BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031195
(164 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein OS=Arabidopsis thaliana
GN=At3g01520 PE=1 SV=2
Length = 175
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 14 SPSSKFALSWAVNNLLDKGDT------LYIIHINPNSLDESRNLMWAKSGSPLIPLTEFR 67
S S K A W + ++ + L++ ++ + D+ ++ SP +FR
Sbjct: 24 SISCKRAFEWTLEKIVRSNTSDFKILLLHVQVVDEDGFDDVDSIY----ASP----EDFR 75
Query: 68 EPETMEKYNVKTDIDALDLLDTASRQKEANIVAKIYWGDARERLLEAIEDLKLDSLVMGS 127
+ M + N + L+ + A I GD ++ + + ++ ++ D LV+GS
Sbjct: 76 D---MRQSNKAKGLHLLEFFVNKCHEIGVGCEAWIKTGDPKDVICQEVKRVRPDFLVVGS 132
Query: 128 RGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
RGLG +++ +G+VS + + HA CPV +K
Sbjct: 133 RGLGRFQKVFVGTVSAFCVKHAECPVMTIK 162
>sp|P87132|YFK5_SCHPO Uncharacterized protein C167.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC167.05 PE=1 SV=2
Length = 601
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 22/153 (14%)
Query: 9 VALDFSPSSKFALSWAVNNLLDKGDTLYIIHI----NPNSLDESRNLMWAKSGSPLIPLT 64
+ LD S S A WAV LL GDTL I+ + +P S +
Sbjct: 435 LTLDLSSESLHAAEWAVGILLRNGDTLIIVDVIECDDP-------------SARAVKDRM 481
Query: 65 EFREPETMEKYNVKTDIDALDLLDTASRQKEANIVAKIYWGDARERLLEAIEDLKLDSLV 124
E + ET+EK L LL + E NI I+ A+ ++E I+ ++ +V
Sbjct: 482 ESEQLETLEKITKYI----LKLLSKTVLEVEVNIEV-IHHEKAKHLIIEMIDYIEPSLVV 536
Query: 125 MGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
MGSRG ++ ++LGS SNY++ + PV + +
Sbjct: 537 MGSRGRSHLKGVLLGSFSNYLVNKSSVPVMVAR 569
>sp|P74897|YQA3_THEAQ Universal stress protein in QAH/OAS sulfhydrylase 3'region
OS=Thermus aquaticus PE=3 SV=1
Length = 137
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 100 AKIYWGDARERLLEAIEDLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
A + G E +L+A K D +VMG+RGLG V + LGS S V+ APCPV +V+
Sbjct: 80 ALLLQGRPAEAILQAAIGEKADLIVMGTRGLGAVGSLFLGSQSQKVVAEAPCPVLLVR 137
>sp|Q57951|Y531_METJA Universal stress protein MJ0531 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0531 PE=3 SV=1
Length = 170
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 110 RLLEAIEDLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVKDP 159
++E E K D +VMG+ G + RI+LGSV+ V+ +A CPV +VK P
Sbjct: 118 EIVEFAEKKKADLIVMGTTGKTGLERILLGSVAERVIKNAHCPVLVVKKP 167
>sp|Q4L751|Y1215_STAHJ Putative universal stress protein SH1215 OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=SH1215 PE=3 SV=1
Length = 165
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 88 DTASRQKEANIVAKIYWGDARERLLEAI-EDLKLDSLVMGSRGLGTVRRIILGSVSNYVM 146
+ A+R N+ ++ +G + + + + +L +D ++ G+ GL V R I+GSVS ++
Sbjct: 73 EVATRAGVTNVETRLEFGSPKAIIPKKLASELGVDLIMCGTSGLNAVERFIVGSVSEAIV 132
Query: 147 THAPCPVTIVK 157
HAPC V +V+
Sbjct: 133 RHAPCDVLVVR 143
>sp|P42297|YXIE_BACSU Universal stress protein YxiE OS=Bacillus subtilis (strain 168)
GN=yxiE PE=3 SV=1
Length = 148
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 6 KIGVALDFSPSSKFALSWAVNNLLDKGDTLYIIHINPNSLDESRNLMWAKSGSPLIPLTE 65
K+ VA+D S S AL AV+ ++ L I+H+ ++ + +L +G +P
Sbjct: 4 KMLVAIDGSDMSAKALDAAVHLAKEQQAELSILHVGREAVVTTSSL----TGIVYVP--- 56
Query: 66 FREPETMEKYNVKTDIDALDLLDTA-SRQKEANIVAKIYW--GDARERLLEAIEDLKLDS 122
+++ + + L +L+ A + E + A+ + G+ +L ++ +
Sbjct: 57 ---EHFIDEIRNEVKKEGLKILENAKEKAAEKGVQAETIYANGEPAHEILNHAKEKGVSL 113
Query: 123 LVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
+V+GSRG+ ++ ++LGSVS+ V + CPV IV+
Sbjct: 114 IVVGSRGISGLKEMMLGSVSHKVSQLSTCPVLIVR 148
>sp|P0A5F8|Y2019_MYCBO Universal stress protein Mb2019 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=Mb2019 PE=3 SV=1
Length = 317
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 19/159 (11%)
Query: 7 IGVALDFSPSSKFALSWAVNNLLDKGDTLYIIHINPNSLDESRNLMWAKSGSPLIPLTEF 66
I V +D SP S A+ WA + + L ++ + P + WA + F
Sbjct: 10 IVVGVDGSPCSHTAVEWAARDAQMRNVALRVVQVVPPVITAPEG--WA------FEYSRF 61
Query: 67 REPETME----KYNVKTDIDALD-----LLDTASRQKEANIVAKIYWGDARERLLEAIED 117
+E + E Y V ++ L+ +S + A I ++ G L
Sbjct: 62 QEAQKREIVEHSYLVAQAHQIVEQAHKVALEASSSGRAAQITGEVLHGQIVPTLANISRQ 121
Query: 118 LKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIV 156
+ + +V+G RG G V +LGSVS+ ++ HA PV ++
Sbjct: 122 VAM--VVLGYRGQGAVAGALLGSVSSSLVRHAHGPVAVI 158
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 110 RLLEAIEDLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVKDPS 160
RLLE + +L +V+GS G G + LGSVS V+ PV + + P
Sbjct: 263 RLLELAQTAQL--VVVGSHGRGGFPGMHLGSVSRAVVNSGQAPVIVARIPQ 311
>sp|P0A5F7|Y1996_MYCTU Universal stress protein Rv1996/MT2052 OS=Mycobacterium
tuberculosis GN=Rv1996 PE=1 SV=1
Length = 317
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 19/159 (11%)
Query: 7 IGVALDFSPSSKFALSWAVNNLLDKGDTLYIIHINPNSLDESRNLMWAKSGSPLIPLTEF 66
I V +D SP S A+ WA + + L ++ + P + WA + F
Sbjct: 10 IVVGVDGSPCSHTAVEWAARDAQMRNVALRVVQVVPPVITAPEG--WA------FEYSRF 61
Query: 67 REPETME----KYNVKTDIDALD-----LLDTASRQKEANIVAKIYWGDARERLLEAIED 117
+E + E Y V ++ L+ +S + A I ++ G L
Sbjct: 62 QEAQKREIVEHSYLVAQAHQIVEQAHKVALEASSSGRAAQITGEVLHGQIVPTLANISRQ 121
Query: 118 LKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIV 156
+ + +V+G RG G V +LGSVS+ ++ HA PV ++
Sbjct: 122 VAM--VVLGYRGQGAVAGALLGSVSSSLVRHAHGPVAVI 158
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 110 RLLEAIEDLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVKDPS 160
RLLE + +L +V+GS G G + LGSVS V+ PV + + P
Sbjct: 263 RLLELAQTAQL--VVVGSHGRGGFPGMHLGSVSRAVVNSGQAPVIVARIPQ 311
>sp|Q8CS61|Y1385_STAES Putative universal stress protein SE_1385 OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=SE_1385 PE=3 SV=1
Length = 166
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 117 DLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
D+ D ++ G+ GL V R I+GSVS ++ HAPC V +V+
Sbjct: 103 DVGADLIMSGTSGLNAVERFIVGSVSEAIVRHAPCDVLVVR 143
>sp|Q5HNJ5|Y1273_STAEQ Putative universal stress protein SERP1273 OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=SERP1273 PE=3
SV=1
Length = 166
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 117 DLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
D+ D ++ G+ GL V R I+GSVS ++ HAPC V +V+
Sbjct: 103 DVGADLIMSGTSGLNAVERFIVGSVSEAIVRHAPCDVLVVR 143
>sp|Q49YE0|Y1056_STAS1 Putative universal stress protein SSP1056 OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=SSP1056 PE=3 SV=1
Length = 167
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 117 DLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
D+ D ++ G+ GL V R I+GSVS ++ H+PC V +V+
Sbjct: 103 DVDADLIMCGTSGLNAVERFIVGSVSEAIVRHSPCDVLVVR 143
>sp|O53472|Y2026_MYCTU Universal stress protein Rv2026c/MT2085 OS=Mycobacterium
tuberculosis GN=Rv2026c PE=2 SV=1
Length = 294
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 123 LVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVKD 158
+V+GS+G+G + R++LGS+S ++ HA CPV I+
Sbjct: 114 MVVGSQGMGALGRLLLGSISTALLHHARCPVAIIHS 149
Score = 30.0 bits (66), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 111 LLEAIEDLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
LLE E +L +V+GS G G ++LGSVS+ V PV +V+
Sbjct: 248 LLEHSEQAQL--VVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVR 292
>sp|Q2FXL6|Y1819_STAA8 Putative universal stress protein SAOUHSC_01819 OS=Staphylococcus
aureus (strain NCTC 8325) GN=SAOUHSC_01819 PE=3 SV=1
Length = 166
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 117 DLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
++ D ++ G+ GL V R I+GSVS ++ HAPC V +V+
Sbjct: 103 EINADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q6GFZ7|Y1788_STAAR Putative universal stress protein SAR1788 OS=Staphylococcus aureus
(strain MRSA252) GN=SAR1788 PE=3 SV=1
Length = 166
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 117 DLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
++ D ++ G+ GL V R I+GSVS ++ HAPC V +V+
Sbjct: 103 EINADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q5HF64|Y1759_STAAC Putative universal stress protein SACOL1759 OS=Staphylococcus
aureus (strain COL) GN=SACOL1759 PE=3 SV=1
Length = 166
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 117 DLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
++ D ++ G+ GL V R I+GSVS ++ HAPC V +V+
Sbjct: 103 EINADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q99TF3|Y1710_STAAM Putative universal stress protein SAV1710 OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=SAV1710 PE=1 SV=1
Length = 166
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 117 DLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
++ D ++ G+ GL V R I+GSVS ++ HAPC V +V+
Sbjct: 103 EINADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q2FG28|Y1656_STAA3 Putative universal stress protein SAUSA300_1656 OS=Staphylococcus
aureus (strain USA300) GN=SAUSA300_1656 PE=3 SV=1
Length = 166
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 117 DLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
++ D ++ G+ GL V R I+GSVS ++ HAPC V +V+
Sbjct: 103 EINADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q7A0N0|Y1653_STAAW Putative universal stress protein MW1653 OS=Staphylococcus aureus
(strain MW2) GN=MW1653 PE=3 SV=1
Length = 166
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 117 DLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
++ D ++ G+ GL V R I+GSVS ++ HAPC V +V+
Sbjct: 103 EINADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q6G8L7|Y1637_STAAS Putative universal stress protein SAS1637 OS=Staphylococcus aureus
(strain MSSA476) GN=SAS1637 PE=3 SV=1
Length = 166
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 117 DLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
++ D ++ G+ GL V R I+GSVS ++ HAPC V +V+
Sbjct: 103 EINADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q2YTD0|Y1569_STAAB Putative universal stress protein SAB1569 OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=SAB1569 PE=3 SV=1
Length = 166
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 117 DLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
++ D ++ G+ GL V R I+GSVS ++ HAPC V +V+
Sbjct: 103 EINADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVR 143
>sp|Q7A551|Y1532_STAAN Putative universal stress protein SA1532 OS=Staphylococcus aureus
(strain N315) GN=SA1532 PE=1 SV=1
Length = 166
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 117 DLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
++ D ++ G+ GL V R I+GSVS ++ HAPC V +V+
Sbjct: 103 EINADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVR 143
>sp|P74148|Y1388_SYNY3 Universal stress protein Sll1388 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1388 PE=3 SV=1
Length = 154
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 121 DSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
D +V+G RGL + + LGSVS+YV+ H C V IV+
Sbjct: 117 DLVVLGRRGLKGLAEVFLGSVSSYVIHHVQCSVLIVQ 153
>sp|P72745|Y1101_SYNY3 Universal stress protein Slr1101 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr1101 PE=3 SV=1
Length = 108
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 121 DSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVKDP 159
D +V+G RG + I+LGSV NYV HA C V +V P
Sbjct: 69 DIIVVGHRGRWGLSEILLGSVGNYVFHHAHCCVFVVPTP 107
>sp|O06189|Y2623_MYCTU Universal stress protein Rv2623/MT2698 OS=Mycobacterium
tuberculosis GN=Rv2623 PE=1 SV=1
Length = 297
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 2 AGDRKIG--VALDFSPSSKFALSWAVNNLLDKGDTLYIIH-INPNSLDESRNLMWAKSGS 58
+G+ +G V +D SP+++ A+ WA + + L ++H ++P W +
Sbjct: 3 SGNSSLGIIVGIDDSPAAQVAVRWAARDAELRKIPLTLVHAVSPEVA------TWLEV-- 54
Query: 59 PLIPLTEFREPETMEKYNVKTDIDALDLLDTAS-RQKEANIVAKIYWGDARERLLEAIED 117
PL P R + ++ + DAL +++ AS R + ++I A L++ +D
Sbjct: 55 PLPPGV-LRWQQDHGRHLID---DALKVVEQASLRAGPPTVHSEIVPAAAVPTLVDMSKD 110
Query: 118 LKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVKD 158
L +V+G G G +LGSVS+ ++ HA CPV I+ D
Sbjct: 111 AVL--MVVGCLGSGRWPGRLLGSVSSGLLRHAHCPVVIIHD 149
>sp|O07552|NHAX_BACSU Stress response protein NhaX OS=Bacillus subtilis (strain 168)
GN=nhaX PE=2 SV=2
Length = 166
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 13/163 (7%)
Query: 6 KIGVALDFSPSSKFALSWAVNNLLDKGDTLYIIHI-----NPNSLDESR---NLMWAKSG 57
+I VA D S +SK AL A++ + + H N +D R + G
Sbjct: 6 RIIVAFDGSENSKKALLTAIDLAKTVNAAITVAHSHDMKDNQTVIDPPRPAAEASYISGG 65
Query: 58 SPLIP---LTEFREPETMEKYNVKTDIDALDLLDTASRQKEANIVAKIYWGDARERLLEA 114
+P +++ PE M + ++ A + +Q + +I I GD E ++E
Sbjct: 66 MTSVPDPLISDVTSPEPMIYEDRTEEVIAEARMMLNEQQADGDI--DILEGDPAESIIEH 123
Query: 115 IEDLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
+ D +V GSR ++++I GSVS + + PV IVK
Sbjct: 124 ANRISADMIVTGSRDQNRLKKLIFGSVSEKLSAKSDIPVLIVK 166
>sp|Q57997|Y577_METJA Universal stress protein MJ0577 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0577 PE=1 SV=1
Length = 162
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 102 IYWGDARERLLEAIEDLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
I G E +++ ED +D ++MGS G ++ I+LGSV+ V+ + PV +VK
Sbjct: 103 IVVGIPHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKSNKPVLVVK 158
>sp|O74782|YGBA_SCHPO Universal stress protein A family protein C25B2.10
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC25B2.10 PE=1 SV=1
Length = 307
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 94 KEANIVAKIYWGDARERLLEAIEDLKLDSLVMGSRG--LGTVRRII-LGSVSNYVMTHAP 150
K +I+ ++ G ++ +L I DSL++G+RG L + + ++ GSVS + + +P
Sbjct: 211 KAVSIIVELVVGKPQDMILRTIHVYSPDSLIVGTRGKALNSFQSLLSSGSVSKFCLQKSP 270
Query: 151 CPVTIVK 157
PV +V+
Sbjct: 271 IPVIVVR 277
>sp|O27222|Y1154_METTH Universal stress protein MTH_1154 OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1154 PE=3 SV=1
Length = 146
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 100 AKIYWGDARERLLEAIEDLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
A + GD + +++ E+ +D +VMG+ G V + +LGSVS V+ +APC + +V+
Sbjct: 88 AVMREGDPADEIVKVAEEEDVDVIVMGT-GKSLVDKHLLGSVSEKVVHYAPCTIHLVR 144
>sp|P72817|Y1654_SYNY3 Universal stress protein Sll1654 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1654 PE=3 SV=1
Length = 157
Score = 36.6 bits (83), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 105 GDARERLLEAIEDLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIV 156
G A + + +++ D +VMG RGLG + SV+ V+ +PCPV +V
Sbjct: 105 GMASFTICDVADEVNADLIVMGCRGLGLTTEGVAESVTARVINLSPCPVLVV 156
>sp|A0QZZ6|Y4207_MYCS2 Universal stress protein MSMEG_4207 OS=Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155) GN=MSMEG_4207 PE=1 SV=1
Length = 130
Score = 36.6 bits (83), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 106 DARERLLEAIEDLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVKDPSF 161
DA E LL A++ + LV+G R V +++LGSV+ ++ P PV VK F
Sbjct: 75 DATEELLTAMDSPDAELLVIGIRHRNPVGKLLLGSVAQRLLLECPKPVLAVKPHGF 130
>sp|Q38UQ2|RPOB_LACSS DNA-directed RNA polymerase subunit beta OS=Lactobacillus sakei
subsp. sakei (strain 23K) GN=rpoB PE=3 SV=1
Length = 1197
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Query: 21 LSWAVNNLLDKGDTLYIIHINPNSLDESRNLMWAKSGSPLIPLTEFREPETMEKY---NV 77
+SW +++ DK D L + DE N + A++ SPL F + + +Y N+
Sbjct: 555 VSWDTHDVTDKIDYL--------TADEEDNYVIAQANSPLNDDGSFVDNTVLARYKDDNI 606
Query: 78 KTDIDALDLLDTASRQ 93
+T ID LD +D + +Q
Sbjct: 607 ETSIDKLDYMDVSPKQ 622
>sp|A0QZA1|Y3950_MYCS2 Universal stress protein MSMEG_3950/MSMEI_3859 OS=Mycobacterium
smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_3950
PE=1 SV=1
Length = 294
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 123 LVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVKDPSFGKH 164
+V+G+RG+G + R++LGS S ++ +A PV +V H
Sbjct: 114 VVVGNRGMGALGRVLLGSTSTSLLHYASGPVVVVHGDDQAAH 155
Score = 34.7 bits (78), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 23/151 (15%)
Query: 9 VALDFSPSSKFALSWAVNNLLDKGDTLYIIHINPNSLDESRNLMWAKSGS--PLIPLTEF 66
+ +D SP+S+ A S A + +G L +H+ W G P+ P E
Sbjct: 163 LGIDGSPASEVATSHAFDEASRRGVDLVALHV------------WIDVGDIPPIGPTWEE 210
Query: 67 REPETMEKYNVKTDIDALDLLDTASRQKEANIVAKIYWGDARERLLEAIEDLKLDSLVMG 126
+E ET + + + YW LLE + +L +V+G
Sbjct: 211 QE-ETGRALLAERLAGWQERYPDVKVHRRVERAQPAYW------LLEEAKQAQL--VVVG 261
Query: 127 SRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
S G G ++LGSVS+ V A PV +V+
Sbjct: 262 SHGRGGFTGMLLGSVSSRVAQSATTPVMVVR 292
>sp|Q83M07|USPG_SHIFL Universal stress protein G OS=Shigella flexneri GN=uspG PE=3 SV=1
Length = 142
Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 96 ANIVAKIYWGDARERLLEAIEDLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTI 155
+ I + +G R+ + E E+L D +V+GSR ++ +LGS ++ V+ HA PV +
Sbjct: 82 SRIKQHVRFGSVRDEVNELAEELGADVVVIGSRN-PSISTHLLGSNASSVIRHANLPVLV 140
Query: 156 VK 157
V+
Sbjct: 141 VR 142
>sp|P39177|USPG_ECOLI Universal stress protein G OS=Escherichia coli (strain K12) GN=uspG
PE=1 SV=2
Length = 142
Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 96 ANIVAKIYWGDARERLLEAIEDLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTI 155
+ I + +G R+ + E E+L D +V+GSR ++ +LGS ++ V+ HA PV +
Sbjct: 82 SRIKQHVRFGSVRDEVNELAEELGADVVVIGSRN-PSISTHLLGSNASSVIRHANLPVLV 140
Query: 156 VK 157
V+
Sbjct: 141 VR 142
>sp|Q8XBT3|USPG_ECO57 Universal stress protein G OS=Escherichia coli O157:H7 GN=uspG PE=3
SV=1
Length = 142
Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 96 ANIVAKIYWGDARERLLEAIEDLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTI 155
+ I + +G R+ + E E+L D +V+GSR ++ +LGS ++ V+ HA PV +
Sbjct: 82 SRIKQHVRFGSVRDEVNELAEELGADVVVIGSRN-PSISTHLLGSNASSVIRHANLPVLV 140
Query: 156 VK 157
V+
Sbjct: 141 VR 142
>sp|P64996|Y2346_MYCBO Universal stress protein Mb2346c OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=Mb2346c PE=3 SV=1
Length = 292
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 30/45 (66%)
Query: 111 LLEAIEDLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTI 155
LL+ +E+L+ + LV+GS G R+++GS ++ ++ +P PV I
Sbjct: 95 LLDVVEELEAEVLVLGSFPSGRRARVLIGSTADRLLHSSPVPVAI 139
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 34/60 (56%)
Query: 97 NIVAKIYWGDARERLLEAIEDLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIV 156
++V ++ G+ + L+A + + L +G+ G V R+ LGS S ++ ++P PV ++
Sbjct: 231 DVVLQVVTGNGWAQALDAADWQDGEILALGTSPFGDVARVFLGSWSGKIIRYSPVPVLVL 290
>sp|P64995|Y2319_MYCTU Universal stress protein Rv2319c/MT2382 OS=Mycobacterium
tuberculosis GN=Rv2319c PE=3 SV=1
Length = 292
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 30/45 (66%)
Query: 111 LLEAIEDLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTI 155
LL+ +E+L+ + LV+GS G R+++GS ++ ++ +P PV I
Sbjct: 95 LLDVVEELEAEVLVLGSFPSGRRARVLIGSTADRLLHSSPVPVAI 139
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 34/60 (56%)
Query: 97 NIVAKIYWGDARERLLEAIEDLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIV 156
++V ++ G+ + L+A + + L +G+ G V R+ LGS S ++ ++P PV ++
Sbjct: 231 DVVLQVVTGNGWAQALDAADWQDGEILALGTSPFGDVARVFLGSWSGKIIRYSPVPVLVL 290
>sp|P45680|USPA2_COXBU Universal stress protein A homolog 2 OS=Coxiella burnetii (strain
RSA 493 / Nine Mile phase I) GN=uspA2 PE=1 SV=1
Length = 146
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 75 YNVKTDIDALDLLDTASRQKEANIVAK---------IYWGDARERLLEAIEDLKLDSLVM 125
Y V +D D+L ++++ I ++ + G A+ +LE ++ +D +++
Sbjct: 52 YGVAAGVDVEDMLLEEAKKRMNEIASQLNISSDHQIVKVGPAKFLILEQAKNWGVDLIIV 111
Query: 126 GSRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
GS G ++ ++LGS SN V+ A C V V+
Sbjct: 112 GSHGRHGIQ-LLLGSTSNAVLHGAKCDVLAVR 142
>sp|P73475|Y1230_SYNY3 Universal stress protein Slr1230 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr1230 PE=3 SV=1
Length = 287
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 105 GDARERLLEAIEDLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPV 153
G A E ++ ED +D L+MG+ G +R +++GS + V+ PV
Sbjct: 235 GHAEEAIVRYQEDNAIDLLLMGAHGHSRIRHLVIGSTTAQVLRKTSIPV 283
>sp|P64922|Y2028_MYCBO Universal stress protein Mb2028c OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=Mb2028c PE=3 SV=1
Length = 295
Score = 34.7 bits (78), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 123 LVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIV 156
+V+GS G G + R +LGSVS+ ++ A CPV ++
Sbjct: 114 VVLGSSGRGALARGLLGSVSSSLVRRAGCPVAVI 147
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 123 LVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVKD 158
+V+GS G G + ++LGSVSN V+ A PV + +
Sbjct: 259 VVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQ 294
>sp|P64921|Y2005_MYCTU Universal stress protein Rv2005c/MT2061 OS=Mycobacterium
tuberculosis GN=Rv2005c PE=1 SV=1
Length = 295
Score = 34.7 bits (78), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 123 LVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIV 156
+V+GS G G + R +LGSVS+ ++ A CPV ++
Sbjct: 114 VVLGSSGRGALARGLLGSVSSSLVRRAGCPVAVI 147
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 123 LVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVKD 158
+V+GS G G + ++LGSVSN V+ A PV + +
Sbjct: 259 VVVGSHGRGGLTGMLLGSVSNAVLHAARVPVIVARQ 294
>sp|Q50777|Y1538_METTM Universal stress protein MTBMA_c15380 OS=Methanothermobacter
marburgensis (strain DSM 2133 / 14651 / NBRC 100331 /
OCM 82 / Marburg) GN=MTBMA_c15380 PE=3 SV=1
Length = 143
Score = 33.9 bits (76), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 105 GDARERLLEAIEDLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
G+ + +++ E+ +D ++MG+ G V + +LGSVS V+ +APC + +V+
Sbjct: 90 GNPADEIVKLAEEEDVDVIIMGT-GKSLVDKHLLGSVSEKVVHYAPCTIHLVR 141
>sp|Q8FK07|USPG_ECOL6 Universal stress protein G OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=uspG PE=3 SV=2
Length = 142
Score = 33.9 bits (76), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 96 ANIVAKIYWGDARERLLEAIEDLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTI 155
+ I + +G R+ + E ++L D +V+GSR ++ +LGS ++ V+ HA PV +
Sbjct: 82 SRIKQHVRFGSVRDEVNELAKELDADVVVIGSRN-PSISTHLLGSNASSVIRHANLPVLV 140
Query: 156 VK 157
V+
Sbjct: 141 VR 142
>sp|P67093|USPG_SALTY Universal stress protein G OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=uspG PE=3 SV=1
Length = 142
Score = 33.9 bits (76), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 96 ANIVAKIYWGDARERLLEAIEDLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTI 155
+ I + +G R+ + E E+L D +V+GSR ++ +LGS ++ V+ HA PV +
Sbjct: 82 SRIKTHVRFGSVRDVVNEMGEELDADVVVIGSRN-PSITTHLLGSNASSVVRHATLPVLV 140
Query: 156 VK 157
V+
Sbjct: 141 VR 142
>sp|P67094|USPG_SALTI Universal stress protein G OS=Salmonella typhi GN=uspG PE=3 SV=1
Length = 142
Score = 33.9 bits (76), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 96 ANIVAKIYWGDARERLLEAIEDLKLDSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTI 155
+ I + +G R+ + E E+L D +V+GSR ++ +LGS ++ V+ HA PV +
Sbjct: 82 SRIKTHVRFGSVRDVVNEMGEELDADVVVIGSRN-PSITTHLLGSNASSVVRHATLPVLV 140
Query: 156 VK 157
V+
Sbjct: 141 VR 142
>sp|P32351|IMPX_YEAST Sugar utilization regulatory protein IMP2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IMP2' PE=1
SV=2
Length = 346
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 2 AGDRKIGVALDFSPSSKFALSWAVNNLLDKGDTLYIIHINPN 43
R + D S S +AL++ + +++GDT+YI+H P+
Sbjct: 207 GNQRSFILYTDLSSESTYALTYLMGAAVNQGDTVYIVHWEPS 248
>sp|Q8LH82|HXK1_ORYSJ Hexokinase-1 OS=Oryza sativa subsp. japonica GN=HXK1 PE=2 SV=1
Length = 498
Score = 32.7 bits (73), Expect = 0.95, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 18/104 (17%)
Query: 33 DTLYIIHINPNSLDESRNLM----WAKSGSPLIPLTEFREPETMEKYNVKTDIDALDLLD 88
D I ++P+ L S ++ W SP +PLTEF E E N
Sbjct: 267 DATAIAKLHPSQLPASNTMVINTEWGSFASPCLPLTEFDEALDQESLN------------ 314
Query: 89 TASRQKEANIVAKIYWGDARERLLEAIEDLKLDSLVMGSRGLGT 132
Q +++ +Y G+ R+L I + SL+ G+ L T
Sbjct: 315 -PGEQTYEKLISGMYLGEIVRRVLLKISS-RCPSLLGGAGELAT 356
>sp|Q8S8S7|PUB34_ARATH U-box domain-containing protein 34 OS=Arabidopsis thaliana
GN=PUB34 PE=3 SV=1
Length = 801
Score = 32.7 bits (73), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 17 SKFALSWAVNNLLDKGDTLYIIHINPN 43
S+ A+ WAV+NLL K D +IH+ P
Sbjct: 41 SRRAVRWAVDNLLPKADKFVMIHVIPT 67
>sp|O06188|Y2624_MYCTU Universal stress protein Rv2624c/MT2699 OS=Mycobacterium
tuberculosis GN=Rv2624c PE=1 SV=1
Length = 272
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 30/157 (19%)
Query: 5 RKIGVALDFSPSSKFALSWAVNNLLDKGDTLYIIHI----NPNSLDESRNLMWAKSGSPL 60
+ I V +D S ++ A W V+ + + L ++ + +P+ D R+L A+
Sbjct: 10 KTIIVGIDGSHAAITAALWGVDEAISRAVPLRLVSVIKPTHPSPDDYDRDLAHAER---- 65
Query: 61 IPLTEFREPETMEKYNVKTDIDALDLLDTASRQKEANIVAKIYWGDARERLLEAIEDLKL 120
RE ++ ++A L I I G A L+EA D ++
Sbjct: 66 ----SLRE--------AQSAVEAAGKL--------VKIETDIPRGPAGPVLVEASRDAEM 105
Query: 121 DSLVMGSRGLGTVRRIILGSVSNYVMTHAPCPVTIVK 157
+ +GS G+G ILGS + + A CPV +++
Sbjct: 106 --ICVGSVGIGRYASSILGSTATELAEKAHCPVAVMR 140
>sp|Q83AC1|USPA1_COXBU Universal stress protein A homolog 1 OS=Coxiella burnetii (strain
RSA 493 / Nine Mile phase I) GN=uspA1 PE=3 SV=1
Length = 144
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 15/152 (9%)
Query: 5 RKIGVALDFSPSSKFALSWAVNNLLDKGDTLYIIHINPNSLDESRNLMWAKSGSPLIPLT 64
+ I A+D SP S+ + A TL ++H+ +S A G IP+
Sbjct: 4 KHILAAIDLSPRSQEVIDRAAEVAASNNATLDVVHVIEHS-------PVAYGGEFSIPIN 56
Query: 65 EFREPETMEKYNVKTDIDALDLLDTASRQKEANIVAKIYWGDARERLLEAIEDLKLDSLV 124
E +T+E K + + S ++ G + ++E E L +D +V
Sbjct: 57 VNLE-QTIESEARKALTELCHTVKVPSERQHT------LSGVVKHMVIELAEKLNIDLIV 109
Query: 125 MGSRGLGTVRRIILGSVSNYVMTHAPCPVTIV 156
+G+ G + + +LGS +N ++ A C V V
Sbjct: 110 VGTHGHHGLDK-LLGSRANAILHVATCDVLAV 140
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,802,021
Number of Sequences: 539616
Number of extensions: 2541803
Number of successful extensions: 7065
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 7005
Number of HSP's gapped (non-prelim): 78
length of query: 164
length of database: 191,569,459
effective HSP length: 108
effective length of query: 56
effective length of database: 133,290,931
effective search space: 7464292136
effective search space used: 7464292136
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)