHHHHHHHHHHHTCCHHHHT
T ss_pred HHHHHHHHHcCccc-----CceEECCCCCHHHHHHHHHHCCCceEeEE--CCCCEEEEEEcHHHHHHHHHhccccccccc
Confidence 34568999999533 48999999999999999999999999999 7889999999999998766543211 12
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHhCC
Q 031190 128 STKVGDIMTEENKLITVSPDTKVLRAMQLMTGHM 161 (164)
Q Consensus 128 ~~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~ 161 (164)
..++.++|.+ +++++++++++.+++++|.+++
T Consensus 85 ~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~ 116 (156)
T 3ctu_A 85 DTDIVHMTKT--DVAVVSPDFTITEVLHKLVDES 116 (156)
T ss_dssp TSBGGGGCBC--SCCCBCSSCCHHHHHHHTTTSS
T ss_pred cCcHHHhccC--CceeeCCCCcHHHHHHHHHHcC
Confidence 6789999988 5899999999999999998765
No 31
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.51 E-value=4.7e-14 Score=98.76 Aligned_cols=103 Identities=11% Similarity=0.194 Sum_probs=86.0
Q ss_pred cccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCC----CC
Q 031190 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR----SS 126 (164)
Q Consensus 51 ~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~----~~ 126 (164)
+...+|+++|.++. ++.++.+++++.+|++.|.+++++++||+ |++|+++|+||.+|+++.+..... ..
T Consensus 11 l~~~~v~~im~~~~-----~~~~v~~~~~l~~a~~~m~~~~~~~~pVv--d~~~~lvGivt~~dl~~~~~~~~~~~~~~~ 83 (159)
T 1yav_A 11 LLEATVGQFMIEAD-----KVAHVQVGNNLEHALLVLTKTGYTAIPVL--DPSYRLHGLIGTNMIMNSIFGLERIEFEKL 83 (159)
T ss_dssp CTTCBHHHHSEEGG-----GSCCEETTCBHHHHHHHHHHHCCSEEEEE--CTTCBEEEEEEHHHHHHHHBCSSSBCGGGT
T ss_pred HhHhhHHHHhCCcc-----ceEEECCCCcHHHHHHHHHhCCCcEEEEE--CCCCCEEEEeEHHHHHHHhhhhcccchhhh
Confidence 46789999998622 28999999999999999999999999999 778899999999999775432110 02
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 127 KSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 127 ~~~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
...++.++|.+ ++.++.+++++.+++++|.++++
T Consensus 84 ~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~ 117 (159)
T 1yav_A 84 DQITVEEVMLT--DIPRLHINDPIMKGFGMVINNGF 117 (159)
T ss_dssp TTSBHHHHSBC--SCCEEETTSBHHHHHHHTTTCSE
T ss_pred ccCCHHHhcCC--CCceEcCCCCHHHHHHHHHhCCE
Confidence 46789999998 58999999999999999987754
No 32
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.51 E-value=2.8e-14 Score=87.28 Aligned_cols=68 Identities=31% Similarity=0.533 Sum_probs=59.1
Q ss_pred ceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCcccccccccccCCCeEE
Q 031190 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLIT 143 (164)
Q Consensus 71 ~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~v~~vm~~~~~~~~ 143 (164)
++++.+++|+.+|+++|.+++++++||+ | +|+++|+||.+|+++++..++....+.+++++|+++ +++
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~--d-~~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~--~iT 69 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVM--E-GDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKN--PVK 69 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEE--E-TTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEEC--TTC
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEE--E-CCEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCC--CeE
Confidence 7899999999999999999999999999 4 589999999999988776655555677999999994 554
No 33
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.50 E-value=5.6e-14 Score=107.84 Aligned_cols=96 Identities=21% Similarity=0.345 Sum_probs=85.5
Q ss_pred CcccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHc-----CCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCC
Q 031190 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQH-----NVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124 (164)
Q Consensus 50 ~~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~-----~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~ 124 (164)
.+...+|+++|.+ +++++.+++++.+|++.|.++ +++++||+ |++|+++|+||.+|++..
T Consensus 133 ~~~~~~v~~iM~~-------~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVv--d~~~~lvGivt~~dll~~------ 197 (286)
T 2oux_A 133 HYEDETAGAIMTT-------EFVSIVANQTVRSAMYVLKNQADMAETIYYVYVV--DQENHLVGVISLRDLIVN------ 197 (286)
T ss_dssp TSCTTBHHHHCBS-------CCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEE--CTTCBEEEEEEHHHHTTS------
T ss_pred cCChHHHHHhCCC-------CceEECCCCcHHHHHHHHHHcccCccceeEEEEE--cCCCeEEEEEEHHHHHcC------
Confidence 4678999999987 599999999999999999987 78899999 778999999999999641
Q ss_pred CCcccccccccccCCCeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 125 ~~~~~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
....++.++|.+ ++++|++++++.+++++|.+++++
T Consensus 198 -~~~~~v~~im~~--~~~~v~~~~~l~ea~~~m~~~~~~ 233 (286)
T 2oux_A 198 -DDDTLIADILNE--RVISVHVGDDQEDVAQTIRDYDFL 233 (286)
T ss_dssp -CTTSBHHHHSBS--CCCCEETTSBHHHHHHHHHHHTCS
T ss_pred -CCCCcHHHHcCC--CCeeecCCCCHHHHHHHHHHcCCc
Confidence 246789999988 589999999999999999988763
No 34
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.49 E-value=1.4e-13 Score=98.20 Aligned_cols=107 Identities=19% Similarity=0.204 Sum_probs=85.4
Q ss_pred cccccHHHHhhhcCCCCCCCceEe--cCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcC-----
Q 031190 51 FESTTISDILKAKGKGADGSWLWC--TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQG----- 123 (164)
Q Consensus 51 ~~~~~v~dim~~~~~~~~~~~~~v--~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~----- 123 (164)
+...+|+++|.+..+ .++.++ .+++++.+|++.|.+++++++||++.|++|+++|+||.+|+++.+....
T Consensus 8 ~~~~~v~dim~~~~~---~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~ 84 (185)
T 2j9l_A 8 AHKTLAMDVMKPRRN---DPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDG 84 (185)
T ss_dssp -CCCBHHHHSBSCTT---SCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSC
T ss_pred hccCcHHHHhccccc---CceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCC
Confidence 357899999987210 016788 9999999999999999999999992125789999999999987665321
Q ss_pred ------------------CCCcccccccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 124 ------------------RSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 124 ------------------~~~~~~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
......++.++|.+ ++++|++++++.+|+++|.++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~ 139 (185)
T 2j9l_A 85 VVSTSIIYFTEHSPPLPPYTPPTLKLRNILDL--SPFTVTDLTPMEIVVDIFRKLGL 139 (185)
T ss_dssp CCTTCEEECSSSCCCCCTTCCCCEECGGGEES--SCCEEETTSBHHHHHHHHHHHTC
T ss_pred ccccceeecccCCcccccccccCccHHHhhCc--CCeEeCCCCCHHHHHHHHHhCCC
Confidence 01245689999988 59999999999999999988765
No 35
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.49 E-value=5.4e-14 Score=97.97 Aligned_cols=103 Identities=17% Similarity=0.262 Sum_probs=84.2
Q ss_pred cccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcC----CCC
Q 031190 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQG----RSS 126 (164)
Q Consensus 51 ~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~----~~~ 126 (164)
+...+|+++|.+.. ++.++.+++++.+|++.|.+++++++||+ |++|+++|+||.+|+++.+.... ...
T Consensus 8 l~~~~v~~im~~~~-----~~~~v~~~~~~~~a~~~m~~~~~~~~pVv--d~~~~~~Givt~~dl~~~~~~~~~~~~~~~ 80 (157)
T 2emq_A 8 FMQMTVKPFLIPAD-----KVAHVQPGNYLDHALLVLTKTGYSAIPVL--DTSYKLHGLISMTMMMDAILGLERIEFERL 80 (157)
T ss_dssp --CCBSTTTCEEGG-----GSCCBCTTSBHHHHHHHHHHSSSSEEEEE--CTTCCEEEEEEHHHHHHHSBCSSSBCGGGG
T ss_pred HhhCcHHhhccCCc-----cceEECCCCcHHHHHHHHHHCCceEEEEE--cCCCCEEEEeeHHHHHHHHhcccccchHHh
Confidence 46789999998521 38999999999999999999999999999 77899999999999976432100 012
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 127 KSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 127 ~~~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
...++.++|.+ +++++++++++.++++.|.++++
T Consensus 81 ~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~ 114 (157)
T 2emq_A 81 ETMKVEEVMNR--NIPRLRLDDSLMKAVGLIVNHPF 114 (157)
T ss_dssp GTCBGGGTCBC--CCCEEETTSBHHHHHHHHHHSSE
T ss_pred cCCcHHHHhCC--CCceecCCCcHHHHHHHHhhCCE
Confidence 35789999998 58999999999999999988764
No 36
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.49 E-value=1.7e-13 Score=95.89 Aligned_cols=104 Identities=16% Similarity=0.209 Sum_probs=84.6
Q ss_pred cccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCC--CCcEEEEEehHHHHHHHHHcCCC---
Q 031190 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGE--QKSVAGIITERDYLRKIIVQGRS--- 125 (164)
Q Consensus 51 ~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~--~~~~vGivt~~dil~~~~~~~~~--- 125 (164)
...++|+++|.+ ++.++.+++++.+|++.|.+++++++||+ |+ +|+++|+||.+|+++.+......
T Consensus 10 ~~~~~v~dim~~-------~~~~v~~~~~~~~a~~~~~~~~~~~~pVv--d~~~~~~~~Givt~~dl~~~~~~~~~~~~~ 80 (164)
T 2pfi_A 10 SHHVRVEHFMNH-------SITTLAKDTPLEEVVKVVTSTDVTEYPLV--ESTESQILVGIVQRAQLVQALQAEPPSRAP 80 (164)
T ss_dssp CCSCBHHHHCBC-------CCCCEETTCBHHHHHHHHHTCCCSEEEEE--SCTTTCBEEEEEEHHHHHHHHHC-------
T ss_pred ccCCCHHHHcCC-------CCeEECCCCcHHHHHHHHHhCCCCceeEE--ecCCCCEEEEEEEHHHHHHHHHhhccccCC
Confidence 457899999988 59999999999999999999999999999 65 78999999999997765422110
Q ss_pred CcccccccccccC----CCeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 126 SKSTKVGDIMTEE----NKLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 126 ~~~~~v~~vm~~~----~~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
....++.++|.+. +.+.++++++++.++++.|.++++.
T Consensus 81 ~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~ 122 (164)
T 2pfi_A 81 GHQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQ 122 (164)
T ss_dssp CCCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCS
T ss_pred cccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCC
Confidence 1246789999872 0168899999999999999988763
No 37
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.48 E-value=4.5e-14 Score=100.32 Aligned_cols=102 Identities=21% Similarity=0.333 Sum_probs=83.5
Q ss_pred cccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcC---------
Q 031190 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQG--------- 123 (164)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~--------- 123 (164)
.++|+++|.++. +++++.+++++.+|+++|.+++++++||+ |++|+++|+||.+|+++.....+
T Consensus 3 ~~~v~dim~~~~-----~~~~v~~~~~l~~a~~~m~~~~~~~~pVv--d~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~ 75 (180)
T 3sl7_A 3 GYTVGDFMTPRQ-----NLHVVKPSTSVDDALELLVEKKVTGLPVI--DDNWTLVGVVSDYDLLALDSISGRSQNDTNLF 75 (180)
T ss_dssp CCBHHHHSEEGG-----GCCCBCTTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEEHHHHTCC--------------
T ss_pred ceeHHHhcCCCC-----CceeeCCCCcHHHHHHHHHHcCCCeEEEE--CCCCeEEEEEEHHHHHhhhhhccccCCccccc
Confidence 368999998732 28999999999999999999999999999 78899999999999974211000
Q ss_pred -----------------CCCcccccccccccCCCeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 124 -----------------RSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 124 -----------------~~~~~~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
......++.++|++ +++++++++++.+++++|.+++++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~ 130 (180)
T 3sl7_A 76 PDVDSTWKTFNELQKLISKTYGKVVGDLMTP--SPLVVRDSTNLEDAARLLLETKFR 130 (180)
T ss_dssp -----CCCSHHHHHHHHHTTTTCBHHHHSEE--SCCCEETTSBHHHHHHHHTTSTTC
T ss_pred ccccchhhhhHHHHHHHhccccccHHHHhCC--CceEeCCCCcHHHHHHHHHHcCCC
Confidence 01235789999998 588999999999999999988763
No 38
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.48 E-value=1.1e-13 Score=95.58 Aligned_cols=103 Identities=17% Similarity=0.245 Sum_probs=83.5
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHc---------
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ--------- 122 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~--------- 122 (164)
..++|+++|.+.. +++++.+++++.+|++.|.+++++++||+ |++|+++|+||.+|++......
T Consensus 3 ~~~~v~~im~~~~-----~~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~ 75 (152)
T 4gqw_A 3 GVYTVGEFMTKKE-----DLHVVKPTTTVDEALELLVENRITGFPVI--DEDWKLVGLVSDYDLLALDSGDSTWKTFNAV 75 (152)
T ss_dssp CCSBGGGTSEEST-----TCCCBCTTSBHHHHHHHHHHTTCSEEEEE--CTTCBEEEEEEHHHHTTCC----CCHHHHHH
T ss_pred ceEEhhhccCCCC-----CCeEECCCCcHHHHHHHHHHcCCceEEEE--eCCCeEEEEEEHHHHHHhhcccCcccchHHH
Confidence 4578999998742 28999999999999999999999999999 7789999999999996421100
Q ss_pred ---CCCCcccccccccccCCCeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 123 ---GRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 123 ---~~~~~~~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
.......++.++|.+ +++++++++++.+++++|.+++++
T Consensus 76 ~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~~~ 117 (152)
T 4gqw_A 76 QKLLSKTNGKLVGDLMTP--APLVVEEKTNLEDAAKILLETKYR 117 (152)
T ss_dssp HTC-----CCBHHHHSEE--SCCCEESSSBHHHHHHHHHHSSCC
T ss_pred HHHHHHhccccHHHhcCC--CceEECCCCcHHHHHHHHHHCCCC
Confidence 011235789999999 588999999999999999988763
No 39
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.47 E-value=1.5e-13 Score=94.14 Aligned_cols=102 Identities=19% Similarity=0.229 Sum_probs=81.2
Q ss_pred ccccHHH---HhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCcc
Q 031190 52 ESTTISD---ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS 128 (164)
Q Consensus 52 ~~~~v~d---im~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~ 128 (164)
.+.++++ +|.. ++.++.+++++.+|++.|.+++++++||+ |++|+++|+|+.+|+++.+.........
T Consensus 6 ~~~~v~~~~~~~~~-------~~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~~~~~~~~ 76 (144)
T 2nyc_A 6 LKIPIGDLNIITQD-------NMKSCQMTTPVIDVIQMLTQGRVSSVPII--DENGYLINVYEAYDVLGLIKGGIYNDLS 76 (144)
T ss_dssp GGSBGGGSSCCBCS-------SCCCBCTTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEEHHHHHHHHHTC----CC
T ss_pred hhcchhhcCCCCCC-------CceEECCCCcHHHHHHHHHHcCcceeeEE--cCCCcEEEEEcHHHHHHHhcccccccCC
Confidence 4456777 6765 59999999999999999999999999999 7789999999999997765422111236
Q ss_pred cccccccccCC----CeEEEcCCCCHHHHHHHHHhCCC
Q 031190 129 TKVGDIMTEEN----KLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 129 ~~v~~vm~~~~----~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
.++.++|.+.+ ++.++++++++.++++.|.++++
T Consensus 77 ~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~ 114 (144)
T 2nyc_A 77 LSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARV 114 (144)
T ss_dssp SBHHHHHHHCC------CEECTTSBHHHHHHHHHHHTC
T ss_pred ccHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCC
Confidence 78999997521 37899999999999999988765
No 40
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.47 E-value=1e-13 Score=114.60 Aligned_cols=99 Identities=17% Similarity=0.215 Sum_probs=87.8
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCC-CcHHHHHHHHHHcCCCeEEEEecC-CCCcEEEEEehHHHHHHHHHcCCCCccc
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPG-EQKSVAGIITERDYLRKIIVQGRSSKST 129 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~-~tl~~a~~~~~~~~~~~ipVv~~d-~~~~~vGivt~~dil~~~~~~~~~~~~~ 129 (164)
...+|+++|.+ +++++.++ +++.+|+++|.+++++++||+ | ++++++|+||.+|+++.+.... .....
T Consensus 382 ~~~~V~diM~~-------~~vtv~~~~~tv~ea~~~m~~~~~~~lpVv--d~~~g~lvGiVt~~Dll~~l~~~~-~~~~~ 451 (527)
T 3pc3_A 382 WSLAIAELELP-------APPVILKSDATVGEAIALMKKHRVDQLPVV--DQDDGSVLGVVGQETLITQIVSMN-RQQSD 451 (527)
T ss_dssp TTSBGGGGCCC-------CCSCCEETTCBHHHHHHHHHHHTCSEEEEE--CTTTCCEEEEEEHHHHHHHHHHHC-CCTTS
T ss_pred cCCcHHHhCcC-------CCeEEcCCCCcHHHHHHHHHHcCCCeEEEE--ECCCCEEEEEEEHHHHHHHHHhcc-CcCCC
Confidence 46899999987 59999999 999999999999999999999 7 6899999999999988776543 23567
Q ss_pred ccccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 130 KVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 130 ~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
+|.++|++ ++++|++++++.+++++|.++++
T Consensus 452 ~V~~im~~--~~~~v~~~~~l~~a~~~m~~~~~ 482 (527)
T 3pc3_A 452 PAIKALNK--RVIRLNESEILGKLARVLEVDPS 482 (527)
T ss_dssp BGGGGEET--TCCEEETTSBHHHHHHHHTTCSE
T ss_pred cHHHHhcC--CCeEECCCCcHHHHHHHHhhCCE
Confidence 99999998 59999999999999999988765
No 41
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.46 E-value=1.8e-13 Score=95.11 Aligned_cols=99 Identities=20% Similarity=0.217 Sum_probs=81.6
Q ss_pred cccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCcccc
Q 031190 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130 (164)
Q Consensus 51 ~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~ 130 (164)
+.+.+++++ + ++.++.+++++.+|++.|.+++++++||+ |++|+++|+||.+|+++.+..........+
T Consensus 20 l~~~~v~~~--~-------~~~~v~~~~~~~~a~~~m~~~~~~~~pVv--d~~~~~vGivt~~dl~~~~~~~~~~~~~~~ 88 (152)
T 2uv4_A 20 LEELQIGTY--A-------NIAMVRTTTPVYVALGIFVQHRVSALPVV--DEKGRVVDIYSKFDVINLAAEKTYNNLDVS 88 (152)
T ss_dssp HHHHTCSBC--S-------SCCCEETTCBHHHHHHHHHHHCCSEEEEE--CTTSBEEEEEEHHHHHHHHHCSSCCCTTSB
T ss_pred HHHccCCcc--C-------CceEeCCCCcHHHHHHHHHHcCCceEeEE--CCCCcEEEEEeHHHHHHHhcchhhhhhcch
Confidence 455666666 3 49999999999999999999999999999 778999999999999776543211123578
Q ss_pred cccccc------cCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 131 VGDIMT------EENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 131 v~~vm~------~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
+.++|. + +++++++++++.+++++|.++++
T Consensus 89 v~~~m~~~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~ 124 (152)
T 2uv4_A 89 VTKALQHRSHYFE--GVLKCYLHETLETIINRLVEAEV 124 (152)
T ss_dssp GGGGGGTCCHHHH--TCSEECTTSBHHHHHHHHHHHTC
T ss_pred HHHHHhhhhcccC--CCeEECCCCcHHHHHHHHHHcCC
Confidence 999996 5 48899999999999999988765
No 42
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.46 E-value=1.8e-13 Score=95.59 Aligned_cols=101 Identities=16% Similarity=0.236 Sum_probs=85.7
Q ss_pred cCcccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCe-EEEEecCCCCcEEEEEehHHHHHHHHHc-----
Q 031190 49 HGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGA-LVVVKPGEQKSVAGIITERDYLRKIIVQ----- 122 (164)
Q Consensus 49 ~~~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~-ipVv~~d~~~~~vGivt~~dil~~~~~~----- 122 (164)
..+...+|+++|.+ ++.++.+++++.+|++.|.++++++ +||+ |++ +++|+||.+|+++.+...
T Consensus 11 ~~~~~~~v~~im~~-------~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vv--d~~-~~vGivt~~dl~~~~~~~~~~~~ 80 (157)
T 1o50_A 11 HHMKVKDVCKLISL-------KPTVVEEDTPIEEIVDRILEDPVTRTVYVA--RDN-KLVGMIPVMHLLKVSGFHFFGFI 80 (157)
T ss_dssp TTCBHHHHTTSSCC-------CCEEECTTCBHHHHHHHHHHSTTCCEEEEE--ETT-EEEEEEEHHHHHHHHHHHHHCCC
T ss_pred hhhccccHhhcccC-------CCceECCCCCHHHHHHHHHhCCCCccEEEE--ECC-EEEEEEEHHHHHHHHhhhHHhhh
Confidence 34677899999987 5999999999999999999999999 9999 666 999999999998765321
Q ss_pred ---------CCCCcccccccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 123 ---------GRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 123 ---------~~~~~~~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
.......++.++|.+ ++++++++++.+++++|.++++
T Consensus 81 ~~~~~~~~~~~~~~~~~v~~im~~---~~~v~~~~~l~~a~~~m~~~~~ 126 (157)
T 1o50_A 81 PKEELIRSSMKRLIAKNASEIMLD---PVYVHMDTPLEEALKLMIDNNI 126 (157)
T ss_dssp C-------CCCCCSSCBHHHHCBC---CCCBCTTSBHHHHHHHHHHHTC
T ss_pred ccHHHHHHHHHHHcCCcHHHHcCC---CeEECCCCCHHHHHHHHHHCCC
Confidence 012346789999987 7899999999999999988775
No 43
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.42 E-value=2.8e-13 Score=103.40 Aligned_cols=96 Identities=20% Similarity=0.330 Sum_probs=85.0
Q ss_pred CcccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHc-----CCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCC
Q 031190 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQH-----NVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124 (164)
Q Consensus 50 ~~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~-----~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~ 124 (164)
.+...+++++|++ +++++.+++++.+|++.|.++ +++++||+ |++|+++|+||.+|++..
T Consensus 131 ~~~~~~v~~iM~~-------~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vv--d~~~~lvGivt~~dll~~------ 195 (278)
T 2yvy_A 131 RYEEDEAGGLMTP-------EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVV--DEKGRLKGVLSLRDLIVA------ 195 (278)
T ss_dssp HSCTTBGGGTCBS-------CCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEE--CTTCBEEEEEEHHHHHHS------
T ss_pred CCCcchHHhhcCC-------CceEECCCCcHHHHHHHHHHccCCccceeEEEEE--CCCCCEEEEEEHHHHhcC------
Confidence 3577899999988 599999999999999999987 78999999 778999999999999752
Q ss_pred CCcccccccccccCCCeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 125 ~~~~~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
....++.++|.+ ++++|++++++.+++++|.+++++
T Consensus 196 -~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~ 231 (278)
T 2yvy_A 196 -DPRTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFT 231 (278)
T ss_dssp -CTTCBSTTTSBS--SCCCEETTSBHHHHHHHHHHHTCS
T ss_pred -CCCCcHHHHhCC--CCeEEeCCCCHHHHHHHHHhcCCC
Confidence 246789999988 599999999999999999988763
No 44
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.41 E-value=7.3e-13 Score=99.03 Aligned_cols=59 Identities=10% Similarity=0.142 Sum_probs=54.3
Q ss_pred cccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHH
Q 031190 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (164)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~ 120 (164)
..+|+++|.+ ++.++.+++++.+|+++|.+++++++||+ |++|+++|+||..|+++.+.
T Consensus 6 ~~~v~~im~~-------~~~~v~~~~~~~~a~~~m~~~~~~~lpVv--d~~~~l~Giit~~di~~~~~ 64 (245)
T 3l2b_A 6 KLKVEDLEMD-------KIAPLAPEVSLKMAWNIMRDKNLKSIPVA--DGNNHLLGMLSTSNITATYM 64 (245)
T ss_dssp CCBGGGSCCB-------CCCCBCTTCBHHHHHHHHHHTTCSEEEEE--CTTCBEEEEEEHHHHHHHHH
T ss_pred cCcHHHhcCC-------CCcEECCCCcHHHHHHHHHHcCCCEEEEE--cCCCEEEEEEEHHHHHHHHH
Confidence 4689999987 69999999999999999999999999999 77899999999999987764
No 45
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.39 E-value=9.1e-13 Score=96.86 Aligned_cols=94 Identities=14% Similarity=0.190 Sum_probs=82.2
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCccccc
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~v 131 (164)
...+++++|.. ++.++.+++++.+|+++|.+++++++||+ |++++++|+||.+|+++. ..+.++
T Consensus 11 ~~~~~~~~~~~-------~~~~v~~~~tv~ea~~~m~~~~~~~~pVv--d~~~~l~Givt~~dl~~~-------~~~~~v 74 (213)
T 1vr9_A 11 HHMKVKKWVTQ-------DFPMVEESATVRECLHRMRQYQTNECIVK--DREGHFRGVVNKEDLLDL-------DLDSSV 74 (213)
T ss_dssp --CBGGGGCBS-------CSCEEETTCBHHHHHHHHHHTTSSEEEEE--CTTSBEEEEEEGGGGTTS-------CTTSBS
T ss_pred cccCHHHhhcC-------CCeEECCCCcHHHHHHHHHHCCCCEEEEE--cCCCEEEEEEEHHHHHhh-------cCCCcH
Confidence 34688899988 69999999999999999999999999999 778999999999999542 135689
Q ss_pred ccccccCCCeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 132 ~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
.++|++ +++++++++++.+++++|.++++.
T Consensus 75 ~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~ 104 (213)
T 1vr9_A 75 FNKVSL--PDFFVHEEDNITHALLLFLEHQEP 104 (213)
T ss_dssp GGGCBC--TTCCEETTSBHHHHHHHHHHCCCS
T ss_pred HHHccC--CCEEECCCCcHHHHHHHHHHhCCC
Confidence 999998 589999999999999999998763
No 46
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.38 E-value=7.3e-14 Score=113.92 Aligned_cols=120 Identities=23% Similarity=0.307 Sum_probs=22.8
Q ss_pred cccccccccccchhhh----hcC-----cccccHHHHh---hhcCCCCCC---CceEecCCCcHHHHHHHHHHcCCCeEE
Q 031190 32 PVVSSRFESVSSARME----EHG-----FESTTISDIL---KAKGKGADG---SWLWCTTDDTVYDAVKSMTQHNVGALV 96 (164)
Q Consensus 32 ~~~~~~~~~~~~~~~~----~~~-----~~~~~v~dim---~~~~~~~~~---~~~~v~~~~tl~~a~~~~~~~~~~~ip 96 (164)
|.+++.||++++..|+ +.| .+++++.+.. ...+++++| +++++.|++|+.+|+++|.+++++.+|
T Consensus 94 PlvSA~MDTVTe~~MAIamAr~GGiGvIH~n~sie~Qa~~V~~VKr~e~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvp 173 (556)
T 4af0_A 94 PFLSSPMDTVTEDRMAIALALHGGLGIIHHNCSAEEQAAMVRRVKKYENGFITDPLCLGPDATVGDVLEIKAKFGFCGVP 173 (556)
T ss_dssp CEEECCCTTTCSHHHHHHHHHTTCEEEECCSSCHHHHHHHHHHHHHCCC-------------------------------
T ss_pred CEEecCcccccCHHHHHHHHHCCCeEEEcCCCCHHHHHHHHHHHHhcccCccCCCeEcCCCCCHHHHHHHHHHhCCCccc
Confidence 8899999999998887 332 2567665421 111223333 789999999999999999999999999
Q ss_pred EEecCC---CCcEEEEEehHHHHHHHHHcCCCCcccccccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 97 VVKPGE---QKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 97 Vv~~d~---~~~~vGivt~~dil~~~~~~~~~~~~~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
|+ ++ +++++||||.+|+ ++ ...+.+|+++|++ ++++++++.++++|.++|.++++
T Consensus 174 Vv--d~g~~~~kLvGIvT~RD~-rf------~d~~~~V~evMT~--~lvt~~~~~~leeA~~iL~~~ki 231 (556)
T 4af0_A 174 IT--ETGEPDSKLLGIVTGRDV-QF------QDAETPIKSVMTT--EVVTGSSPITLEKANSLLRETKK 231 (556)
T ss_dssp ---------------------------------------------------------------------
T ss_pred cc--cccCcCCEEEEEEecccc-cc------cccceEhhhhccc--ceEEecCCCCHHHHHHHHHHccc
Confidence 99 43 5799999999998 53 1346799999999 59999999999999999998875
No 47
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.38 E-value=2.2e-12 Score=97.43 Aligned_cols=97 Identities=18% Similarity=0.393 Sum_probs=84.8
Q ss_pred cccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCcccccc
Q 031190 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132 (164)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~v~ 132 (164)
+.+++++|.+ ++.++.+++++.+|++.|.+++++++||+ |++|+++|++|.+|+++.+... .....++.
T Consensus 83 ~~~v~~im~~-------~~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~~--~~~~~~v~ 151 (280)
T 3kh5_A 83 NEPVREIMEE-------NVITLKENADIDEAIETFLTKNVGGAPIV--NDENQLISLITERDVIRALLDK--IDENEVID 151 (280)
T ss_dssp TSBGGGTSBC-------SCCCEETTCBHHHHHHHHHHTTCSEEEEE--CTTCBEEEEEEHHHHHHHHGGG--SCTTCBSG
T ss_pred hhhHHHhcCC-------CCEEECCCCCHHHHHHHHHhCCCCEEEEE--cCCCEEEEEEEHHHHHHHHhhc--CCCCCCHH
Confidence 4689999997 59999999999999999999999999999 7889999999999998765432 22345899
Q ss_pred cccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 133 DIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 133 ~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
++|++ ++.++++++++.++++.|.++++
T Consensus 152 ~~m~~--~~~~v~~~~~l~~~~~~~~~~~~ 179 (280)
T 3kh5_A 152 DYITR--DVIVATPGERLKDVARTMVRNGF 179 (280)
T ss_dssp GGCBC--SCCCBCTTCBHHHHHHHHHHHTC
T ss_pred HHhCC--CCeEECCCCcHHHHHHHHHHcCC
Confidence 99988 58999999999999999988765
No 48
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.36 E-value=1.4e-12 Score=100.78 Aligned_cols=103 Identities=17% Similarity=0.216 Sum_probs=86.1
Q ss_pred ccccHHHH---hhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCcc
Q 031190 52 ESTTISDI---LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS 128 (164)
Q Consensus 52 ~~~~v~di---m~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~ 128 (164)
...+++++ |.+ ++.++.+++++.+|++.|.+++++++||+ |++|+++|+||.+|+++.+.........
T Consensus 185 ~~~~v~~~~~~m~~-------~~~~v~~~~~~~~~~~~m~~~~~~~~pVv--d~~~~~~Giit~~dl~~~~~~~~~~~~~ 255 (323)
T 3t4n_C 185 LKIPIGDLNIITQD-------NMKSCQMTTPVIDVIQMLTQGRVSSVPII--DENGYLINVYEAYDVLGLIKGGIYNDLS 255 (323)
T ss_dssp CCSBGGGTTCSBCT-------TCCCBCTTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEETTHHHHHHHTTHHHHTT
T ss_pred hhCcHHHcCCCCCC-------CcEEECCCCcHHHHHHHHHHcCCCEEEEE--CCCCeEEEEEeHHHHHHHHhhchhhhcc
Confidence 34588888 765 59999999999999999999999999999 7889999999999998766422111235
Q ss_pred cccccccccCC----CeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 129 TKVGDIMTEEN----KLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 129 ~~v~~vm~~~~----~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
.++.++|++.+ +++++++++++.++++.|.+++++
T Consensus 256 ~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~ 294 (323)
T 3t4n_C 256 LSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVH 294 (323)
T ss_dssp SBHHHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCC
T ss_pred CCHHHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCC
Confidence 68999999732 389999999999999999998864
No 49
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.35 E-value=8.9e-13 Score=107.73 Aligned_cols=96 Identities=20% Similarity=0.335 Sum_probs=85.0
Q ss_pred CcccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHc-----CCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCC
Q 031190 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQH-----NVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124 (164)
Q Consensus 50 ~~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~-----~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~ 124 (164)
.+.+.+++++|++ +++++.+++++.++++.|+++ +++++||+ |++++++|+||.+|++.
T Consensus 151 ~~~~~~v~~iM~~-------~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVv--d~~~~lvGiVt~~Dll~------- 214 (473)
T 2zy9_A 151 RYEEDEAGGLMTP-------EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVV--DEKGRLKGVLSLRDLIV------- 214 (473)
T ss_dssp TSCTTBSTTTCBS-------CEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEE--CTTSBEEEEEEHHHHHH-------
T ss_pred cCCCCCHHHhCCC-------CceEeCCCCcHHHHHHHHHhccCCcCceeEEEEE--CCCCcEEEEEEHHHHhc-------
Confidence 4678899999998 699999999999999999986 57999999 77899999999999975
Q ss_pred CCcccccccccccCCCeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 125 SSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 125 ~~~~~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
...+.+++++|++ +++++++++++.++++.|.+++++
T Consensus 215 ~~~~~~v~dim~~--~~~~v~~~~~l~ea~~~m~~~~~~ 251 (473)
T 2zy9_A 215 ADPRTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFT 251 (473)
T ss_dssp SCTTSBGGGTSBS--SCCCEESSSBHHHHHHHHHHHTCS
T ss_pred CCCCCcHHHHhCC--CCeEEeCCCcHHHHHHHHHhcCCc
Confidence 1246799999988 599999999999999999988763
No 50
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=99.32 E-value=3e-12 Score=77.50 Aligned_cols=65 Identities=32% Similarity=0.554 Sum_probs=55.2
Q ss_pred ceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCcccccccccccC
Q 031190 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138 (164)
Q Consensus 71 ~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~v~~vm~~~ 138 (164)
+.++.+++++.+|++.|.+++++++||+ |+ |+++|+||.+|+++.+...+......+++++|++.
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~--d~-~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~ 66 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVM--EG-DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKN 66 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEE--ET-TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEEC
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEE--EC-CEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCC
Confidence 6789999999999999999999999999 55 89999999999987654333223567899999983
No 51
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.31 E-value=2e-12 Score=106.16 Aligned_cols=117 Identities=24% Similarity=0.327 Sum_probs=86.7
Q ss_pred ccccccccccccchhhh----hc-Cc----ccccHH-------------HHhhhcCCCCCCCceEecCCCcHHHHHHHHH
Q 031190 31 RPVVSSRFESVSSARME----EH-GF----ESTTIS-------------DILKAKGKGADGSWLWCTTDDTVYDAVKSMT 88 (164)
Q Consensus 31 ~~~~~~~~~~~~~~~~~----~~-~~----~~~~v~-------------dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~ 88 (164)
.|.+++.|+++++..|+ +. ++ .+++.. ++|.. +++++++++++.+++++|.
T Consensus 44 iPivsa~MdtVTe~~ma~a~a~~GGiGvI~~n~s~e~qa~~V~~Vk~~~~~m~~-------d~v~v~~~~tv~ea~~~m~ 116 (496)
T 4fxs_A 44 IPMVSASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVKIFEAGVVT-------HPVTVRPEQTIADVMELTH 116 (496)
T ss_dssp SSEEECCCTTTCSHHHHHHHHHHTCEEEECSSSCHHHHHHHHHHHHHCCC--CB-------CCCCBCSSSBHHHHHHHHT
T ss_pred CCceecCcchhhHHHHHHHHHHcCCcceecCCCCHHHHHHHHHhcccccccccc-------CceEECCCCCHHHHHHHHH
Confidence 48889999999998886 11 11 233332 35654 6999999999999999999
Q ss_pred HcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCcccccccccc-cCCCeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 89 QHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT-EENKLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 89 ~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~v~~vm~-~~~~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
+++++++||+ |++++++|+||.+|++. . ...+.++.++|+ ++ +++++++++++.+++++|.+++++
T Consensus 117 ~~~~s~~PVv--d~~~~lvGiVt~rDL~~----~--~~~~~~v~diM~p~~-~~vtv~~~~~l~ea~~~m~~~~i~ 183 (496)
T 4fxs_A 117 YHGFAGFPVV--TENNELVGIITGRDVRF----V--TDLTKSVAAVMTPKE-RLATVKEGATGAEVQEKMHKARVE 183 (496)
T ss_dssp SSCCCEEEEE--CSSSBEEEEEEHHHHTT----C--CCTTSBGGGTSEEGG-GCCEEECC----CGGGTCC---CC
T ss_pred HcCCcEEEEE--ccCCEEEEEEEHHHHhh----c--ccCCCcHHHHhcCCC-CCEEECCCCCHHHHHHHHHHcCCC
Confidence 9999999999 77899999999999942 1 235678999999 42 389999999999999999888763
No 52
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.31 E-value=1.3e-12 Score=110.16 Aligned_cols=103 Identities=12% Similarity=0.017 Sum_probs=82.4
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHH-HcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCC-----
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMT-QHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRS----- 125 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~-~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~----- 125 (164)
.+++|+|+|++++ ++.++++++++.++.+.|. +++++.+||+ |++++++|+||.+|+++.+......
T Consensus 451 ~~~~V~diM~p~~-----~v~~v~~~~t~~e~~~~~~~~~~~~~~PVv--d~~~~lvGiVt~~DL~~~l~~~~~~~~~~~ 523 (632)
T 3org_A 451 PEMTAREIMHPIE-----GEPHLFPDSEPQHIKGILEKFPNRLVFPVI--DANGYLLGAISRKEIVDRLQHVLEDVPEPI 523 (632)
T ss_dssp TTSBHHHHCBCTT-----TSCCBCSSSCHHHHHHHHHHSTTCCEECBB--CTTCBBCCEESHHHHTTTTTTC--------
T ss_pred ccCcHHHHhhcCC-----CceEecCCCcHHHHHHHHHhcCCcceEEEE--ecCCeEEEEEEHHHHHHHHHHHhhhccccc
Confidence 5689999999432 5999999999999999999 7999999999 7789999999999997643211000
Q ss_pred -----------------------------------------CcccccccccccCCCeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 126 -----------------------------------------SKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 126 -----------------------------------------~~~~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
....++.++|++ ++++|++++++.+++++|.+++++
T Consensus 524 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~--~pitV~~~~~l~ea~~~M~~~~i~ 600 (632)
T 3org_A 524 AGHRTLVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDV--SPIVVTSYSLVRQLHFLFVMLMPS 600 (632)
T ss_dssp -----------------------------------------------CCSCCC--CCCEEETTCBHHHHHHHHHHTCCS
T ss_pred ccccceeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcC--CCceecCCCcHHHHHHHHHhcCCC
Confidence 001137889999 589999999999999999999874
No 53
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.30 E-value=2.8e-12 Score=97.97 Aligned_cols=97 Identities=24% Similarity=0.297 Sum_probs=84.6
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCccccc
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~v 131 (164)
.+.+++++|.+ ++.++.+++++.+|++.|.+++++++||+ |++|+++|+||.+|+++.+.. .....++
T Consensus 91 ~~~~v~~im~~-------~~~~v~~~~~~~~a~~~m~~~~~~~lpVv--d~~~~lvGivt~~dl~~~~~~---~~~~~~v 158 (296)
T 3ddj_A 91 STTPIIDYMTP-------NPVTVYNTSDEFTAINIMVTRNFGSLPVV--DINDKPVGIVTEREFLLLYKD---LDEIFPV 158 (296)
T ss_dssp HTSBGGGTSEE-------SCCCEETTSCHHHHHHHHHHHTCSEEEEE--CTTSCEEEEEEHHHHGGGGGG---SCCCCBH
T ss_pred hcccHHHhccC-------CCEEEcCCCCHHHHHHHHHHcCCCEEEEE--cCCCcEEEEEeHHHHHHhhhc---ccccccH
Confidence 35789999987 59999999999999999999999999999 788999999999999764422 1235689
Q ss_pred ccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 132 ~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
.++|.+ ++.++++++++.++++.|.++++
T Consensus 159 ~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~ 187 (296)
T 3ddj_A 159 KVFMST--KVQTIYKEVRLDQAVKLMLRRGF 187 (296)
T ss_dssp HHHSBC--SCCCEETTSBHHHHHHHHHHHTC
T ss_pred HHhhcC--CCeEECCCCCHHHHHHHHHHcCC
Confidence 999988 59999999999999999988765
No 54
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.30 E-value=4.6e-12 Score=95.65 Aligned_cols=89 Identities=21% Similarity=0.268 Sum_probs=75.1
Q ss_pred CceEecCCCcHHHHHHHHHHcCCCeEEEEecCC-CCcEEEEEehHHHHHHHHHc-------CCC------Cccccccccc
Q 031190 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGE-QKSVAGIITERDYLRKIIVQ-------GRS------SKSTKVGDIM 135 (164)
Q Consensus 70 ~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~-~~~~vGivt~~dil~~~~~~-------~~~------~~~~~v~~vm 135 (164)
+++++.+++|+.+|+++|.+++++++||+ |+ +|+++|++|.+|+++.+... ... ..+.+++++|
T Consensus 13 ~~~~v~~~~sl~~a~~~m~~~~~~~lpV~--d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im 90 (280)
T 3kh5_A 13 KIVTVYPTTTIRKALMTMNENKYRRLPVV--NAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLAAINEPVREIM 90 (280)
T ss_dssp CCCCBCTTSBHHHHHHHHHHHCCCEEEEE--CTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHHHTTSBGGGTS
T ss_pred CcEEECCCCcHHHHHHHHHhCCCcEeeEE--ECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhHHhhhhHHHhc
Confidence 59999999999999999999999999999 65 79999999999998754210 000 1145899999
Q ss_pred ccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 136 TEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 136 ~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
++ ++.++++++++.++++.|.++++
T Consensus 91 ~~--~~~~v~~~~~~~~a~~~~~~~~~ 115 (280)
T 3kh5_A 91 EE--NVITLKENADIDEAIETFLTKNV 115 (280)
T ss_dssp BC--SCCCEETTCBHHHHHHHHHHTTC
T ss_pred CC--CCEEECCCCCHHHHHHHHHhCCC
Confidence 98 59999999999999999998876
No 55
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.29 E-value=6.1e-12 Score=96.10 Aligned_cols=100 Identities=20% Similarity=0.200 Sum_probs=85.6
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcC-----CCC
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQG-----RSS 126 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~-----~~~ 126 (164)
...+++++|.+ ++.++.+++++.++++.|.+++++++||+ |++|+++|+||.+|+++.+.... ...
T Consensus 154 ~~~~v~~~m~~-------~~~~v~~~~~l~~~~~~m~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~~~~~~~~~~~ 224 (296)
T 3ddj_A 154 EIFPVKVFMST-------KVQTIYKEVRLDQAVKLMLRRGFRRLPVI--DDDNKVVGIVTVVNAIKQLAKAVDKLDPDYF 224 (296)
T ss_dssp CCCBHHHHSBC-------SCCCEETTSBHHHHHHHHHHHTCSEEEEE--CTTSCEEEEEEHHHHHHHHHHHHHHTCTHHH
T ss_pred ccccHHHhhcC-------CCeEECCCCCHHHHHHHHHHcCCCEEEEE--cCCCEEEEEEEHHHHHHHHHHHHhhcChhhh
Confidence 45689999986 59999999999999999999999999999 78899999999999987664210 011
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 127 KSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 127 ~~~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
...++.++|++ +++++++++++.++++.|.++++
T Consensus 225 ~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~ 258 (296)
T 3ddj_A 225 YGKVVKDVMVT--NLVTIDELASVNRAAAEMIVKRI 258 (296)
T ss_dssp HTCBHHHHSBC--CCCBCCTTSBHHHHHHHHHHHTC
T ss_pred cCcCHHHHhCC--CCeEECCCCcHHHHHHHHHHcCC
Confidence 35689999998 59999999999999999988775
No 56
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.28 E-value=1.4e-11 Score=101.47 Aligned_cols=122 Identities=26% Similarity=0.444 Sum_probs=96.0
Q ss_pred ccccccccccccchhhh----hc-Cc----ccc-------cHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCe
Q 031190 31 RPVVSSRFESVSSARME----EH-GF----EST-------TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGA 94 (164)
Q Consensus 31 ~~~~~~~~~~~~~~~~~----~~-~~----~~~-------~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ 94 (164)
.|.+++.|+++++..|+ +. ++ .++ .+.++|.... .-..+++++.+++|+.+++++|.++++++
T Consensus 68 iPivsa~MdtvTe~~lAia~a~~GgiGvIh~~~~~~~q~~~V~~V~~~~~-~m~~d~v~l~~~~tv~ea~~~m~~~~~s~ 146 (511)
T 3usb_A 68 IPLISAGMDTVTEADMAIAMARQGGLGIIHKNMSIEQQAEQVDKVKRSES-GVISDPFFLTPEHQVYDAEHLMGKYRISG 146 (511)
T ss_dssp SSEEECSCTTTCSHHHHHHHHHHTCEEEECSSSCHHHHHHHHHHHHTSSS-CSSSSCCCBCTTSBHHHHHHHHHHHCCSE
T ss_pred CCccccCchhhcHHHHHHHHHhcCCceeecccCCHHHHHHHHHHhhcccc-ccccCCEEECCCCCHHHHHHHHHHcCCcE
Confidence 37888999999998886 11 11 122 3566665421 11126889999999999999999999999
Q ss_pred EEEEecCC--CCcEEEEEehHHHHHHHHHcCCCCcccccccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 95 LVVVKPGE--QKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 95 ipVv~~d~--~~~~vGivt~~dil~~~~~~~~~~~~~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
+||+ |+ +++++|+||.+|++. . ...+.++.++|++. +++++++++++.+++++|.++++
T Consensus 147 ~pVv--d~g~~~~lvGiVt~rDl~~----~--~~~~~~V~~vM~~~-~~vtv~~~~~l~eal~~m~~~~i 207 (511)
T 3usb_A 147 VPVV--NNLDERKLVGIITNRDMRF----I--QDYSIKISDVMTKE-QLITAPVGTTLSEAEKILQKYKI 207 (511)
T ss_dssp EEEE--SCTTTCBEEEEEEHHHHTT----C--CCSSSBHHHHCCCC-CCCCEETTCCHHHHHHHHHHHTC
T ss_pred EEEE--ecCCCCEEEEEEEehHhhh----h--ccCCCcHHHhcccC-CCEEECCCCCHHHHHHHHHHcCC
Confidence 9999 66 789999999999943 1 23578999999962 48999999999999999998876
No 57
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.28 E-value=2.4e-12 Score=97.42 Aligned_cols=91 Identities=16% Similarity=0.194 Sum_probs=63.2
Q ss_pred ccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCccccccc
Q 031190 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133 (164)
Q Consensus 54 ~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~v~~ 133 (164)
++|+++|.+ ++.++++++++.+|+++|.+++++++||+ |++|+++|+|+.+|++..+ .+.++++
T Consensus 1 m~v~~im~~-------~~~~v~~~~~~~~a~~~~~~~~~~~~pV~--d~~~~~~Giv~~~dl~~~~-------~~~~v~~ 64 (282)
T 2yzq_A 1 MRVKTIMTQ-------NPVTITLPATRNYALELFKKYKVRSFPVV--NKEGKLVGIISVKRILVNP-------DEEQLAM 64 (282)
T ss_dssp CBHHHHSEE-------SCCCEESSCC------------CCEEEEE--CTTCCEEEEEESSCC-----------------C
T ss_pred CchHHhccC-------CCeEECCCCcHHHHHHHHHHcCCCeEEEE--cCCCcEEEEEEHHHHHhhh-------ccCCHHH
Confidence 478999987 59999999999999999999999999999 7789999999999997532 3568999
Q ss_pred ccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 134 IMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 134 vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
+|.+ +++++++++++.++++.|.++++
T Consensus 65 ~m~~--~~~~v~~~~~l~~a~~~m~~~~~ 91 (282)
T 2yzq_A 65 LVKR--DVPVVKENDTLKKAAKLMLEYDY 91 (282)
T ss_dssp CCBS--CCCEEETTSBHHHHHHHHHHHTC
T ss_pred HcCC--CCcEECCCCcHHHHHHHHHHcCC
Confidence 9998 48899999999999999988765
No 58
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.26 E-value=1.3e-11 Score=93.37 Aligned_cols=100 Identities=18% Similarity=0.203 Sum_probs=79.9
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCccccc
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~v 131 (164)
.+.+++++|.+ ++.++.+++++.+|++.|.+++.+.+||+ |++|+++|+||.+|+++.....+......++
T Consensus 58 ~~~~v~~~m~~-------~~~~v~~~~~l~~a~~~m~~~~~~~~~Vv--d~~~~~~Giit~~di~~~~~~~~~~~~~~~v 128 (282)
T 2yzq_A 58 DEEQLAMLVKR-------DVPVVKENDTLKKAAKLMLEYDYRRVVVV--DSKGKPVGILTVGDIIRRYFAKSEKYKGVEI 128 (282)
T ss_dssp ------CCCBS-------CCCEEETTSBHHHHHHHHHHHTCSEEEEE--CTTSCEEEEEEHHHHHHHTTTTCSGGGGCBS
T ss_pred ccCCHHHHcCC-------CCcEECCCCcHHHHHHHHHHcCCCEEEEE--cCCCEEEEEEEHHHHHHHHHhccCCcccCcH
Confidence 35688899987 58999999999999999999999999999 7779999999999997723222112235688
Q ss_pred ccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 132 GDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 132 ~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
.++|.+ +++++++++++.++++.|.++++
T Consensus 129 ~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~ 157 (282)
T 2yzq_A 129 EPYYQR--YVSIVWEGTPLKAALKALLLSNS 157 (282)
T ss_dssp TTTSBS--CCCCEETTSBHHHHHHHHHTCSS
T ss_pred HHHhCC--CCEEECCCCCHHHHHHHHHHcCC
Confidence 999987 58999999999999999998775
No 59
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.25 E-value=1.9e-11 Score=94.84 Aligned_cols=102 Identities=13% Similarity=0.228 Sum_probs=83.3
Q ss_pred cccHHHH---hhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCccc
Q 031190 53 STTISDI---LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129 (164)
Q Consensus 53 ~~~v~di---m~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~ 129 (164)
..+++++ |.. ++.++.+++++.+|++.|.+++++++||+ |++|+++|+||.+|+++.+..........
T Consensus 181 ~~~v~~l~~~m~~-------~~~~v~~~~~~~~~~~~m~~~~~~~~~Vv--d~~~~~~Giit~~dl~~~~~~~~~~~~~~ 251 (334)
T 2qrd_G 181 RVPLNQMTIGTWS-------NLATASMETKVYDVIKMLAEKNISAVPIV--NSEGTLLNVYESVDVMHLIQDGDYSNLDL 251 (334)
T ss_dssp CCBGGGSSCSBCS-------SCCCBCTTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEETHHHHHHHTTSCGGGGGS
T ss_pred hCcHHHhCCcccC-------CceEECCCCcHHHHHHHHHHcCCcEEEEE--cCCCcEEEEEEHHHHHHHhhccccccccC
Confidence 3567774 665 58999999999999999999999999999 77899999999999987654221112357
Q ss_pred ccccccccC----CCeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 130 KVGDIMTEE----NKLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 130 ~v~~vm~~~----~~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
++.++|.+. .+++++++++++.++++.|.+++++
T Consensus 252 ~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~ 289 (334)
T 2qrd_G 252 SVGEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVH 289 (334)
T ss_dssp BHHHHHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCC
T ss_pred cHHHHHhcccccCCCCEEECCCCcHHHHHHHHHHcCCC
Confidence 899999840 0488999999999999999998764
No 60
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.20 E-value=3.4e-11 Score=90.74 Aligned_cols=61 Identities=13% Similarity=0.114 Sum_probs=54.2
Q ss_pred cccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCC--CCcEEEEEehHHHHHHHH
Q 031190 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGE--QKSVAGIITERDYLRKII 120 (164)
Q Consensus 51 ~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~--~~~~vGivt~~dil~~~~ 120 (164)
...++|+|+|++ +++++.+++++.+|.++|.+++++++||| |+ +++++|+|+++|+++.+.
T Consensus 10 ~~~~~v~diMt~-------~vvtv~~~~tv~~~~~lm~~~~~~~~PVV--d~~~~~~LvGiIt~~dl~~~l~ 72 (250)
T 2d4z_A 10 KYNIQVGDIMVR-------DVTSIASTSTYGDLLHVLRQTKLKFFPFV--DTPDTNTLLGSIDRTEVEGLLQ 72 (250)
T ss_dssp CSSCBTTSSSBS-------SCCCEETTCBHHHHHHHHHHCCCSEEEEE--SCTTTCBEEEEEEHHHHHHHHH
T ss_pred cCCCChHHhcCC-------CCeEECCCCCHHHHHHHHHhcCCCEEEEE--ecCCCCeEEEEEEHHHHHHHHH
Confidence 457899999998 69999999999999999999999999999 54 368999999999987543
No 61
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.13 E-value=5.5e-11 Score=92.22 Aligned_cols=105 Identities=17% Similarity=0.128 Sum_probs=79.6
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCC-CcEEEEEehHHHHHHHHHc-C--CCCc
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERDYLRKIIVQ-G--RSSK 127 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~-~~~vGivt~~dil~~~~~~-~--~~~~ 127 (164)
.+.+++++|.++. +++++++++++.+|++.|.+++++++||+ |++ ++++|+|+.+|++..+... . ....
T Consensus 20 ~~~~v~dim~~~~-----~vv~v~~~~tv~~a~~~~~~~~~~~~pV~--d~~~~~~vGiv~~~Dl~~~~~~~~~~~~~~~ 92 (334)
T 2qrd_G 20 RSRTSYDVLPTSF-----RLIVFDVTLFVKTSLSLLTLNNIVSAPLW--DSEANKFAGLLTMADFVNVIKYYYQSSSFPE 92 (334)
T ss_dssp HHSBGGGGSCSEE-----EEEEEETTSBHHHHHHHHHHHTCSCEEEE--ETTTTEEEEEECHHHHHHHHHHHHHHCSCGG
T ss_pred hcCchhhhCCCCC-----CEEEEcCCCCHHHHHHHHHHcCCeEEEEE--eCCCCeEEEEEEHHHHHHHHHHHhhccCCcc
Confidence 4589999998754 37899999999999999999999999999 444 8999999999998765321 0 0001
Q ss_pred ------cccccc-------ccccCCCeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 128 ------STKVGD-------IMTEENKLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 128 ------~~~v~~-------vm~~~~~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
..++.. +|.+...++++++++++.++++.|.+++++
T Consensus 93 ~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~ 141 (334)
T 2qrd_G 93 AIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRAR 141 (334)
T ss_dssp GGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCS
T ss_pred HHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCce
Confidence 223333 355521238999999999999999988763
No 62
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.12 E-value=2.8e-11 Score=93.85 Aligned_cols=104 Identities=14% Similarity=0.166 Sum_probs=81.5
Q ss_pred cccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCC-CcEEEEEehHHHHHHHHHcC---C--
Q 031190 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-KSVAGIITERDYLRKIIVQG---R-- 124 (164)
Q Consensus 51 ~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~-~~~vGivt~~dil~~~~~~~---~-- 124 (164)
+.+.+++++|.++. ++.++++++++.+|++.|.+++++++||+ |++ ++++|+||.+|++..+.... .
T Consensus 32 l~~~~v~dim~p~~-----~v~~v~~~~~v~~a~~~~~~~~~~~~pV~--d~~~~~~vGivt~~Dll~~l~~~~~~~~~~ 104 (330)
T 2v8q_E 32 MKSHRCYDLIPTSS-----KLVVFDTSLQVKKAFFALVTNGVRAAPLW--DSKKQSFVGMLTITDFINILHRYYKSALVQ 104 (330)
T ss_dssp HHHSBGGGGSCSEE-----EEEEEETTSBHHHHHHHHHHHTCSEEEEE--ETTTTEEEEEEEHHHHHHHHHHHHHHHTTT
T ss_pred HHcCcHhhhccCCC-----cEEEEeCCCcHHHHHHHHHHcCCcEEEEE--eCCCCeEEEEEEHHHHHHHHHHHHhccccc
Confidence 46679999995432 49999999999999999999999999999 555 78999999999987654211 0
Q ss_pred --CCccc-------ccccccccCCCeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 125 --SSKST-------KVGDIMTEENKLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 125 --~~~~~-------~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
..... ++.++|.+ +++++++++++.++++.|.+++++
T Consensus 105 ~~~l~~~~~~~~~~~~~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~ 150 (330)
T 2v8q_E 105 IYELEEHKIETWREVYLQDSFK--PLVCISPNASLFDAVSSLIRNKIH 150 (330)
T ss_dssp CCCGGGCBHHHHHHHHSSSSCC--CCCCBCTTSBHHHHHHHHHHHTCS
T ss_pred hhHHhhccHHHHHHHHhhcccC--CceEeCCCCCHHHHHHHHHHCCCC
Confidence 00011 23467887 599999999999999999887653
No 63
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.11 E-value=1.4e-10 Score=89.92 Aligned_cols=90 Identities=19% Similarity=0.190 Sum_probs=75.5
Q ss_pred CceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCcccccccccc------cCCCeEE
Q 031190 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT------EENKLIT 143 (164)
Q Consensus 70 ~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~v~~vm~------~~~~~~~ 143 (164)
++.++.+++++.++++.|.+++++++||+ |++|+++|+||.+|+++.+..........++.++|. + ++++
T Consensus 202 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vv--d~~~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~ 277 (330)
T 2v8q_E 202 NIAMVRTTTPVYVALGIFVQHRVSALPVV--DEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRSHYFE--GVLK 277 (330)
T ss_dssp SCCCEETTCBHHHHHHHHHHHCCSEEEEE--CTTSBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHGGGCCSCCC--SCCE
T ss_pred CceEECCCCCHHHHHHHHHHcCCCeEEEE--CCCCcEEEEEEHHHHHHHHhccccccccCcHHHHHhccccccC--CCeE
Confidence 58999999999999999999999999999 778999999999999765432211123568899984 4 5899
Q ss_pred EcCCCCHHHHHHHHHhCCCC
Q 031190 144 VSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 144 v~~~~~l~e~~~~m~~~~~~ 163 (164)
+++++++.++++.|.+++++
T Consensus 278 v~~~~~l~~a~~~m~~~~~~ 297 (330)
T 2v8q_E 278 CYLHETLEAIINRLVEAEVH 297 (330)
T ss_dssp ECTTSBHHHHHHHHHHHTCS
T ss_pred ECCCCcHHHHHHHHHHCCCc
Confidence 99999999999999887763
No 64
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.08 E-value=5.9e-12 Score=103.22 Aligned_cols=115 Identities=21% Similarity=0.307 Sum_probs=17.0
Q ss_pred ccccccccccccchhhh----hc-C--c--ccc-------------cHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHH
Q 031190 31 RPVVSSRFESVSSARME----EH-G--F--EST-------------TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMT 88 (164)
Q Consensus 31 ~~~~~~~~~~~~~~~~~----~~-~--~--~~~-------------~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~ 88 (164)
.|.+++.|+++++..|+ +. + + .++ +++++|.. ++.++++++++.+++++|.
T Consensus 43 iPivsa~M~tVTe~~lA~ala~~GGiGvI~~~~~~e~~a~~v~~vk~~~~~m~~-------~~v~v~~~~tv~ea~~~m~ 115 (490)
T 4avf_A 43 IPLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMGIEQQAAEVRKVKKHETAIVR-------DPVTVTPSTKIIELLQMAR 115 (490)
T ss_dssp SSEEECSCTTTCSHHHHHHHHHHTSEEEECCSSCHHHHHHHHHHHHHCCC------------------------------
T ss_pred CCccccchhhhCHHHHHHHHHHcCCCccccCCCCHHHHHHHhhhhcccccCccc-------CceEeCCCCcHHHHHHHHH
Confidence 48888999999988876 11 1 1 222 22344554 6899999999999999999
Q ss_pred HcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCcccccccccc-cCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 89 QHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT-EENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 89 ~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~v~~vm~-~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
+++++++||+ | +++++|+||.+|+.. . ...+.++.++|+ ++ +++++++++++.+++++|.++++
T Consensus 116 ~~~~s~~pVv--d-~g~lvGIVt~rDl~~-~-----~~~~~~V~~vMtp~~-~~vtv~~~~~l~ea~~~m~~~~i 180 (490)
T 4avf_A 116 EYGFSGFPVV--E-QGELVGIVTGRDLRV-K-----PNAGDTVAAIMTPKD-KLVTAREGTPLEEMKAKLYENRI 180 (490)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred HhCCCEEEEE--E-CCEEEEEEEhHHhhh-c-----cccCCcHHHHhccCC-CCEEECCCCcHHHHHHHHHHcCC
Confidence 9999999999 7 789999999999842 1 234678999999 32 38999999999999999998875
No 65
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.07 E-value=2.6e-10 Score=88.02 Aligned_cols=89 Identities=13% Similarity=0.269 Sum_probs=74.8
Q ss_pred CceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCc-----EEEEEehHHHHHHHHHcC--CCCcccccccc---cccCC
Q 031190 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKS-----VAGIITERDYLRKIIVQG--RSSKSTKVGDI---MTEEN 139 (164)
Q Consensus 70 ~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~-----~vGivt~~dil~~~~~~~--~~~~~~~v~~v---m~~~~ 139 (164)
+++++.+++++.+|++.|.+++++++||+ |+++. ++|+||.+|+++.+.... ......++.++ |.+
T Consensus 123 ~~v~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~~~~~~~~l~Givt~~di~~~l~~~~~~~~~~~~~v~~~~~~m~~-- 198 (323)
T 3t4n_C 123 DTASIHPSRPLFEACLKMLESRSGRIPLI--DQDEETHREIVVSVLTQYRILKFVALNCRETHFLKIPIGDLNIITQD-- 198 (323)
T ss_dssp -CCCBCTTSBHHHHHHHHHHHTCSEEEEE--EECTTTCCEEEEEEEEHHHHHHHHHHHCGGGGGCCSBGGGTTCSBCT--
T ss_pred CceEeCCCCcHHHHHHHHHhCCeeEEEEE--ecCCCCCccceEEEecHHHHHHHHHhcCCchhhhhCcHHHcCCCCCC--
Confidence 58999999999999999999999999999 55554 999999999988765332 11235689999 877
Q ss_pred CeEEEcCCCCHHHHHHHHHhCCC
Q 031190 140 KLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 140 ~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
+++++++++++.++++.|.++++
T Consensus 199 ~~~~v~~~~~~~~~~~~m~~~~~ 221 (323)
T 3t4n_C 199 NMKSCQMTTPVIDVIQMLTQGRV 221 (323)
T ss_dssp TCCCBCTTSBHHHHHHHHHHHTC
T ss_pred CcEEECCCCcHHHHHHHHHHcCC
Confidence 59999999999999999988765
No 66
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.06 E-value=7.7e-12 Score=102.90 Aligned_cols=119 Identities=29% Similarity=0.355 Sum_probs=15.9
Q ss_pred cccccccccccccchhhh----hcC-c----ccccH------------HHH-hhhcCCCCCCCceEecCCCcHHHHHHHH
Q 031190 30 LRPVVSSRFESVSSARME----EHG-F----ESTTI------------SDI-LKAKGKGADGSWLWCTTDDTVYDAVKSM 87 (164)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~----~~~-~----~~~~v------------~di-m~~~~~~~~~~~~~v~~~~tl~~a~~~~ 87 (164)
..|.+++.++++++..++ ..+ + .+++. .++ |.+ +++++++++|+.+++++|
T Consensus 51 ~iP~vsa~m~~vt~~~la~~la~~gg~G~I~~~~~~e~~~~~v~~V~~~e~gM~~-------~~~~v~~~~tv~eal~~m 123 (503)
T 1me8_A 51 KIPLVSAIMQSVSGEKMAIALAREGGISFIFGSQSIESQAAMVHAVKNFKAGFVV-------SDSNVKPDQTFADVLAIS 123 (503)
T ss_dssp SSSEEECSCTTTCSHHHHHHHHHTTCEEEECCSSCHHHHHHHHHHHHTTTC-----------------------------
T ss_pred cCceEeccchhhhHHHHHHHHHhCCCcceeeCCCCHHHHHHHHhhhhhcccCccc-------CCeEECCCCcHHHHHHHH
Confidence 447888888888776664 221 1 12221 222 666 599999999999999999
Q ss_pred HHcCCCeEEEEecCCC---CcEEEEEehHHHHHHHHHcCCCCcccccccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 88 TQHNVGALVVVKPGEQ---KSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 88 ~~~~~~~ipVv~~d~~---~~~vGivt~~dil~~~~~~~~~~~~~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
.+++++++||+ |++ ++++|+||.+|++.. . ...+.+++++|++..+++++++++++.+++++|.++++
T Consensus 124 ~~~~~s~~pVv--d~~~~~g~lvGiVt~~Dl~~~---~--~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i 194 (503)
T 1me8_A 124 QRTTHNTVAVT--DDGTPHGVLLGLVTQRDYPID---L--TQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKL 194 (503)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred HHcCceEEEEE--ECCCcCCeEEEEEEHHHHHhh---h--ccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCC
Confidence 99999999999 665 899999999999642 1 23467899999983238999999999999999988775
No 67
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.04 E-value=6.1e-10 Score=91.21 Aligned_cols=92 Identities=22% Similarity=0.296 Sum_probs=79.1
Q ss_pred HHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecC--CCCcEEEEEehHHHHHHHHHcCCCCccccccc
Q 031190 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPG--EQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133 (164)
Q Consensus 56 v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d--~~~~~vGivt~~dil~~~~~~~~~~~~~~v~~ 133 (164)
+.++|.+ ++.++.+++++.++++.|.+++++.+||+ | ++++++|+||.+|++.. ...+.++.+
T Consensus 92 ~~~im~~-------~~~~v~~~~tv~ea~~~m~~~~~~~~pVv--d~~~~~~lvGivt~~Dl~~~------~~~~~~v~~ 156 (491)
T 1zfj_A 92 SENGVII-------DPFFLTPEHKVSEAEELMQRYRISGVPIV--ETLANRKLVGIITNRDMRFI------SDYNAPISE 156 (491)
T ss_dssp HTTTTSS-------SCCCBCSSSBHHHHHHHHHHTTCSEEEEE--SCTTTCBEEEEEEHHHHHHC------SCSSSBTTT
T ss_pred HHhcCcC-------CCeEECCCCcHHHHHHHHHHcCCCEEEEE--EeCCCCEEEEEEEHHHHhhh------ccCCCcHHH
Confidence 4566766 69999999999999999999999999999 7 78999999999999642 124678999
Q ss_pred ccccCCCeEEEcCCCCHHHHHHHHHhCCCC
Q 031190 134 IMTEENKLITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 134 vm~~~~~~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
+|+++ +++++++++++.+++++|.+++++
T Consensus 157 im~~~-~~~~v~~~~~l~~a~~~m~~~~~~ 185 (491)
T 1zfj_A 157 HMTSE-HLVTAAVGTDLETAERILHEHRIE 185 (491)
T ss_dssp SCCCS-CCCCEETTCCHHHHHHHHHHTTCS
T ss_pred HcCCC-CCEEECCCCCHHHHHHHHHHcCCC
Confidence 99962 288999999999999999998753
No 68
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.02 E-value=5.2e-10 Score=82.05 Aligned_cols=94 Identities=12% Similarity=0.165 Sum_probs=54.9
Q ss_pred cccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCcccccc
Q 031190 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132 (164)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~v~ 132 (164)
+.+++++|.+ ++.++.+++++.+|+++|.+++++.+||+ |++|+++|+||.+|+++.+.... .+.
T Consensus 71 ~~~v~~im~~-------~~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~lvGiit~~Dil~~~~~~~------~~~ 135 (213)
T 1vr9_A 71 DSSVFNKVSL-------PDFFVHEEDNITHALLLFLEHQEPYLPVV--DEEMRLKGAVSLHDFLEALIEAL------AMD 135 (213)
T ss_dssp TSBSGGGCBC-------TTCCEETTSBHHHHHHHHHHCCCSEEEEE--CTTCBEEEEEEHHHHHHHHHHSC------C--
T ss_pred CCcHHHHccC-------CCEEECCCCcHHHHHHHHHHhCCCEEEEE--cCCCEEEEEEEHHHHHHHHHHHh------cCC
Confidence 4579999987 59999999999999999999999999999 77799999999999988665321 122
Q ss_pred cccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 133 DIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 133 ~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
+.+... .+.+.....++.++.++|.++++
T Consensus 136 ~~~~~l-~~~~~~~~~~l~~~~~~l~~~~~ 164 (213)
T 1vr9_A 136 VPGIRF-SVLLEDKPGELRKVVDALALSNI 164 (213)
T ss_dssp ------------------------------
T ss_pred CCcEEE-EEEeCCCCccHHHHHHHHHHCCC
Confidence 333331 01111344458888888887764
No 69
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.95 E-value=6.6e-11 Score=97.08 Aligned_cols=117 Identities=28% Similarity=0.440 Sum_probs=13.5
Q ss_pred ccccccccccccchhhh----hcC-c----ccc-------------cHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHH
Q 031190 31 RPVVSSRFESVSSARME----EHG-F----EST-------------TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMT 88 (164)
Q Consensus 31 ~~~~~~~~~~~~~~~~~----~~~-~----~~~-------------~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~ 88 (164)
.|.+++.++.++...++ ..+ + .+. ++.++|.+ +++++.+++++.+|++.|.
T Consensus 50 iP~is~~m~~v~~~~lA~al~~~GglG~i~~~~~~e~~~~~v~~v~~~~~iM~~-------~~~~v~~~~tv~ea~~~m~ 122 (494)
T 1vrd_A 50 IPLVSAAMDTVTEAALAKALAREGGIGIIHKNLTPDEQARQVSIVKKTENGIIY-------DPITVTPDMTVKEAIDLMA 122 (494)
T ss_dssp SSEEECCCTTTCSHHHHHHHHTTTCEEEECSSSCHHHHHHHHHHHHTC--------------------------------
T ss_pred ceeEecchHHHhHHHHHHHHHHcCCceEEecCCChHHHHHHHHhhhhHhhcCcc-------CCeEECCCCCHHHHHHHHH
Confidence 37777777777665554 211 1 122 34566776 5999999999999999999
Q ss_pred HcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCcccccccccccCCCeEEEcCCCCHHHHHHHHHhCCC
Q 031190 89 QHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 89 ~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~v~~vm~~~~~~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
+++++.+||+ |++++++|+||.+|++.. .....++.++|++..+++++++++++.+++++|.++++
T Consensus 123 ~~~~~~~pVv--d~~~~lvGivt~~Dl~~~------~~~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~ 188 (494)
T 1vrd_A 123 EYKIGGLPVV--DEEGRLVGLLTNRDVRFE------KNLSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRI 188 (494)
T ss_dssp --------------------------------------------------------------------------
T ss_pred HcCceEEEEE--cCCCEEEEEEEHHHHHhh------cCCCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCC
Confidence 9999999999 778999999999999641 12467899999961138999999999999999998875
No 70
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.94 E-value=2.5e-09 Score=71.77 Aligned_cols=59 Identities=20% Similarity=0.331 Sum_probs=53.3
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~ 120 (164)
...+++++|.+ +.++++++++.+|++.|.+++...+||+ |++|+++|+||..|+++.+.
T Consensus 67 ~~~~v~~~m~~--------~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~~~Giit~~dll~~l~ 125 (127)
T 3nqr_A 67 EAFSMDKVLRT--------AVVVPESKRVDRMLKEFRSQRYHMAIVI--DEFGGVSGLVTIEDILELIV 125 (127)
T ss_dssp CCCCHHHHCBC--------CCEEETTCBHHHHHHHHHHTTCCEEEEE--CTTSCEEEEEEHHHHHHHC-
T ss_pred CCCCHHHHcCC--------CeEECCCCcHHHHHHHHHhcCCeEEEEE--eCCCCEEEEEEHHHHHHHHh
Confidence 56789999965 7899999999999999999999999999 88899999999999987643
No 71
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.93 E-value=3.3e-09 Score=71.41 Aligned_cols=59 Identities=15% Similarity=0.309 Sum_probs=54.1
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~ 120 (164)
...+++++|.+ +.++.+++++.+|++.|.+++...+||+ |++|+++|+||..|+++.+.
T Consensus 70 ~~~~v~~~m~~--------~~~v~~~~~l~~~~~~m~~~~~~~~~Vv--d~~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 70 GQKQLGAVMRP--------IQVVLNNTALPKVFDQMMTHRLQLALVV--DEYGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp TTSBHHHHSEE--------CCEEETTSCHHHHHHHHHHHTCCEEEEE--CTTSCEEEEEEHHHHHHHHH
T ss_pred CcCCHHHHhcC--------CcCcCCCCcHHHHHHHHHHcCCeEEEEE--cCCCCEEEEEEHHHHHHHHc
Confidence 46789999954 8999999999999999999999999999 88899999999999998765
No 72
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.90 E-value=4.3e-09 Score=70.83 Aligned_cols=60 Identities=13% Similarity=0.281 Sum_probs=53.2
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIV 121 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~ 121 (164)
...+++++|.+ +.++.+++++.+|++.|.+++...+||+ |++|+++|+||..|+++.+..
T Consensus 67 ~~~~v~~~m~~--------~~~v~~~~~l~~~~~~m~~~~~~~~pVv--d~~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 67 PALDIRSLVRP--------AVFIPEVKRLNVLLREFRASRNHLAIVI--DEHGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp TTSCGGGGCBC--------CCEEETTCBHHHHHHHHHTSSCCEEEEE--CC-CCEEEEEEHHHHHHHHHH
T ss_pred CCcCHHHHhCC--------CeEeCCCCcHHHHHHHHHhcCCeEEEEE--eCCCCEEEEEEHHHHHHHHhC
Confidence 35678999964 8999999999999999999999999999 788999999999999987753
No 73
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.90 E-value=1.1e-09 Score=77.23 Aligned_cols=59 Identities=24% Similarity=0.385 Sum_probs=53.3
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~ 120 (164)
...+++++|++ ++.++.+++++.+|+++|.+++++++||+ | +|+++|+||.+|+++.++
T Consensus 103 ~~~~v~~im~~-------~~~tv~~~~~l~~a~~~m~~~~~~~lpVv--d-~g~lvGivt~~Dil~~l~ 161 (170)
T 4esy_A 103 RKLTASAVMTQ-------PVVTAAPEDSVGSIADQMRRHGIHRIPVV--Q-DGVPVGIVTRRDLLKLLL 161 (170)
T ss_dssp TTCBHHHHCBC-------CSCCBCTTSBHHHHHHHHHHTTCSEEEEE--E-TTEEEEEEEHHHHTTTSC
T ss_pred cccchhhhccc-------CcccCCcchhHHHHHHHHHHcCCcEEEEE--E-CCEEEEEEEHHHHHHHHH
Confidence 35689999998 69999999999999999999999999999 5 589999999999987543
No 74
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.90 E-value=4.8e-09 Score=72.74 Aligned_cols=75 Identities=16% Similarity=0.318 Sum_probs=57.5
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCccccc
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~v 131 (164)
...+++++|.+ ++.++.+++++.+|++.|.+++++.+||+ | +|+++|+||.+|+++.+.... ......+
T Consensus 76 ~~~~v~~~m~~-------~~~~v~~~~~l~~~~~~m~~~~~~~lpVv--d-~g~~~Giit~~dil~~l~~~~-~~~~~~~ 144 (157)
T 4fry_A 76 KATRVEEIMTA-------KVRYVEPSQSTDECMALMTEHRMRHLPVL--D-GGKLIGLISIGDLVKSVIADQ-QFTISQL 144 (157)
T ss_dssp SSCBHHHHSBS-------SCCCBCTTSBHHHHHHHHHHHTCSEEEEE--E-TTEEEEEEEHHHHHHHHHTTC-CCCCC--
T ss_pred cccCHHHHcCC-------CCcEECCCCcHHHHHHHHHHcCCCEEEEE--E-CCEEEEEEEHHHHHHHHHHHH-HhhHHHH
Confidence 46899999987 59999999999999999999999999999 6 699999999999998876432 2233455
Q ss_pred cccccc
Q 031190 132 GDIMTE 137 (164)
Q Consensus 132 ~~vm~~ 137 (164)
.+++..
T Consensus 145 ~~~i~~ 150 (157)
T 4fry_A 145 EHYIHG 150 (157)
T ss_dssp ------
T ss_pred HhhccC
Confidence 555544
No 75
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.89 E-value=4.3e-09 Score=71.01 Aligned_cols=59 Identities=14% Similarity=0.234 Sum_probs=53.3
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~ 120 (164)
...+++++|. ++.++++++++.+|++.|.+++.+.+||+ |++|+++|+||..|+++.+.
T Consensus 68 ~~~~v~~~m~--------~~~~v~~~~~l~~~~~~m~~~~~~~~~Vv--d~~g~lvGiit~~Dil~~l~ 126 (130)
T 3hf7_A 68 TKEIMLRAAD--------EIYFVPEGTPLSTQLVKFQRNKKKVGLVV--DEYGDIQGLVTVEDILEEIV 126 (130)
T ss_dssp CHHHHHHHSB--------CCCEEETTCBHHHHHHHHHHHCCCEEEEE--CTTSCEEEEEEHHHHHHHHH
T ss_pred chhhHHHhcc--------CCeEeCCCCcHHHHHHHHHhcCCeEEEEE--cCCCCEEEEeeHHHHHHHHh
Confidence 3467899994 38999999999999999999999999999 88899999999999998765
No 76
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.89 E-value=5.5e-09 Score=71.58 Aligned_cols=60 Identities=22% Similarity=0.324 Sum_probs=54.9
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~ 120 (164)
...++.++|.+ ++.++.+++++.+|++.|.+++++.+||+ |++|+++|+||.+|+++.+.
T Consensus 83 ~~~~v~~~m~~-------~~~~v~~~~~l~~a~~~~~~~~~~~l~Vv--d~~g~~~Giit~~dil~~~~ 142 (152)
T 4gqw_A 83 NGKLVGDLMTP-------APLVVEEKTNLEDAAKILLETKYRRLPVV--DSDGKLVGIITRGNVVRAAL 142 (152)
T ss_dssp -CCBHHHHSEE-------SCCCEESSSBHHHHHHHHHHSSCCEEEEE--CTTSBEEEEEEHHHHHHHHH
T ss_pred ccccHHHhcCC-------CceEECCCCcHHHHHHHHHHCCCCEEEEE--CCCCcEEEEEEHHHHHHHHH
Confidence 35789999998 58999999999999999999999999999 78899999999999998775
No 77
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.88 E-value=6e-09 Score=71.61 Aligned_cols=59 Identities=20% Similarity=0.381 Sum_probs=53.9
Q ss_pred cccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHH
Q 031190 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIV 121 (164)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~ 121 (164)
..+++++| . ++.++++++++.+|++.|.+++...+||+ |++|+++|+||..|+++.+..
T Consensus 87 ~~~v~~~m-~-------~~~~v~~~~~l~~~~~~m~~~~~~~l~Vv--d~~g~~~Giit~~dil~~l~~ 145 (148)
T 3lv9_A 87 KIELEEIL-R-------DIIYISENLTIDKALERIRKEKLQLAIVV--DEYGGTSGVVTIEDILEEIVG 145 (148)
T ss_dssp CCCGGGTC-B-------CCEEEETTSBHHHHHHHHHHHTCSEEEEE--CTTSSEEEEEEHHHHHHHHHH
T ss_pred CccHHHhc-C-------CCeEECCCCCHHHHHHHHHhcCCeEEEEE--eCCCCEEEEEEHHHHHHHHhC
Confidence 67889999 4 49999999999999999999999999999 788999999999999987753
No 78
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.85 E-value=6.4e-09 Score=73.39 Aligned_cols=61 Identities=20% Similarity=0.294 Sum_probs=56.1
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIV 121 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~ 121 (164)
...+++++|.+ ++.++.+++++.+|+++|.+++++.+||+ |++|+++|+||.+|+++.+..
T Consensus 96 ~~~~v~~~m~~-------~~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~~vGiit~~dil~~~~~ 156 (180)
T 3sl7_A 96 YGKVVGDLMTP-------SPLVVRDSTNLEDAARLLLETKFRRLPVV--DADGKLIGILTRGNVVRAALQ 156 (180)
T ss_dssp TTCBHHHHSEE-------SCCCEETTSBHHHHHHHHTTSTTCEEEEE--CTTCBEEEEEEHHHHHHHHHH
T ss_pred ccccHHHHhCC-------CceEeCCCCcHHHHHHHHHHcCCCEEEEE--CCCCeEEEEEEHHHHHHHHHH
Confidence 45789999997 58999999999999999999999999999 788999999999999987764
No 79
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.85 E-value=5.6e-09 Score=69.16 Aligned_cols=57 Identities=26% Similarity=0.406 Sum_probs=52.5
Q ss_pred ccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHH
Q 031190 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119 (164)
Q Consensus 54 ~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~ 119 (164)
.+++++|.+ ++.++.+++++.++++.|.+++.+.+||+ |++|+++|+||.+|+++.+
T Consensus 62 ~~v~~~~~~-------~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv--d~~g~~~Givt~~dl~~~l 118 (122)
T 3kpb_A 62 KTIEEIMTR-------NVITAHEDEPVDHVAIKMSKYNISGVPVV--DDYRRVVGIVTSEDISRLF 118 (122)
T ss_dssp CBGGGTSBS-------SCCCEETTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEEHHHHHHHH
T ss_pred cCHHHHhcC-------CCeEECCCCCHHHHHHHHHHhCCCeEEEE--CCCCCEEEEEeHHHHHHHh
Confidence 479999987 59999999999999999999999999999 7789999999999998765
No 80
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.84 E-value=8.6e-09 Score=71.33 Aligned_cols=59 Identities=25% Similarity=0.396 Sum_probs=54.2
Q ss_pred cccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHH
Q 031190 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIV 121 (164)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~ 121 (164)
..+++++| + ++.++.+++++.+|++.|.+++...+||+ |++|+++|+||..|+++.+..
T Consensus 85 ~~~v~~~m-~-------~~~~v~~~~~l~~~~~~m~~~~~~~lpVv--d~~g~~vGivt~~dil~~l~~ 143 (153)
T 3oco_A 85 KAKISTIM-R-------DIVSVPENMKVPDVMEEMSAHRVPMAIVI--DEYGGTSGIITDKDVYEELFG 143 (153)
T ss_dssp TSBGGGTC-B-------CCEEEETTSBHHHHHHHHHHTTCSCEEEE--CTTSCEEEEECHHHHHHHHHC
T ss_pred CCcHHHHh-C-------CCeEECCCCCHHHHHHHHHHcCCcEEEEE--eCCCCEEEEeeHHHHHHHHhc
Confidence 67899999 5 49999999999999999999999999999 788999999999999987763
No 81
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.84 E-value=9.6e-09 Score=72.59 Aligned_cols=59 Identities=12% Similarity=0.219 Sum_probs=54.0
Q ss_pred cccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHH
Q 031190 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIV 121 (164)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~ 121 (164)
..+++++| + ++.++.+++++.+|++.|.++++..+||+ |++|+++|+||..|+++.+..
T Consensus 106 ~~~v~~im-~-------~~~~v~~~~~l~~a~~~m~~~~~~~~pVv--d~~g~lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 106 RLELVDLV-K-------NCNFVPNSLSGMELLEHFRTTGSQMVFVV--DEYGDLKGLVTLQDMMDALTG 164 (172)
T ss_dssp CCCGGGGC-B-------CCEEEETTCCHHHHHHHHHHHTCSEEEEE--CTTSCEEEEEEHHHHHHHHHT
T ss_pred cccHHHHh-c-------CCeEeCCCCCHHHHHHHHHHcCCeEEEEE--eCCCCEEEEeeHHHHHHHHhC
Confidence 56889999 4 59999999999999999999999999999 788999999999999987763
No 82
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.83 E-value=3.7e-09 Score=71.86 Aligned_cols=60 Identities=18% Similarity=0.323 Sum_probs=53.5
Q ss_pred cccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHH
Q 031190 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (164)
Q Consensus 51 ~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~ 120 (164)
....+++++|.+ +.++.+++++.+|+++|.+++...+||+ |++|+++|+||.+|+++.+.
T Consensus 67 ~~~~~v~~~m~~--------~~~v~~~~~l~~~~~~m~~~~~~~~~Vv--d~~g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 67 GDSDDVKKLLRP--------ATFVPESKRLNVLLREFRANHNHMAIVI--DEYGGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp GGGCCGGGTCBC--------CCEEETTCBHHHHHHHHHHHTCCEEEEE--CTTSCEEEEEEHHHHHTTC-
T ss_pred CCCcCHHHHcCC--------CeEECCCCcHHHHHHHHHhcCCeEEEEE--eCCCCEEEEEEHHHHHHHHh
Confidence 356789999965 8999999999999999999999999999 88899999999999987543
No 83
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.81 E-value=1.2e-08 Score=67.71 Aligned_cols=59 Identities=19% Similarity=0.345 Sum_probs=53.7
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~ 120 (164)
...+++++|.+ ++.++.+++++.++++.|.+++.+.+||+ |+ |+++|+||.+|+++.+.
T Consensus 63 ~~~~v~~~m~~-------~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv--d~-~~~~Gvit~~dl~~~l~ 121 (125)
T 1pbj_A 63 AEVKVWEVMER-------DLVTISPRATIKEAAEKMVKNVVWRLLVE--ED-DEIIGVISATDILRAKM 121 (125)
T ss_dssp TTSBHHHHCBC-------GGGEECTTSCHHHHHHHHHHHTCSEEEEE--ET-TEEEEEEEHHHHHHHHC
T ss_pred cccCHHHHcCC-------CCeEECCCCCHHHHHHHHHhcCCcEEEEE--EC-CEEEEEEEHHHHHHHHH
Confidence 56799999987 59999999999999999999999999999 56 99999999999987653
No 84
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.80 E-value=4.7e-09 Score=70.42 Aligned_cols=58 Identities=10% Similarity=0.224 Sum_probs=53.3
Q ss_pred ccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHH
Q 031190 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (164)
Q Consensus 54 ~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~ 120 (164)
.+++++|.+ ++.++.+++++.+|++.|.+++...+||+ |++|+++|+||..|+++.+.
T Consensus 68 ~~v~~~m~~-------~~~~v~~~~~l~~~~~~~~~~~~~~lpVv--d~~g~~~Giit~~dll~~l~ 125 (128)
T 3gby_A 68 EKLGEELLE-------TVRSYRPGEQLFDNLISVAAAKCSVVPLA--DEDGRYEGVVSRKRILGFLA 125 (128)
T ss_dssp CBCCGGGCB-------CCCCBCTTSBGGGSHHHHHHCSSSEEEEE--CTTCBEEEEEEHHHHHHHHH
T ss_pred CcHHHHccC-------CCcEECCCCCHHHHHHHHHhCCCcEEEEE--CCCCCEEEEEEHHHHHHHHH
Confidence 678999987 58999999999999999999999999999 78899999999999988653
No 85
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.80 E-value=1.1e-08 Score=68.85 Aligned_cols=61 Identities=30% Similarity=0.356 Sum_probs=55.0
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIV 121 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~ 121 (164)
...+++++|.+ ++.++++++++.+|++.|.+++.+.+||+ |++|+++|+||..|+++.+..
T Consensus 65 ~~~~v~~~~~~-------~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv--d~~g~~~Giit~~dll~~~~~ 125 (133)
T 2ef7_A 65 LETKAEEFMTA-------SLITIREDSPITGALALMRQFNIRHLPVV--DDKGNLKGIISIRDITRAIDD 125 (133)
T ss_dssp TTCBGGGTSEE-------CCCCEETTSBHHHHHHHHHHHTCSEEEEE--CTTSCEEEEEEHHHHHHHHHH
T ss_pred cccCHHHHcCC-------CCEEECCCCCHHHHHHHHHHcCCCEEEEE--CCCCeEEEEEEHHHHHHHHHH
Confidence 35789999987 59999999999999999999999999999 778999999999999887653
No 86
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.80 E-value=1.6e-08 Score=68.38 Aligned_cols=61 Identities=28% Similarity=0.451 Sum_probs=54.1
Q ss_pred cccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcC-----CCeEEEEecCCCCcEEEEEehHHHHHHHH
Q 031190 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHN-----VGALVVVKPGEQKSVAGIITERDYLRKII 120 (164)
Q Consensus 51 ~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~-----~~~ipVv~~d~~~~~vGivt~~dil~~~~ 120 (164)
..+.+++++|.+ ++.++.+++++.++++.|.+++ .+.+||+ |++|+++|+||.+|+++.+.
T Consensus 70 ~~~~~v~~~m~~-------~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vv--d~~g~~~Giit~~dll~~~~ 135 (138)
T 2p9m_A 70 TLETTIGDVMTK-------DVITIHEDASILEAIKKMDISGKKEEIINQLPVV--DKNNKLVGIISDGDIIRTIS 135 (138)
T ss_dssp CSSCBHHHHSCS-------SCCCEETTSBHHHHHHHHTCC-----CCCEEEEE--CTTSBEEEEEEHHHHHHHHH
T ss_pred cCCcCHHHHhCC-------CcEEECCCCCHHHHHHHHHhcCCccccccEEEEE--CCCCeEEEEEEHHHHHHHHH
Confidence 356789999987 5999999999999999999999 9999999 77899999999999987653
No 87
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.79 E-value=3.1e-08 Score=67.24 Aligned_cols=66 Identities=20% Similarity=0.334 Sum_probs=53.5
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~ 120 (164)
...++.++|.+.... ..++.++.+++++.+|++.|.+++.+.+||+ |++|+++|+||.+|+++.+.
T Consensus 75 ~~~~v~~~m~~~~~~-~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vv--d~~g~~~Giit~~dil~~l~ 140 (144)
T 2nyc_A 75 LSLSVGEALMRRSDD-FEGVYTCTKNDKLSTIMDNIRKARVHRFFVV--DDVGRLVGVLTLSDILKYIL 140 (144)
T ss_dssp CCSBHHHHHHHCC-------CEECTTSBHHHHHHHHHHHTCSEEEEE--CTTSBEEEEEEHHHHHHHHH
T ss_pred CCccHHHHHhcCccc-cCCCeEECCCCcHHHHHHHHHHCCCCEEEEE--CCCCCEEEEEEHHHHHHHHH
Confidence 367899999762000 0027899999999999999999999999999 77899999999999988765
No 88
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.78 E-value=6.9e-09 Score=72.69 Aligned_cols=60 Identities=20% Similarity=0.236 Sum_probs=54.2
Q ss_pred cccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHH
Q 031190 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (164)
Q Consensus 51 ~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~ 120 (164)
....+++++|.+ ++.++.+++++.+|++.|.+++++.+||+ |+ |+++|+||..|+++.+.
T Consensus 90 ~~~~~v~~~m~~-------~~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~-g~~~Giit~~dil~~~~ 149 (165)
T 3fhm_A 90 SLQQSVSVAMTK-------NVVRCQHNSTTDQLMEIMTGGRFRHVPVE--EN-GRLAGIISIGDVVKARI 149 (165)
T ss_dssp GGTSBGGGTSBS-------SCCCBCTTCBHHHHHHHHHHHTCSEEEEE--ET-TEEEEEEEHHHHHHHTT
T ss_pred cccCCHHHHhcC-------CCeEECCCCcHHHHHHHHHHcCCCEEEEE--EC-CEEEEEEEHHHHHHHHH
Confidence 356789999987 59999999999999999999999999999 66 99999999999988654
No 89
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.78 E-value=2.4e-08 Score=68.86 Aligned_cols=58 Identities=26% Similarity=0.445 Sum_probs=52.4
Q ss_pred cccHHHHhh------hcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHH
Q 031190 53 STTISDILK------AKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119 (164)
Q Consensus 53 ~~~v~dim~------~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~ 119 (164)
..++.++|. . ++.++.+++++.+|++.|.+++.+.+||+ |++|+++|+||..|+++.+
T Consensus 86 ~~~v~~~m~~~~~~~~-------~~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 86 DVSVTKALQHRSHYFE-------GVLKCYLHETLETIINRLVEAEVHRLVVV--DENDVVKGIVSLSDILQAL 149 (152)
T ss_dssp TSBGGGGGGTCCHHHH-------TCSEECTTSBHHHHHHHHHHHTCSEEEEE--CTTSBEEEEEEHHHHHHHH
T ss_pred cchHHHHHhhhhcccC-------CCeEECCCCcHHHHHHHHHHcCCeEEEEE--CCCCeEEEEEEHHHHHHHH
Confidence 467889996 4 58999999999999999999999999999 7789999999999998765
No 90
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=98.78 E-value=1.3e-08 Score=74.18 Aligned_cols=61 Identities=16% Similarity=0.163 Sum_probs=55.5
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIV 121 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~ 121 (164)
.+.+++++|.+ ++.++++++++.+|++.|.++++..+||+ |++|+++|+||..|+++.+..
T Consensus 114 ~~~~v~~im~~-------~~~~v~~~~~l~~a~~~m~~~~~~~lpVV--D~~g~lvGiIT~~Dil~~i~~ 174 (205)
T 3kxr_A 114 PHEPLISLLSE-------DSRALTANTTLLDAAEAIEHSREIELPVI--DDAGELIGRVTLRAATALVRE 174 (205)
T ss_dssp TTSBGGGGCCS-------SCCCEETTSCHHHHHHHHHTSSCSEEEEE--CTTSBEEEEEEHHHHHHHHHH
T ss_pred CcchHHHHhcC-------CCeEECCCCCHHHHHHHHHhcCCCEEEEE--cCCCeEEEEEEHHHHHHHHHH
Confidence 45688999987 59999999999999999999999999999 888999999999999987754
No 91
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.77 E-value=7.7e-09 Score=72.22 Aligned_cols=58 Identities=22% Similarity=0.322 Sum_probs=52.1
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~ 120 (164)
...+++++|.+ ++.++++++++.+|++.|.++++ +||+ |++|+++|+||.+|+++.+.
T Consensus 84 ~~~~v~~im~~-------~~~~v~~~~~l~~~~~~m~~~~~--lpVV--d~~g~l~GiiT~~Dil~~~~ 141 (156)
T 3k6e_A 84 ADTDIVHMTKT-------DVAVVSPDFTITEVLHKLVDESF--LPVV--DAEGIFQGIITRKSILKAVN 141 (156)
T ss_dssp TTSBGGGTCBC-------SCCCBCTTCCHHHHHHHTTTSSE--EEEE--CTTSBEEEEEEHHHHHHHHH
T ss_pred cccCHHHhhcC-------CceecccccHHHHHHHHHHHcCC--eEEE--ecCCEEEEEEEHHHHHHHHH
Confidence 46789999987 69999999999999999988764 9999 88999999999999998764
No 92
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.77 E-value=2.3e-08 Score=69.34 Aligned_cols=60 Identities=20% Similarity=0.318 Sum_probs=54.5
Q ss_pred cccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHH
Q 031190 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (164)
Q Consensus 51 ~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~ 120 (164)
....+++++|.+ +.++.+++++.+|++.|.+++++.+||+ |++|+++|+||..|+++.+.
T Consensus 93 ~~~~~v~~im~~--------~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~~vGiit~~dll~~l~ 152 (157)
T 1o50_A 93 LIAKNASEIMLD--------PVYVHMDTPLEEALKLMIDNNIQEMPVV--DEKGEIVGDLNSLEILLALW 152 (157)
T ss_dssp CSSCBHHHHCBC--------CCCBCTTSBHHHHHHHHHHHTCSEEEEE--CTTSCEEEEEEHHHHHHHHH
T ss_pred HcCCcHHHHcCC--------CeEECCCCCHHHHHHHHHHCCCcEEEEE--cCCCEEEEEEEHHHHHHHHH
Confidence 356789999986 7899999999999999999999999999 77899999999999988765
No 93
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.77 E-value=1.3e-08 Score=68.70 Aligned_cols=60 Identities=20% Similarity=0.347 Sum_probs=54.4
Q ss_pred cccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHH
Q 031190 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (164)
Q Consensus 51 ~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~ 120 (164)
....+++++|.+ ++.++.+++++.+|++.|.+++.+.+||+ | +|+++|+||.+|+++.+.
T Consensus 71 ~~~~~v~~~m~~-------~~~~v~~~~~l~~~~~~m~~~~~~~lpVv--d-~g~~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 71 VKDTQVKEIMTR-------QVAYVDLNNTNEDCMALITEMRVRHLPVL--D-DGKVIGLLSIGDLVKDAI 130 (135)
T ss_dssp GGGSBGGGTSBC-------SCCCBCTTCBHHHHHHHHHHHTCSEEEEE--E-TTEEEEEEEHHHHHHHHH
T ss_pred cccCCHHHhccC-------CCeEECCCCcHHHHHHHHHHhCCCEEEEE--e-CCEEEEEEEHHHHHHHHH
Confidence 356789999987 59999999999999999999999999999 6 689999999999988664
No 94
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.75 E-value=2.4e-08 Score=69.64 Aligned_cols=59 Identities=22% Similarity=0.390 Sum_probs=53.7
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~ 120 (164)
...++.++|.+ ++.++.+++++.+|++.|.+++.+.+||+ |+ |+++|+||..|+++.+.
T Consensus 76 ~~~~v~~im~~-------~~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~-g~lvGiit~~dil~~~~ 134 (160)
T 2o16_A 76 FETPLFEVMHT-------DVTSVAPQAGLKESAIYMQKHKIGCLPVV--AK-DVLVGIITDSDFVTIAI 134 (160)
T ss_dssp CCCBHHHHSCS-------CEEEBCTTSBHHHHHHHHHHTTCSCEEEE--ET-TEEEEEECHHHHHHHHH
T ss_pred cccCHHHHhcC-------CCeEECCCCCHHHHHHHHHHhCCCEEEEE--EC-CEEEEEEEHHHHHHHHH
Confidence 46789999987 59999999999999999999999999999 55 99999999999988654
No 95
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.74 E-value=1.1e-08 Score=76.14 Aligned_cols=58 Identities=21% Similarity=0.306 Sum_probs=49.5
Q ss_pred ccccHHHHhh-hcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHH
Q 031190 52 ESTTISDILK-AKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118 (164)
Q Consensus 52 ~~~~v~dim~-~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~ 118 (164)
...+++++|+ . ++.++.+++++.+|+++|.+++++.+||+ |++|+++|+||.+|+++.
T Consensus 183 ~~~~v~~im~~~-------~~~~~~~~~~~~~~~~~m~~~~~~~~pVv--d~~~~~~Giit~~dll~~ 241 (245)
T 3l2b_A 183 QSLPVDYVMTKD-------NLVAVSTDDLVEDVKVTMSETRYSNYPVI--DENNKVVGSIARFHLIST 241 (245)
T ss_dssp GGSBHHHHSBCT-------TCCCEETTSBHHHHHHHHHHHCCSEEEEE--CTTCBEEEEEECC-----
T ss_pred cCCceeeEecCC-------ccEEECCCCcHHHHHHHHHhcCCceEEEE--cCCCeEEEEEEHHHhhch
Confidence 4578999998 5 59999999999999999999999999999 788999999999999763
No 96
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.74 E-value=2.6e-08 Score=66.93 Aligned_cols=57 Identities=23% Similarity=0.468 Sum_probs=52.2
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~ 118 (164)
...+++++|.+ ++.++++++++.+|++.|.+++.+.+||+ |+ |+++|+||.+|+++.
T Consensus 72 ~~~~v~~~m~~-------~~~~v~~~~~l~~~~~~m~~~~~~~l~Vv--d~-g~~~Giit~~dil~~ 128 (133)
T 1y5h_A 72 NTATAGELARD-------SIYYVDANASIQEMLNVMEEHQVRRVPVI--SE-HRLVGIVTEADIARH 128 (133)
T ss_dssp TTSBHHHHHTT-------CCCCEETTCCHHHHHHHHHHHTCSEEEEE--ET-TEEEEEEEHHHHHHT
T ss_pred cccCHHHHhcC-------CCEEECCCCCHHHHHHHHHHcCCCEEEEE--EC-CEEEEEEEHHHHHHH
Confidence 45789999987 59999999999999999999999999999 55 899999999999864
No 97
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.73 E-value=4.4e-08 Score=68.01 Aligned_cols=65 Identities=17% Similarity=0.157 Sum_probs=53.2
Q ss_pred cccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHH
Q 031190 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIV 121 (164)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~ 121 (164)
..++.++|..... ....+.++.+++++.+|++.|.+++.+++||+ | +|+++|+||.+|+++.+..
T Consensus 83 ~~~v~~~m~~~~~-~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVv--d-~g~l~Giit~~dil~~~~~ 147 (164)
T 2pfi_A 83 QQCLQDILARGCP-TEPVTLTLFSETTLHQAQNLFKLLNLQSLFVT--S-RGRAVGCVSWVEMKKAISN 147 (164)
T ss_dssp CCBHHHHHHTTCC-CBCCCCCEETTCBHHHHHHHHHHTTCSEEEEE--E-TTEEEEEEEHHHHHHHHHH
T ss_pred cchhhhhhccccc-ccCCceEECCCCcHHHHHHHHHHhCCCEEEEE--E-CCEEEEEEEHHHHHHHHHh
Confidence 4679999987200 00016899999999999999999999999999 6 6899999999999987764
No 98
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.73 E-value=2.6e-08 Score=68.35 Aligned_cols=59 Identities=20% Similarity=0.312 Sum_probs=53.1
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIV 121 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~ 121 (164)
...+++++|.+ ++.++.+++++.+|++.|.++++ +||+ |++|+++|+||..|+++.+..
T Consensus 85 ~~~~v~~~m~~-------~~~~v~~~~~l~~a~~~~~~~~~--l~Vv--d~~g~~~Giit~~dil~~l~~ 143 (150)
T 3lqn_A 85 EEMKVEQVMKQ-------DIPVLKLEDSFAKALEMTIDHPF--ICAV--NEDGYFEGILTRRAILKLLNK 143 (150)
T ss_dssp GGCBGGGTCBS-------SCCEEETTCBHHHHHHHHHHCSE--EEEE--CTTCBEEEEEEHHHHHHHHHH
T ss_pred hcCCHHHHhcC-------CCceeCCCCCHHHHHHHHHhCCE--EEEE--CCCCcEEEEEEHHHHHHHHHH
Confidence 46789999987 59999999999999999999887 9999 788999999999999987654
No 99
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.73 E-value=2.4e-08 Score=69.36 Aligned_cols=55 Identities=16% Similarity=0.320 Sum_probs=50.4
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYL 116 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil 116 (164)
...+++++|.+ +.++++++++.+|++.|.+++...+||+ |++|+++|+||..|++
T Consensus 101 ~~~~v~~im~~--------~~~v~~~~~l~~a~~~m~~~~~~~~~Vv--d~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 101 EQFHLKSILRP--------AVFVPEGKSLTALLKEFREQRNHMAIVI--DEYGGTSGLVTFEDII 155 (156)
T ss_dssp GGCCHHHHCBC--------CCEEETTSBHHHHHHHHHHTTCCEEEEE--CTTSSEEEEEEHHHHC
T ss_pred CcccHHHHcCC--------CEEECCCCCHHHHHHHHHhcCCeEEEEE--CCCCCEEEEEEHHHhc
Confidence 35689999965 8999999999999999999999999999 8889999999999984
No 100
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.72 E-value=2.4e-10 Score=94.23 Aligned_cols=87 Identities=16% Similarity=0.256 Sum_probs=42.7
Q ss_pred CceEecCCCcHHHHHHHHHHcCCCeEEEEecCC---CCcEEEEEehHHHHHHHHHcCCCCcccccccccccCCCeEEEcC
Q 031190 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGE---QKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSP 146 (164)
Q Consensus 70 ~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~---~~~~vGivt~~dil~~~~~~~~~~~~~~v~~vm~~~~~~~~v~~ 146 (164)
++.++.+++++.+|+++|.+++++.+||+ |+ +++++|+||.+|+.. .. . .....++.++|++..+++++++
T Consensus 117 ~~~~v~~~~tv~ea~~~m~~~~~~~~pVv--d~~~~~~~lvGiVt~~Dl~~-~~-~--~~~~~~v~~vm~~~~~~~tv~~ 190 (514)
T 1jcn_A 117 DPVVLSPSHTVGDVLEAKMRHGFSGIPIT--ETGTMGSKLVGIVTSRDIDF-LA-E--KDHTTLLSEVMTPRIELVVAPA 190 (514)
T ss_dssp SCCCCCC-----------------CEESC--C--------CCEECTTTTC--------------------CCBCCCCEET
T ss_pred CCEEECCCCCHHHHHHHHHhcCCCEEEEE--eCCCcCCEEEEEEEHHHHHh-hh-h--ccCCCCHHHHhCCCCCCeEECC
Confidence 58999999999999999999999999999 66 589999999999854 21 1 1245789999987112889999
Q ss_pred CCCHHHHHHHHHhCCC
Q 031190 147 DTKVLRAMQLMTGHML 162 (164)
Q Consensus 147 ~~~l~e~~~~m~~~~~ 162 (164)
++++.+++++|.++++
T Consensus 191 ~~~l~ea~~~m~~~~~ 206 (514)
T 1jcn_A 191 GVTLKEANEILQRSKK 206 (514)
T ss_dssp TCCSTTTTTHHHHHTC
T ss_pred CCCHHHHHHHHHHcCC
Confidence 9999999999988775
No 101
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.71 E-value=2.3e-08 Score=68.01 Aligned_cols=58 Identities=24% Similarity=0.277 Sum_probs=52.3
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~ 119 (164)
.+.+++++|.+ ++.++.++ ++.+|++.|.+++.+.+||+ |++|+++|+||.+|+++.+
T Consensus 69 ~~~~v~~~m~~-------~~~~v~~~-~l~~a~~~m~~~~~~~l~Vv--d~~g~~~Giit~~dll~~~ 126 (141)
T 2rih_A 69 LDGPAMPIANS-------PITVLDTD-PVHVAAEKMRRHNIRHVVVV--NKNGELVGVLSIRDLCFER 126 (141)
T ss_dssp TTSBSGGGCBC-------CCEEETTS-BHHHHHHHHHHHTCSEEEEE--CTTSCEEEEEEHHHHHSCH
T ss_pred CCCCHHHHcCC-------CCeEEcCC-CHHHHHHHHHHcCCeEEEEE--cCCCcEEEEEEHHHHHHHH
Confidence 35789999987 59999999 99999999999999999999 7789999999999997643
No 102
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.68 E-value=1.6e-09 Score=88.72 Aligned_cols=80 Identities=30% Similarity=0.422 Sum_probs=0.0
Q ss_pred CceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHcCCCCcccccccccccCCCeEEEcCCCC
Q 031190 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTK 149 (164)
Q Consensus 70 ~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~~~~~~~~~v~~vm~~~~~~~~v~~~~~ 149 (164)
++.++.+++++.++++.|.+++++.+||+ |+ ++++|+|+.+|++. ....++.++|++ ++++++++++
T Consensus 102 ~~~~v~~~~tv~ea~~~~~~~~~~~~pVv--d~-~~lvGivt~~Dl~~--------~~~~~v~~im~~--~~~~v~~~~~ 168 (486)
T 2cu0_A 102 DVITIAPDETVDFALFLMEKHGIDGLPVV--ED-EKVVGIITKKDIAA--------REGKLVKELMTK--EVITVPESIE 168 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEECCCCCHHHHHHHHHHcCCcEEEEE--EC-CEEEEEEEHHHhcc--------CCCCCHHHHccC--CCeEECCcCc
Confidence 68999999999999999999999999999 65 99999999999954 135689999997 5899999999
Q ss_pred HHHHHHHHHhCCC
Q 031190 150 VLRAMQLMTGHML 162 (164)
Q Consensus 150 l~e~~~~m~~~~~ 162 (164)
+.+++++|.++++
T Consensus 169 l~eal~~m~~~~~ 181 (486)
T 2cu0_A 169 VEEALKIMIENRI 181 (486)
T ss_dssp -------------
T ss_pred HHHHHHHHHHcCC
Confidence 9999999988864
No 103
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.67 E-value=2.8e-08 Score=69.11 Aligned_cols=64 Identities=20% Similarity=0.366 Sum_probs=55.3
Q ss_pred cccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCC---cEEEEEehHHHHHHHHH
Q 031190 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQK---SVAGIITERDYLRKIIV 121 (164)
Q Consensus 51 ~~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~---~~vGivt~~dil~~~~~ 121 (164)
....+++++|.+.. ++.++.+++++.+|++.|.+++++++||+ |++| +++|+||.+|+++.+..
T Consensus 78 ~~~~~v~~~m~~~~-----~~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 78 LTSVPVHIIMTRMP-----NITVCRREDYVMDIAKHLIEKQIDALPVI--KDTDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp TTTCBGGGTSEETT-----SCCCBCTTSBHHHHHHHHHHHTCSEEEEE--EECSSSEEEEEEEEHHHHHHHHHH
T ss_pred ccCcCHHHHHcCCC-----CcEEECCCCCHHHHHHHHHHcCCcEEEEE--eCCCcceeEEEEEEHHHHHHHHHH
Confidence 35678999998621 28999999999999999999999999999 6677 99999999999887653
No 104
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.65 E-value=4e-08 Score=66.40 Aligned_cols=59 Identities=15% Similarity=0.333 Sum_probs=53.5
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~ 120 (164)
...++.++|.+ ++.++++++++.+|++.|.+++.+++ |+ |++|+++|+||..|+++.+.
T Consensus 70 ~~~~v~~~m~~-------~~~~v~~~~~l~~~~~~m~~~~~~~l-Vv--d~~g~~~Giit~~dil~~~~ 128 (138)
T 2yzi_A 70 YDIPVERIMTR-------NLITANVNTPLGEVLRKMAEHRIKHI-LI--EEEGKIVGIFTLSDLLEASR 128 (138)
T ss_dssp TTSBGGGTCBC-------SCCEEETTSBHHHHHHHHHHHTCSEE-EE--EETTEEEEEEEHHHHHHHHH
T ss_pred ccCCHHHHhhC-------CCeEECCCCcHHHHHHHHHhcCCCEE-EE--CCCCCEEEEEEHHHHHHHHH
Confidence 45789999987 59999999999999999999999999 99 67899999999999988764
No 105
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.65 E-value=6.4e-08 Score=66.83 Aligned_cols=59 Identities=22% Similarity=0.380 Sum_probs=53.0
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIV 121 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~ 121 (164)
...++.++|.+ ++.++++++++.+|++.|.++++ +||+ |++|+++|+||.+|+++.+..
T Consensus 81 ~~~~v~~~m~~-------~~~~v~~~~~l~~a~~~m~~~~~--l~Vv--d~~g~~~Giit~~dil~~~~~ 139 (157)
T 2emq_A 81 ETMKVEEVMNR-------NIPRLRLDDSLMKAVGLIVNHPF--VCVE--NDDGYFAGIFTRREVLKQLNK 139 (157)
T ss_dssp GTCBGGGTCBC-------CCCEEETTSBHHHHHHHHHHSSE--EEEE--CSSSSEEEEEEHHHHHHHHHH
T ss_pred cCCcHHHHhCC-------CCceecCCCcHHHHHHHHhhCCE--EEEE--cCCCeEEEEEEHHHHHHHHHH
Confidence 45789999987 59999999999999999999987 9999 778999999999999987654
No 106
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.65 E-value=5e-08 Score=69.08 Aligned_cols=61 Identities=21% Similarity=0.223 Sum_probs=54.8
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHHc
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~~ 122 (164)
...+++++|.+ ++.++.+++++.+|++.|.+++.+++||+ | +|+++|+||.+|+++.+...
T Consensus 106 ~~~~v~~im~~-------~~~~v~~~~~l~~a~~~m~~~~~~~l~Vv--d-~g~~vGiit~~dll~~l~~~ 166 (185)
T 2j9l_A 106 PTLKLRNILDL-------SPFTVTDLTPMEIVVDIFRKLGLRQCLVT--H-NGRLLGIITKKDVLKHIAQM 166 (185)
T ss_dssp CCEECGGGEES-------SCCEEETTSBHHHHHHHHHHHTCSEEEEE--E-TTEEEEEEEHHHHHHHHHHH
T ss_pred cCccHHHhhCc-------CCeEeCCCCCHHHHHHHHHhCCCcEEEEE--E-CCEEEEEEEHHHHHHHHHHh
Confidence 45689999987 59999999999999999999999999999 6 79999999999999877643
No 107
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.63 E-value=4.7e-08 Score=67.18 Aligned_cols=56 Identities=18% Similarity=0.364 Sum_probs=50.7
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~ 117 (164)
...+++++|.+ ++.++.+++++.+|++.|.+++++.+||+ |++ +++|+||..|+++
T Consensus 93 ~~~~v~~~m~~-------~~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 93 RDASIADVMTR-------GGIRIRPGTLAVDALNLMQSRHITCVLVA--DGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp TTCBHHHHSEE-------SCCEECTTCBHHHHHHHHHHHTCSEEEEE--ETT-EEEEEEEHHHHTC
T ss_pred ccCcHHHHcCC-------CCeEECCCCCHHHHHHHHHHcCCCEEEEe--cCC-EEEEEEEHHHhhc
Confidence 56789999987 59999999999999999999999999999 554 9999999999853
No 108
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.63 E-value=4.6e-08 Score=69.70 Aligned_cols=59 Identities=20% Similarity=0.288 Sum_probs=53.5
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~ 119 (164)
...+++++|.+ ++.++.+++++.+|++.|.+++.+.+||+ |++|+++|+||..|+++.+
T Consensus 73 ~~~~v~~im~~-------~~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~~~Givt~~dll~~~ 131 (184)
T 1pvm_A 73 DEVPIRLVMRK-------PIPKVKSDYDVKDVAAYLSENGLERCAVV--DDPGRVVGIVTLTDLSRYL 131 (184)
T ss_dssp GGSBGGGTSBS-------SCCEEETTCBHHHHHHHHHHHTCSEEEEE--CTTCCEEEEEEHHHHTTTS
T ss_pred ccCCHHHHhCC-------CCcEECCCCCHHHHHHHHHHcCCcEEEEE--cCCCeEEEEEEHHHHHHHH
Confidence 45789999987 59999999999999999999999999999 7779999999999997643
No 109
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.62 E-value=8.6e-08 Score=73.28 Aligned_cols=61 Identities=23% Similarity=0.263 Sum_probs=55.3
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIV 121 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~ 121 (164)
...+++++|.+ ++.++++++++.+|++.|.++++.++||+ |++|+++|+||..|+++.+..
T Consensus 199 ~~~~v~~im~~-------~~~~v~~~~~l~ea~~~m~~~~~~~lpVV--d~~g~lvGiIT~~Dil~~i~~ 259 (286)
T 2oux_A 199 DDTLIADILNE-------RVISVHVGDDQEDVAQTIRDYDFLAVPVT--DYDDHLLGIVTVDDIIDVIDD 259 (286)
T ss_dssp TTSBHHHHSBS-------CCCCEETTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEEHHHHHHHHHH
T ss_pred CCCcHHHHcCC-------CCeeecCCCCHHHHHHHHHHcCCcEEEEE--cCCCeEEEEEEHHHHHHHHHH
Confidence 45789999987 59999999999999999999999999999 788999999999999887653
No 110
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.61 E-value=5.8e-08 Score=67.09 Aligned_cols=58 Identities=22% Similarity=0.309 Sum_probs=52.2
Q ss_pred cccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHH
Q 031190 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIV 121 (164)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~ 121 (164)
..+++++|.+ ++.++.+++++.+|++.|.+++ .+||+ |++|+++|+||.+|+++.+..
T Consensus 85 ~~~v~~~m~~-------~~~~v~~~~~l~~a~~~~~~~~--~lpVv--d~~g~~~Giit~~dil~~l~~ 142 (156)
T 3ctu_A 85 DTDIVHMTKT-------DVAVVSPDFTITEVLHKLVDES--FLPVV--DAEGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp TSBGGGGCBC-------SCCCBCSSCCHHHHHHHTTTSS--EEEEE--CTTSBEEEEEETTHHHHHHHH
T ss_pred cCcHHHhccC-------CceeeCCCCcHHHHHHHHHHcC--eEEEE--cCCCeEEEEEEHHHHHHHHHH
Confidence 6789999987 5999999999999999999876 79999 788999999999999987754
No 111
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.61 E-value=9e-08 Score=66.40 Aligned_cols=59 Identities=14% Similarity=0.282 Sum_probs=52.9
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIV 121 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~ 121 (164)
...++.++|.+ ++.++.+++++.+|++.|.++++ +||+ |++|+++|+||.+|+++.+..
T Consensus 84 ~~~~v~~~m~~-------~~~~v~~~~~l~~a~~~m~~~~~--lpVv--d~~g~~vGiit~~dil~~~~~ 142 (159)
T 1yav_A 84 DQITVEEVMLT-------DIPRLHINDPIMKGFGMVINNGF--VCVE--NDEQVFEGIFTRRVVLKELNK 142 (159)
T ss_dssp TTSBHHHHSBC-------SCCEEETTSBHHHHHHHTTTCSE--EEEE--CTTCBEEEEEEHHHHHHHHHH
T ss_pred ccCCHHHhcCC-------CCceEcCCCCHHHHHHHHHhCCE--EEEE--eCCCeEEEEEEHHHHHHHHHH
Confidence 56789999987 59999999999999999999877 9999 778999999999999887653
No 112
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.58 E-value=9.5e-08 Score=67.73 Aligned_cols=50 Identities=12% Similarity=0.167 Sum_probs=46.9
Q ss_pred CceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHH
Q 031190 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIV 121 (164)
Q Consensus 70 ~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~ 121 (164)
++.++++++++.+|++.|.+++...+||+ |++|+++|+||..|+++.+..
T Consensus 108 ~~~~v~~~~~l~~al~~m~~~~~~~~~Vv--de~g~lvGiIT~~Dil~~l~~ 157 (173)
T 3ocm_A 108 DPIIVHESIGILRLMDTLKRSRGQLVLVA--DEFGAIEGLVTPIDVFEAIAG 157 (173)
T ss_dssp CCCEECGGGCHHHHHHHHHHSTTCCEEEE--CTTCCEEEEECHHHHHHHHHC
T ss_pred CCeEECCCCcHHHHHHHHHHcCCeEEEEE--eCCCCEEEEEeHHHHHHHHhC
Confidence 48999999999999999999999999999 788999999999999988764
No 113
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=98.55 E-value=7.5e-08 Score=73.17 Aligned_cols=59 Identities=24% Similarity=0.375 Sum_probs=52.4
Q ss_pred cccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHH
Q 031190 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (164)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~ 120 (164)
..+++++|.+ ++.++++++++.++++.|.+++...+||+ |++|+++|+||..|+++.+.
T Consensus 198 ~~~v~~im~~-------~~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 198 RTRVAEIMNP-------KVVYVRTDTDQEEVARLMADYDFTVLPVV--DEEGRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp TCBSTTTSBS-------SCCCEETTSBHHHHHHHHHHHTCSEEEEE--CTTSBEEEEEEHHHHHHHC-
T ss_pred CCcHHHHhCC-------CCeEEeCCCCHHHHHHHHHhcCCCEEEEE--eCCCeEEEEEEHHHHHHHHH
Confidence 4567788866 59999999999999999999999999999 78899999999999987654
No 114
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=98.40 E-value=5e-07 Score=73.73 Aligned_cols=61 Identities=23% Similarity=0.361 Sum_probs=54.7
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIV 121 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~~ 121 (164)
.+.+++++|.+ ++.++++++++.++++.|.+++...+||+ |++|+++|+||..|+++.+..
T Consensus 217 ~~~~v~dim~~-------~~~~v~~~~~l~ea~~~m~~~~~~~lpVV--De~g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 217 PRTRVAEIMNP-------KVVYVRTDTDQEEVARLMADYDFTVLPVV--DEEGRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp TTSBGGGTSBS-------SCCCEESSSBHHHHHHHHHHHTCSEEEEE--CTTSBEEEEEEHHHHHHHHHH
T ss_pred CCCcHHHHhCC-------CCeEEeCCCcHHHHHHHHHhcCCcEEEEE--cCCCEEEEEEehHhhHHHHHH
Confidence 35678888876 59999999999999999999999999999 888999999999999887653
No 115
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.33 E-value=6.5e-06 Score=67.77 Aligned_cols=61 Identities=23% Similarity=0.308 Sum_probs=55.2
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~ 120 (164)
.+.+++++|++. ++++++++.++.+++++|.+++...+||+ |++|+++|+||.+|+++.+.
T Consensus 173 ~~~~V~~vM~~~------~~vtv~~~~~l~eal~~m~~~~i~~lpVV--De~g~l~GiIT~~Dil~~~~ 233 (511)
T 3usb_A 173 YSIKISDVMTKE------QLITAPVGTTLSEAEKILQKYKIEKLPLV--DNNGVLQGLITIKDIEKVIE 233 (511)
T ss_dssp SSSBHHHHCCCC------CCCCEETTCCHHHHHHHHHHHTCSEEEEE--CTTSBEEEEEEHHHHHHHHH
T ss_pred CCCcHHHhcccC------CCEEECCCCCHHHHHHHHHHcCCCEEEEE--eCCCCEeeeccHHHHHHhhh
Confidence 457899999852 39999999999999999999999999999 88999999999999988764
No 116
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.31 E-value=6.6e-07 Score=67.21 Aligned_cols=48 Identities=8% Similarity=0.052 Sum_probs=44.5
Q ss_pred CceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHH
Q 031190 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (164)
Q Consensus 70 ~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~ 120 (164)
.++++.+++++.++..+|...++.++||+ + .|+++||||++||++++.
T Consensus 198 sP~tv~~~tsL~~v~~LF~~lglr~l~V~--~-~GrLVGIVTrkDl~kai~ 245 (250)
T 2d4z_A 198 SPFQLVEGTSLQKTHTLFSLLGLDRAYVT--S-MGKLVGVVALAEIQAAIE 245 (250)
T ss_dssp CSCCBCTTCBHHHHHHHHHHHTCSEEEEE--E-TTEEEEEEEHHHHHHHHH
T ss_pred CCeEECCCCcHHHHHHHHHHhCCeEEEEE--E-CCEEEEEEEHHHHHHHHH
Confidence 69999999999999999999999999999 4 699999999999987653
No 117
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.23 E-value=5.3e-07 Score=74.10 Aligned_cols=61 Identities=20% Similarity=0.342 Sum_probs=0.0
Q ss_pred cccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHH
Q 031190 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (164)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~ 120 (164)
+.+++++|++.+ ++.++++++++.+|+++|.+++++.+||+ |++|+++|+||.+|+++.+.
T Consensus 160 ~~~V~diM~~~~-----~~~tv~~~~sl~ea~~~m~~~~i~~lpVV--De~g~lvGiIT~~Dil~~~~ 220 (503)
T 1me8_A 160 ETKVSDMMTPFS-----KLVTAHQDTKLSEANKIIWEKKLNALPII--DDDQHLRYIVFRKDYDRSQV 220 (503)
T ss_dssp --------------------------------------------------------------------
T ss_pred cCcHHHHhCCCC-----CCEEEcCCCcHHHHHHHHHHcCCCEEEEE--cCCCeEEEEEEecHHHHhhh
Confidence 457889998722 29999999999999999999999999999 78899999999999988665
No 118
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=98.05 E-value=2.2e-06 Score=72.32 Aligned_cols=53 Identities=15% Similarity=0.060 Sum_probs=47.1
Q ss_pred cHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHH
Q 031190 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117 (164)
Q Consensus 55 ~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~ 117 (164)
++.++|++ ++.++++++++.++.+.|.+++.+.+||+ ++|+++|+||.+|+++
T Consensus 569 ~v~~iMt~-------~pitV~~~~~l~ea~~~M~~~~i~~lpVv---e~G~lvGIVT~~Dll~ 621 (632)
T 3org_A 569 SLVVPCDV-------SPIVVTSYSLVRQLHFLFVMLMPSMIYVT---ERGKLVGIVEREDVAY 621 (632)
T ss_dssp --CCSCCC-------CCCEEETTCBHHHHHHHHHHTCCSEEEEE---ETTEEEEEEEGGGTEE
T ss_pred ccchhhcC-------CCceecCCCcHHHHHHHHHhcCCCEEEEE---ECCEEEEEEehhhHHH
Confidence 37778887 69999999999999999999999999999 3689999999999965
No 119
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.94 E-value=1.3e-05 Score=65.52 Aligned_cols=60 Identities=18% Similarity=0.305 Sum_probs=52.5
Q ss_pred cccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHH
Q 031190 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (164)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~ 120 (164)
+.+++++|.+. ++.++++++++.++++.|.+++...+||+ |++|+++|+||..|+++.+.
T Consensus 151 ~~~v~~im~~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVV--d~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 151 NAPISEHMTSE------HLVTAAVGTDLETAERILHEHRIEKLPLV--DNSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp SSBTTTSCCCS------CCCCEETTCCHHHHHHHHHHTTCSEEEEE--CTTSBEEEEEEHHHHHHHHH
T ss_pred CCcHHHHcCCC------CCEEECCCCCHHHHHHHHHHcCCCEEEEE--cCCCcEEEEEEHHHHHHHHh
Confidence 45677777741 28899999999999999999999999999 88999999999999988765
No 120
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.91 E-value=9.7e-06 Score=66.89 Aligned_cols=59 Identities=10% Similarity=0.159 Sum_probs=50.6
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCC----CCcEEEEEehHHHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGE----QKSVAGIITERDYLRKIIV 121 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~----~~~~vGivt~~dil~~~~~ 121 (164)
...+|+++|.+ ++.++.+++++.+++++|.++++ +||+ |+ +|+++|+||..|+++.+..
T Consensus 449 ~~~~V~~im~~-------~~~~v~~~~~l~~a~~~m~~~~~--~pVV--d~~~~~~g~lvGIVT~~Dll~~l~~ 511 (527)
T 3pc3_A 449 QSDPAIKALNK-------RVIRLNESEILGKLARVLEVDPS--VLIL--GKNPAGKVELKALATKLDVTTFIAA 511 (527)
T ss_dssp TTSBGGGGEET-------TCCEEETTSBHHHHHHHHTTCSE--EEEE--EECSSSCEEEEEEEEHHHHHHHHHT
T ss_pred CCCcHHHHhcC-------CCeEECCCCcHHHHHHHHhhCCE--EEEE--eCCcccCCeEEEEEEHHHHHHHHHh
Confidence 45688999987 69999999999999999977664 7999 55 3899999999999988764
No 121
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.83 E-value=4.6e-06 Score=68.42 Aligned_cols=60 Identities=17% Similarity=0.318 Sum_probs=42.4
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~ 118 (164)
.+.++.++|++++ ++++++++.++.+++++|.+++...+||+ |++|+++|+||.+|+++.
T Consensus 147 ~~~~v~diM~p~~-----~~vtv~~~~~l~ea~~~m~~~~i~~lpVV--De~G~l~GiIT~~DIl~~ 206 (496)
T 4fxs_A 147 LTKSVAAVMTPKE-----RLATVKEGATGAEVQEKMHKARVEKILVV--NDEFQLKGMITAKDFHKA 206 (496)
T ss_dssp TTSBGGGTSEEGG-----GCCEEECC----CGGGTCC---CCCEEEE--CTTSBCCEEECCC-----
T ss_pred CCCcHHHHhcCCC-----CCEEECCCCCHHHHHHHHHHcCCCEEEEE--cCCCCEEEeehHhHHHHh
Confidence 4578999998321 28999999999999999999999999999 889999999999999764
No 122
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.81 E-value=2.6e-06 Score=69.78 Aligned_cols=61 Identities=16% Similarity=0.272 Sum_probs=0.0
Q ss_pred ccccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHH
Q 031190 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119 (164)
Q Consensus 52 ~~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~ 119 (164)
.+.+++++|+++. +++++++++++.+|+++|.++++..+||+ |++|+++|+||.+|+++..
T Consensus 145 ~~~~V~~vMtp~~-----~~vtv~~~~~l~ea~~~m~~~~i~~lpVV--De~g~lvGiIT~~Dil~~~ 205 (490)
T 4avf_A 145 AGDTVAAIMTPKD-----KLVTAREGTPLEEMKAKLYENRIEKMLVV--DENFYLRGLVTFRDIEKAK 205 (490)
T ss_dssp --------------------------------------------------------------------
T ss_pred cCCcHHHHhccCC-----CCEEECCCCcHHHHHHHHHHcCCCEEEEE--cCCCcEEEEEehHHhhhhc
Confidence 3568899998321 28999999999999999999999999999 8899999999999998754
No 123
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.76 E-value=3.5e-06 Score=69.05 Aligned_cols=58 Identities=16% Similarity=0.253 Sum_probs=0.0
Q ss_pred cccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHH
Q 031190 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119 (164)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~ 119 (164)
+.+|+++|++ ++++++.+.++.+|.++|.++++..+||+ |++++++|+||.+|+++..
T Consensus 199 ~~~V~evMT~-------~lvt~~~~~~leeA~~iL~~~kieklpVV--d~~g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 199 ETPIKSVMTT-------EVVTGSSPITLEKANSLLRETKKGKLPIV--DSNGHLVSLVARSDLLKNQ 256 (556)
T ss_dssp -------------------------------------------------------------------
T ss_pred ceEhhhhccc-------ceEEecCCCCHHHHHHHHHHccccceeEE--ccCCcEEEEEEechhhhhh
Confidence 4689999998 59999999999999999999999999999 8899999999999997643
No 124
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.76 E-value=3.7e-06 Score=68.87 Aligned_cols=61 Identities=23% Similarity=0.382 Sum_probs=4.4
Q ss_pred cccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHHHH
Q 031190 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120 (164)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~~~ 120 (164)
+.++.++|.+.. ++.++.+++++.+++++|.++++..+||+ |++|+++|+||..|+++.+.
T Consensus 154 ~~~v~~im~~~~-----~~~~v~~~~~l~ea~~~m~~~~~~~lpVV--d~~g~lvGiIt~~Dll~~~~ 214 (494)
T 1vrd_A 154 SKKIKDLMTPRE-----KLIVAPPDISLEKAKEILHQHRIEKLPLV--SKDNKLVGLITIKDIMSVIE 214 (494)
T ss_dssp --------------------------------------------------------------CHHHHT
T ss_pred CCcHHHHhCCCC-----CCeEECCCCCHHHHHHHHHHcCCcEEEEE--cCCCeEEEEEEHHHHHhhhc
Confidence 357888998521 38999999999999999999999999999 78899999999999988654
No 125
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.69 E-value=5.3e-06 Score=67.89 Aligned_cols=57 Identities=21% Similarity=0.351 Sum_probs=0.0
Q ss_pred cccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHH
Q 031190 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118 (164)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~ 118 (164)
..++.++|.+ ++.++++++++.++++.|.+++.+.+||+ |++|+++|+||.+|+++.
T Consensus 149 ~~~v~~im~~-------~~~~v~~~~~l~eal~~m~~~~~~~lpVV--de~g~lvGiiT~~Dil~~ 205 (486)
T 2cu0_A 149 GKLVKELMTK-------EVITVPESIEVEEALKIMIENRIDRLPVV--DERGKLVGLITMSDLVAR 205 (486)
T ss_dssp ------------------------------------------------------------------
T ss_pred CCCHHHHccC-------CCeEECCcCcHHHHHHHHHHcCCCEEEEE--ecCCeEEEEEEHHHHHHh
Confidence 3467788886 58999999999999999999999999999 788999999999999774
No 126
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.30 E-value=9.3e-06 Score=66.83 Aligned_cols=59 Identities=17% Similarity=0.303 Sum_probs=40.7
Q ss_pred cccHHHHhhhcCCCCCCCceEecCCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHHHHH
Q 031190 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118 (164)
Q Consensus 53 ~~~v~dim~~~~~~~~~~~~~v~~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~dil~~ 118 (164)
..++.++|.+.. ++.++.+++++.+++++|.+++...+||+ |++|+++|+||.+|+++.
T Consensus 172 ~~~v~~vm~~~~-----~~~tv~~~~~l~ea~~~m~~~~~~~lpVV--d~~g~lvGiIt~~Dll~~ 230 (514)
T 1jcn_A 172 TTLLSEVMTPRI-----ELVVAPAGVTLKEANEILQRSKKGKLPIV--NDCDELVAIIARTDLKKN 230 (514)
T ss_dssp ---------CCB-----CCCCEETTCCSTTTTTHHHHHTCSCCCEE--SSSSCCC----CCCCSSC
T ss_pred CCCHHHHhCCCC-----CCeEECCCCCHHHHHHHHHHcCCCcccEE--CCCCeEEEEEEHHHHHHH
Confidence 457888998521 28999999999999999999999999999 888999999999999753
No 127
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=91.40 E-value=0.23 Score=29.19 Aligned_cols=23 Identities=22% Similarity=0.290 Sum_probs=21.2
Q ss_pred eEEEcCCCCHHHHHHHHHhCCCC
Q 031190 141 LITVSPDTKVLRAMQLMTGHMLL 163 (164)
Q Consensus 141 ~~~v~~~~~l~e~~~~m~~~~~~ 163 (164)
++++++++++.+|+++|.++++.
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~ 24 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAG 24 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCS
T ss_pred CEEECCCCcHHHHHHHHHHcCCC
Confidence 78999999999999999999874
No 128
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=84.59 E-value=1.2 Score=25.21 Aligned_cols=22 Identities=23% Similarity=0.369 Sum_probs=20.0
Q ss_pred eEEEcCCCCHHHHHHHHHhCCC
Q 031190 141 LITVSPDTKVLRAMQLMTGHML 162 (164)
Q Consensus 141 ~~~v~~~~~l~e~~~~m~~~~~ 162 (164)
+.++++++++.++++.|.++++
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~ 23 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKA 23 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTC
T ss_pred CeEECCCCcHHHHHHHHHHcCC
Confidence 6789999999999999998876
No 129
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=82.45 E-value=0.55 Score=28.37 Aligned_cols=34 Identities=12% Similarity=0.237 Sum_probs=30.3
Q ss_pred hhHHHHHhhcCCCChHHHHHHhCccccccccccc
Q 031190 2 QGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVS 35 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 35 (164)
+.|.++++..+.++..+|++.++.+..+++.++.
T Consensus 5 ~~Il~~L~~~g~vsv~eLa~~l~VS~~TIRrdL~ 38 (78)
T 1xn7_A 5 IQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQ 38 (78)
T ss_dssp HHHHHHHHHSCSBCHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcHHHHHHHHCcCHHHHHHHHH
Confidence 5688889999999999999999999999887764
No 130
>2k02_A Ferrous iron transport protein C; FEOC, iron-sulfur, metal-binding, metal binding protein; NMR {Klebsiella pneumoniae subsp}
Probab=82.02 E-value=0.45 Score=29.46 Aligned_cols=35 Identities=9% Similarity=0.268 Sum_probs=31.0
Q ss_pred ChhHHHHHhhcCCCChHHHHHHhCccccccccccc
Q 031190 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVS 35 (164)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 35 (164)
++.|.++++..+.++..+|++.++++..+++.++.
T Consensus 4 L~~Il~~L~~~g~vsv~eLA~~l~VS~~TIRrDL~ 38 (87)
T 2k02_A 4 LMEVRDMLALQGRMEAKQLSARLQTPQPLIDAMLE 38 (87)
T ss_dssp THHHHHHHHHSCSEEHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHCcCHHHHHHHHH
Confidence 36788899999999999999999999999887764
No 131
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=68.77 E-value=15 Score=22.01 Aligned_cols=29 Identities=10% Similarity=0.177 Sum_probs=23.5
Q ss_pred CCCeEEEEecCCCCcEEEEEehHHHHHHHHH
Q 031190 91 NVGALVVVKPGEQKSVAGIITERDYLRKIIV 121 (164)
Q Consensus 91 ~~~~ipVv~~d~~~~~vGivt~~dil~~~~~ 121 (164)
+...+-|+ |++|.-+|+++.++.++.+-.
T Consensus 12 r~~eVrli--~~~Ge~lGv~~~~eAl~~A~e 40 (78)
T 1tif_A 12 RAREVRLI--DQNGDQLGIKSKQEALEIAAR 40 (78)
T ss_dssp CCSEEEEE--CTTSCEEEEEEHHHHHHHHHH
T ss_pred CCCEEEEE--CCCCcCCCcccHHHHHHHHHH
Confidence 34667889 889999999999999876543
No 132
>2htj_A P fimbrial regulatory protein KS71A; winged helix-turn-helix, PAP PILI, transcription activator; NMR {Escherichia coli} SCOP: a.4.5.73
Probab=55.16 E-value=6.2 Score=23.25 Aligned_cols=32 Identities=6% Similarity=0.074 Sum_probs=26.1
Q ss_pred hHHHHHhhcCCCChHHHHHHhCcccccccccc
Q 031190 3 GAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVV 34 (164)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 34 (164)
.|.+++...++++..+|++.+++++++++..+
T Consensus 4 ~Il~~L~~~~~~s~~eLa~~lgvs~~tv~r~L 35 (81)
T 2htj_A 4 EILEFLNRHNGGKTAEIAEALAVTDYQARYYL 35 (81)
T ss_dssp HHHHHHHHSCCCCHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHH
Confidence 46777777789999999999999888766544
No 133
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=52.21 E-value=6 Score=22.66 Aligned_cols=32 Identities=13% Similarity=0.255 Sum_probs=24.4
Q ss_pred hHHHHHhhc-CCCChHHHHHHhCcccccccccc
Q 031190 3 GAIQSFLSH-GNIVKSAVLQRIRLVNPMLRPVV 34 (164)
Q Consensus 3 ~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~ 34 (164)
.|++++... .++++.+|++.++++++++...+
T Consensus 14 ~IL~~L~~~~~~~s~~eLA~~lglsr~tv~~~l 46 (67)
T 2heo_A 14 KILQVLSDDGGPVAIFQLVKKCQVPKKTLNQVL 46 (67)
T ss_dssp HHHHHHHHHCSCEEHHHHHHHHCSCHHHHHHHH
T ss_pred HHHHHHHHcCCCcCHHHHHHHHCcCHHHHHHHH
Confidence 467777765 57999999999999877765433
No 134
>1qbj_A Protein (double-stranded RNA specific adenosine D (ADAR1)); protein-Z-DNA complex, hydrolase-DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: a.4.5.19 PDB: 3f21_A* 3f22_A* 3f23_A* 3irr_A* 3irq_D* 2gxb_A 2acj_A 2l54_A
Probab=51.43 E-value=6.3 Score=23.71 Aligned_cols=33 Identities=9% Similarity=0.107 Sum_probs=25.8
Q ss_pred hhHHHHHhhcC---CCChHHHHHHhCcccccccccc
Q 031190 2 QGAIQSFLSHG---NIVKSAVLQRIRLVNPMLRPVV 34 (164)
Q Consensus 2 ~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~ 34 (164)
+.|.++++..+ .++..+||..+++++.++...+
T Consensus 13 ~~IL~~L~~~~pg~~~t~~eLA~~Lgvsr~tV~~~L 48 (81)
T 1qbj_A 13 QRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVL 48 (81)
T ss_dssp HHHHHHHHHHCTTCCBCHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCcCHHHHHHHHCcCHHHHHHHH
Confidence 35677888888 8999999999999776655443
No 135
>2jt1_A PEFI protein; solution structure, winged helix-turn-helix, transcripti regulatory protein, structural genomics, PSI-2; NMR {Salmonella typhimurium LT2}
Probab=49.20 E-value=5.1 Score=23.90 Aligned_cols=33 Identities=9% Similarity=0.021 Sum_probs=24.7
Q ss_pred hhHHHHHhhc------CCCChHHHHHHhCcccccccccc
Q 031190 2 QGAIQSFLSH------GNIVKSAVLQRIRLVNPMLRPVV 34 (164)
Q Consensus 2 ~~~~~~~~~~------~~~~~~~i~~~~~~~~~~~~~~~ 34 (164)
+.|.++++.. ++.+..+|++.++++..+.+.++
T Consensus 7 ~~IL~~I~~~i~~~~g~~psv~EIa~~lgvS~~TVrr~L 45 (77)
T 2jt1_A 7 TKIISIVQERQNMDDGAPVKTRDIADAAGLSIYQVRLYL 45 (77)
T ss_dssp HHHHHHHHHHHHHHTTSCEEHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCCcCHHHHHHHHCCCHHHHHHHH
Confidence 4566676666 89999999999999766555443
No 136
>1qgp_A Protein (double stranded RNA adenosine deaminase); Z-alpha-Z-DNA binding domain, RNA-editing, Z-DNA recognition, ADAR1, helix- turn-helix; NMR {Homo sapiens} SCOP: a.4.5.19
Probab=49.07 E-value=5.3 Score=23.68 Aligned_cols=32 Identities=9% Similarity=0.092 Sum_probs=25.2
Q ss_pred hhHHHHHhhcC---CCChHHHHHHhCccccccccc
Q 031190 2 QGAIQSFLSHG---NIVKSAVLQRIRLVNPMLRPV 33 (164)
Q Consensus 2 ~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~ 33 (164)
+.|..+++..+ .++..+||..+++.+.++...
T Consensus 17 ~~IL~~L~~~~~~~~~t~~eLA~~Lgvs~~tV~~~ 51 (77)
T 1qgp_A 17 QRILKFLEELGEGKATTAHDLSGKLGTPKKEINRV 51 (77)
T ss_dssp HHHHHHHHHHCSSSCEEHHHHHHHHCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCcCHHHHHHHHCcCHHHHHHH
Confidence 35667788888 899999999999977665543
No 137
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=46.09 E-value=14 Score=25.14 Aligned_cols=34 Identities=32% Similarity=0.461 Sum_probs=27.7
Q ss_pred cHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHHH
Q 031190 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115 (164)
Q Consensus 79 tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~di 115 (164)
.+.+..+.+.+.+.+.++|. .+++++|+|...|-
T Consensus 120 ~~~~~~~~la~~G~T~v~VA---~d~~l~GvIalaD~ 153 (156)
T 1svj_A 120 DVDQKVDQVARQGATPLVVV---EGSRVLGVIALKDI 153 (156)
T ss_dssp HHHHHHHHHHHTTCEEEEEE---ETTEEEEEEEEEEC
T ss_pred HHHHHHHHHHhCCCCEEEEE---ECCEEEEEEEEecC
Confidence 36777788888888888888 36899999998774
No 138
>1xmk_A Double-stranded RNA-specific adenosine deaminase; winged helix-turn-helix, RNA editing, interferon, ADAR1, hydrolase; 0.97A {Homo sapiens} SCOP: a.4.5.19
Probab=45.97 E-value=7.6 Score=23.31 Aligned_cols=32 Identities=9% Similarity=0.127 Sum_probs=26.5
Q ss_pred hHHHHHhhcCCCChHHHHHHhCcccc-cccccc
Q 031190 3 GAIQSFLSHGNIVKSAVLQRIRLVNP-MLRPVV 34 (164)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~ 34 (164)
.|..++...++.+..+|++.++++.. ..+..+
T Consensus 15 ~IL~~Lk~~g~~ta~eiA~~Lgit~~~aVr~hL 47 (79)
T 1xmk_A 15 KICDYLFNVSDSSALNLAKNIGLTKARDINAVL 47 (79)
T ss_dssp HHHHHHHHTCCEEHHHHHHHHCGGGHHHHHHHH
T ss_pred HHHHHHHHcCCcCHHHHHHHcCCCcHHHHHHHH
Confidence 56788999999999999999999877 655443
No 139
>3k2t_A LMO2511 protein; listeria monocytogenes,binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Listeria monocytogenes}
Probab=44.94 E-value=39 Score=18.82 Aligned_cols=35 Identities=14% Similarity=0.053 Sum_probs=25.7
Q ss_pred CCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEeh
Q 031190 76 TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112 (164)
Q Consensus 76 ~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~ 112 (164)
+-+|+.+|+..|...+++.+... |.+..=+.+|.+
T Consensus 11 kpmsveEAv~qmel~gh~F~vF~--n~~t~~~nVvYr 45 (57)
T 3k2t_A 11 KPMDSEEAVLQMNLLGHSFYVYT--DAETNGTNIVYS 45 (57)
T ss_dssp CCBCHHHHHHHHHHHTCSEEEEE--BSSSCCEEEEEE
T ss_pred CCCCHHHHHHHHHhCCCcEEEEE--cCCCCCEEEEEE
Confidence 56899999999999988888888 544233355554
No 140
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=43.57 E-value=20 Score=22.97 Aligned_cols=18 Identities=17% Similarity=0.211 Sum_probs=14.3
Q ss_pred eEEEEecCCCCcEEEEEehH
Q 031190 94 ALVVVKPGEQKSVAGIITER 113 (164)
Q Consensus 94 ~ipVv~~d~~~~~vGivt~~ 113 (164)
..||. +++|+++|+|...
T Consensus 105 ~~PV~--~~~g~viGvv~vg 122 (131)
T 1p0z_A 105 KSPIQ--DATGKVIGIVSVG 122 (131)
T ss_dssp EEEEE--CTTCCEEEEEEEE
T ss_pred EEeEE--CCCCCEEEEEEEE
Confidence 35898 6789999999753
No 141
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=43.19 E-value=20 Score=23.37 Aligned_cols=20 Identities=10% Similarity=0.042 Sum_probs=15.2
Q ss_pred eEEEEecCCCCcEEEEEehHHH
Q 031190 94 ALVVVKPGEQKSVAGIITERDY 115 (164)
Q Consensus 94 ~ipVv~~d~~~~~vGivt~~di 115 (164)
..||. +++|+++|+|+..--
T Consensus 110 ~~PV~--~~~g~viGvv~vg~~ 129 (142)
T 3by8_A 110 FTPIY--DENHKQIGVVAIGLE 129 (142)
T ss_dssp EEEEE--CTTSCEEEEEEEEEE
T ss_pred EEeEE--cCCCCEEEEEEEeEE
Confidence 45898 667999999886433
No 142
>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A
Probab=42.04 E-value=21 Score=21.95 Aligned_cols=29 Identities=10% Similarity=0.098 Sum_probs=23.7
Q ss_pred CCceEecCCCcHHHHHHHHHHcCCCeEEE
Q 031190 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVV 97 (164)
Q Consensus 69 ~~~~~v~~~~tl~~a~~~~~~~~~~~ipV 97 (164)
|++++++.+.-+.+|+.+...++-+.+.+
T Consensus 56 GD~itisSd~EL~eAl~l~~~n~~~~l~i 84 (89)
T 1vd2_A 56 GDPCTVSSQLELEEAFRLYELNKDSELLI 84 (89)
T ss_dssp SCCEECCSHHHHHHHHHHHHHTSCCCEEE
T ss_pred CCcccccCHHHHHHHHHHHHccCCCCEEE
Confidence 58999999999999999988877665443
No 143
>3ka5_A Ribosome-associated protein Y (PSRP-1); structural genomics, PSI-2, protein structure initiative; 1.80A {Clostridium acetobutylicum}
Probab=41.92 E-value=46 Score=19.11 Aligned_cols=36 Identities=14% Similarity=0.108 Sum_probs=26.4
Q ss_pred CCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehH
Q 031190 76 TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113 (164)
Q Consensus 76 ~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~ 113 (164)
+-+|+.+|+..|.-.+.+.+... |.+..-+.+|.++
T Consensus 11 kpMsveEAv~qmel~gh~F~vF~--n~etg~~nVVYRR 46 (65)
T 3ka5_A 11 KPMSEEEAVLEMELLGHNFFVFQ--NGDSNEVNVVYKR 46 (65)
T ss_dssp SCBCHHHHHHHHHHHTCSEEEEE--ETTTTEEEEEEEC
T ss_pred CCCCHHHHHHHHHhCCCcEEEEE--eCCCCCEEEEEEe
Confidence 56899999999999888888777 5443344566553
No 144
>3bd1_A CRO protein; transcription factor, helix-turn-helix, prophage, structural evolution, transcription; 1.40A {Xylella fastidiosa}
Probab=40.68 E-value=15 Score=21.16 Aligned_cols=32 Identities=13% Similarity=0.045 Sum_probs=24.6
Q ss_pred ChhHHHHHhhcCCCChHHHHHHhCcccccccccc
Q 031190 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVV 34 (164)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 34 (164)
|.+|..++...+ +..++++.+++++..+....
T Consensus 1 ~~~l~~~r~~~g--sq~~lA~~lgvs~~~is~~e 32 (79)
T 3bd1_A 1 MNAIDIAINKLG--SVSALAASLGVRQSAISNWR 32 (79)
T ss_dssp CCHHHHHHHHHS--SHHHHHHHHTCCHHHHHHHH
T ss_pred ChHHHHHHHHhC--CHHHHHHHHCCCHHHHHHHH
Confidence 567777777777 99999999999777665433
No 145
>4a0z_A Transcription factor FAPR; lipid homeostasis; HET: MLC; 1.90A {Staphylococcus aureus} PDB: 4a0y_A 4a0x_A* 4a12_A
Probab=39.27 E-value=14 Score=25.99 Aligned_cols=33 Identities=12% Similarity=0.006 Sum_probs=29.4
Q ss_pred hhHHHHHhhcCCCChHHHHHHhCcccccccccc
Q 031190 2 QGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVV 34 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 34 (164)
+.|.++++..+-++.++|++.++.+..++|-++
T Consensus 15 ~~i~~~l~~~~~~~~~~la~~~~vs~~TiRrDl 47 (190)
T 4a0z_A 15 EAIRQQIDSNPFITDHELSDLFQVSIQTIRLDR 47 (190)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHCCCEeHHHHHHHHCCCHHHHHHHH
Confidence 468889999999999999999999999988665
No 146
>1oyi_A Double-stranded RNA-binding protein; (alpha+beta) helix-turn-helix, viral protein; NMR {Vaccinia virus} SCOP: a.4.5.19
Probab=38.54 E-value=9.1 Score=23.21 Aligned_cols=31 Identities=10% Similarity=0.205 Sum_probs=23.9
Q ss_pred hHHHHHhhcCCCChHHHHHHhCcccccccccc
Q 031190 3 GAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVV 34 (164)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 34 (164)
.|+.+++..+ .+..+|+..+++++.+.+..+
T Consensus 21 ~IL~lL~~~g-~sa~eLAk~LgiSk~aVr~~L 51 (82)
T 1oyi_A 21 EAIKTIGIEG-ATAAQLTRQLNMEKREVNKAL 51 (82)
T ss_dssp HHHHHHSSST-EEHHHHHHHSSSCHHHHHHHH
T ss_pred HHHHHHHHcC-CCHHHHHHHHCcCHHHHHHHH
Confidence 5667777666 999999999999777765443
No 147
>2p5k_A Arginine repressor; DNA-binding domain, winged helix-turn-helix (WHTH), DNA binding protein; 1.00A {Bacillus subtilis} SCOP: a.4.5.3 PDB: 2p5l_C*
Probab=37.93 E-value=18 Score=19.80 Aligned_cols=32 Identities=3% Similarity=0.075 Sum_probs=24.1
Q ss_pred HHHHHhhcCCCChHHHHHHh-----Cccccccccccc
Q 031190 4 AIQSFLSHGNIVKSAVLQRI-----RLVNPMLRPVVS 35 (164)
Q Consensus 4 ~~~~~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~ 35 (164)
|..++...+.++.++|++.+ +++.++++-++.
T Consensus 10 i~~ll~~~~~~t~~el~~~l~~~~~~vs~~Tv~R~L~ 46 (64)
T 2p5k_A 10 IREIITSNEIETQDELVDMLKQDGYKVTQATVSRDIK 46 (64)
T ss_dssp HHHHHHHSCCCSHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHcCCCCCHHHHHHHHHHhCCCcCHHHHHHHHH
Confidence 45567777899999999999 777766665543
No 148
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=35.39 E-value=22 Score=23.52 Aligned_cols=18 Identities=17% Similarity=0.255 Sum_probs=14.3
Q ss_pred CCeEEEEecCCCCcEEEEEe
Q 031190 92 VGALVVVKPGEQKSVAGIIT 111 (164)
Q Consensus 92 ~~~ipVv~~d~~~~~vGivt 111 (164)
.+..||. |++|+++|+|.
T Consensus 108 v~~~Pi~--d~~G~~~G~ve 125 (151)
T 2qkp_A 108 VTYAAVR--DQAGDFQGVLE 125 (151)
T ss_dssp EEEEEEE--CTTCCEEEEEE
T ss_pred EEEEEEE--CCCCCEEEEEE
Confidence 3567899 77899999884
No 149
>3lyv_A Ribosome-associated factor Y; ribosomal protein S30AE family, structural genomics, PSI-2, structure initiative; 2.70A {Streptococcus pyogenes}
Probab=33.08 E-value=47 Score=19.13 Aligned_cols=36 Identities=14% Similarity=0.124 Sum_probs=25.7
Q ss_pred CCCcHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehH
Q 031190 76 TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113 (164)
Q Consensus 76 ~~~tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~ 113 (164)
+-+|+++|+..|.-.+.+.+... |.+..-+.+|.++
T Consensus 12 kpMsveEAv~qMel~gh~F~vF~--n~etg~~nVVYRR 47 (66)
T 3lyv_A 12 KPMDVEEARLQMELLGHDFFIYT--DSEDGATNILYRR 47 (66)
T ss_dssp CEECHHHHHHHHHTTTCSEEEEE--ETTTCSEEEEEEC
T ss_pred CCCCHHHHHHHHHcCCCcEEEEE--eCCCCCEEEEEEE
Confidence 46789999999999988888877 5442233565553
No 150
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=32.02 E-value=30 Score=24.71 Aligned_cols=20 Identities=25% Similarity=0.101 Sum_probs=17.4
Q ss_pred CCCeEEEEecCCCCcEEEEEeh
Q 031190 91 NVGALVVVKPGEQKSVAGIITE 112 (164)
Q Consensus 91 ~~~~ipVv~~d~~~~~vGivt~ 112 (164)
+.+.=|++ |.+|+++||++.
T Consensus 187 G~SGGPLv--~~~G~vVGI~s~ 206 (231)
T 3tjo_A 187 GNAGGPLV--NLDGEVIGINTL 206 (231)
T ss_dssp TTTTSEEE--CTTSCEEEEEEE
T ss_pred CCchhHee--cCCCeEEEEEeE
Confidence 67788999 788999999985
No 151
>3i4p_A Transcriptional regulator, ASNC family; PSI, structural genom protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens str}
Probab=31.91 E-value=23 Score=23.78 Aligned_cols=33 Identities=3% Similarity=0.115 Sum_probs=27.4
Q ss_pred hhHHHHHhhcCCCChHHHHHHhCcccccccccc
Q 031190 2 QGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVV 34 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 34 (164)
+.|+.++...++++..+|++.+++++++.+..+
T Consensus 6 ~~il~~L~~~~~~s~~~la~~lg~s~~tv~~rl 38 (162)
T 3i4p_A 6 RKILRILQEDSTLAVADLAKKVGLSTTPCWRRI 38 (162)
T ss_dssp HHHHHHHTTCSCSCHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHCCCCCHHHHHHHHCcCHHHHHHHH
Confidence 357788888999999999999999887766544
No 152
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=30.36 E-value=33 Score=23.25 Aligned_cols=23 Identities=17% Similarity=0.133 Sum_probs=19.4
Q ss_pred HHcCCCeEEEEecCCCCcEEEEEeh
Q 031190 88 TQHNVGALVVVKPGEQKSVAGIITE 112 (164)
Q Consensus 88 ~~~~~~~ipVv~~d~~~~~vGivt~ 112 (164)
...+.|.=|++ |.+|+++|+.+.
T Consensus 122 i~pGnSGGPl~--n~~G~VVGI~~~ 144 (163)
T 2w5e_A 122 TQDGMSGAPVC--DKYCRVLAVHQT 144 (163)
T ss_dssp CSSCCTTCEEE--CTTSCEEEEEEE
T ss_pred eCCCCchhhEE--cCCCEEEEEEcc
Confidence 34578999999 889999999874
No 153
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=29.44 E-value=32 Score=24.56 Aligned_cols=22 Identities=23% Similarity=0.205 Sum_probs=18.5
Q ss_pred HcCCCeEEEEecCCCCcEEEEEeh
Q 031190 89 QHNVGALVVVKPGEQKSVAGIITE 112 (164)
Q Consensus 89 ~~~~~~ipVv~~d~~~~~vGivt~ 112 (164)
..+.+.=|++ |.+|+++||++.
T Consensus 172 ~~G~SGGPlv--~~~G~vvGI~s~ 193 (237)
T 3lgi_A 172 NHGNSGGALV--NSLGELMGINTL 193 (237)
T ss_dssp CTTCTTCEEE--CTTCCEEEEECC
T ss_pred CCCCchHHee--CCCCeEEEEEee
Confidence 3467888999 788999999986
No 154
>3b73_A PHIH1 repressor-like protein; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 2.12A {Haloarcula marismortui atcc 43049}
Probab=28.13 E-value=18 Score=23.05 Aligned_cols=30 Identities=13% Similarity=0.144 Sum_probs=24.1
Q ss_pred hHHHHHhhcCCCChHHHHHHh--Ccccccccc
Q 031190 3 GAIQSFLSHGNIVKSAVLQRI--RLVNPMLRP 32 (164)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~ 32 (164)
.|+++++..++.+...|++.+ +++++.+..
T Consensus 17 ~IL~~L~~~g~~s~~eLA~~l~~giS~~aVs~ 48 (111)
T 3b73_A 17 RILEIIHEEGNGSPKELEDRDEIRISKSSVSR 48 (111)
T ss_dssp HHHHHHHHHSCBCHHHHHTSTTCCSCHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHhcCCCHHHHHH
Confidence 467788888999999999999 887766543
No 155
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=28.12 E-value=30 Score=24.87 Aligned_cols=25 Identities=16% Similarity=0.161 Sum_probs=19.8
Q ss_pred HcCCCeEEEEecCCCCcEEEEEehHHH
Q 031190 89 QHNVGALVVVKPGEQKSVAGIITERDY 115 (164)
Q Consensus 89 ~~~~~~ipVv~~d~~~~~vGivt~~di 115 (164)
+.+-|.=||+ |.+|+++||-+..+=
T Consensus 123 ~pGdSGsPVv--n~dG~VIGVHt~s~~ 147 (213)
T 3fan_A 123 ACGDSGSPVI--TEAGELVGVHTGSNK 147 (213)
T ss_dssp CCCSTTCEEE--ETTSCEEEEEEC---
T ss_pred CCCCCCCccC--CCCCcEEEEEeccCC
Confidence 4588899999 889999999999885
No 156
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=27.65 E-value=39 Score=23.99 Aligned_cols=22 Identities=9% Similarity=0.105 Sum_probs=18.5
Q ss_pred cCCCeEEEEecCCCCcEEEEEehH
Q 031190 90 HNVGALVVVKPGEQKSVAGIITER 113 (164)
Q Consensus 90 ~~~~~ipVv~~d~~~~~vGivt~~ 113 (164)
.+-+.=|++ |.+|+++||++..
T Consensus 180 ~GdSGGPLv--~~~G~vvGI~s~~ 201 (237)
T 3k6y_A 180 QGDSGGPLI--DLNGQVLGVVFGA 201 (237)
T ss_dssp TTCTTCEEE--CTTSCEEEEEEEE
T ss_pred CCccHHHEE--CCCCEEEEEEEee
Confidence 477888999 7789999999864
No 157
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=27.62 E-value=37 Score=23.61 Aligned_cols=22 Identities=14% Similarity=0.203 Sum_probs=18.0
Q ss_pred cCCCeEEEEecCCCCcEEEEEehH
Q 031190 90 HNVGALVVVKPGEQKSVAGIITER 113 (164)
Q Consensus 90 ~~~~~ipVv~~d~~~~~vGivt~~ 113 (164)
.+-|.=|++ +.+|+++|+++..
T Consensus 155 ~GdSGGPlv--~~~g~lvGI~s~g 176 (210)
T 2as9_A 155 PGNSGSPVL--NSNNEVIGVVYGG 176 (210)
T ss_dssp TTCTTCEEE--CTTSCEEEEECCS
T ss_pred CCCccCcEE--CCCCeEEEEEecc
Confidence 366788999 7679999999964
No 158
>2dbb_A Putative HTH-type transcriptional regulator PH006; ASNC family, helix-turn-helix (HTH) domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=27.42 E-value=35 Score=22.33 Aligned_cols=32 Identities=0% Similarity=0.052 Sum_probs=26.0
Q ss_pred hHHHHHhhcCCCChHHHHHHhCcccccccccc
Q 031190 3 GAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVV 34 (164)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 34 (164)
.|+.++...+.++..+|++.+++++++....+
T Consensus 13 ~il~~L~~~~~~s~~ela~~lg~s~~tv~~~l 44 (151)
T 2dbb_A 13 QLVKILSENSRLTYRELADILNTTRQRIARRI 44 (151)
T ss_dssp HHHHHHHHCTTCCHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHH
Confidence 56777888899999999999999877765443
No 159
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=27.08 E-value=40 Score=24.40 Aligned_cols=22 Identities=14% Similarity=0.083 Sum_probs=18.7
Q ss_pred cCCCeEEEEecCCCCcEEEEEehH
Q 031190 90 HNVGALVVVKPGEQKSVAGIITER 113 (164)
Q Consensus 90 ~~~~~ipVv~~d~~~~~vGivt~~ 113 (164)
.+.|.=|++ |.+|+++||++..
T Consensus 184 ~G~SGGPLv--n~~G~vVGI~s~~ 205 (245)
T 3sti_A 184 RGNSGGALL--NLNGELIGINTAI 205 (245)
T ss_dssp TTTTTSEEE--CTTSCEEEEEECC
T ss_pred CCcchhHee--cCCCeEEEEEEeE
Confidence 477888999 8889999998863
No 160
>2d4p_A Hypothetical protein TTHA1254; structural genomics, NPPSFA, national project on protein STR and functional analyses; 1.70A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 2d4o_A
Probab=26.12 E-value=26 Score=23.42 Aligned_cols=30 Identities=13% Similarity=0.197 Sum_probs=19.3
Q ss_pred cHHHHHHHHHHcCCCeEEEEecCCCCcEEEEEeh
Q 031190 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112 (164)
Q Consensus 79 tl~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~ 112 (164)
...+.++.+. +-+.++|. ..+|+++|+++.
T Consensus 23 ~~~~~L~~~~--~~~~~fVA--e~~g~ivG~v~l 52 (141)
T 2d4p_A 23 VSLGALRFFA--RTGHSFLA--EEGEEPMGFALA 52 (141)
T ss_dssp CCHHHHHHHH--HHSCCEEE--EETTEEEEEEEE
T ss_pred chHHHHHhcC--CCCeEEEE--EECCEEEEEEee
Confidence 4456777773 34556676 356999995553
No 161
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=26.04 E-value=45 Score=22.79 Aligned_cols=22 Identities=14% Similarity=0.209 Sum_probs=18.0
Q ss_pred cCCCeEEEEecCCCCcEEEEEehH
Q 031190 90 HNVGALVVVKPGEQKSVAGIITER 113 (164)
Q Consensus 90 ~~~~~ipVv~~d~~~~~vGivt~~ 113 (164)
.+-|.=|++ +.+++++||++..
T Consensus 151 ~GdSGGPl~--~~~g~lvGI~s~g 172 (200)
T 2w7s_A 151 PGNSGSPVL--NSKHELIGILYAG 172 (200)
T ss_dssp TTCTTCEEE--CTTSCEEEEEEEE
T ss_pred CCCccCeEE--CcCCEEEEEEecc
Confidence 356778999 7679999999975
No 162
>2cfx_A HTH-type transcriptional regulator LRPC; transcriptional regulation, DNA binding, FFRP; 2.4A {Bacillus subtilis} SCOP: a.4.5.32 d.58.4.2
Probab=25.41 E-value=40 Score=21.91 Aligned_cols=32 Identities=16% Similarity=0.271 Sum_probs=25.9
Q ss_pred hHHHHHhhcCCCChHHHHHHhCcccccccccc
Q 031190 3 GAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVV 34 (164)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 34 (164)
.|+.++...+..+..+|++.+++++++....+
T Consensus 9 ~il~~L~~~~~~s~~ela~~lg~s~~tv~~~l 40 (144)
T 2cfx_A 9 NIIEELKKDSRLSMRELGRKIKLSPPSVTERV 40 (144)
T ss_dssp HHHHHHHHCSCCCHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHH
Confidence 46777888889999999999999777765444
No 163
>2cg4_A Regulatory protein ASNC; DNA binding, FFRP, LRP family, transcription, DNA- binding, transcription regulation; 2.4A {Escherichia coli} SCOP: a.4.5.32 d.58.4.2
Probab=24.52 E-value=41 Score=22.00 Aligned_cols=32 Identities=6% Similarity=0.236 Sum_probs=26.0
Q ss_pred hHHHHHhhcCCCChHHHHHHhCcccccccccc
Q 031190 3 GAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVV 34 (164)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 34 (164)
.|+.++...+..+..+|++.+++++++....+
T Consensus 12 ~il~~L~~~~~~s~~ela~~lg~s~~tv~~~l 43 (152)
T 2cg4_A 12 GILEALMGNARTAYAELAKQFGVSPETIHVRV 43 (152)
T ss_dssp HHHHHHHHCTTSCHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHH
Confidence 46778888899999999999999777765443
No 164
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=24.26 E-value=38 Score=26.23 Aligned_cols=31 Identities=6% Similarity=0.109 Sum_probs=27.1
Q ss_pred hHHHHHhhcCCCChHHHHHHhCccccccccc
Q 031190 3 GAIQSFLSHGNIVKSAVLQRIRLVNPMLRPV 33 (164)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 33 (164)
.+.++++..++++..+|++.+++++++....
T Consensus 20 ~il~~l~~~~~~sr~~la~~~~ls~~tv~~~ 50 (406)
T 1z6r_A 20 AVYRLIDQLGPVSRIDLSRLAQLAPASITKI 50 (406)
T ss_dssp HHHHHHHSSCSCCHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHcCCcCHHHHHHHHCCCHHHHHHH
Confidence 4778889999999999999999999997643
No 165
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=24.23 E-value=51 Score=22.43 Aligned_cols=21 Identities=14% Similarity=0.170 Sum_probs=17.3
Q ss_pred CCCeEEEEecCCCCcEEEEEehH
Q 031190 91 NVGALVVVKPGEQKSVAGIITER 113 (164)
Q Consensus 91 ~~~~ipVv~~d~~~~~vGivt~~ 113 (164)
+-|.=|++ +.+++++||++..
T Consensus 155 GdSGGPl~--~~~g~lvGI~s~g 175 (204)
T 2vid_A 155 GNSGSPVL--NSNNELVGIHFAS 175 (204)
T ss_dssp GGTTCEEE--CTTSCEEEEEEEE
T ss_pred CCccCcEE--CCCCeEEEEEecC
Confidence 55777999 7789999999875
No 166
>2w25_A Probable transcriptional regulatory protein; transcription regulation, mutant, RV3291C, Glu104Ala, DNA-binding; 2.15A {Mycobacterium tuberculosis} PDB: 2vbw_A* 2vbx_A* 2vby_A* 2vbz_A* 2vc0_A 2vc1_A 2w24_A 2ivm_A 2w29_A 2qz8_A
Probab=23.78 E-value=45 Score=21.77 Aligned_cols=32 Identities=16% Similarity=0.176 Sum_probs=25.5
Q ss_pred hHHHHHhhcCCCChHHHHHHhCcccccccccc
Q 031190 3 GAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVV 34 (164)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 34 (164)
.|+.++...++.+..+|++.+++++++....+
T Consensus 11 ~iL~~L~~~~~~s~~ela~~lg~s~~tv~~~l 42 (150)
T 2w25_A 11 ILVRELAADGRATLSELATRAGLSVSAVQSRV 42 (150)
T ss_dssp HHHHHHHHCTTCCHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHH
Confidence 46677788889999999999999777765443
No 167
>2cyy_A Putative HTH-type transcriptional regulator PH151; structural genomics, pyrococcus horikosii OT3, NPPSFA; HET: MSE GLN; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2
Probab=23.75 E-value=45 Score=21.82 Aligned_cols=32 Identities=9% Similarity=0.141 Sum_probs=25.8
Q ss_pred hHHHHHhhcCCCChHHHHHHhCcccccccccc
Q 031190 3 GAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVV 34 (164)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 34 (164)
.|+.++...+..+..+|++.+++++++....+
T Consensus 11 ~il~~L~~~~~~s~~ela~~lg~s~~tv~~~l 42 (151)
T 2cyy_A 11 KIIKILQNDGKAPLREISKITGLAESTIHERI 42 (151)
T ss_dssp HHHHHHHHCTTCCHHHHHHHHCSCHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHH
Confidence 46777888889999999999999777765443
No 168
>2p5v_A Transcriptional regulator, LRP/ASNC family; NMB0573, structu genomics; 1.99A {Neisseria meningitidis} PDB: 2p6s_A 2p6t_A
Probab=23.31 E-value=46 Score=22.08 Aligned_cols=32 Identities=13% Similarity=0.187 Sum_probs=25.8
Q ss_pred hHHHHHhhcCCCChHHHHHHhCcccccccccc
Q 031190 3 GAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVV 34 (164)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 34 (164)
.|+.++...++++..+|++.+++++++....+
T Consensus 14 ~il~~L~~~~~~s~~ela~~lg~s~~tv~~~l 45 (162)
T 2p5v_A 14 KILQVLQENGRLTNVELSERVALSPSPCLRRL 45 (162)
T ss_dssp HHHHHHHHCTTCCHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHH
Confidence 46777888889999999999999777765443
No 169
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=23.02 E-value=53 Score=23.45 Aligned_cols=22 Identities=9% Similarity=0.092 Sum_probs=17.9
Q ss_pred cCCCeEEEEecCCCCcEEEEEehH
Q 031190 90 HNVGALVVVKPGEQKSVAGIITER 113 (164)
Q Consensus 90 ~~~~~ipVv~~d~~~~~vGivt~~ 113 (164)
.+-|.=|++ +.+|+++||++..
T Consensus 183 ~GdSGGPlv--~~~g~lvGI~s~g 204 (246)
T 1qtf_A 183 VGNSGSGIF--NLKGELIGIHSGK 204 (246)
T ss_dssp GGGTTCEEE--CTTCCEEEEEEEE
T ss_pred CCCchhheE--CCCCEEEEEEecc
Confidence 355777999 7789999999975
No 170
>3r8s_H 50S ribosomal protein L9; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_F 1p86_F 1vs8_H 1vs6_H 2aw4_H 2awb_H 2gya_F 2gyc_F 1vt2_H 2i2v_H 2j28_H 2i2t_H* 2qao_H* 2qba_H* 2qbc_H* 2qbe_H 2qbg_H 2qbi_H* 2qbk_H* 2qov_H ...
Probab=22.91 E-value=1.1e+02 Score=20.51 Aligned_cols=21 Identities=24% Similarity=0.422 Sum_probs=17.9
Q ss_pred CCCCcEEEEEehHHHHHHHHH
Q 031190 101 GEQKSVAGIITERDYLRKIIV 121 (164)
Q Consensus 101 d~~~~~vGivt~~dil~~~~~ 121 (164)
+++|++.|-||.+|+.+.+..
T Consensus 85 g~~gklfGSVt~~dIa~al~~ 105 (149)
T 3r8s_H 85 GDEGKLFGSIGTRDIADAVTA 105 (149)
T ss_dssp CTTSEEEEEECHHHHHHHHHT
T ss_pred CCCCceEcccCHHHHHHHHHH
Confidence 568999999999999887753
No 171
>1i1g_A Transcriptional regulator LRPA; helix-turn-helix, LRP/ASNC family; 2.90A {Pyrococcus furiosus} SCOP: a.4.5.32 d.58.4.2
Probab=22.65 E-value=49 Score=21.16 Aligned_cols=32 Identities=6% Similarity=0.117 Sum_probs=25.4
Q ss_pred hHHHHHhhcCCCChHHHHHHhCcccccccccc
Q 031190 3 GAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVV 34 (164)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 34 (164)
.|+..+..+++.+..+|++.+++++++....+
T Consensus 8 ~il~~L~~~~~~~~~ela~~lg~s~~tv~~~l 39 (141)
T 1i1g_A 8 IILEILEKDARTPFTEIAKKLGISETAVRKRV 39 (141)
T ss_dssp HHHHHHHHCTTCCHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHH
Confidence 45667777888999999999999877765443
No 172
>4dah_A Sporulation kinase D; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology, PAS-like fold; 2.03A {Bacillus subtilis} PDB: 4dbj_A 4dbi_A 4dak_A 3fos_A
Probab=21.89 E-value=67 Score=21.93 Aligned_cols=16 Identities=13% Similarity=0.362 Sum_probs=11.7
Q ss_pred eEEEEecCCCCcEEEEEe
Q 031190 94 ALVVVKPGEQKSVAGIIT 111 (164)
Q Consensus 94 ~ipVv~~d~~~~~vGivt 111 (164)
+.||. +.+|+++|+|.
T Consensus 129 a~pi~--~~~g~~~Gvl~ 144 (217)
T 4dah_A 129 CVPVL--DSKRNVTDYLV 144 (217)
T ss_dssp EEEEE--CTTSCEEEEEE
T ss_pred EEEEE--CCCCCEEEEEE
Confidence 45778 66788888775
No 173
>2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A
Probab=21.79 E-value=61 Score=21.82 Aligned_cols=31 Identities=23% Similarity=0.296 Sum_probs=20.4
Q ss_pred HHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHH
Q 031190 81 YDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114 (164)
Q Consensus 81 ~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~d 114 (164)
.+.+..+...+.+.++|. -+++++|++...|
T Consensus 135 ~~~~~~~~~~G~T~v~va---~dg~~~g~i~l~D 165 (165)
T 2arf_A 135 SDAMTDHEMKGQTAILVA---IDGVLCGMIAIAD 165 (165)
T ss_dssp HHHHHHHHTTTSEEEEEE---ETTEEEEEEEECC
T ss_pred HHHHHHHHhCCCeEEEEE---ECCEEEEEEEEEC
Confidence 333444555666777776 4689999998654
No 174
>1on2_A Transcriptional regulator MNTR; helix-turn-helix, DNA-binding protein, metalloregulatory protein; 1.61A {Bacillus subtilis} SCOP: a.4.5.24 a.76.1.1 PDB: 2ev0_A 1on1_A 2ev5_A 2ev6_A* 2f5c_A 2f5d_A 2f5e_A 2f5f_A 2hyf_A* 2hyg_D 3r60_A* 3r61_A*
Probab=21.71 E-value=30 Score=22.23 Aligned_cols=32 Identities=9% Similarity=0.055 Sum_probs=24.6
Q ss_pred hHHHHHhhcCCCChHHHHHHhCcccccccccc
Q 031190 3 GAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVV 34 (164)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 34 (164)
.|..+....++++..+|++.++++++++...+
T Consensus 12 ~i~~l~~~~~~~~~~ela~~l~vs~~tvs~~l 43 (142)
T 1on2_A 12 QIYMLIEEKGYARVSDIAEALAVHPSSVTKMV 43 (142)
T ss_dssp HHHHHHHHHSSCCHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHhhcCCCCHHHHHHHhCCCHHHHHHHH
Confidence 34455566788999999999999888866543
No 175
>2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A*
Probab=21.65 E-value=64 Score=22.31 Aligned_cols=32 Identities=22% Similarity=0.326 Sum_probs=21.8
Q ss_pred HHHHHHHHHHcCCCeEEEEecCCCCcEEEEEehHH
Q 031190 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114 (164)
Q Consensus 80 l~~a~~~~~~~~~~~ipVv~~d~~~~~vGivt~~d 114 (164)
+.+.+..+...+.+.+.|. -+++++|++...|
T Consensus 153 ~~~~~~~~~~~G~T~V~va---idg~l~g~iavaD 184 (185)
T 2kmv_A 153 VNDFMTEHERKGRTAVLVA---VDDELCGLIAIAD 184 (185)
T ss_dssp HHHHHHHHHHTTCEEEEEE---ETTEEEEEEEEEC
T ss_pred HHHHHHHHHhCCCeEEEEE---ECCEEEEEEEEEc
Confidence 3344455556677777776 3689999998754
No 176
>3cuo_A Uncharacterized HTH-type transcriptional regulato; DNA-binding transcriptional regulator, structural genomics, MCSG; 2.00A {Escherichia coli K12}
Probab=21.54 E-value=35 Score=20.20 Aligned_cols=29 Identities=3% Similarity=-0.064 Sum_probs=20.2
Q ss_pred HHHHHhhcCCCChHHHHHHhCcccccccc
Q 031190 4 AIQSFLSHGNIVKSAVLQRIRLVNPMLRP 32 (164)
Q Consensus 4 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 32 (164)
+...+..+++.+..+|++.++++++++..
T Consensus 29 il~~l~~~~~~s~~ela~~l~is~~tvs~ 57 (99)
T 3cuo_A 29 ILCMLSGSPGTSAGELTRITGLSASATSQ 57 (99)
T ss_dssp HHHHHTTCCSEEHHHHHHHHCCCHHHHHH
T ss_pred HHHHHHhCCCcCHHHHHHHHCcCHHHHHH
Confidence 44555556688888999988886666543
No 177
>2ia0_A Putative HTH-type transcriptional regulator PF086; ASNC, PSI, structural genomics, southeast collaboratory for structural genomics; 2.37A {Pyrococcus furiosus}
Probab=21.49 E-value=52 Score=22.26 Aligned_cols=32 Identities=3% Similarity=0.125 Sum_probs=26.2
Q ss_pred hHHHHHhhcCCCChHHHHHHhCcccccccccc
Q 031190 3 GAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVV 34 (164)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 34 (164)
.|+.++...+.++..+|++.+++++++....+
T Consensus 21 ~IL~~L~~~~~~s~~eLA~~lglS~~tv~~~l 52 (171)
T 2ia0_A 21 NILRLLKKDARLTISELSEQLKKPESTIHFRI 52 (171)
T ss_dssp HHHHHHHHCTTCCHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHH
Confidence 46777888889999999999999877766544
No 178
>2d1h_A ST1889, 109AA long hypothetical transcriptional regulator; helix-turn-helix, intermolecular and intramolecular S-S bond structural genomics; 2.05A {Sulfolobus tokodaii} SCOP: a.4.5.50
Probab=21.42 E-value=37 Score=20.29 Aligned_cols=31 Identities=6% Similarity=0.089 Sum_probs=21.4
Q ss_pred HHHHHhhcCCCChHHHHHHhCcccccccccc
Q 031190 4 AIQSFLSHGNIVKSAVLQRIRLVNPMLRPVV 34 (164)
Q Consensus 4 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 34 (164)
|..+....++++..+|++.++++++++...+
T Consensus 27 l~~l~~~~~~~t~~ela~~l~is~~tv~~~l 57 (109)
T 2d1h_A 27 LLKMVEIEKPITSEELADIFKLSKTTVENSL 57 (109)
T ss_dssp HHHHHHHCSCEEHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHcCCCCCHHHHHHHHCcCHHHHHHHH
Confidence 3344444678889999999988777655433
No 179
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=20.70 E-value=45 Score=26.11 Aligned_cols=32 Identities=9% Similarity=0.130 Sum_probs=27.4
Q ss_pred hHHHHHhhcCCCChHHHHHHhCcccccccccc
Q 031190 3 GAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVV 34 (164)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 34 (164)
.+.++++..++++..+|++.+++++++....+
T Consensus 43 ~il~~l~~~~~~sr~ela~~~gls~~tv~~~v 74 (429)
T 1z05_A 43 RVYKLIDQKGPISRIDLSKESELAPASITKIT 74 (429)
T ss_dssp HHHHHHHHHCSBCHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHcCCcCHHHHHHHHCCCHHHHHHHH
Confidence 47788899999999999999999999976433
No 180
>1sfx_A Conserved hypothetical protein AF2008; structural genomics, HTH MOT protein structure initiative, midwest center for structural genomics; 1.55A {Archaeoglobus fulgidus} SCOP: a.4.5.50
Probab=20.66 E-value=39 Score=20.10 Aligned_cols=30 Identities=17% Similarity=0.278 Sum_probs=21.2
Q ss_pred HHHHHhhcCCCChHHHHHHhCccccccccc
Q 031190 4 AIQSFLSHGNIVKSAVLQRIRLVNPMLRPV 33 (164)
Q Consensus 4 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 33 (164)
+...+...++++..+|++.++++++++...
T Consensus 25 il~~l~~~~~~s~~ela~~l~is~~tv~~~ 54 (109)
T 1sfx_A 25 IYSLLLERGGMRVSEIARELDLSARFVRDR 54 (109)
T ss_dssp HHHHHHHHCCBCHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHCCCHHHHHHH
Confidence 445555667888888998888877665543
No 181
>1y0u_A Arsenical resistance operon repressor, putative; structural genomics, protein structure initiative, PSI; HET: MSE; 1.60A {Archaeoglobus fulgidus} SCOP: a.4.5.5
Probab=20.57 E-value=51 Score=19.64 Aligned_cols=29 Identities=10% Similarity=0.179 Sum_probs=20.6
Q ss_pred HHHHHhhcCCCChHHHHHHhCcccccccccc
Q 031190 4 AIQSFLSHGNIVKSAVLQRIRLVNPMLRPVV 34 (164)
Q Consensus 4 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 34 (164)
|..++ .++.+..+|++.++++++++...+
T Consensus 36 Il~~L--~~~~~~~eLa~~l~is~~tv~~~L 64 (96)
T 1y0u_A 36 ILRML--DKGRSEEEIMQTLSLSKKQLDYHL 64 (96)
T ss_dssp HHHHH--HTTCCHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHH--cCCCCHHHHHHHHCcCHHHHHHHH
Confidence 44455 577888999999888777765433
No 182
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=20.52 E-value=62 Score=22.87 Aligned_cols=22 Identities=9% Similarity=0.167 Sum_probs=17.5
Q ss_pred cCCCeEEEEecCCCCcEEEEEehH
Q 031190 90 HNVGALVVVKPGEQKSVAGIITER 113 (164)
Q Consensus 90 ~~~~~ipVv~~d~~~~~vGivt~~ 113 (164)
.+-|.=|++ +.+|+++||++..
T Consensus 192 ~GdSGGPl~--~~~g~lvGI~s~g 213 (242)
T 1agj_A 192 PGNSGSGIF--NSNGELVGIHSSK 213 (242)
T ss_dssp GGGTTCEEE--CTTSEEEEEEEEE
T ss_pred CCCCchHhc--ccCCEEEEEEecc
Confidence 355777999 7789999999974
No 183
>1bia_A BIRA bifunctional protein; transcription regulation; 2.30A {Escherichia coli} SCOP: a.4.5.1 b.34.1.1 d.104.1.2 PDB: 1bib_A* 1hxd_A* 2ewn_A*
Probab=20.12 E-value=37 Score=25.67 Aligned_cols=32 Identities=3% Similarity=-0.023 Sum_probs=26.3
Q ss_pred hHHHHHhhcCCCChHHHHHHhCcccccccccc
Q 031190 3 GAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVV 34 (164)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 34 (164)
.|.+++..++.+++.+|++.+++++.+++.++
T Consensus 9 ~Il~~L~~~~~~s~~eLa~~l~vS~~ti~r~l 40 (321)
T 1bia_A 9 KLIALLANGEFHSGEQLGETLGMSRAAINKHI 40 (321)
T ss_dssp HHHHHHTTSSCBCHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHcCCCcCHHHHHHHHCCCHHHHHHHH
Confidence 46677777778999999999999999976544
Done!