BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031193
MEAGSNGEEPTSWDELYSINLMPSELFLKFRKEIEGFRVGVNLEFYNAPVNEYQAKIILK
PLSPNRPWKFIYEPIHQDVRILSKKIPVTKFLNLQVGIGHNFQLHATGWKWKLTTCLVEM
EYPGSGIRHLWACVLGWIFDLVGGQIMFFQRLLGKFFDLLCSYQ

High Scoring Gene Products

Symbol, full name Information P value
ORG4
AT2G06010 		protein from Arabidopsis thaliana 2.6e-47

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031193
        (164 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2051582 - symbol:ORG4 "AT2G06010" species:3702...   495  2.6e-47   1


>TAIR|locus:2051582 [details] [associations]
            symbol:ORG4 "AT2G06010" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0009751 "response to salicylic acid
            stimulus" evidence=IEP] [GO:0009536 "plastid" evidence=IDA]
            GO:GO:0009536 EMBL:CP002685 GO:GO:0009751 EMBL:AC006413
            EMBL:AY072356 EMBL:AY114726 IPI:IPI00522093 PIR:B84474
            RefSeq:NP_565333.1 UniGene:At.41121 STRING:Q8VY85 PRIDE:Q8VY85
            DNASU:815155 EnsemblPlants:AT2G06010.1 GeneID:815155
            KEGG:ath:AT2G06010 TAIR:At2g06010 HOGENOM:HOG000240833
            InParanoid:Q8VY85 OMA:WKFIYEP PhylomeDB:Q8VY85
            ProtClustDB:CLSN2688005 ArrayExpress:Q8VY85 Genevestigator:Q8VY85
            Uniprot:Q8VY85
        Length = 188

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 85/113 (75%), Positives = 100/113 (88%)

Query:     5 SNGEEPTSWDELYSINLMPSELFLKFRKEIEGFRVGVNLEFYNAPVNEYQAKIILKPLSP 64
             S  EEP SW++LY INLMPSELFLKFRKE++G RVGVNLE YN P N+Y AK++LKPL P
Sbjct:     6 SRPEEPPSWEDLYKINLMPSELFLKFRKELQGLRVGVNLELYNEPTNDYHAKLVLKPLCP 65

Query:    65 NRPWKFIYEPIHQDVRILSKKIPVTKFLNLQVGIGHNFQLHATGWKWKLTTCL 117
              R WKFIYEP+HQ+VR+LSKKIPVT+FLNLQVG+GHNFQ++A GWKWKLT+CL
Sbjct:    66 ERKWKFIYEPLHQEVRVLSKKIPVTRFLNLQVGVGHNFQMNAIGWKWKLTSCL 118


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.143   0.470    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      164       164   0.00088  107 3  11 22  0.48    31
                                                     30  0.45    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  608 (65 KB)
  Total size of DFA:  177 KB (2102 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.62u 0.18s 15.80t   Elapsed:  00:00:01
  Total cpu time:  15.62u 0.18s 15.80t   Elapsed:  00:00:01
  Start:  Fri May 10 15:18:28 2013   End:  Fri May 10 15:18:29 2013

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