Query 031196
Match_columns 164
No_of_seqs 161 out of 444
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 16:53:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031196.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031196hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i4t_A Diphthine synthase; nia 100.0 2.2E-36 7.4E-41 257.9 11.9 159 4-162 84-243 (292)
2 2z6r_A Diphthine synthase; met 100.0 1.8E-27 6.1E-32 196.7 15.3 146 3-163 64-211 (265)
3 1wde_A Probable diphthine synt 99.9 2E-27 7E-32 200.3 13.7 145 3-163 71-222 (294)
4 1vhv_A Diphthine synthase; str 99.9 1.5E-23 5.3E-28 174.1 14.9 134 3-163 75-209 (268)
5 2e0n_A Precorrin-2 C20-methylt 99.7 2.2E-17 7.4E-22 135.8 12.7 98 3-107 83-182 (259)
6 2qbu_A Precorrin-2 methyltrans 99.7 3.3E-17 1.1E-21 131.6 12.3 95 4-107 82-178 (232)
7 2ybo_A Methyltransferase; SUMT 99.7 3.5E-17 1.2E-21 138.1 11.0 104 4-107 90-195 (294)
8 1ve2_A Uroporphyrin-III C-meth 99.7 3.9E-17 1.3E-21 132.3 8.4 94 4-106 66-161 (235)
9 1s4d_A Uroporphyrin-III C-meth 99.7 1.6E-16 5.4E-21 133.0 11.0 100 4-107 80-186 (280)
10 1cbf_A Cobalt-precorrin-4 tran 99.7 3.7E-16 1.3E-20 130.7 12.4 102 3-106 80-185 (285)
11 1va0_A Uroporphyrin-III C-meth 99.7 2.1E-16 7.1E-21 128.3 8.8 95 4-107 63-161 (239)
12 1wyz_A Putative S-adenosylmeth 99.6 3.7E-15 1.3E-19 122.1 11.2 96 3-106 70-174 (242)
13 1pjq_A CYSG, siroheme synthase 99.6 1.5E-15 5.2E-20 134.8 8.7 101 4-106 281-383 (457)
14 4e16_A Precorrin-4 C(11)-methy 99.6 1.1E-14 3.8E-19 120.0 12.1 102 3-106 64-169 (253)
15 3ndc_A Precorrin-4 C(11)-methy 99.5 3.7E-14 1.3E-18 118.0 12.0 72 3-74 63-136 (264)
16 2npn_A Putative cobalamin synt 99.5 4.3E-15 1.5E-19 121.7 5.7 88 8-105 94-186 (251)
17 2zvb_A Precorrin-3 C17-methylt 99.5 8.4E-14 2.9E-18 118.2 10.5 113 6-140 64-201 (295)
18 3nut_A Precorrin-3 methylase; 99.4 1E-12 3.5E-17 107.9 11.2 93 7-105 69-170 (251)
19 3kwp_A Predicted methyltransfe 99.4 8.3E-13 2.8E-17 112.3 10.2 96 4-107 76-176 (296)
20 2bb3_A Cobalamin biosynthesis 99.3 1.4E-12 4.6E-17 105.7 6.7 95 3-108 76-171 (221)
21 3nd1_A Precorrin-6A synthase/C 99.3 1.5E-12 5.2E-17 109.8 6.7 67 8-74 115-185 (275)
22 3hh1_A Tetrapyrrole methylase 98.9 1.1E-09 3.6E-14 80.8 5.5 49 4-52 67-117 (117)
23 3ffy_A Putative tetrapyrrole ( 90.4 0.24 8.3E-06 35.9 3.7 49 50-106 1-51 (115)
24 2z1d_A Hydrogenase expression/ 69.4 9.3 0.00032 33.7 6.2 106 5-141 75-190 (372)
25 2z2u_A UPF0026 protein MJ0257; 61.6 20 0.00068 28.7 6.5 74 17-96 130-211 (311)
26 3nav_A Tryptophan synthase alp 59.1 6.4 0.00022 32.6 3.1 31 17-48 22-52 (271)
27 3c8f_A Pyruvate formate-lyase 52.5 24 0.00084 26.4 5.3 38 17-54 71-109 (245)
28 2hqb_A Transcriptional activat 49.3 18 0.0006 28.8 4.2 38 14-51 4-45 (296)
29 2qip_A Protein of unknown func 46.9 31 0.0011 25.6 5.0 37 9-49 102-139 (165)
30 3can_A Pyruvate-formate lyase- 46.7 22 0.00076 26.1 4.1 36 18-53 6-42 (182)
31 2yva_A DNAA initiator-associat 43.7 43 0.0015 24.7 5.4 102 3-107 28-146 (196)
32 4ei7_A Plasmid replication pro 43.1 46 0.0016 28.8 6.1 82 3-107 95-186 (389)
33 2fqx_A Membrane lipoprotein TM 41.1 24 0.00083 28.4 3.8 37 14-50 3-44 (318)
34 3tha_A Tryptophan synthase alp 38.6 15 0.00051 30.3 2.2 32 16-48 15-46 (252)
35 2j01_J 50S ribosomal protein L 38.0 1.3E+02 0.0044 22.7 7.4 95 7-104 11-108 (173)
36 2l82_A Designed protein OR32; 33.7 62 0.0021 24.4 4.7 47 4-52 66-112 (162)
37 2fi9_A Outer membrane protein; 33.5 97 0.0033 22.5 5.8 64 4-71 57-120 (128)
38 2yx0_A Radical SAM enzyme; pre 32.7 74 0.0025 25.8 5.6 38 17-54 144-181 (342)
39 3vnd_A TSA, tryptophan synthas 32.6 30 0.001 28.4 3.1 29 17-46 20-48 (267)
40 4fzr_A SSFS6; structural genom 28.2 57 0.002 26.3 4.1 54 16-69 16-69 (398)
41 1g5t_A COB(I)alamin adenosyltr 28.0 2.2E+02 0.0074 22.3 8.0 81 18-106 30-128 (196)
42 3ia7_A CALG4; glycosysltransfe 27.1 67 0.0023 25.5 4.3 54 17-70 6-59 (402)
43 3rsc_A CALG2; TDP, enediyne, s 26.7 96 0.0033 25.0 5.2 59 11-69 16-74 (415)
44 3qk7_A Transcriptional regulat 25.8 49 0.0017 25.5 3.1 34 16-49 7-46 (294)
45 1zav_A 50S ribosomal protein L 25.6 2.2E+02 0.0075 21.6 7.5 88 6-96 12-106 (180)
46 3m9w_A D-xylose-binding peripl 24.6 85 0.0029 24.3 4.3 25 25-49 14-38 (313)
47 2ab1_A Hypothetical protein; H 23.9 1.6E+02 0.0053 21.3 5.4 35 16-50 62-96 (122)
48 3k4h_A Putative transcriptiona 23.4 62 0.0021 24.6 3.2 38 15-52 8-52 (292)
49 2a5h_A L-lysine 2,3-aminomutas 23.3 1.1E+02 0.0038 26.1 5.2 27 18-44 165-194 (416)
50 1tv8_A MOAA, molybdenum cofact 23.3 1.3E+02 0.0045 24.2 5.4 50 7-56 56-109 (340)
51 3nkl_A UDP-D-quinovosamine 4-d 23.1 48 0.0017 23.0 2.4 21 33-53 82-102 (141)
52 3otg_A CALG1; calicheamicin, T 23.0 1.1E+02 0.0037 24.5 4.8 53 16-69 21-74 (412)
53 3qph_A TRMB, A global transcri 22.9 74 0.0025 26.7 3.9 42 5-49 123-164 (342)
54 2fvt_A Conserved hypothetical 22.8 1.6E+02 0.0056 21.6 5.4 66 5-74 57-122 (135)
55 4ggj_A Mitochondrial cardiolip 22.8 39 0.0013 25.8 2.0 55 11-69 56-118 (196)
56 3oti_A CALG3; calicheamicin, T 22.4 97 0.0033 25.0 4.4 53 16-69 21-73 (398)
57 3l49_A ABC sugar (ribose) tran 22.3 66 0.0023 24.4 3.2 39 33-71 51-95 (291)
58 3uug_A Multiple sugar-binding 22.3 81 0.0028 24.4 3.8 12 60-71 82-93 (330)
59 4efa_G V-type proton ATPase su 21.8 40 0.0014 24.8 1.7 18 127-144 4-21 (119)
60 2ekc_A AQ_1548, tryptophan syn 21.7 87 0.003 25.0 3.9 32 17-49 19-50 (262)
61 4gel_A Mitochondrial cardiolip 21.5 25 0.00086 26.7 0.6 36 11-50 68-104 (220)
62 3av0_A DNA double-strand break 21.5 1E+02 0.0036 25.6 4.5 47 6-52 49-104 (386)
63 1gsa_A Glutathione synthetase; 21.5 88 0.003 24.1 3.9 33 17-50 3-39 (316)
64 4g4s_O Proteasome chaperone 1; 21.0 1.6E+02 0.0053 24.9 5.4 81 59-141 118-204 (276)
65 3k2t_A LMO2511 protein; lister 20.9 59 0.002 20.9 2.2 15 127-141 11-25 (57)
66 3s99_A Basic membrane lipoprot 20.8 43 0.0015 28.2 2.0 39 15-53 26-70 (356)
67 3hs3_A Ribose operon repressor 20.7 79 0.0027 24.1 3.4 38 15-52 10-50 (277)
68 1viz_A PCRB protein homolog; s 20.7 75 0.0026 25.7 3.3 36 16-53 7-42 (240)
69 3tsa_A SPNG, NDP-rhamnosyltran 20.4 89 0.003 24.9 3.7 50 17-71 3-58 (391)
70 3l7o_A Ribose-5-phosphate isom 20.3 2E+02 0.0068 23.1 5.8 89 14-109 17-123 (225)
No 1
>3i4t_A Diphthine synthase; niaid, ssgcid, infectious disease, anaerobic parasitic protozoan, structural genomics, decode, UW, SBRI; 2.49A {Entamoeba histolytica}
Probab=100.00 E-value=2.2e-36 Score=257.86 Aligned_cols=159 Identities=55% Similarity=0.884 Sum_probs=133.2
Q ss_pred chHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecCceEEEecCCCCccc
Q 031196 4 EKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETWRP 83 (164)
Q Consensus 4 ~~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg~~vtIpf~~~~~~P 83 (164)
+.++.|++.+++++||+|+.|||++|+++.+++.++++.|+++++|||+|+++|++++|+|+++||.+.+++|++.+|+|
T Consensus 84 ~~~~~i~~~a~~~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~veviPGiSs~~A~a~~G~pl~~~~~~~sv~~~t~~~~p 163 (292)
T 3i4t_A 84 TEADQILEPAKTKNVALLVVGDVYGATTHSDIFVRCQKMGIEVKVIHNASIMNAIGCSGLQLYRFGQTVSVCFWSEHWRP 163 (292)
T ss_dssp -CCCTTHHHHTTSEEEEEESBCHHHHCTTHHHHHHHHHHTCCEEEECCCCHHHHGGGGSCCGGGBCCCEEECCCBTTBCC
T ss_pred HHHHHHHHHhcCCCEEEEecCCCCccccHHHHHHHHHHCCCcEEEECCHHHHHHHHHhCCCcccCCceeEEEEEeCCCCC
Confidence 34455777887899999999999999999999999999999999999999999889999999999999999999999999
Q ss_pred CchHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcce-eeeeccc
Q 031196 84 GSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELK-IILKQLQ 162 (164)
Q Consensus 84 ~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~~~~~~~~~~~~-~v~~~~~ 162 (164)
.++++.+.+|+..+.|||||+|++++|++++|||||+++|+|||||++++++++|++++++...+.+++++. +|+.+++
T Consensus 164 ~~~~~~~~~~l~~~~~Tlvl~d~~~~e~~~~~~~~~~~~y~p~r~m~~~~~~~~L~~~~~~l~~~g~~~dtpv~vv~~~t 243 (292)
T 3i4t_A 164 SSYYPKIKINRDNNMHTLVLLDIKVKERSEESIIKGRDIFEPPRYMTINQCIEQLLEVEKEQHLGVYDEDTMVVGMARVA 243 (292)
T ss_dssp CTHHHHHHHHHHTTCBEEEEECEECCC-------------CCCEECCHHHHHHHHHHHHHHHCCCSCCTTCEEEEEESTT
T ss_pred CccHHHHHHHhhcCCCeEEEEeccccccchhhccccccccCCccccCHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeecC
Confidence 999999999999999999999999999999999999999999999999999999999998877777887665 5555554
No 2
>2z6r_A Diphthine synthase; methyltransferase, S-adenosyl-L-methionine, transferase; HET: SAH MES; 1.50A {Pyrococcus horikoshii} PDB: 2dek_A* 1wng_A* 1vce_A* 2ed3_A* 2e4r_A* 2owg_A* 2ek3_A* 2pcm_A* 2p5c_A* 2hut_A* 2emr_A* 2el3_A* 2el0_A* 2ejk_A* 2eld_A* 2el2_A* 2eka_A* 2eh5_A* 2pcg_A* 2el1_A* ...
Probab=99.95 E-value=1.8e-27 Score=196.66 Aligned_cols=146 Identities=38% Similarity=0.667 Sum_probs=130.0
Q ss_pred hchHHHHH-hhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecCceEEEecCCCCc
Q 031196 3 EEKADKIL-SESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETW 81 (164)
Q Consensus 3 E~~~~~I~-~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg~~vtIpf~~~~~ 81 (164)
|+..+.|+ +.+++++||+|+.|||++|+++.+++.++++.|+++++|||+||++|+|++|++++.||++++++|++.+|
T Consensus 64 ~~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~veviPGiSs~~aaa~~g~pl~~~~~~~~v~~~s~~~ 143 (265)
T 2z6r_A 64 ELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKFGKSATVAYPEGNW 143 (265)
T ss_dssp HHHHHHHTHHHHTTSCEEEEESBCTTSSSSTHHHHHHHHHTTCCEEEECCCCHHHHGGGGTCCGGGBCCCEEECCCBTTB
T ss_pred HHHHHHHHHHHhCCCcEEEEECCCCcCCCCHHHHHHHHHHCCCcEEEECChhHHHHHHHhCCCccCCCccEEEEEecCCc
Confidence 34456677 77778999999999999999999999999999999999999999987799999999999999999999999
Q ss_pred ccCchHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcc-eeeeec
Q 031196 82 RPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHEL-KIILKQ 160 (164)
Q Consensus 82 ~P~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~~~~~~~~~~~-~~v~~~ 160 (164)
+|.++++.+..+++.+.||+||||+++++ ||||+..++.++|.++.++.+.+.+++++ .+|+.+
T Consensus 144 ~~~~~~~~l~~~~~~~~~tlvl~d~~~~~---------------~~y~~~~~~~~~l~~~~~~l~~~~~~~~~~v~v~~~ 208 (265)
T 2z6r_A 144 FPTSYYDVIKENAERGLHTLLFLDIKAEK---------------RMYMTANEAMELLLKVEDMKKGGVFTDDTLVVVLAR 208 (265)
T ss_dssp CCCHHHHHHHHHHHTTCBEEEEECEEGGG---------------TEECCHHHHHHHHHHHHHHHCCSSSCTTCEEEEEES
T ss_pred CCCchHHHHHHHHhCCCceEEEEeccccc---------------ccccCHHHHHHHHHHHHHHHhhcCCCCCCEEEEEEe
Confidence 99988999999999999999999999876 89999999999999988887766676554 566667
Q ss_pred ccc
Q 031196 161 LQT 163 (164)
Q Consensus 161 ~~~ 163 (164)
++.
T Consensus 209 l~~ 211 (265)
T 2z6r_A 209 AGS 211 (265)
T ss_dssp TTS
T ss_pred CCC
Confidence 664
No 3
>1wde_A Probable diphthine synthase; structural genomics, conserved hypothetical protein, riken S genomics/proteomics initiative, RSGI, transferase; 2.00A {Aeropyrum pernix} SCOP: c.90.1.1
Probab=99.95 E-value=2e-27 Score=200.32 Aligned_cols=145 Identities=30% Similarity=0.381 Sum_probs=127.3
Q ss_pred hchHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCc
Q 031196 3 EEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW 81 (164)
Q Consensus 3 E~~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~ 81 (164)
|+..+.|++.+++++||+|+.|||++|+||.+++.++++.|+++++|||+||++|+ |++|+|+++||++++|+|++++|
T Consensus 71 e~~~~~i~~~~~g~~Vv~L~~GDP~v~g~~~~l~~~l~~~gi~veviPGiSs~~aa~a~~Gipl~~~~~~~~v~~~~~~~ 150 (294)
T 1wde_A 71 EERSREIVSRALDAVVAVVTAGDPMVATTHSSLAAEALEAGVAVRYIPGVSGVQAARGATMLSFYRFGGTVTLPGPWRGV 150 (294)
T ss_dssp HTSHHHHTCCSSCCEEEEEESBCTTSSSSHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHTCCGGGEEEEEEECCGGGCC
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCCccccCHHHHHHHHHHCCCCEEEECCHhHHHHHHHHhCCCccCCCceEEEEeccCcc
Confidence 45567788888888999999999999999999999999999999999999999998 99999999999999999999999
Q ss_pred ccCchHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHH----hCC-CCCCCcc-e
Q 031196 82 RPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELL----QGE-SGKAHEL-K 155 (164)
Q Consensus 82 ~P~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~----~~~-~~~~~~~-~ 155 (164)
.|.++++.+..|+..+.||+||++...+ +|||++++++++|+++++. +++ |.+++++ .
T Consensus 151 ~p~~~~~~l~~~l~~~~~tlvl~~~~~~----------------~~~m~~~~i~~~L~~l~~~l~~~~~~~G~~~~~~~v 214 (294)
T 1wde_A 151 TPISVARRIYLNLCAGLHTTALLDVDER----------------GVQLSPGQGVSLLLEADREYAREAGAPALLARLPSV 214 (294)
T ss_dssp CCHHHHHHHHHHHHHTCEEEEEECBCTT----------------SCBCCHHHHHHHHHHHHHHHHHHHTSCCCGGGSCEE
T ss_pred cCCChHHHHHHHHhcCCCeEEEEecccc----------------cccccHHHHHHHHHHHHHhhhccccccCcCCCCCEE
Confidence 9999999999999999999999998743 6999999999999988775 444 5555444 5
Q ss_pred eeeecccc
Q 031196 156 IILKQLQT 163 (164)
Q Consensus 156 ~v~~~~~~ 163 (164)
+|+.+++.
T Consensus 215 ~v~~~lg~ 222 (294)
T 1wde_A 215 LVEAGAGG 222 (294)
T ss_dssp EEECCGGG
T ss_pred EEEEeCCC
Confidence 66667654
No 4
>1vhv_A Diphthine synthase; structural genomics, transferase; HET: MSE; 1.75A {Archaeoglobus fulgidus} SCOP: c.90.1.1
Probab=99.91 E-value=1.5e-23 Score=174.09 Aligned_cols=134 Identities=31% Similarity=0.539 Sum_probs=115.9
Q ss_pred hchHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCc
Q 031196 3 EEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW 81 (164)
Q Consensus 3 E~~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~ 81 (164)
|+.++.|++.+++++||+|+.|||++|+++.+++.++++.|+++++|||+||++|+ |++|+|++.|+..++++| |
T Consensus 75 ~~~~~~i~~~a~~~~Va~L~~GDP~iy~~~~~l~~~~~~~gi~vevIPGiSs~~aa~a~~G~pl~~~~~~~sv~~----~ 150 (268)
T 1vhv_A 75 EENSFRLIERAKSKSVVLLVPGDPMVATTHSAIKLEAERKGVKTRIIHGASISTAVCGLTGLHNYRFGKSATVSW----H 150 (268)
T ss_dssp TTTHHHHHHHHTTSEEEEEESBCTTSSSHHHHHHHHHHHTTCCEEEECCCCHHHHHHHHHCCCGGGBCCCEEECS----S
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCCcccCcHHHHHHHHHHCCCcEEEECCccHHHHHHHHcCCCcccCcceEEEEe----c
Confidence 45567888888889999999999999999999999999999999999999999998 999999999999999988 5
Q ss_pred ccCchHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcceeeeecc
Q 031196 82 RPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKIILKQL 161 (164)
Q Consensus 82 ~P~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~~~~~~~~~~~~~v~~~~ 161 (164)
.|.++++.+.+|+..+.||+|++|.+. .||++..++++|+++.+..+ +...+|+.++
T Consensus 151 ~~~~~~~~~~~~l~~~~~tlvl~d~~~------------------~~~~~~~~~~~L~~l~~~~~-----~~~v~v~~~l 207 (268)
T 1vhv_A 151 RSQTPVNVIKANRSIDAHTLLFLDLHP------------------EPMTIGHAVENLIAEDAQMK-----DLYAVGIARA 207 (268)
T ss_dssp CCSHHHHHHHHHHHTTCBEEEEECCSS------------------SCCCHHHHHHHHHHHCGGGG-----GSEEEEEEST
T ss_pred CCCchHHHHHHHhccCCCeEEEEcCch------------------hhcCHHHHHHHHHHHHhcCC-----CcEEEEEEcC
Confidence 788889999999998889999999963 38999999999998755322 3345666666
Q ss_pred cc
Q 031196 162 QT 163 (164)
Q Consensus 162 ~~ 163 (164)
+.
T Consensus 208 ~~ 209 (268)
T 1vhv_A 208 GS 209 (268)
T ss_dssp TS
T ss_pred CC
Confidence 53
No 5
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A*
Probab=99.74 E-value=2.2e-17 Score=135.79 Aligned_cols=98 Identities=17% Similarity=0.200 Sum_probs=82.3
Q ss_pred hchHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCC
Q 031196 3 EEKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTET 80 (164)
Q Consensus 3 E~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~ 80 (164)
|+..+.|++.++ +++||+|+.|||++|+++.+++.++++.|+++++|||+||++|+ +++|++++.+|+.+++. +..
T Consensus 83 ~~~~~~i~~~~~~g~~Va~l~~GDP~~~~~~~~l~~~l~~~gi~v~viPGiSs~~aa~a~~G~pl~~~~~~~~~~--~~~ 160 (259)
T 2e0n_A 83 AANYASMAEEVQAGRRVAVVSVGDGGFYSTASAIIERARRDGLDCSMTPGIPAFIAAGSAAGMPLALQSDSVLVL--AQI 160 (259)
T ss_dssp GGGHHHHHHHHHTTCEEEEEESBCTTBSCTHHHHHHHHHTTTCCEEEECCCCHHHHHHHHTTCCSBCTTCCEEEE--CSC
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCCcccccHHHHHHHHHHCCCCEEEeCChhHHHHHHHhcCCCCcCCCceEEEE--cCC
Confidence 556678888887 58999999999999999999999999999999999999999998 99999999999988863 211
Q ss_pred cccCchHHHHHHHHhcCCccEEEEecc
Q 031196 81 WRPGSFYEKIKRNRSLGLHTLCLLDIR 107 (164)
Q Consensus 81 ~~P~s~y~~I~~N~~~glHTlvLLDi~ 107 (164)
. ..+.++..++.+ +|+||++..
T Consensus 161 ~----~~~~l~~~~~~~-~t~vl~~~~ 182 (259)
T 2e0n_A 161 D----EIGELERALVTH-STVVVMKLS 182 (259)
T ss_dssp S----STHHHHHHHTTC-SEEEECCTT
T ss_pred C----CHHHHHHHhhcC-CEEEEEccc
Confidence 1 246677777655 899998764
No 6
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.73 E-value=3.3e-17 Score=131.56 Aligned_cols=95 Identities=20% Similarity=0.254 Sum_probs=78.6
Q ss_pred chHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCc
Q 031196 4 EKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW 81 (164)
Q Consensus 4 ~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~ 81 (164)
+..+.|++.++ +++||+|+.|||++|+++.+++.++++.|+++++|||+||++|+ +++|++++++|..+++.
T Consensus 82 ~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~~~~~gi~v~viPGiSs~~aa~a~~g~pl~~~~~~~~~~------ 155 (232)
T 2qbu_A 82 SAARMVAAELEDGRDVAFITLGDPSIYSTFSYLQQRIEDMGFKTEMVPGVTSFTACAATAGRTLVEGDEILLVV------ 155 (232)
T ss_dssp HHHHHHHHHHHTTCCEEEEESBCTTBSCSHHHHHHHHHHTTCCEEEECCCCHHHHHHHHTTCCCBCTTCCEEEE------
T ss_pred HHHHHHHHHHHCCCeEEEEeCCCCccchhHHHHHHHHHHCCCcEEEeCCccHHHHHHHHhCCCCCCCCceEEEE------
Confidence 44556777776 58999999999999999999999999999999999999999998 99999999999888873
Q ss_pred ccCchHHHHHHHHhcCCccEEEEecc
Q 031196 82 RPGSFYEKIKRNRSLGLHTLCLLDIR 107 (164)
Q Consensus 82 ~P~s~y~~I~~N~~~glHTlvLLDi~ 107 (164)
|.+.- .+...++.+ +|+||++..
T Consensus 156 -~~~~~-~l~~~~~~~-~t~vl~~~~ 178 (232)
T 2qbu_A 156 -PRVDD-RFERVLRDV-DACVIMKTS 178 (232)
T ss_dssp -SSCCH-HHHHHGGGC-SEEEESSHH
T ss_pred -eCCHH-HHHHHhhcC-CeEEEEccc
Confidence 22211 566666665 899998654
No 7
>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A*
Probab=99.71 E-value=3.5e-17 Score=138.12 Aligned_cols=104 Identities=17% Similarity=0.155 Sum_probs=80.4
Q ss_pred chHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCc
Q 031196 4 EKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW 81 (164)
Q Consensus 4 ~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~ 81 (164)
+..+.|++.++ +++|++|+.|||++|+++.+++.++++.|+++++|||+||++|+ +++|++++.+|.+-++.|.+...
T Consensus 90 ~i~~~l~~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~vevIPGiSS~~aa~a~~Giplt~~~~~~~~~~~sg~~ 169 (294)
T 2ybo_A 90 EINELLVRLARQQRRVVRLKGGDPFIFGRGAEELERLLEAGVDCQVVPGVTAASGCSTYAGIPLTHRDLAQSCTFVTGHL 169 (294)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEBCTTSSSSHHHHHHHHHHTTCCEEEECCCCHHHHHHHHTTCCSCBTTTBSCEEEEECSC
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCCCccCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHcCCCcccCCCCcEEEEEcccC
Confidence 33455777776 58999999999999999999999999999999999999999998 99999999999755554444444
Q ss_pred ccCchHHHHHHHHhcCCccEEEEecc
Q 031196 82 RPGSFYEKIKRNRSLGLHTLCLLDIR 107 (164)
Q Consensus 82 ~P~s~y~~I~~N~~~glHTlvLLDi~ 107 (164)
.+.+..+...+++..+-+|+||++-.
T Consensus 170 ~~~~~~~~~~~~l~~~~~tlVl~~~~ 195 (294)
T 2ybo_A 170 QNDGRLDLDWAGLARGKQTLVFYMGL 195 (294)
T ss_dssp CTTSSCCCCHHHHTSSSCEEEEESCG
T ss_pred CcccchhhHHHHHhcCCCeEEEECcH
Confidence 44321122234455666999998764
No 8
>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1
Probab=99.69 E-value=3.9e-17 Score=132.34 Aligned_cols=94 Identities=21% Similarity=0.187 Sum_probs=75.3
Q ss_pred chHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCc
Q 031196 4 EKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW 81 (164)
Q Consensus 4 ~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~ 81 (164)
+..+.|++.++ +++||+|+.|||++|+++.+++.++++.|+++++|||+||++|+ +++|++++.+|.+-++.|.+...
T Consensus 66 ~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~v~viPGiSs~~aa~a~~g~pl~~~~~~~~~~~~s~~~ 145 (235)
T 1ve2_A 66 AITARLIALAREGRVVARLKGGDPMVFGRGGEEALALRRAGIPFEVVPGVTSAVGALSALGLPLTHRGLARSFAVATGHD 145 (235)
T ss_dssp HHHHHHHHHHHTTCEEEEEESBCTTSSTTHHHHHHHHHHHTCCEEEECCCCTTHHHHHHTTCCSCBTTTBSCEEEEESSC
T ss_pred HHHHHHHHHHHcCCeEEEEcCCCCCcccCHHHHHHHHHHCCCCEEEECCHhHHHHHHHHcCCCcccCCcccEEEEeCCCC
Confidence 33455777776 58999999999999999999999999999999999999999998 99999999998543333333333
Q ss_pred ccCchHHHHHHHHhcCCccEEEEec
Q 031196 82 RPGSFYEKIKRNRSLGLHTLCLLDI 106 (164)
Q Consensus 82 ~P~s~y~~I~~N~~~glHTlvLLDi 106 (164)
|.+ ++. +-||+|+++-
T Consensus 146 -~~~-------~l~-~~~t~vl~~~ 161 (235)
T 1ve2_A 146 -PAL-------PLP-RADTLVLLMP 161 (235)
T ss_dssp -TTS-------CCC-BCSEEEEEC-
T ss_pred -chh-------hhc-cCCeEEEEcC
Confidence 532 556 5699999874
No 9
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=99.68 E-value=1.6e-16 Score=132.96 Aligned_cols=100 Identities=13% Similarity=0.140 Sum_probs=77.1
Q ss_pred chHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCc
Q 031196 4 EKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW 81 (164)
Q Consensus 4 ~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~ 81 (164)
+..+.|++.++ +++||+|+.|||++|+++.+++..+++.|+++++|||+||++|+ +++|++++..|..-++.|.+.+.
T Consensus 80 ~i~~~l~~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~veviPGiSs~~aa~a~~Gipl~~~~~~~~~~~~~~~~ 159 (280)
T 1s4d_A 80 DISLRLVELARAGNRVLRLKGGDPFVFGRGGEEALTLVEHQVPFRIVPGITAGIGGLAYAGIPVTHREVNHAVTFLTGHD 159 (280)
T ss_dssp HHHHHHHHHHHTTCCEEEEESBCTTSSSSHHHHHHHHHTTTCCEEEECCCCTTTHHHHHTTCCSCCTTTCSEEEEEECCC
T ss_pred HHHHHHHHHHhCCCeEEEEcCCCCccccCHHHHHHHHHHCCCCEEEEcCccHHHHHHHHcCCCccCCCcccEEEEECCcC
Confidence 34455777776 58999999999999999999999999999999999999999998 99999999888743443333333
Q ss_pred ccC-----chHHHHHHHHhcCCccEEEEecc
Q 031196 82 RPG-----SFYEKIKRNRSLGLHTLCLLDIR 107 (164)
Q Consensus 82 ~P~-----s~y~~I~~N~~~glHTlvLLDi~ 107 (164)
.+. ..++.+ ..+-+|+||++..
T Consensus 160 ~~~~~~~~~~~~~l----~~~~~tlVl~~~~ 186 (280)
T 1s4d_A 160 SSGLVPDRINWQGI----ASGSPVIVMYMAM 186 (280)
T ss_dssp -------CCCHHHH----HTTCSEEEEESCS
T ss_pred CcccccccccHHHH----hCCCCeEEEECch
Confidence 332 133433 4456999999875
No 10
>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A*
Probab=99.67 E-value=3.7e-16 Score=130.66 Aligned_cols=102 Identities=19% Similarity=0.174 Sum_probs=79.1
Q ss_pred hchHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecC--C
Q 031196 3 EEKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFF--T 78 (164)
Q Consensus 3 E~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~--~ 78 (164)
|+..+.|++.++ +++||+|+.|||++|+++.+++.++.+.|+++++|||+||++|+ +++|++++.+|.+-++.|. .
T Consensus 80 ~~~~~~i~~~~~~g~~Vv~L~~GDP~i~g~~~~l~~~l~~~gi~veviPGiSS~~aa~a~~G~pl~~~~~~~~~~~~~~~ 159 (285)
T 1cbf_A 80 EEMVGTMLDRMREGKMVVRVHTGDPAMYGAIMEQMVLLKREGVDIEIVPGVTSVFAAAAAAEAELTIPDLTQTVILTRAE 159 (285)
T ss_dssp HHHHHHHHHHHTTTCCEEEEESBCTTTTCCCHHHHHHHHHTTCEEEEECCCCHHHHHHHHTTCCSCBTTTBCCEEEEECC
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCccccccHHHHHHHHHHCCCcEEEECCchHHHHHHHHcCCCcccCCcceeEEEeccC
Confidence 445667888776 58999999999999999999999999999999999999999998 9999999999865444432 2
Q ss_pred CCcccCchHHHHHHHHhcCCccEEEEec
Q 031196 79 ETWRPGSFYEKIKRNRSLGLHTLCLLDI 106 (164)
Q Consensus 79 ~~~~P~s~y~~I~~N~~~glHTlvLLDi 106 (164)
.. .|....+.+ .++..+-+|+|+++-
T Consensus 160 g~-~~~~~~~~l-~~l~~~~~tlvl~~~ 185 (285)
T 1cbf_A 160 GR-TPVPEFEKL-TDLAKHKCTIALFLS 185 (285)
T ss_dssp SS-SCCCGGGCH-HHHHTTCSEEEEESC
T ss_pred CC-CCcchHHHH-HHHhcCCCeEEEECc
Confidence 21 232233334 345556699999864
No 11
>1va0_A Uroporphyrin-III C-methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.97A {Thermus thermophilus} SCOP: c.90.1.1 PDB: 1v9a_A
Probab=99.66 E-value=2.1e-16 Score=128.34 Aligned_cols=95 Identities=22% Similarity=0.127 Sum_probs=74.1
Q ss_pred chHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecCc--eEEE-ecCCC
Q 031196 4 EKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGE--TVSI-PFFTE 79 (164)
Q Consensus 4 ~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg~--~vtI-pf~~~ 79 (164)
+..+.|++.++ +++||+|+.|||++|+++.+++.++++.|+++++|||+||++|+ |++++.+|. .+++ ++..
T Consensus 63 ~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~v~viPGiSs~~aa---g~pl~~~~~~~~~~~~~~~~- 138 (239)
T 1va0_A 63 EIHRLLLRHARAHPFVVRLKGGDPMVFGRGGEEVLFLLRHGVPVEVVPGVTSLLAS---GLPLTHRGLAHGFAAVSGVL- 138 (239)
T ss_dssp HHHHHHHHHHHTSSEEEEEESBCTTSSSSHHHHHHHHHHTTCCEEEECCCCGGGTT---CCCSSBTTTBSEEEEEESSC-
T ss_pred HHHHHHHHHHHCCCcEEEEeCCCCccccCHHHHHHHHHHCCCcEEEECCcchHhhc---CCCcccCCccceEEEEeccC-
Confidence 44456777776 58999999999999999999999999999999999999999988 999999984 5554 3322
Q ss_pred CcccCchHHHHHHHHhcCCccEEEEecc
Q 031196 80 TWRPGSFYEKIKRNRSLGLHTLCLLDIR 107 (164)
Q Consensus 80 ~~~P~s~y~~I~~N~~~glHTlvLLDi~ 107 (164)
++.. ....+++..+ ||+||++-.
T Consensus 139 --~~~~--~~~~~~l~~~-~t~vl~~~~ 161 (239)
T 1va0_A 139 --EGGG--YPDLRPFARV-PTLVVLMGV 161 (239)
T ss_dssp --GGGC--CCCCTTTTTC-SSEEEESCS
T ss_pred --Cccc--hhhHHHhcCC-CcEEEEccH
Confidence 2221 1233556777 999998743
No 12
>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1
Probab=99.61 E-value=3.7e-15 Score=122.12 Aligned_cols=96 Identities=17% Similarity=0.165 Sum_probs=64.9
Q ss_pred hchHHHHHhhcc-cCCeEEEe-cCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCC
Q 031196 3 EEKADKILSESQ-ESNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTE 79 (164)
Q Consensus 3 E~~~~~I~~~a~-~~~VafLt-~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~ 79 (164)
++.++.|++.++ +++||+|+ .|||++|+++.+++.++++.|++|++|||+||++|+ |++|++.+.| ++.
T Consensus 70 ~~~~~~i~~~~~~G~~Va~ls~~GdP~i~~~g~~l~~~l~~~gi~vevIPGiSs~~aa~a~~G~p~~~f----~~~---- 141 (242)
T 1wyz_A 70 PEDISGYLKPLAGGASMGVISEAGCPAVADPGADVVAIAQRQKLKVIPLVGPSSIILSVMASGFNGQSF----AFH---- 141 (242)
T ss_dssp HHHHHHHHHHHHTTCCEEEECC-------CHHHHHHHHHHHTTCCEEECCCCCHHHHHHHHHTSCSSSE----EEE----
T ss_pred HHHHHHHHHHHHcCCEEEEEecCCCCcccCcHHHHHHHHHHCCCCEEEeCcHHHHHHHHHHcCCCCCeE----EEE----
Confidence 345677888887 58999997 899999999999999999999999999999999998 9999995544 331
Q ss_pred CcccCch---HHHHHHHHhc---CCccEEEEec
Q 031196 80 TWRPGSF---YEKIKRNRSL---GLHTLCLLDI 106 (164)
Q Consensus 80 ~~~P~s~---y~~I~~N~~~---glHTlvLLDi 106 (164)
++.|... .+.++.-.+. +-+|+||++.
T Consensus 142 g~~p~~~~~~~~~l~~l~~~~~~~~~t~vl~~~ 174 (242)
T 1wyz_A 142 GYLPIEPGERAKKLKTLEQRVYAESQTQLFIET 174 (242)
T ss_dssp EECCSSTTHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred EEcCCCccchHHHHHHHhcccccCCCeEEEEEc
Confidence 2233322 1233332222 1499999864
No 13
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=99.60 E-value=1.5e-15 Score=134.83 Aligned_cols=101 Identities=22% Similarity=0.171 Sum_probs=78.1
Q ss_pred chHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCc
Q 031196 4 EKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW 81 (164)
Q Consensus 4 ~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~ 81 (164)
+..+.+++.++ +++|++|+.|||++|+++.+++..+++.||++++|||+||++|+ +++|+|++.+|..-++.|.+.+.
T Consensus 281 ~i~~~l~~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~v~vvPGiSs~~aa~a~~Giplt~~~~~~~~~~vsg~~ 360 (457)
T 1pjq_A 281 EINQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCHAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLVTGHL 360 (457)
T ss_dssp HHHHHHHHHHHTTCEEEEEESBCTTTSSSHHHHHTTTTTTTCCEEEECCCCHHHHHHHHTTCCSCCTTTCSEEEEECC--
T ss_pred HHHHHHHHHHHCCCcEEEEeCCCCCccCCHHHHHHHHHHCCCCEEEeCCHhHHHHHHHHcCCCccCCCccceEEEEeCCC
Confidence 33456777776 58999999999999999999999999999999999999999998 99999999999866666655554
Q ss_pred ccCchHHHHHHHHhcCCccEEEEec
Q 031196 82 RPGSFYEKIKRNRSLGLHTLCLLDI 106 (164)
Q Consensus 82 ~P~s~y~~I~~N~~~glHTlvLLDi 106 (164)
++. .....+++..+-||+||++-
T Consensus 361 ~~~--~~~~~~~l~~~~~t~Vl~~~ 383 (457)
T 1pjq_A 361 KTG--GELDWENLAAEKQTLVFYMG 383 (457)
T ss_dssp ------CCCHHHHHSSSEEEEESSC
T ss_pred CCc--chhhHHHHhcCCCeEEEEcc
Confidence 432 11123556666799998654
No 14
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile}
Probab=99.59 E-value=1.1e-14 Score=119.97 Aligned_cols=102 Identities=17% Similarity=0.083 Sum_probs=72.7
Q ss_pred hchHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCc--eEEEecCC
Q 031196 3 EEKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGE--TVSIPFFT 78 (164)
Q Consensus 3 E~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~--~vtIpf~~ 78 (164)
|+..+.|++.++ +++||+|+.|||++|++..+++.++++.|+++++|||+||++|+ +++|+++..-|. .+.+.-..
T Consensus 64 ~~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~veviPGiSS~~aa~a~~G~plt~~~~~~~~~~~~~~ 143 (253)
T 4e16_A 64 QEIIDVMREGIENNKSVVRLQTGDFSIYGSIREQVEDLNKLNIDYDCTPGVSSFLGAASSLGVEYTVPEISQSVIITRME 143 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESBCTTTTCCHHHHHHHHHHHTCCEEEECCCCHHHHHHHHHTCCSCBTTTBSCEEEEEC-
T ss_pred HHHHHHHHHHHHCCCcEEEEeCCCCccccCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHhCCCcccCCccceEEEEecc
Confidence 344566777775 68999999999999999999999999999999999999999998 999999976543 34332111
Q ss_pred CCcccCchHHHHHHHHhcCCccEEEEec
Q 031196 79 ETWRPGSFYEKIKRNRSLGLHTLCLLDI 106 (164)
Q Consensus 79 ~~~~P~s~y~~I~~N~~~glHTlvLLDi 106 (164)
. -.|....+.+. .+..+-+|+|+++-
T Consensus 144 g-~~~~~~~~~~~-~l~~~~~t~vl~~~ 169 (253)
T 4e16_A 144 G-RTPVPEKESIQ-SYAKHQTSMVIFLS 169 (253)
T ss_dssp ---CCCCGGGSHH-HHHTTCSEEEEEEC
T ss_pred C-CCCcchHHHHH-HHhcCCCeEEEECc
Confidence 1 01111112232 34444589998874
No 15
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=99.55 E-value=3.7e-14 Score=117.99 Aligned_cols=72 Identities=21% Similarity=0.177 Sum_probs=62.2
Q ss_pred hchHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEE
Q 031196 3 EEKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSI 74 (164)
Q Consensus 3 E~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtI 74 (164)
|+.++.|++.++ +++||+|+.|||++|.+..+++.++.+.|+++++|||+||++|+ +++|+++...+..-++
T Consensus 63 ~~~~~~i~~~~~~G~~Va~L~~GDP~iyg~~~~l~~~l~~~gi~veviPGiSs~~aaaA~lG~plt~~~~~~~~ 136 (264)
T 3ndc_A 63 DAIIDTIAEAHAAGQDVARLHSGDLSIWSAMGEQLRRLRALNIPYDVTPGVPSFAAAAATLGAELTLPGVAQSV 136 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESBCTTSSCSHHHHHHHHHHTTCCEEEECCCCHHHHHHHHHTCCSCBTTTBCCE
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCCccccHHHHHHHHHHhCCCCEEEeCCHHHHHHHHHHhCCCccCCCceeEE
Confidence 345566777775 68999999999999999999999999999999999999999998 9999999876654343
No 16
>2npn_A Putative cobalamin synthesis related protein; COBF, PSI-2, MAD, struc genomics, SAM, S-adenosylmethionine, MCSG; HET: MSE SAM; 1.60A {Corynebacterium diphtheriae}
Probab=99.54 E-value=4.3e-15 Score=121.73 Aligned_cols=88 Identities=20% Similarity=0.345 Sum_probs=70.3
Q ss_pred HHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCC---CcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCcc
Q 031196 8 KILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLG---IQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWR 82 (164)
Q Consensus 8 ~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~g---i~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~ 82 (164)
.|.+.++ +++||+|+.|||++|+++.+++.++++.| +++++|||+||++|+ +++|+++..+++++++.
T Consensus 94 ~i~~~~~~g~~Vv~l~~GDP~iy~~~~~l~~~l~~~g~~~i~veviPGiSs~~aa~a~~g~pl~~~~~~~~~~------- 166 (251)
T 2npn_A 94 TIRERTPDDGAVAFLVWGDPSLYDSTLRIIEHMRNLEDLHADVKVIPGITAVQVLTAEHGILINRIGEAIHIT------- 166 (251)
T ss_dssp HHHHHSCTTCEEEEEESBCTTSSCCHHHHHHHHHHHHTCCEEEEEECCCCHHHHHHHHHTCCSSCTTCCCEEE-------
T ss_pred HHHHHHHCCCeEEEEeCCCcccccCHHHHHHHHHhcCCCCCcEEEeCChhHHHHHHHHcCCCcCCCCCeEEEE-------
Confidence 4556665 68999999999999999999999999887 999999999999998 99999999998888774
Q ss_pred cCchHHHHHHHHhcCCccEEEEe
Q 031196 83 PGSFYEKIKRNRSLGLHTLCLLD 105 (164)
Q Consensus 83 P~s~y~~I~~N~~~glHTlvLLD 105 (164)
|... ++.++....||+|+|.
T Consensus 167 ~g~~---l~~~l~~~~~t~vvl~ 186 (251)
T 2npn_A 167 TGRN---LPETSAKDRRNCVVML 186 (251)
T ss_dssp ETTT---GGGSCTTGGGEEEEES
T ss_pred ccch---hhHHHHhcCCcEEEEE
Confidence 1111 2223433448998764
No 17
>2zvb_A Precorrin-3 C17-methyltransferase; plasmid, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SAH; 2.00A {Thermus thermophilus} PDB: 2zvc_A*
Probab=99.50 E-value=8.4e-14 Score=118.20 Aligned_cols=113 Identities=21% Similarity=0.191 Sum_probs=84.1
Q ss_pred HHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhC--------------------CCcEEEEcCccHHHHH-HhhCC
Q 031196 6 ADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKL--------------------GIQVKAVHNASVMNAV-GICGL 63 (164)
Q Consensus 6 ~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~--------------------gi~vevIpGiSs~~A~-s~~GL 63 (164)
++.+++.++ +++||+|+.|||++|++...+...+++. |+++++|||+||++|+ +++|+
T Consensus 64 ~~~~l~~a~~G~~Va~L~~GDP~~yg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~gi~veVIPGiSS~~aaaA~lG~ 143 (295)
T 2zvb_A 64 AEEALERALSGQRVALVSGGDPGIYGMAAPVLELMEERGLKRVDGGVGLPGRFAGEEGEVFLAVIPGVTAANAVASLLGS 143 (295)
T ss_dssp HHHHHHHHHTTCEEEEEESBCTTSSSSHHHHHHHHHHTTCEECSCCCSSSEEEEETTEEEEEEEECCCCHHHHHHHTTEE
T ss_pred HHHHHHHHHCCCcEEEEeCCCCChhhhHHHHHHHHHHhcccccccccccccccccccCCCcEEEECCHhHHHHHHHHhCC
Confidence 456777665 5899999999999999999888887765 4999999999999998 99999
Q ss_pred cceecCceEEEecCCCCcccCchHHHHHHHH---hcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHH
Q 031196 64 QLYRFGETVSIPFFTETWRPGSFYEKIKRNR---SLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLE 140 (164)
Q Consensus 64 ~ly~fg~~vtIpf~~~~~~P~s~y~~I~~N~---~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle 140 (164)
++..- ...+++... ..+++.+...+ ..+-+|+||++.+.+ +|.+.+.+++++|++
T Consensus 144 plt~~--~~~is~~~~----~~~~~~l~~~l~~~~~~~~t~vl~~~~~~----------------~r~~~~~~i~~~L~~ 201 (295)
T 2zvb_A 144 PLAHD--TCLISLSDL----LTPWPLIERRLHAAGQGDFVVVLYNPQSK----------------RRDWQLRKSAEILLE 201 (295)
T ss_dssp TTSSC--EEEEECCCT----TSCHHHHHHHHHHHHHTTCEEEEESCCCS----------------SCTTHHHHHHHHHTT
T ss_pred CccCC--CeEEeCCCC----CCCHHHHHHHHHHhhcCCcEEEEEcCCcc----------------cchhhHHHHHHHHHh
Confidence 98532 234444221 12355555443 335589999887532 467889999998876
No 18
>3nut_A Precorrin-3 methylase; vitamin B12 pathway, cobalamin, methyltransferase, transfera; HET: SAH; 2.22A {Rhodobacter capsulatus}
Probab=99.42 E-value=1e-12 Score=107.94 Aligned_cols=93 Identities=14% Similarity=0.157 Sum_probs=69.7
Q ss_pred HHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHh----CCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCC
Q 031196 7 DKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKK----LGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTET 80 (164)
Q Consensus 7 ~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~----~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~ 80 (164)
+.+++.++ +++||+|+.|||++|++..+++..+.+ .|+++++|||+||++|+ +++|+++..-...++ |...
T Consensus 69 ~~li~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~~~~~gi~veviPGiSS~~aa~a~~G~plt~~~~~~s--~~~~- 145 (251)
T 3nut_A 69 THALEMAAEGRRVVVVSSGDPGVFAMASALFEALEAHPEHAGTEIRILPGITAMLAAAAAAGAPLGHDFCAIN--LSDN- 145 (251)
T ss_dssp HHHHHHHHTTCEEEEEESBCTTSSSHHHHHHHHHHHCGGGTTCCEEEECCCCHHHHHHHHHEETTSSSEEEEE--SCCT-
T ss_pred HHHHHHHHCCCeEEEEeCCCcccccCHHHHHHHHHhhcccCCCcEEEECCHHHHHHHHHHhCCCccCCeEEEE--ecCC-
Confidence 45777775 689999999999999999999999987 89999999999999998 999999954333333 3211
Q ss_pred cccCchHHHHHHHH---hcCCccEEEEe
Q 031196 81 WRPGSFYEKIKRNR---SLGLHTLCLLD 105 (164)
Q Consensus 81 ~~P~s~y~~I~~N~---~~glHTlvLLD 105 (164)
..+.+.+++.+ ..+-.|++++.
T Consensus 146 ---~~~~~~~~~~l~~l~~~~~tlvl~~ 170 (251)
T 3nut_A 146 ---LKPFEILEKRLRHAARGDFAMAFYN 170 (251)
T ss_dssp ---TSCHHHHHHHHHHHHHTTCEEEEES
T ss_pred ---CCChHHHHHHHHHHhCCCCEEEEEC
Confidence 12345554443 34436888765
No 19
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}
Probab=99.41 E-value=8.3e-13 Score=112.33 Aligned_cols=96 Identities=15% Similarity=0.079 Sum_probs=74.8
Q ss_pred chHHHHHhhcc-cCCeEEEe-cCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCC
Q 031196 4 EKADKILSESQ-ESNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTET 80 (164)
Q Consensus 4 ~~~~~I~~~a~-~~~VafLt-~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~ 80 (164)
+.++.|++.++ +++||+++ .|||++|.+..+++..+++.|++|++|||+|+++++ +++|+++.+| ++. +
T Consensus 76 ~~~~~li~~l~~G~~Va~lsdaGdP~i~~~g~~lv~~~~~~gi~v~viPGiSA~~aA~a~~Glp~~~f----~f~----g 147 (296)
T 3kwp_A 76 ERIPQLIAKLKQGMQIAQVSDAGMPSISDPGHELVNACIDAHIPVVPLPGANAGLTALIASGLAPQPF----YFY----G 147 (296)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSBCTTSSHHHHHHHHHHHHTTCCEEECCCCCHHHHHHHHHSSCCSSE----EEE----E
T ss_pred hHhHHHHHHHhcCceEEEeccCCCCCCCCCchHHHHHHHHcCCCeeeCCCcccchHHHHhccCCCCce----eEE----e
Confidence 44567888777 68999998 999999999999999999999999999999999988 9999998544 321 3
Q ss_pred cccCchH--HHHHHHHhcCCccEEEEecc
Q 031196 81 WRPGSFY--EKIKRNRSLGLHTLCLLDIR 107 (164)
Q Consensus 81 ~~P~s~y--~~I~~N~~~glHTlvLLDi~ 107 (164)
+.|.... ....+++...-+|+|++.-.
T Consensus 148 ~~p~~~~~r~~~l~~l~~~~~tlV~y~~~ 176 (296)
T 3kwp_A 148 FLDRKPKDRKAEIAGLAQRPETLIFYEAP 176 (296)
T ss_dssp ECCSSHHHHHHHHHTTTTCCSEEEEEECG
T ss_pred eccCCcHHHHHHHHHhhcCCceeEeeeCc
Confidence 3454332 23345566666899997653
No 20
>2bb3_A Cobalamin biosynthesis precorrin-6Y methylase (CB; beta, alpha-beta-alpha sandwich, structural genomics, PSI, P structure initiative; HET: SAH; 2.27A {Archaeoglobus fulgidus} SCOP: c.90.1.1
Probab=99.34 E-value=1.4e-12 Score=105.69 Aligned_cols=95 Identities=17% Similarity=0.217 Sum_probs=66.5
Q ss_pred hchHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCc
Q 031196 3 EEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW 81 (164)
Q Consensus 3 E~~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~ 81 (164)
++.+++|.+.+++++||+|+.|||++|+ +.+++.++ ..|+++++|||+||++|+ +++|+++.. ...+++....
T Consensus 76 ~~~~~~i~~~~~g~~Vv~L~~GDP~i~~-~~~~l~~~-~~~i~veviPGiSS~~aa~a~~g~pl~~---~~~vs~~~r~- 149 (221)
T 2bb3_A 76 GDEIRRIMEEGREREVAVISTGDPMVAG-LGRVLREI-AEDVEIKIEPAISSVQVALARLKVDLSE---VAVVDCHAKD- 149 (221)
T ss_dssp HHHHHHHHHHHHHSCEEEEESBCTTTTT-SHHHHHTS-CCSSEEEEECCCCHHHHHHHHHTCCGGG---EEEEEC-----
T ss_pred HHHHHHHHHhcCCCcEEEEeCCCCcccc-CHHHHHHh-cCCCCEEEECCHHHHHHHHHHhCCCcee---EEEEeecCCC-
Confidence 4456667654457999999999999975 77777666 459999999999999998 999999985 4555653221
Q ss_pred ccCchHHHHHHHHhcCCccEEEEeccc
Q 031196 82 RPGSFYEKIKRNRSLGLHTLCLLDIRV 108 (164)
Q Consensus 82 ~P~s~y~~I~~N~~~glHTlvLLDi~~ 108 (164)
+....+.+.. +-+++++++...
T Consensus 150 -~~~~l~~l~~----~~~~vvl~~~~~ 171 (221)
T 2bb3_A 150 -FDAELTELLK----YRHLLILADSHF 171 (221)
T ss_dssp -CCHHHHTHHH----HCEEEEEECTTC
T ss_pred -chHHHHHHhc----CCeEEEEECCCC
Confidence 2222333332 227888887653
No 21
>3nd1_A Precorrin-6A synthase/COBF protein; methyltransferase, deacetylase, transferase; HET: SAH; 1.50A {Rhodobacter capsulatus}
Probab=99.33 E-value=1.5e-12 Score=109.81 Aligned_cols=67 Identities=27% Similarity=0.374 Sum_probs=60.1
Q ss_pred HHHhhcc--cCCeEEEecCCCCccccHHHHHHHHHh-CCCcEEEEcCccHHHHH-HhhCCcceecCceEEE
Q 031196 8 KILSESQ--ESNVAFLVVGDPFGATTHTDLVVRAKK-LGIQVKAVHNASVMNAV-GICGLQLYRFGETVSI 74 (164)
Q Consensus 8 ~I~~~a~--~~~VafLt~GDP~~aTTH~~l~~ra~~-~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtI 74 (164)
.|++.++ +++||+|+.|||++|.+..+++.++.+ .|+++++|||+|+++|+ +++|+++..+++.+.+
T Consensus 115 ~i~~~l~~~G~~Va~l~~GDP~i~~~~~~l~~~l~~~~gi~veviPGiSs~~aa~a~~g~pl~~~~~~~~~ 185 (275)
T 3nd1_A 115 EITAHVPGLEGRVALLVWGDPSLYDSTLRIAERLKSRLPLTTKVIPGITAIQALCAAHAIPLNDIGAPVVI 185 (275)
T ss_dssp HHHHHCTTSCEEEEEEESBCTTSSCSHHHHHHTTTTTSSEEEEEECCCCHHHHHHHHHTCCSSCTTCCEEE
T ss_pred HHHHHHHhCCCeEEEEeCCCCcccchHHHHHHHHHHhcCCCEEEecCccHHHHHHHHcCCCCccCCcEEEE
Confidence 3667776 479999999999999999999999988 79999999999999998 9999999999866665
No 22
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=98.93 E-value=1.1e-09 Score=80.76 Aligned_cols=49 Identities=20% Similarity=0.286 Sum_probs=43.0
Q ss_pred chHHHHHhhcc-cCCeEEEe-cCCCCccccHHHHHHHHHhCCCcEEEEcCc
Q 031196 4 EKADKILSESQ-ESNVAFLV-VGDPFGATTHTDLVVRAKKLGIQVKAVHNA 52 (164)
Q Consensus 4 ~~~~~I~~~a~-~~~VafLt-~GDP~~aTTH~~l~~ra~~~gi~vevIpGi 52 (164)
+.++.+++.++ +++||+++ .|||++|+|+.+++.++++.|++|++|||.
T Consensus 67 ~~~~~i~~~~~~G~~V~~l~d~GdP~i~~~~~~l~~~~~~~gi~v~viPGp 117 (117)
T 3hh1_A 67 RAVRQVIELLEEGSDVALVTDAGTPAISDPGYTMASAAHAAGLPVVPVPGA 117 (117)
T ss_dssp HHHHHHHHHHHTTCCEEEEEETTSCGGGSTTHHHHHHHHHTTCCEEEEC--
T ss_pred HHHHHHHHHHHCCCeEEEEecCCcCeEeccHHHHHHHHHHCCCcEEEeCCC
Confidence 45677888887 58999999 899999999999999999999999999995
No 23
>3ffy_A Putative tetrapyrrole (corrin/porphyrin) methylas; structural genomics, APC62130.1, methyltransferase, PSI-2, P structure initiative; 2.00A {Bacteroides fragilis} PDB: 3fq6_A
Probab=90.44 E-value=0.24 Score=35.94 Aligned_cols=49 Identities=16% Similarity=0.137 Sum_probs=28.0
Q ss_pred cCccHHHHH-HhhCCcceecCceEEEecCCCCcccCch-HHHHHHHHhcCCccEEEEec
Q 031196 50 HNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSF-YEKIKRNRSLGLHTLCLLDI 106 (164)
Q Consensus 50 pGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~P~s~-y~~I~~N~~~glHTlvLLDi 106 (164)
||+|++.++ +.+|++..+ ++ | .++.|... -..-.+.+...-+|+|+..-
T Consensus 1 PG~sA~~~Al~~sGlp~~~----F~--F--~Gflp~~~~r~~~l~~la~~~~TlVfyes 51 (115)
T 3ffy_A 1 SNATAFVPALVASGLPNEK----FC--F--EGFLPQKKGRMTKLKSLVDEHRTMVFYES 51 (115)
T ss_dssp -CTTTHHHHHHHTTSCCSS----EE--E--EESCCSSTTHHHHHHHTTTCCSEEEEEEC
T ss_pred CchhHHHHHHHHcCCCCCc----EE--E--EeeCCCCccHHHHHHHHhCCCCeEEEEec
Confidence 899998877 999999553 22 2 25555422 11222344444478888543
No 24
>2z1d_A Hydrogenase expression/formation protein HYPD; [NIFE] hydrogenase maturation, [4Fe-4S] cluster, thiol redox binding protein; HET: CSW; 2.07A {Thermococcus kodakarensis}
Probab=69.42 E-value=9.3 Score=33.68 Aligned_cols=106 Identities=13% Similarity=0.159 Sum_probs=71.8
Q ss_pred hHHHHHhhcc---c--CCeEEEecCCCCcc-ccHHHHHHHHHhCCCcEEEEcCccHHHHH--HhhCCcceecCceEEEec
Q 031196 5 KADKILSESQ---E--SNVAFLVVGDPFGA-TTHTDLVVRAKKLGIQVKAVHNASVMNAV--GICGLQLYRFGETVSIPF 76 (164)
Q Consensus 5 ~~~~I~~~a~---~--~~VafLt~GDP~~a-TTH~~l~~ra~~~gi~vevIpGiSs~~A~--s~~GL~ly~fg~~vtIpf 76 (164)
..|..++.|. . .+|-|.|-||=|-- .+.. =+..|+..|-+|++|-. .+-|+ ++-+ ..-.|.|
T Consensus 75 ~ID~ai~LA~~~~~~~~~vi~~TfGDm~RVPGs~~-SL~~ara~GaDVRiVYS--plDAl~iA~~n-------P~k~VVF 144 (372)
T 2z1d_A 75 DIVAMQLIMRKAREEGEEIILTTFGDMYKIPTPMG-SFADLKSEGFDVRIVYG--IFDTYRIAKEN-------PDKTVVH 144 (372)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECTTGGGCCCTTC-CHHHHHHTTCEEEECSS--HHHHHHHHHHC-------TTSEEEE
T ss_pred HHHHHHHHHhhhcccCCCeEEEeccccccCCCCCC-CHHHHHhCCCCEEEEeC--HHHHHHHHHHC-------CCCeEEE
Confidence 4466666666 5 89999999997754 4443 35668999999999964 45554 5443 3335566
Q ss_pred CCCCcccCch--HHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHH
Q 031196 77 FTETWRPGSF--YEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEV 141 (164)
Q Consensus 77 ~~~~~~P~s~--y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~ 141 (164)
+--+|--+.| --.|++....|+..+-+|--. .+..-|++.||+-
T Consensus 145 faiGFETTaP~tA~~i~~a~~~~l~Nfsvl~~h---------------------~l~pPa~~all~~ 190 (372)
T 2z1d_A 145 FSPGFETTTAPAAGMLNVAAQEELENFKIYSVH---------------------RLTPPAVEVLLKQ 190 (372)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHTCSSEEEEEEE---------------------ECHHHHHHHHHHT
T ss_pred EeeChhhccHHHHHHHHHHHHcCCCCEEEEEec---------------------cccHHHHHHHHcC
Confidence 6655543322 446667777788888888765 5677888888863
No 25
>2z2u_A UPF0026 protein MJ0257; metal binding protein; 2.40A {Methanocaldococcus jannaschii}
Probab=61.60 E-value=20 Score=28.72 Aligned_cols=74 Identities=18% Similarity=0.191 Sum_probs=45.9
Q ss_pred CeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecCceEEEecCC--C----CcccC--chHH
Q 031196 17 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFT--E----TWRPG--SFYE 88 (164)
Q Consensus 17 ~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg~~vtIpf~~--~----~~~P~--s~y~ 88 (164)
+|+|--.|+|+.+---..++..+++.|+.+.+..+.+.-..+..+|+ ..+.|..-. + .+.+. ..++
T Consensus 130 ~i~~s~gGEPll~~~l~~li~~~~~~g~~~~l~TNG~~~~~l~~L~~------~~v~isld~~~~~~~~~i~~~~~~~~~ 203 (311)
T 2z2u_A 130 HVAISLSGEPTLYPYLDELIKIFHKNGFTTFVVSNGILTDVIEKIEP------TQLYISLDAYDLDSYRRICGGKKEYWE 203 (311)
T ss_dssp EEEECSSSCGGGSTTHHHHHHHHHHTTCEEEEEECSCCHHHHHHCCC------SEEEEECCCSSTTTC----CCCHHHHH
T ss_pred EEEEeCCcCccchhhHHHHHHHHHHCCCcEEEECCCCCHHHHHhCCC------CEEEEEeecCCHHHHHHHhCCccchHH
Confidence 35554269999987667888889999999999888776333455554 234444321 1 22232 3577
Q ss_pred HHHHHHhc
Q 031196 89 KIKRNRSL 96 (164)
Q Consensus 89 ~I~~N~~~ 96 (164)
.+.+|++.
T Consensus 204 ~v~~~i~~ 211 (311)
T 2z2u_A 204 SILNTLDI 211 (311)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77777654
No 26
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=59.07 E-value=6.4 Score=32.63 Aligned_cols=31 Identities=19% Similarity=0.324 Sum_probs=23.7
Q ss_pred CeEEEecCCCCccccHHHHHHHHHhCCCcEEE
Q 031196 17 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKA 48 (164)
Q Consensus 17 ~VafLt~GDP~~aTTH~~l~~ra~~~gi~vev 48 (164)
-|.|++.|||...+| ..++..+.+.|.++-=
T Consensus 22 li~yi~aGdP~~~~~-~~~~~~l~~~GaD~iE 52 (271)
T 3nav_A 22 FVPFVTIGDPNPEQS-LAIMQTLIDAGADALE 52 (271)
T ss_dssp EEEEEETTSSCHHHH-HHHHHHHHHTTCSSEE
T ss_pred EEEEEeCCCCCHHHH-HHHHHHHHHcCCCEEE
Confidence 488999999999876 6667777777766543
No 27
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=52.47 E-value=24 Score=26.36 Aligned_cols=38 Identities=21% Similarity=0.097 Sum_probs=28.5
Q ss_pred CeEEEecCCCCccccH-HHHHHHHHhCCCcEEEEcCccH
Q 031196 17 NVAFLVVGDPFGATTH-TDLVVRAKKLGIQVKAVHNASV 54 (164)
Q Consensus 17 ~VafLt~GDP~~aTTH-~~l~~ra~~~gi~vevIpGiSs 54 (164)
....++.|+|+..--+ ..++..+++.|+.+.+..+.+.
T Consensus 71 ~~i~~~GGEP~l~~~~l~~l~~~~~~~~~~i~i~Tng~~ 109 (245)
T 3c8f_A 71 GGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFV 109 (245)
T ss_dssp CEEEEEESCGGGGHHHHHHHHHHHHTTTCCEEEEECCCC
T ss_pred CeEEEECCCcCCCHHHHHHHHHHHHHcCCcEEEEeCCCc
Confidence 3456677999997655 5788889998998888775543
No 28
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=49.34 E-value=18 Score=28.82 Aligned_cols=38 Identities=18% Similarity=0.192 Sum_probs=26.2
Q ss_pred ccCCeEEEecC---C-CCccccHHHHHHHHHhCCCcEEEEcC
Q 031196 14 QESNVAFLVVG---D-PFGATTHTDLVVRAKKLGIQVKAVHN 51 (164)
Q Consensus 14 ~~~~VafLt~G---D-P~~aTTH~~l~~ra~~~gi~vevIpG 51 (164)
+...|+|+++| | |+.+.....+...+++.|+++.+...
T Consensus 4 ~~~~Ig~v~~~~~~d~~f~~~~~~gi~~~~~~~g~~~~~~~~ 45 (296)
T 2hqb_A 4 GGGMVGLLVEDTIDDQGWNRKAYEGLLNIHSNLDVDVVLEEG 45 (296)
T ss_dssp --CEEEEECCCC----CCTHHHHHHHHHHHHHSCCEEEEECC
T ss_pred CCcEEEEEECCCCCCCcHHHHHHHHHHHHHHHhCCeEEEEeC
Confidence 35678888864 6 77777666777778888888877654
No 29
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=46.94 E-value=31 Score=25.62 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=29.8
Q ss_pred HHhhcccCCeEEEecCCCCccccHHHHHHHHHhC-CCcEEEE
Q 031196 9 ILSESQESNVAFLVVGDPFGATTHTDLVVRAKKL-GIQVKAV 49 (164)
Q Consensus 9 I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~-gi~vevI 49 (164)
+++.|..-|.++|+-||- =+..++.+++++ |.+|.++
T Consensus 102 ~~~~a~~~d~~vLvSgD~----DF~plv~~lr~~~G~~V~v~ 139 (165)
T 2qip_A 102 AIEIAPDVDRVILVSGDG----DFSLLVERIQQRYNKKVTVY 139 (165)
T ss_dssp HHHHGGGCSEEEEECCCG----GGHHHHHHHHHHHCCEEEEE
T ss_pred HHHhhccCCEEEEEECCh----hHHHHHHHHHHHcCcEEEEE
Confidence 455566679999999994 456699999996 9999888
No 30
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=46.71 E-value=22 Score=26.08 Aligned_cols=36 Identities=17% Similarity=0.194 Sum_probs=28.8
Q ss_pred eEEEecCCCCccccHH-HHHHHHHhCCCcEEEEcCcc
Q 031196 18 VAFLVVGDPFGATTHT-DLVVRAKKLGIQVKAVHNAS 53 (164)
Q Consensus 18 VafLt~GDP~~aTTH~-~l~~ra~~~gi~vevIpGiS 53 (164)
-..++.|+|+..--.. +++..+++.|+.+.+.-|-+
T Consensus 6 ~v~~tGGEPll~~~~~~~l~~~~~~~g~~~~l~TNG~ 42 (182)
T 3can_A 6 GVTFCGGEPLLHPEFLIDILKRCGQQGIHRAVDTTLL 42 (182)
T ss_dssp CEEECSSTGGGSHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred EEEEEcccccCCHHHHHHHHHHHHHCCCcEEEECCCC
Confidence 3445779999987664 88899999999999996655
No 31
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=43.68 E-value=43 Score=24.71 Aligned_cols=102 Identities=8% Similarity=0.059 Sum_probs=60.9
Q ss_pred hchHHHHHhhccc-CCeEEEecCCCCccccHHHHHHHHH------hCCCcEEEEc-CccHHHHH-HhhCCcc-------e
Q 031196 3 EEKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAK------KLGIQVKAVH-NASVMNAV-GICGLQL-------Y 66 (164)
Q Consensus 3 E~~~~~I~~~a~~-~~VafLt~GDP~~aTTH~~l~~ra~------~~gi~vevIp-GiSs~~A~-s~~GL~l-------y 66 (164)
|+..+.+++...+ +.|-|+=.|--..... ++..+.. +.|+++..++ +.|.++|+ +-.+.+. .
T Consensus 28 ~~~~~~~~~~i~~a~~I~i~G~G~S~~~A~--~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~a~~~d~~~~~~~~~~~~~ 105 (196)
T 2yva_A 28 SRAAMTLVQSLLNGNKILCCGNGTSAANAQ--HFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQVRA 105 (196)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESTHHHHHHH--HHHHHHHTCSSSCCCCCCEEESSCCHHHHHHHTTSTTGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEeCchhhHHHH--HHHHHHhccccccCCCCceEeecCchHHHHHHhcCCCHHHHHHHHHHh
Confidence 4556666665553 6777776676443332 3334444 6789988886 46666666 4444431 1
Q ss_pred -ecCceEEEecCCCCcccCchHHHHHHHHhcCCccEEEEecc
Q 031196 67 -RFGETVSIPFFTETWRPGSFYEKIKRNRSLGLHTLCLLDIR 107 (164)
Q Consensus 67 -~fg~~vtIpf~~~~~~P~s~y~~I~~N~~~glHTlvLLDi~ 107 (164)
--.+.+-|.+-..+ ......+.++.-.++|..++.+=+-.
T Consensus 106 ~~~~~DvvI~iS~SG-~t~~~i~~~~~ak~~g~~vI~IT~~~ 146 (196)
T 2yva_A 106 LGHAGDVLLAISTRG-NSRDIVKAVEAAVTRDMTIVALTGYD 146 (196)
T ss_dssp HCCTTCEEEEECSSS-CCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cCCCCCEEEEEeCCC-CCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 12344555543333 33355778888888999999887754
No 32
>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A*
Probab=43.05 E-value=46 Score=28.82 Aligned_cols=82 Identities=12% Similarity=0.162 Sum_probs=46.3
Q ss_pred hchHHHHHhhcc----cCCeEEEecCC--CCccccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecCceEEEec
Q 031196 3 EEKADKILSESQ----ESNVAFLVVGD--PFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPF 76 (164)
Q Consensus 3 E~~~~~I~~~a~----~~~VafLt~GD--P~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg~~vtIpf 76 (164)
|+..++|.+..+ +-|.+|+|.|= =........+...|++.|+.+-. .+|.||
T Consensus 95 ~e~~~~i~~~l~~~~~~~d~vfi~ag~GGGTGtGa~pvia~~~ke~~~~~~~----------------------vvt~Pf 152 (389)
T 4ei7_A 95 VKHETKIFEAVKQEFEDRDFIWITCGLGGGTGTGALLKAIEMLYEHDYNFGL----------------------LLTLPR 152 (389)
T ss_dssp HHTHHHHHHHHHHHTTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCCEEE----------------------EEEECC
T ss_pred HHHHHHHHHHHHhhcCCccEEEEEecCCCCCccccHHHHHHHHHHcCCCEEE----------------------EEEeCC
Confidence 444555655443 67899999753 22223344566667777654332 468888
Q ss_pred CCCCc-ccCchHHHH---HHHHhcCCccEEEEecc
Q 031196 77 FTETW-RPGSFYEKI---KRNRSLGLHTLCLLDIR 107 (164)
Q Consensus 77 ~~~~~-~P~s~y~~I---~~N~~~glHTlvLLDi~ 107 (164)
..++- +-...+..| +.|.+ ..+||+++|=.
T Consensus 153 ~~Eg~~~~~~A~~~i~~l~~~~~-~vd~~ividN~ 186 (389)
T 4ei7_A 153 DAEALKVLENATSRIRSIAMNQE-AFGSIVLIDNA 186 (389)
T ss_dssp GGGHHHHHHHHHHHHHHHHHTGG-GSSEEEEEEHH
T ss_pred CcCchHHHHHHHHHHHHHHHHhc-cCCeEEEeccH
Confidence 76632 122234444 33333 35899998864
No 33
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=41.14 E-value=24 Score=28.37 Aligned_cols=37 Identities=16% Similarity=0.152 Sum_probs=21.0
Q ss_pred ccCCeEEEec----CC-CCccccHHHHHHHHHhCCCcEEEEc
Q 031196 14 QESNVAFLVV----GD-PFGATTHTDLVVRAKKLGIQVKAVH 50 (164)
Q Consensus 14 ~~~~VafLt~----GD-P~~aTTH~~l~~ra~~~gi~vevIp 50 (164)
+...|+|+++ +| |+.+.....+...+++.|+++.++.
T Consensus 3 ~~~~Ig~v~~~g~~~d~~f~~~~~~Gi~~~~~~~g~~~~~~~ 44 (318)
T 2fqx_A 3 GDFVVGMVTDSGDIDDKSFNQQVWEGISRFAQENNAKCKYVT 44 (318)
T ss_dssp CCCEEEEEESSSCTTSSSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCcEEEEEEcCCCCCCccHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 3456777764 35 5555444455555666677666553
No 34
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=38.56 E-value=15 Score=30.28 Aligned_cols=32 Identities=28% Similarity=0.387 Sum_probs=24.7
Q ss_pred CCeEEEecCCCCccccHHHHHHHHHhCCCcEEE
Q 031196 16 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKA 48 (164)
Q Consensus 16 ~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vev 48 (164)
--|.|+|.|||-..+| ..++....+.|.++-=
T Consensus 15 ali~yitaG~P~~~~t-~~~~~~l~~~GaD~iE 46 (252)
T 3tha_A 15 ANVAYTVLGYPNLQTS-EAFLQRLDQSPIDILE 46 (252)
T ss_dssp EEEEEEETTSSCHHHH-HHHHHTGGGSSCSEEE
T ss_pred CeEEEEeCCCCCHHHH-HHHHHHHHHcCCCEEE
Confidence 3588999999999987 5666667777877743
No 35
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=38.03 E-value=1.3e+02 Score=22.74 Aligned_cols=95 Identities=15% Similarity=0.098 Sum_probs=61.4
Q ss_pred HHHHhhcccCC-eEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcc-eecCceEEEecCCCCcccC
Q 031196 7 DKILSESQESN-VAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQL-YRFGETVSIPFFTETWRPG 84 (164)
Q Consensus 7 ~~I~~~a~~~~-VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~l-y~fg~~vtIpf~~~~~~P~ 84 (164)
++|-+..++.. .++++-=+-+...--.+|+..+++.|+++.++.|-=.--|+..+++.- -.|-.++.+-|. + -|.
T Consensus 11 ~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr~~g~~~~V~KNtL~~~Al~~~~~~~~~~l~G~~a~~fs-~--dp~ 87 (173)
T 2j01_J 11 ATLKENLERAQGSFFLVNYQGLPAKETHALRQALKQNGARLFVAKNTLIRLALKELGLPELDGLQGPSAVVFY-E--DPV 87 (173)
T ss_pred HHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHHHCCcEEEEehhHHHHHHHhcCCCCccccccCCEEEEEe-C--CHH
Confidence 44555556656 677776666777777889999999999999999865555665555443 114445566675 3 266
Q ss_pred chHHHHHHHHhcC-CccEEEE
Q 031196 85 SFYEKIKRNRSLG-LHTLCLL 104 (164)
Q Consensus 85 s~y~~I~~N~~~g-lHTlvLL 104 (164)
.+...+++..+.+ ...+.+.
T Consensus 88 ~~ak~l~~f~k~~~~~~l~ik 108 (173)
T 2j01_J 88 AAAKTLVQFAKSNPKGIPQVK 108 (173)
T ss_pred HHHHHHHHHHHhCCCCCeEEE
Confidence 6777777766543 1345543
No 36
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=33.72 E-value=62 Score=24.45 Aligned_cols=47 Identities=26% Similarity=0.287 Sum_probs=33.0
Q ss_pred chHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCc
Q 031196 4 EKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNA 52 (164)
Q Consensus 4 ~~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGi 52 (164)
++..+|++.--.-||+.++.-|---. --+.+.+|+++|++|-++-|-
T Consensus 66 enireiwerypqldvvvivttddkew--ikdfieeakergvevfvvynn 112 (162)
T 2l82_A 66 ENIREIWERYPQLDVVVIVTTDDKEW--IKDFIEEAKERGVEVFVVYNN 112 (162)
T ss_dssp HHHHHHHHHCTTCCEEEEEECCCHHH--HHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHhCCCCcEEEEEecCcHHH--HHHHHHHHHhcCcEEEEEecC
Confidence 45677888777777777765543222 246788999999999887553
No 37
>2fi9_A Outer membrane protein; bartonella hense protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bartonella henselae} SCOP: c.103.1.1
Probab=33.49 E-value=97 Score=22.49 Aligned_cols=64 Identities=19% Similarity=0.118 Sum_probs=42.3
Q ss_pred chHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecCce
Q 031196 4 EKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGET 71 (164)
Q Consensus 4 ~~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg~~ 71 (164)
+..+.++...-.=+|.++=-|.. ...-|-.++...+++||.||+.+- -+|+.-.++=+.+..+.
T Consensus 57 ~~l~~l~~~~p~pevliiGtG~~-~~~l~p~~~~~l~~~GI~vE~m~T---~aAcrtyNiL~~EgR~V 120 (128)
T 2fi9_A 57 EDISRVLEESDQIEVLLIGTGVE-LLRLPEELRVLLWEKRISSDTMST---GAAVRTFNVLLAEDRAV 120 (128)
T ss_dssp GGGHHHHHTGGGCSEEEEECTTS-CCCCCHHHHHHHHHTTCEEEEECH---HHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHhcCCCCCEEEECCCCC-CCCCCHHHHHHHHHcCCEEEEeCH---HHHHHHHHHHHhCCCcE
Confidence 34455655544467888888888 456678999999999999999953 34444444433333333
No 38
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=32.74 E-value=74 Score=25.83 Aligned_cols=38 Identities=26% Similarity=0.322 Sum_probs=29.8
Q ss_pred CeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccH
Q 031196 17 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASV 54 (164)
Q Consensus 17 ~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs 54 (164)
+|+|-..|+|+...--..++..+++.|+.+.+..+.+.
T Consensus 144 ~v~~sggGEPll~~~l~~ll~~~~~~g~~i~l~TNG~~ 181 (342)
T 2yx0_A 144 HAAISLSGEPMLYPYMGDLVEEFHKRGFTTFIVTNGTI 181 (342)
T ss_dssp EEEECSSSCGGGSTTHHHHHHHHHHTTCEEEEEECSCC
T ss_pred EEEEcCCCcccchhhHHHHHHHHHHCCCcEEEEcCCCc
Confidence 35554489999997667788888999999988877765
No 39
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=32.61 E-value=30 Score=28.43 Aligned_cols=29 Identities=21% Similarity=0.369 Sum_probs=22.0
Q ss_pred CeEEEecCCCCccccHHHHHHHHHhCCCcE
Q 031196 17 NVAFLVVGDPFGATTHTDLVVRAKKLGIQV 46 (164)
Q Consensus 17 ~VafLt~GDP~~aTTH~~l~~ra~~~gi~v 46 (164)
=+.|++.|||...+| ..++..+.+.|+++
T Consensus 20 li~yi~aGdP~~~~~-~~~~~~l~~~GaD~ 48 (267)
T 3vnd_A 20 FVPFVTIGDPSPELS-LKIIQTLVDNGADA 48 (267)
T ss_dssp EEEEEETTSSCHHHH-HHHHHHHHHTTCSS
T ss_pred EEEEEeCCCCCHHHH-HHHHHHHHHcCCCE
Confidence 588999999998876 56666667777544
No 40
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=28.21 E-value=57 Score=26.30 Aligned_cols=54 Identities=11% Similarity=-0.031 Sum_probs=36.4
Q ss_pred CCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecC
Q 031196 16 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFG 69 (164)
Q Consensus 16 ~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg 69 (164)
-.|+|++.|-+--......|....+++|.+|.++-+......+...|++....+
T Consensus 16 MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~ 69 (398)
T 4fzr_A 16 MRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGAGLPFAPTC 69 (398)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHTTCCEEEEE
T ss_pred eEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhCCCeeEecC
Confidence 368888876433333345788888899999999866432233467888776654
No 41
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=27.96 E-value=2.2e+02 Score=22.26 Aligned_cols=81 Identities=20% Similarity=0.267 Sum_probs=51.0
Q ss_pred eEEEecCCCCccccH--HHHHHHHHhCCCcEEEE---cCc---cHHHHHHhhCCcceecCceEEEecCCCCcccC-----
Q 031196 18 VAFLVVGDPFGATTH--TDLVVRAKKLGIQVKAV---HNA---SVMNAVGICGLQLYRFGETVSIPFFTETWRPG----- 84 (164)
Q Consensus 18 VafLt~GDP~~aTTH--~~l~~ra~~~gi~vevI---pGi---Ss~~A~s~~GL~ly~fg~~vtIpf~~~~~~P~----- 84 (164)
...+.-|+= .--|| ..+..||...|..|-++ .|. +-..++..+++.+..+|+ .|. |...
T Consensus 30 ~i~v~tG~G-kGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L~v~~~~~g~----gf~---~~~~~~~~~ 101 (196)
T 1g5t_A 30 IIIVFTGNG-KGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPHGVEFQVMAT----GFT---WETQNREAD 101 (196)
T ss_dssp CEEEEESSS-SCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGGTCEEEECCT----TCC---CCGGGHHHH
T ss_pred eEEEECCCC-CCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhCCcEEEEccc----ccc---cCCCCcHHH
Confidence 333344444 34344 45678899999999999 652 223445667899999998 332 3321
Q ss_pred -----chHHHHHHHHhcCCccEEEEec
Q 031196 85 -----SFYEKIKRNRSLGLHTLCLLDI 106 (164)
Q Consensus 85 -----s~y~~I~~N~~~glHTlvLLDi 106 (164)
.-++.+++-+..+-.-|++||=
T Consensus 102 ~~~a~~~l~~a~~~l~~~~yDlvILDE 128 (196)
T 1g5t_A 102 TAACMAVWQHGKRMLADPLLDMVVLDE 128 (196)
T ss_dssp HHHHHHHHHHHHHHTTCTTCSEEEEET
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 1244555566667789999984
No 42
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=27.10 E-value=67 Score=25.49 Aligned_cols=54 Identities=15% Similarity=0.164 Sum_probs=36.2
Q ss_pred CeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecCc
Q 031196 17 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGE 70 (164)
Q Consensus 17 ~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg~ 70 (164)
.|.|++.|-.--......|..+.+++|++|.++-+......+...|+..+.++.
T Consensus 6 ~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~~ 59 (402)
T 3ia7_A 6 HILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAAGAEVVLYKS 59 (402)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHTTCEEEECCC
T ss_pred EEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHcCCEEEeccc
Confidence 577777654333445566777788899999999764433344677887776553
No 43
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=26.72 E-value=96 Score=24.97 Aligned_cols=59 Identities=12% Similarity=0.104 Sum_probs=38.9
Q ss_pred hhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecC
Q 031196 11 SESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFG 69 (164)
Q Consensus 11 ~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg 69 (164)
+..+-..|.|++.|-.--..-...|....+++|.+|.++-+......+...|++...++
T Consensus 16 ~~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~G~~~~~~~ 74 (415)
T 3rsc_A 16 EGRHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAAGATVVPYQ 74 (415)
T ss_dssp ---CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCEEEECC
T ss_pred CcccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhcCCEEEecc
Confidence 33334578888876333335557788888999999999976554444566788776554
No 44
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=25.83 E-value=49 Score=25.53 Aligned_cols=34 Identities=9% Similarity=0.051 Sum_probs=15.7
Q ss_pred CCeEEEec------CCCCccccHHHHHHHHHhCCCcEEEE
Q 031196 16 SNVAFLVV------GDPFGATTHTDLVVRAKKLGIQVKAV 49 (164)
Q Consensus 16 ~~VafLt~------GDP~~aTTH~~l~~ra~~~gi~vevI 49 (164)
+.|+++++ .+|++..--..+...|++.|+.+.+.
T Consensus 7 ~~Igvi~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~ 46 (294)
T 3qk7_A 7 DAIALAYPSRPRVLNNSTFLEMISWIGIELGKRGLDLLLI 46 (294)
T ss_dssp CEEEEEEESCSGGGSCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred ceEEEEecCCCccccChhHHHHHHHHHHHHHHCCCEEEEE
Confidence 44555554 34444433334444455555555444
No 45
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=25.64 E-value=2.2e+02 Score=21.56 Aligned_cols=88 Identities=13% Similarity=0.112 Sum_probs=59.3
Q ss_pred HHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhC---CCcEEEEcCccHHHHHHhhCC---cceecCceEEEecCC-
Q 031196 6 ADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKL---GIQVKAVHNASVMNAVGICGL---QLYRFGETVSIPFFT- 78 (164)
Q Consensus 6 ~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~---gi~vevIpGiSs~~A~s~~GL---~ly~fg~~vtIpf~~- 78 (164)
.+++.+..++...++++-=+=+...--.+|+.++++. |+++.++.|-=.--|+..+|+ .-+ |-.++.+-|..
T Consensus 12 v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~~~~~g~~~~V~KNtL~~~Al~~~~~~~L~~~-l~G~~a~~fs~~ 90 (180)
T 1zav_A 12 VKEMSEIFKKTSLILFADFLGFTVADLTELRSRLREKYGDGARFRVVKNTLLNLALKNAEYEGYEEF-LKGPTAVLYVTE 90 (180)
T ss_dssp HHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHHHHTTSEEEEEECHHHHHHHHHHTTCCSCGGG-CSSSEEEEEESS
T ss_pred HHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHhcccCCeEEEEehHHHHHHHHccCChhhHHHh-CcCCEEEEEecC
Confidence 3456666667777777776667777778899999988 999999988655556654554 323 33444666754
Q ss_pred CCcccCchHHHHHHHHhc
Q 031196 79 ETWRPGSFYEKIKRNRSL 96 (164)
Q Consensus 79 ~~~~P~s~y~~I~~N~~~ 96 (164)
+ -|..+.+.+++..+.
T Consensus 91 ~--dp~~~ak~l~~f~k~ 106 (180)
T 1zav_A 91 G--DPVEAVKIIYNFYKD 106 (180)
T ss_dssp S--CTHHHHHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHHHh
Confidence 3 266667777776554
No 46
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=24.62 E-value=85 Score=24.25 Aligned_cols=25 Identities=20% Similarity=0.070 Sum_probs=10.3
Q ss_pred CCCccccHHHHHHHHHhCCCcEEEE
Q 031196 25 DPFGATTHTDLVVRAKKLGIQVKAV 49 (164)
Q Consensus 25 DP~~aTTH~~l~~ra~~~gi~vevI 49 (164)
+|+...-...+...|++.|+++.+.
T Consensus 14 ~~~~~~~~~gi~~~a~~~g~~~~~~ 38 (313)
T 3m9w_A 14 LERWQKDRDIFVKKAESLGAKVFVQ 38 (313)
T ss_dssp SSTTHHHHHHHHHHHHHTSCEEEEE
T ss_pred ChHHHHHHHHHHHHHHHcCCEEEEE
Confidence 4444433333344444444444443
No 47
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=23.89 E-value=1.6e+02 Score=21.30 Aligned_cols=35 Identities=20% Similarity=0.182 Sum_probs=29.6
Q ss_pred CCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEc
Q 031196 16 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVH 50 (164)
Q Consensus 16 ~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIp 50 (164)
=+|.++=-|+.....-+-.++...+++||.+++.+
T Consensus 62 ~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m~ 96 (122)
T 2ab1_A 62 VQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVLQ 96 (122)
T ss_dssp CSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEeC
Confidence 57888878888776577889999999999999995
No 48
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=23.35 E-value=62 Score=24.56 Aligned_cols=38 Identities=11% Similarity=0.144 Sum_probs=23.7
Q ss_pred cCCeEEEecC-------CCCccccHHHHHHHHHhCCCcEEEEcCc
Q 031196 15 ESNVAFLVVG-------DPFGATTHTDLVVRAKKLGIQVKAVHNA 52 (164)
Q Consensus 15 ~~~VafLt~G-------DP~~aTTH~~l~~ra~~~gi~vevIpGi 52 (164)
.+.|+|+++. +|++..-...+...|++.|+.+.+...-
T Consensus 8 ~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 52 (292)
T 3k4h_A 8 TKTLGLVMPSSASKAFQNPFFPEVIRGISSFAHVEGYALYMSTGE 52 (292)
T ss_dssp CCEEEEECSSCHHHHTTSTHHHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred CCEEEEEecCCccccccCHHHHHHHHHHHHHHHHcCCEEEEEeCC
Confidence 4567777655 5555555555566677777777766543
No 49
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=23.33 E-value=1.1e+02 Score=26.10 Aligned_cols=27 Identities=11% Similarity=0.258 Sum_probs=20.8
Q ss_pred eEEEecCCCCcccc--HHHHHHHHHhC-CC
Q 031196 18 VAFLVVGDPFGATT--HTDLVVRAKKL-GI 44 (164)
Q Consensus 18 VafLt~GDP~~aTT--H~~l~~ra~~~-gi 44 (164)
-.+++.|||+.... -..++.++++. ++
T Consensus 165 ~V~ltGGEPll~~d~~L~~il~~l~~~~~v 194 (416)
T 2a5h_A 165 DVLLSGGDALLVSDETLEYIIAKLREIPHV 194 (416)
T ss_dssp EEEEEESCTTSSCHHHHHHHHHHHHTSTTC
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHhcCCc
Confidence 46778999999876 66778888876 45
No 50
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=23.27 E-value=1.3e+02 Score=24.18 Aligned_cols=50 Identities=10% Similarity=0.151 Sum_probs=33.6
Q ss_pred HHHHhhcc--cCCeEEEecCCCCccccHHHHHHHHHhCCC--cEEEEcCccHHH
Q 031196 7 DKILSESQ--ESNVAFLVVGDPFGATTHTDLVVRAKKLGI--QVKAVHNASVMN 56 (164)
Q Consensus 7 ~~I~~~a~--~~~VafLt~GDP~~aTTH~~l~~ra~~~gi--~vevIpGiSs~~ 56 (164)
.++++.+. +-.-..++.|+|+..--..+++.++++.+. .+.+.-|.+.+.
T Consensus 56 ~~~i~~~~~~g~~~i~~tGGEPll~~~l~~li~~~~~~~~~~~i~i~TNG~ll~ 109 (340)
T 1tv8_A 56 ARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQIDGIEDIGLTTNGLLLK 109 (340)
T ss_dssp HHHHHHHHHTTCCEEEEESSCGGGSTTHHHHHHHHTTCTTCCEEEEEECSTTHH
T ss_pred HHHHHHHHHCCCCEEEEeCCCccchhhHHHHHHHHHhCCCCCeEEEEeCccchH
Confidence 34444443 223445588999998767788888888765 777776666554
No 51
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=23.15 E-value=48 Score=22.96 Aligned_cols=21 Identities=19% Similarity=0.271 Sum_probs=11.9
Q ss_pred HHHHHHHHhCCCcEEEEcCcc
Q 031196 33 TDLVVRAKKLGIQVKAVHNAS 53 (164)
Q Consensus 33 ~~l~~ra~~~gi~vevIpGiS 53 (164)
..++.++.+.|+++.++|...
T Consensus 82 ~~i~~~l~~~gv~v~~vP~~~ 102 (141)
T 3nkl_A 82 KVIIESLAKLHVEVLTIPNLD 102 (141)
T ss_dssp HHHHHHHHTTTCEEEECCCHH
T ss_pred HHHHHHHHHcCCeEEECCCHH
Confidence 345555566666666666544
No 52
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=23.05 E-value=1.1e+02 Score=24.49 Aligned_cols=53 Identities=17% Similarity=0.166 Sum_probs=36.3
Q ss_pred CCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHH-HHhhCCcceecC
Q 031196 16 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNA-VGICGLQLYRFG 69 (164)
Q Consensus 16 ~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A-~s~~GL~ly~fg 69 (164)
..|.|++.|.+--......|....+++|++|.++-+.. +.. +...|+..+.++
T Consensus 21 MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~-~~~~~~~~g~~~~~~~ 74 (412)
T 3otg_A 21 MRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEG-FAGTLRKLGFEPVATG 74 (412)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGG-GHHHHHHTTCEEEECC
T ss_pred eEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHH-HHHHHHhcCCceeecC
Confidence 36888886643333334578888889999999997654 333 366788777665
No 53
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus}
Probab=22.93 E-value=74 Score=26.67 Aligned_cols=42 Identities=12% Similarity=0.070 Sum_probs=27.5
Q ss_pred hHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEE
Q 031196 5 KADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAV 49 (164)
Q Consensus 5 ~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevI 49 (164)
.+.+++..|+ +.|.+.++ |-........+.+|.++|+.|.+|
T Consensus 123 ri~eli~~A~-~eI~i~~~--~~~l~~l~~~L~~a~~RGV~Vrvi 164 (342)
T 3qph_A 123 MFRESLYSAK-NEVIVVTP--SEFFETIREDLIKTLERGVTVSLY 164 (342)
T ss_dssp HHHHHHHHCS-SEEEEEEC--HHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHhhh-eEEEEEeC--HHHHHHHHHHHHHHHhCCCEEEEE
Confidence 3455666666 45555553 223455566777799999999998
No 54
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=22.85 E-value=1.6e+02 Score=21.61 Aligned_cols=66 Identities=5% Similarity=0.088 Sum_probs=44.6
Q ss_pred hHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecCceEEE
Q 031196 5 KADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSI 74 (164)
Q Consensus 5 ~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg~~vtI 74 (164)
..+.++...-.=+|.++=-|.-... -+-.++...+++||.||+.+ +-+|+.-.++=+.+..+.+..
T Consensus 57 ~l~~l~~~~p~pevliiGTG~~~~~-l~p~l~~~l~~~GI~vE~M~---T~aAcrTyNiL~~EgR~VaAa 122 (135)
T 2fvt_A 57 SLQRVFDNANAIDTLIVGTGADVWI-APRQLREALRGVNVVLDTMQ---TGPAIRTYNIMIGERRRVAAA 122 (135)
T ss_dssp TTHHHHHTTTSCSEEEEECTTSCCC-CCHHHHHHHHTTTCEEEEEC---HHHHHHHHHHHHHHTSCEEEE
T ss_pred HHHHHHhcCCCCCEEEEcCCCCCCc-CCHHHHHHHHHcCCEEEEeC---HHHHHHHHHHHHhCCCcEEEE
Confidence 3445555444467888888887764 67899999999999999995 334555555545554444443
No 55
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=22.80 E-value=39 Score=25.78 Aligned_cols=55 Identities=11% Similarity=0.186 Sum_probs=30.7
Q ss_pred hhccc-CCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEc--Ccc-----HHHHHHhhCCcceecC
Q 031196 11 SESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVH--NAS-----VMNAVGICGLQLYRFG 69 (164)
Q Consensus 11 ~~a~~-~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIp--GiS-----s~~A~s~~GL~ly~fg 69 (164)
+.|+. =+++.-...||-+. +-+.+|.++||+|++|= +.. .+......|++++.+.
T Consensus 56 ~~A~~sI~i~~y~~~~~~i~----~aL~~aa~rGV~Vrii~D~~~~~~~~~~~~~l~~~gi~v~~~~ 118 (196)
T 4ggj_A 56 LAARSSLELCLFAFSSPQLG----RAVQLLHQRGVRVRVITDCDYMALNGSQIGLLRKAGIQVRHDQ 118 (196)
T ss_dssp HTCSSEEEEEESCBCCHHHH----HHHHHHHHTTCEEEEEESSCCC---CCHHHHHHHTTCEEEECC
T ss_pred HHhheEEEEEEEEeCCHHHH----HHHHHHHHcCCcEEEEEecccccccHHHHHHHHhcCCCccccc
Confidence 34542 24444344554443 35677888999999983 221 1222356788776543
No 56
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=22.37 E-value=97 Score=24.97 Aligned_cols=53 Identities=13% Similarity=0.055 Sum_probs=35.8
Q ss_pred CCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecC
Q 031196 16 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFG 69 (164)
Q Consensus 16 ~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg 69 (164)
-.|+|++.|-+--...-..|....+++|.+|.++-+ .....+...|++.+..+
T Consensus 21 MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~G~~~~~~~ 73 (398)
T 3oti_A 21 MRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAAGLEVVDVA 73 (398)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTTTCEEEESS
T ss_pred CEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhCCCeeEecC
Confidence 468898876333333345788888899999999977 33333466787766555
No 57
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=22.35 E-value=66 Score=24.38 Aligned_cols=39 Identities=10% Similarity=0.109 Sum_probs=20.3
Q ss_pred HHHHHHHHhCCCcEEEEcCcc--HHH-H---HHhhCCcceecCce
Q 031196 33 TDLVVRAKKLGIQVKAVHNAS--VMN-A---VGICGLQLYRFGET 71 (164)
Q Consensus 33 ~~l~~ra~~~gi~vevIpGiS--s~~-A---~s~~GL~ly~fg~~ 71 (164)
...+..+...+++--++.+.+ ... . +...|+|+.-++..
T Consensus 51 ~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 95 (291)
T 3l49_A 51 VSQIQTLIAQKPDAIIEQLGNLDVLNPWLQKINDAGIPLFTVDTA 95 (291)
T ss_dssp HHHHHHHHHHCCSEEEEESSCHHHHHHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCcEEEecCC
Confidence 344445555566666654443 111 1 23457777776654
No 58
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=22.31 E-value=81 Score=24.44 Aligned_cols=12 Identities=8% Similarity=0.296 Sum_probs=6.1
Q ss_pred hhCCcceecCce
Q 031196 60 ICGLQLYRFGET 71 (164)
Q Consensus 60 ~~GL~ly~fg~~ 71 (164)
..|+|+.-++..
T Consensus 82 ~~giPvV~~~~~ 93 (330)
T 3uug_A 82 EQGIKVIAYDRL 93 (330)
T ss_dssp HTTCEEEEESSC
T ss_pred HCCCCEEEECCC
Confidence 345555555543
No 59
>4efa_G V-type proton ATPase subunit G; heterotrimer, peripheral stalk, vacuolar ATPase, hydrolase; 2.82A {Saccharomyces cerevisiae} PDB: 4dl0_K 2k88_A 2kwy_A
Probab=21.75 E-value=40 Score=24.83 Aligned_cols=18 Identities=28% Similarity=0.191 Sum_probs=14.0
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 031196 127 RYMTVNIAIEQLLEVELL 144 (164)
Q Consensus 127 r~Mt~~~A~~~Lle~e~~ 144 (164)
.-||-.++|.+||+.|++
T Consensus 4 ~~mSqs~GIQqLL~AEk~ 21 (119)
T 4efa_G 4 VPMSQKNGIATLLQAEKE 21 (119)
T ss_dssp ---CCHHHHHHHHHHHHH
T ss_pred CCcchhHHHHHHHHHHHH
Confidence 359999999999999876
No 60
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=21.65 E-value=87 Score=25.03 Aligned_cols=32 Identities=25% Similarity=0.298 Sum_probs=24.7
Q ss_pred CeEEEecCCCCccccHHHHHHHHHhCCCcEEEE
Q 031196 17 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAV 49 (164)
Q Consensus 17 ~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevI 49 (164)
-+.|++.|||-..+| ..+.....+.|++.--+
T Consensus 19 ~i~~i~~g~p~~~~~-~~~~~~l~~~G~D~IEl 50 (262)
T 2ekc_A 19 LVSYLMVGYPDYETS-LKAFKEVLKNGTDILEI 50 (262)
T ss_dssp EEEEEETTSSCHHHH-HHHHHHHHHTTCSEEEE
T ss_pred EEEEecCCCCChHHH-HHHHHHHHHcCCCEEEE
Confidence 588899999998765 66677777778877555
No 61
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=21.54 E-value=25 Score=26.68 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=22.2
Q ss_pred hhccc-CCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEc
Q 031196 11 SESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVH 50 (164)
Q Consensus 11 ~~a~~-~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIp 50 (164)
+.|+. =++++-..-|+-+. +-+.+|.++||+|++|=
T Consensus 68 ~~A~~sI~i~~Y~~~~~~I~----~aL~~Aa~RGV~VRii~ 104 (220)
T 4gel_A 68 DRAVYSIDLAIYTFTSLFLA----DSIKRALQRGVIIRIIS 104 (220)
T ss_dssp HTCSSEEEEECSCBCCHHHH----HHHHHHHHHTCEEEEEC
T ss_pred HHhhhEEEEEEEEeCCHHHH----HHHHHHHHcCCeEEEEE
Confidence 45553 35555444454443 34666888899999994
No 62
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=21.54 E-value=1e+02 Score=25.55 Aligned_cols=47 Identities=17% Similarity=0.135 Sum_probs=29.4
Q ss_pred HHHHHhhcccCCeE-EEecCCCCccc-----c---HHHHHHHHHhCCCcEEEEcCc
Q 031196 6 ADKILSESQESNVA-FLVVGDPFGAT-----T---HTDLVVRAKKLGIQVKAVHNA 52 (164)
Q Consensus 6 ~~~I~~~a~~~~Va-fLt~GDP~~aT-----T---H~~l~~ra~~~gi~vevIpGi 52 (164)
.+++++.+.+.++- ++..||=+-.. + ....+.+..+.|++|-+|+|=
T Consensus 49 l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~~~pv~~v~GN 104 (386)
T 3av0_A 49 FKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIKVYIVAGN 104 (386)
T ss_dssp HHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHTTCEEEECCCG
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEcCC
Confidence 45677777765554 44669943222 1 234455566668999999984
No 63
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=21.50 E-value=88 Score=24.11 Aligned_cols=33 Identities=6% Similarity=0.137 Sum_probs=24.4
Q ss_pred CeEEEecCC----CCccccHHHHHHHHHhCCCcEEEEc
Q 031196 17 NVAFLVVGD----PFGATTHTDLVVRAKKLGIQVKAVH 50 (164)
Q Consensus 17 ~VafLt~GD----P~~aTTH~~l~~ra~~~gi~vevIp 50 (164)
+|+|++.|. |..+++ ..+...++++|+++.++.
T Consensus 3 ~i~il~~~~~~~~~~~~s~-~~l~~a~~~~G~~v~~~d 39 (316)
T 1gsa_A 3 KLGIVMDPIANINIKKDSS-FAMLLEAQRRGYELHYME 39 (316)
T ss_dssp EEEEECSCGGGCCTTTCHH-HHHHHHHHHTTCEEEEEC
T ss_pred eEEEEeCcHHhCCcCCChH-HHHHHHHHHCCCEEEEEc
Confidence 578887773 344555 457888999999999985
No 64
>4g4s_O Proteasome chaperone 1; alpha beta, NTN-hydrolase, peptide binding, hydrolase-chaper complex; HET: LDZ; 2.49A {Saccharomyces cerevisiae}
Probab=21.01 E-value=1.6e+02 Score=24.87 Aligned_cols=81 Identities=17% Similarity=0.209 Sum_probs=51.9
Q ss_pred HhhCCcceecCceEEEecCCCCcc--cCchHHHHHHHHh----cCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHH
Q 031196 59 GICGLQLYRFGETVSIPFFTETWR--PGSFYEKIKRNRS----LGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVN 132 (164)
Q Consensus 59 s~~GL~ly~fg~~vtIpf~~~~~~--P~s~y~~I~~N~~----~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~ 132 (164)
..+-.++|.+|.++.|+-.. ++. |.=++..|.+.+- +.-|.+..|=.+.+.-+.+.+-.+...-.||.|.|--
T Consensus 118 ~~~~~pi~~~~d~l~v~i~e-N~l~~spI~~N~iaq~L~~~l~~~~~~i~ilgsSdri~~~K~~s~~~p~L~PP~fITG~ 196 (276)
T 4g4s_O 118 YGFSFPIYSFGKTLLFSMEE-NFISISPIFGNMISRSIISQLAQFSPDIIVIGTSDKIASMKVMTENECTLQPPEFITGF 196 (276)
T ss_dssp --CBCCEEESSSEEEEEECC-CTTTCCHHHHHHHHHHHHHHHHTTCCEEEEEEEETTCSSCEEEESSCCCCCTTCCBCSH
T ss_pred EEEeeeeEEcCcEEEEEEec-ccccccHHHHHHHHHHHHHHhhccCceEEEecchHHhhhhhhhccCCCCcCCcchhhhH
Confidence 45778999999999998644 333 3334566665433 2336666666666665666666777888999999854
Q ss_pred HHHHHHHHH
Q 031196 133 IAIEQLLEV 141 (164)
Q Consensus 133 ~A~~~Lle~ 141 (164)
- +.++.++
T Consensus 197 ~-asllsqL 204 (276)
T 4g4s_O 197 I-GSVLTQL 204 (276)
T ss_dssp H-HHHHHHH
T ss_pred H-HHHHHhh
Confidence 3 3444443
No 65
>3k2t_A LMO2511 protein; listeria monocytogenes,binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Listeria monocytogenes}
Probab=20.86 E-value=59 Score=20.95 Aligned_cols=15 Identities=20% Similarity=0.120 Sum_probs=12.2
Q ss_pred CCCCHHHHHHHHHHH
Q 031196 127 RYMTVNIAIEQLLEV 141 (164)
Q Consensus 127 r~Mt~~~A~~~Lle~ 141 (164)
+-||+.||+.||-.+
T Consensus 11 kpmsveEAv~qmel~ 25 (57)
T 3k2t_A 11 KPMDSEEAVLQMNLL 25 (57)
T ss_dssp CCBCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhC
Confidence 349999999998654
No 66
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=20.81 E-value=43 Score=28.19 Aligned_cols=39 Identities=18% Similarity=0.332 Sum_probs=28.0
Q ss_pred cCCeEEEecC---C-CCccccHHHHHHHHHhCC--CcEEEEcCcc
Q 031196 15 ESNVAFLVVG---D-PFGATTHTDLVVRAKKLG--IQVKAVHNAS 53 (164)
Q Consensus 15 ~~~VafLt~G---D-P~~aTTH~~l~~ra~~~g--i~vevIpGiS 53 (164)
...|+|+++| | |+.++.+-.+...+++.| +++..+.+.+
T Consensus 26 ~~kIglv~~g~i~D~~f~~~~~~G~~~~~~~~G~~~~~~~~e~~~ 70 (356)
T 3s99_A 26 KLKVGFIYIGPPGDFGWTYQHDQARKELVEALGDKVETTFLENVA 70 (356)
T ss_dssp CEEEEEECSSCGGGSSHHHHHHHHHHHHHHHHTTTEEEEEECSCC
T ss_pred CCEEEEEEccCCCchhHHHHHHHHHHHHHHHhCCceEEEEEecCC
Confidence 3579999987 5 666666666666677778 8877776654
No 67
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=20.73 E-value=79 Score=24.09 Aligned_cols=38 Identities=11% Similarity=0.144 Sum_probs=26.8
Q ss_pred cCCeEEEecC--CCCccccHHHHHHHHHhCCCc-EEEEcCc
Q 031196 15 ESNVAFLVVG--DPFGATTHTDLVVRAKKLGIQ-VKAVHNA 52 (164)
Q Consensus 15 ~~~VafLt~G--DP~~aTTH~~l~~ra~~~gi~-vevIpGi 52 (164)
.+.|+++++. +|++..-...+...|++.|+. +.+.+.-
T Consensus 10 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~ 50 (277)
T 3hs3_A 10 SKMIGIIIPDLNNRFYAQIIDGIQEVIQKEGYTALISFSTN 50 (277)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCEEEEEeCCCCChhHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4678888764 666666666677778888888 7766543
No 68
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=20.72 E-value=75 Score=25.70 Aligned_cols=36 Identities=11% Similarity=0.063 Sum_probs=26.9
Q ss_pred CCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCcc
Q 031196 16 SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNAS 53 (164)
Q Consensus 16 ~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiS 53 (164)
++-.|++.|||-..+|. .++..+.+.|.+.-.+ |+|
T Consensus 7 ~~~~~i~~gDP~~~~t~-~~~~~l~~~GaD~iel-G~S 42 (240)
T 1viz_A 7 TEWKHVFKLDPNKDLPD-EQLEILCESGTDAVII-GGS 42 (240)
T ss_dssp GGCCEEEEECTTSCCCH-HHHHHHHTSCCSEEEE-CC-
T ss_pred CcceEEEeeCCCccccH-HHHHHHHHcCCCEEEE-CCC
Confidence 45679999999999884 4556677779888877 444
No 69
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=20.37 E-value=89 Score=24.93 Aligned_cols=50 Identities=20% Similarity=0.173 Sum_probs=33.4
Q ss_pred CeEEEecCCCCccccH----HHHHHHHHhCCCcEEEEcCccHHHH-HHhhCCcceec-Cce
Q 031196 17 NVAFLVVGDPFGATTH----TDLVVRAKKLGIQVKAVHNASVMNA-VGICGLQLYRF-GET 71 (164)
Q Consensus 17 ~VafLt~GDP~~aTTH----~~l~~ra~~~gi~vevIpGiSs~~A-~s~~GL~ly~f-g~~ 71 (164)
.|+|++.| +..| ..|....+++|++|.++-+. .+.. +...|++.+.. |..
T Consensus 3 rIl~~~~~----~~gh~~~~~~la~~L~~~GheV~v~~~~-~~~~~~~~~g~~~~~~~~~~ 58 (391)
T 3tsa_A 3 RVLVVPLP----YPTHLMAMVPLCWALQASGHEVLIAAPP-ELQATAHGAGLTTAGIRGND 58 (391)
T ss_dssp EEEEECCS----CHHHHHTTHHHHHHHHHTTCEEEEEECH-HHHHHHHHBTCEEEEC----
T ss_pred EEEEEcCC----CcchhhhHHHHHHHHHHCCCEEEEecCh-hhHHHHHhCCCceeeecCCc
Confidence 47777765 3444 45777788999999998653 3433 46789888877 653
No 70
>3l7o_A Ribose-5-phosphate isomerase A; RPIA; 1.70A {Streptococcus mutans}
Probab=20.34 E-value=2e+02 Score=23.09 Aligned_cols=89 Identities=21% Similarity=0.219 Sum_probs=53.7
Q ss_pred ccCCeEEEecCCCCccccHHHHHHHHHhC----CCcEEEEcCccHHHH-HHhhCCcceecCce--EEEecCCC-CcccC-
Q 031196 14 QESNVAFLVVGDPFGATTHTDLVVRAKKL----GIQVKAVHNASVMNA-VGICGLQLYRFGET--VSIPFFTE-TWRPG- 84 (164)
Q Consensus 14 ~~~~VafLt~GDP~~aTTH~~l~~ra~~~----gi~vevIpGiSs~~A-~s~~GL~ly~fg~~--vtIpf~~~-~~~P~- 84 (164)
++.++.+|-.| ||-.+++.+..++ +.++.+||+.-.... +...|++++..++. +-+.|-.- .+-|.
T Consensus 17 ~dg~vIgLGsG-----ST~~~~i~~L~~~~~~~~~~i~~VttS~~t~~~l~~~Gi~l~~l~~~~~iD~a~dGADevd~~~ 91 (225)
T 3l7o_A 17 EDGMIVGLGTG-----STAYYFVEEVGRRVQEEGLQVIGVTTSSRTTAQAQALGIPLKSIDEVDSVDVTVDGADEVDPNF 91 (225)
T ss_dssp CTTCEEEECCS-----TTHHHHHHHHHHHHHHHCCCCEEEESSHHHHHHHHHHTCCBCCGGGSSCEEEEEECCSEECTTS
T ss_pred CCCCEEEECCc-----HHHHHHHHHHHHhhhhcCCCEEEEcCCHHHHHHHhccCceEEecCcccccCEEEEcCCccCccc
Confidence 34566665444 6667777765554 567777877544333 36789999988774 44444321 11121
Q ss_pred ---------chHHHHHHHHhcCCccEEEEecccC
Q 031196 85 ---------SFYEKIKRNRSLGLHTLCLLDIRVK 109 (164)
Q Consensus 85 ---------s~y~~I~~N~~~glHTlvLLDi~~~ 109 (164)
-..++|-..... ...|+.|-+.-
T Consensus 92 ~liKGgG~al~rEKiva~~A~--~~iviaD~sK~ 123 (225)
T 3l7o_A 92 NGIKGGGGALLMEKIVGTLTK--DYIWVVDESKM 123 (225)
T ss_dssp CEECCTTSCHHHHHHHHHTEE--EEEEEEEGGGB
T ss_pred CeecCchhhhHHHHHHHHhCC--eEEEEEecccc
Confidence 235677666555 78999998754
Done!