Query 031193
Match_columns 164
No_of_seqs 16 out of 18
Neff 2.2
Searched_HMMs 13730
Date Mon Mar 25 16:48:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031193.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031193hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2vgna1 b.38.4.1 (A:1-135) Dom 31.4 26 0.0019 24.3 4.1 42 69-110 71-123 (135)
2 d1lshb_ f.7.1.1 (B:) Lipovitel 29.3 19 0.0014 26.9 3.1 85 32-133 16-102 (174)
3 d3cnwa1 d.129.3.8 (A:3-140) Un 20.8 93 0.0068 19.5 5.1 40 39-78 70-113 (138)
4 d1o6aa_ b.139.1.1 (A:) Putativ 20.0 5.4 0.00039 25.4 -1.4 24 74-97 11-34 (87)
5 d1e2wa2 b.84.2.2 (A:169-232) C 19.6 62 0.0045 19.7 3.8 49 45-96 2-50 (64)
6 d2fug71 d.82.2.2 (7:3-129) NAD 18.1 24 0.0017 25.5 1.6 32 56-90 79-110 (127)
7 d1rp1a1 b.12.1.2 (A:337-449) P 14.8 94 0.0069 19.9 4.0 39 71-111 39-78 (113)
8 d2i9xa1 d.366.1.1 (A:1-84) Put 12.3 24 0.0017 23.3 0.3 17 64-80 53-69 (84)
9 d1sv6a_ d.177.1.1 (A:) 2-keto- 11.7 36 0.0026 23.9 1.1 33 10-42 32-64 (261)
10 d2duya1 a.60.2.7 (A:11-75) Unc 11.4 63 0.0046 19.4 2.1 25 10-34 39-63 (65)
No 1
>d2vgna1 b.38.4.1 (A:1-135) Dom34 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=31.37 E-value=26 Score=24.31 Aligned_cols=42 Identities=14% Similarity=0.254 Sum_probs=34.3
Q ss_pred eEEEeecCCceeEEee-----------cccceeeeeeeeecceeeeeccccce
Q 031193 69 KFIYEPIHQDVRILSK-----------KIPVTKFLNLQVGIGHNFQLHATGWK 110 (164)
Q Consensus 69 K~iyEP~~~DvrilsK-----------KIPv~~fLnlQvGIGH~F~~~~tGWk 110 (164)
+..|.|....+||--+ .+|+|+|-.|.+.+|..|..-...|.
T Consensus 71 ~~ef~~~~~~LRi~G~iv~e~~~~~n~~v~~Gs~HTl~v~~~~~itI~K~~Wd 123 (135)
T d2vgna1 71 SEDFDMKDEYLKYKGVTVTDESGASNVDIPVGKYLSFTLDYVYPFTIIKQNFN 123 (135)
T ss_dssp EEEEETTTTEEEEEEEECCCTTSSSSTTCCTTCEEEEECCSSSCEEEEESCCC
T ss_pred EEEeecCCCEEEEeeeEEecccccccccccccCcEEEEEcCCCeEEEEECCCC
Confidence 4567777777887654 58899999999999999999887775
No 2
>d1lshb_ f.7.1.1 (B:) Lipovitellin-phosvitin complex; beta-sheet shell regions {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]}
Probab=29.34 E-value=19 Score=26.87 Aligned_cols=85 Identities=21% Similarity=0.303 Sum_probs=53.4
Q ss_pred eeecceEEEeeeEEecCCCcc-eeeEEEeecCCCCCCceEEEeecCCceeEEee-cccceeeeeeeeecceeeeeccccc
Q 031193 32 KEIEGFRVGVNLEFYNAPVNE-YQAKIILKPLSPNRPWKFIYEPIHQDVRILSK-KIPVTKFLNLQVGIGHNFQLHATGW 109 (164)
Q Consensus 32 kevqG~rvG~NfEf~n~~~nd-~~aKlVlKPl~~~~kWK~iyEP~~~DvrilsK-KIPv~~fLnlQvGIGH~F~~~~tGW 109 (164)
+..||+|+.+=++- +++. -++.+++..++++..||.- -|--++|| |.- --++-|-+-|.-.+-
T Consensus 16 ~k~~GYQ~a~Y~d~---~~~~~~rvQiIvs~l~e~~nWK~C-----aD~~lls~hKv~------Aki~WG~eCq~Y~~~- 80 (174)
T d1lshb_ 16 GKQQGLQTTLYYGL---TSNGLPKAKIVAVELSDLSVWKLC-----AKFRLSAHMKAK------AAIGWGKNCQQYRAM- 80 (174)
T ss_dssp CCCCEEEEEEEEEC---HHHHCCEEEEEEEESCTTCCCEEE-----EEEECCSSSEEE------EEEEESSSSCSEEEE-
T ss_pred CCccceEEEEEecC---CccCccceEEEEEEecCCCCeeEE-----eeeeccccccee------EEEeccccccceeEE-
Confidence 67899999886553 3443 3789999999999999964 36677775 321 123444433332221
Q ss_pred eeeEeeeeccccccCcccceeeee
Q 031193 110 KWKLTTCLVEMEYPGSGIRHLWAC 133 (164)
Q Consensus 110 kWKltt~lG~~ifPG~d~r~gW~a 133 (164)
=+.+|-+= +-.|-..+++-|.-
T Consensus 81 -~~aeTG~~-g~~PA~r~kv~W~r 102 (174)
T d1lshb_ 81 -LEASTGNL-QSHPAARVDIKWGR 102 (174)
T ss_dssp -EEEEEEES-SSSEEEEEEEEECC
T ss_pred -EEEeeccc-CCCcceEEEEeccc
Confidence 11223221 46899999999975
No 3
>d3cnwa1 d.129.3.8 (A:3-140) Uncharacterized protein XoxI {Bacillus cereus [TaxId: 1396]}
Probab=20.77 E-value=93 Score=19.45 Aligned_cols=40 Identities=18% Similarity=0.311 Sum_probs=27.6
Q ss_pred EEeeeEEecCCCcceeeEEEeecCCCCC----CceEEEeecCCc
Q 031193 39 VGVNLEFYNAPVNEYQAKIILKPLSPNR----PWKFIYEPIHQD 78 (164)
Q Consensus 39 vG~NfEf~n~~~nd~~aKlVlKPl~~~~----kWK~iyEP~~~D 78 (164)
+...+.--+.|...|.+.+.|.|.+... .|...|+|...+
T Consensus 70 ~~y~~~~~~~p~~~~~~~~~l~p~~~g~~t~v~w~~~f~p~~~~ 113 (138)
T d3cnwa1 70 YTYSIMNAPFPVTNYLSTIQVKEGTESNTSLVEWSGTFTPVEVS 113 (138)
T ss_dssp EEEEEEECSSSEEEEEEEEEEEECSSTTCEEEEEEEEEEESSSC
T ss_pred EEEEEecCCCcceeeEEEEEEEECCCCCeEEEEEEEEEecCCCC
Confidence 3333334456778899999999986422 688889886544
No 4
>d1o6aa_ b.139.1.1 (A:) Putative flagelar motor switch protein FliN {Thermotoga maritima [TaxId: 2336]}
Probab=20.00 E-value=5.4 Score=25.41 Aligned_cols=24 Identities=17% Similarity=0.445 Sum_probs=19.2
Q ss_pred ecCCceeEEeecccceeeeeeeee
Q 031193 74 PIHQDVRILSKKIPVTKFLNLQVG 97 (164)
Q Consensus 74 P~~~DvrilsKKIPv~~fLnlQvG 97 (164)
|..=.+++=+.++|++.+++||+|
T Consensus 11 pv~l~~~Lg~~~l~l~el~~L~~G 34 (87)
T d1o6aa_ 11 PLKVTVELGRTRMTLKRVLEMIHG 34 (87)
T ss_dssp EEEEEEEEEEEEEEHHHHHHCCTT
T ss_pred cEEEEEEEeeeEeeHHHHhCCCCC
Confidence 444567788899999999999965
No 5
>d1e2wa2 b.84.2.2 (A:169-232) Cytochrome f, small domain {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=19.59 E-value=62 Score=19.68 Aligned_cols=49 Identities=20% Similarity=0.173 Sum_probs=32.7
Q ss_pred EecCCCcceeeEEEeecCCCCCCceEEEeecCCceeEEeecccceeeeeeee
Q 031193 45 FYNAPVNEYQAKIILKPLSPNRPWKFIYEPIHQDVRILSKKIPVTKFLNLQV 96 (164)
Q Consensus 45 f~n~~~nd~~aKlVlKPl~~~~kWK~iyEP~~~DvrilsKKIPv~~fLnlQv 96 (164)
.||++...--.+|..-+- ...+=+++.++.+++.+ +-.||.++-|..+-
T Consensus 2 ~~na~~aG~Vs~I~~~~~-~kg~~~I~I~~~dGe~~--~y~Ip~g~~l~V~e 50 (64)
T d1e2wa2 2 IYNASAAGKIVAITALSE-KKGGFEVSIEKANGEVV--VDKIPAGPDLIVKE 50 (64)
T ss_dssp CCBCSSCEEEEEEEESSS-SSCCEEEEEECTTSCEE--EEEECSSSCBCCCT
T ss_pred eecCcCCEEEEEEEeecc-cCCcEEEEEECCCCCEE--EEEcCCCCeEEECC
Confidence 467777665555533221 23345799999998754 67999998887653
No 6
>d2fug71 d.82.2.2 (7:3-129) NADH-quinone oxidoreductase subunit 15, Nqo15 {Thermus thermophilus [TaxId: 274]}
Probab=18.11 E-value=24 Score=25.54 Aligned_cols=32 Identities=31% Similarity=0.406 Sum_probs=26.8
Q ss_pred EEEeecCCCCCCceEEEeecCCceeEEeeccccee
Q 031193 56 KIILKPLSPNRPWKFIYEPIHQDVRILSKKIPVTK 90 (164)
Q Consensus 56 KlVlKPl~~~~kWK~iyEP~~~DvrilsKKIPv~~ 90 (164)
.|++.|...--.||..++|-.| ++..|+|+|+
T Consensus 79 ~I~lr~~g~h~h~hlh~~~G~G---LvegKrPfTr 110 (127)
T d2fug71 79 RIGLRLPRAHIHLHAHYEPGKG---LVTGKIPLTK 110 (127)
T ss_dssp CEEEEETTTTEEEEEEEETTTE---EESSSSBCCH
T ss_pred eeEEecCCchhheeeeecCCCc---eeeccCcccH
Confidence 3789999999999999999555 4469999986
No 7
>d1rp1a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Dog (Canis familiaris) [TaxId: 9615]}
Probab=14.78 E-value=94 Score=19.88 Aligned_cols=39 Identities=15% Similarity=0.148 Sum_probs=29.5
Q ss_pred EEeecCCceeEEeecccceeeeeeeeecceeeeeccccc-ee
Q 031193 71 IYEPIHQDVRILSKKIPVTKFLNLQVGIGHNFQLHATGW-KW 111 (164)
Q Consensus 71 iyEP~~~DvrilsKKIPv~~fLnlQvGIGH~F~~~~tGW-kW 111 (164)
.+||-+-|.-+++-...+|+...+. |+||-.--..+| +|
T Consensus 39 ~f~~g~~~~f~i~~~~~lG~l~~v~--i~hdn~g~~~~w~~~ 78 (113)
T d1rp1a1 39 ILKPGSTHSNEFDAKLDVGTIEKVK--FLWNNNVVNPTFPKV 78 (113)
T ss_dssp EECTTCEEEEEEEESSCCSSEEEEE--EEEEEC--CTTCCCE
T ss_pred eEcCCCEEEEEEEeCCCCCCcEEEE--EEECCCCCCCccccc
Confidence 4899999999999889999988766 668765555556 44
No 8
>d2i9xa1 d.366.1.1 (A:1-84) Putative septation protein SpoVG {Staphylococcus epidermidis [TaxId: 1282]}
Probab=12.27 E-value=24 Score=23.28 Aligned_cols=17 Identities=35% Similarity=0.712 Sum_probs=14.7
Q ss_pred CCCCceEEEeecCCcee
Q 031193 64 PNRPWKFIYEPIHQDVR 80 (164)
Q Consensus 64 ~~~kWK~iyEP~~~Dvr 80 (164)
++..||-||.|++.+.|
T Consensus 53 ~~g~y~Di~~Pi~~e~R 69 (84)
T d2i9xa1 53 PDGEFRDIAHPINSDMR 69 (84)
T ss_dssp TTSCEEECEEECSHHHH
T ss_pred CCCCEEEEEEECCHHHH
Confidence 57779999999998876
No 9
>d1sv6a_ d.177.1.1 (A:) 2-keto-4-pentenoate hydratase MhpD {Escherichia coli [TaxId: 562]}
Probab=11.71 E-value=36 Score=23.91 Aligned_cols=33 Identities=15% Similarity=0.247 Sum_probs=23.2
Q ss_pred CCChhhhhcccccchhhhhhhheeecceEEEee
Q 031193 10 PTSWDELYSINLMPSELFLKFRKEIEGFRVGVN 42 (164)
Q Consensus 10 p~sw~ElY~inlmP~El~lKFRkevqG~rvG~N 42 (164)
|.|++|-|.|--.=-++++.--.++-||++|+-
T Consensus 32 ~~~~~~AY~iQ~~~~~~~~~~g~~~~G~Kig~t 64 (261)
T d1sv6a_ 32 IDNAEAAYAIQHINVQHDVAQGRRVVGRKVGLT 64 (261)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTTCCEEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCccccceeecc
Confidence 568999999864323444444468999999973
No 10
>d2duya1 a.60.2.7 (A:11-75) Uncharacterized protein TTHA1967 {Thermus thermophilus [TaxId: 274]}
Probab=11.44 E-value=63 Score=19.43 Aligned_cols=25 Identities=8% Similarity=0.159 Sum_probs=20.5
Q ss_pred CCChhhhhcccccchhhhhhhheee
Q 031193 10 PTSWDELYSINLMPSELFLKFRKEI 34 (164)
Q Consensus 10 p~sw~ElY~inlmP~El~lKFRkev 34 (164)
=.|++||..+.-+++..+-|++.-+
T Consensus 39 f~s~edL~~v~gi~~~~~~~i~~~l 63 (65)
T d2duya1 39 YARVEDLLKVKGIGPATLERLRPYL 63 (65)
T ss_dssp CSSGGGGGGSTTCCHHHHHHHGGGE
T ss_pred CCCHHHHHhCCCCCHHHHHHHHHHc
Confidence 3689999999999888888887654
Done!