Query 031196
Match_columns 164
No_of_seqs 161 out of 444
Neff 4.8
Searched_HMMs 13730
Date Mon Mar 25 16:53:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031196.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031196hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wdea_ c.90.1.1 (A:) Diphthin 100.0 8.2E-33 6E-37 230.5 13.2 146 2-163 65-217 (289)
2 d2deka1 c.90.1.1 (A:1-265) Dip 99.9 1.1E-26 7.7E-31 190.9 14.5 146 3-163 64-211 (265)
3 d1vhva_ c.90.1.1 (A:) Diphthin 99.9 1.3E-26 9.6E-31 188.7 14.8 133 3-163 63-197 (251)
4 d1ve2a1 c.90.1.1 (A:1-235) Uro 99.6 6.7E-16 4.9E-20 120.5 8.9 81 3-83 65-147 (235)
5 d1s4da_ c.90.1.1 (A:) Uroporph 99.5 3.7E-14 2.7E-18 113.2 11.5 104 4-107 75-181 (265)
6 d1cbfa_ c.90.1.1 (A:) Cobalt p 99.5 1.3E-13 9.6E-18 106.8 12.4 103 5-108 70-175 (239)
7 d2bb3a1 c.90.1.1 (A:1-195) Pre 99.4 1.2E-13 8.8E-18 106.0 5.4 93 4-107 55-148 (195)
8 d1pjqa2 c.90.1.1 (A:216-457) S 99.4 5.2E-13 3.8E-17 103.5 9.1 75 5-79 67-143 (242)
9 d1wyza1 c.90.1.1 (A:2-234) Put 98.9 3E-09 2.2E-13 84.4 10.6 100 6-107 72-174 (233)
10 d1va0a1 c.90.1.1 (A:2-226) Hyp 98.6 6.1E-08 4.5E-12 73.0 7.2 91 11-107 70-162 (225)
11 d1w5fa1 c.32.1.1 (A:22-215) Ce 78.5 7.8 0.00057 28.8 9.4 100 3-137 72-174 (194)
12 d1qopa_ c.1.2.4 (A:) Trp synth 76.3 0.81 5.9E-05 36.1 3.1 43 6-49 4-50 (267)
13 d2vapa1 c.32.1.1 (A:23-231) Ce 69.8 9.7 0.0007 28.5 8.0 99 3-137 87-188 (209)
14 d1rq2a1 c.32.1.1 (A:8-205) Cel 66.0 9.8 0.00071 28.3 7.2 99 3-136 73-174 (198)
15 d2nzug1 c.93.1.1 (G:58-332) Gl 58.6 7.2 0.00052 27.9 5.1 41 15-55 3-45 (275)
16 d1ofua1 c.32.1.1 (A:11-208) Ce 56.6 19 0.0014 26.6 7.4 82 3-107 73-157 (198)
17 d1ii7a_ d.159.1.4 (A:) Mre11 { 55.9 8.4 0.00061 27.9 5.1 48 5-52 28-84 (333)
18 d1uf3a_ d.159.1.6 (A:) Hypothe 54.2 5.5 0.0004 27.4 3.6 48 5-52 20-72 (228)
19 d1tjya_ c.93.1.1 (A:) AI-2 rec 49.3 14 0.001 26.3 5.4 90 14-109 2-96 (316)
20 d1qs0b2 c.48.1.2 (B:206-339) 2 44.5 7.2 0.00052 27.0 2.9 71 15-94 15-87 (134)
21 d1pn3a_ c.87.1.5 (A:) TDP-epi- 43.5 14 0.001 27.0 4.7 55 17-71 2-56 (391)
22 d1gpma2 c.23.16.1 (A:3-207) GM 41.0 11 0.00081 26.7 3.6 42 13-58 3-44 (205)
23 d1dbqa_ c.93.1.1 (A:) Purine r 40.5 7 0.00051 27.9 2.3 26 24-49 11-36 (282)
24 d1gsoa2 c.30.1.1 (A:-2-103) Gl 40.1 5 0.00037 27.2 1.4 25 30-55 53-77 (105)
25 d1rd5a_ c.1.2.4 (A:) Trp synth 39.8 9.2 0.00067 29.6 3.1 34 15-49 17-50 (261)
26 d1wl8a1 c.23.16.1 (A:1-188) GM 39.1 21 0.0015 24.6 4.8 41 18-62 3-43 (188)
27 d2bfdb2 c.48.1.2 (B:205-342) B 36.2 14 0.001 25.4 3.4 71 15-92 15-89 (138)
28 d1iira_ c.87.1.5 (A:) UDP-gluc 32.2 48 0.0035 23.7 6.1 54 18-76 3-61 (401)
29 d1iloa_ c.47.1.1 (A:) MTH985, 30.5 28 0.002 22.1 3.8 48 18-66 4-54 (77)
30 d1w85b2 c.48.1.2 (B:193-324) P 29.1 22 0.0016 23.7 3.4 72 15-92 9-82 (132)
31 d1i5ea_ c.61.1.1 (A:) Uracil P 28.8 6.1 0.00044 29.7 0.2 41 17-64 124-167 (208)
32 d1l0wa2 d.74.4.1 (A:295-414) P 27.6 20 0.0014 24.3 2.8 34 3-36 74-109 (120)
33 d3beda1 c.54.1.1 (A:1-132) PTS 26.9 46 0.0033 22.5 4.8 52 4-58 47-98 (132)
34 d1umdb2 c.48.1.2 (B:188-324) B 26.4 24 0.0018 23.7 3.2 72 15-92 15-88 (137)
35 d1wu7a1 c.51.1.1 (A:330-426) H 26.1 38 0.0028 21.2 4.0 42 15-57 3-44 (97)
36 d2ozlb2 c.48.1.2 (B:192-329) E 26.0 26 0.0019 23.8 3.2 73 15-94 13-88 (138)
37 d2b4ya1 c.31.1.5 (A:36-302) NA 25.9 34 0.0025 25.5 4.2 31 19-49 209-239 (267)
38 d1ik6a2 c.48.1.2 (A:192-326) E 24.7 42 0.003 22.4 4.2 69 15-92 15-85 (135)
39 d1byra_ d.136.1.1 (A:) Nucleas 23.6 20 0.0015 23.7 2.2 37 9-50 21-59 (152)
40 d2yvta1 d.159.1.6 (A:4-260) Un 23.1 35 0.0026 23.2 3.6 48 5-52 17-95 (257)
41 d2nxfa1 d.159.1.12 (A:3-322) U 22.8 35 0.0026 23.5 3.5 47 9-55 41-97 (320)
42 d1p9oa_ c.72.3.1 (A:) Phosphop 22.8 36 0.0026 26.2 3.9 43 13-55 15-72 (290)
43 d1zpda1 c.31.1.3 (A:188-362) P 22.5 79 0.0058 21.6 5.5 49 3-51 9-58 (175)
44 d1p3y1_ c.34.1.1 (1:) MrsD {Ba 22.2 38 0.0028 24.5 3.7 41 12-54 3-44 (183)
45 d1ygya2 c.23.12.1 (A:3-98,A:28 21.5 28 0.0021 23.3 2.7 51 7-58 34-102 (130)
46 d1gsaa1 c.30.1.3 (A:1-122) Pro 20.4 57 0.0042 21.7 4.2 58 20-81 4-66 (122)
47 d1qs0b1 c.36.1.7 (B:2-205) 2-o 20.2 94 0.0069 22.6 5.7 129 6-144 12-165 (204)
48 d1pd3a_ a.30.3.1 (A:) Nonstruc 20.2 30 0.0022 20.7 2.2 16 129-144 35-50 (54)
49 d2jfga2 c.59.1.1 (A:298-437) U 20.1 31 0.0023 23.5 2.7 28 2-29 93-120 (140)
No 1
>d1wdea_ c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum pernix [TaxId: 56636]}
Probab=99.98 E-value=8.2e-33 Score=230.49 Aligned_cols=146 Identities=29% Similarity=0.371 Sum_probs=129.4
Q ss_pred hhchHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCC
Q 031196 2 VEEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTET 80 (164)
Q Consensus 2 vE~~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~ 80 (164)
.|+..+.|++.|++++||+|+.|||++|+||.+++.+|++.||+|++|||+||++|+ |++|+|+|+||.++++||++.+
T Consensus 65 ~e~~~~~i~~~a~~~~va~L~~GDP~i~~~~~~l~~~~~~~gi~v~vIPGiSs~~aA~a~~Gl~~~~f~~~~sl~~~~~~ 144 (289)
T d1wdea_ 65 LEERSREIVSRALDAVVAVVTAGDPMVATTHSSLAAEALEAGVAVRYIPGVSGVQAARGATMLSFYRFGGTVTLPGPWRG 144 (289)
T ss_dssp HHTSHHHHTCCSSCCEEEEEESBCTTSSSSHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHTCCGGGEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCcccccHHHHHHHHHhcCCcEEEECCHhHHHHHHHHhCCCcccccEEEEeeeecCC
Confidence 356678899999999999999999999999999999999999999999999999988 9999999999999999999999
Q ss_pred cccCchHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHHhCC-----CCCCCcce
Q 031196 81 WRPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGE-----SGKAHELK 155 (164)
Q Consensus 81 ~~P~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~~~~-----~~~~~~~~ 155 (164)
|+|.|++++++.|+.+|+|||||+|++.. .+||.+.+|+.+|+++.++... ..+.+++.
T Consensus 145 ~~p~s~~~~i~~~~~~~l~tlvl~~~~~~----------------~~~m~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~ 208 (289)
T d1wdea_ 145 VTPISVARRIYLNLCAGLHTTALLDVDER----------------GVQLSPGQGVSLLLEADREYAREAGAPALLARLPS 208 (289)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEECBCTT----------------SCBCCHHHHHHHHHHHHHHHHHHHTSCCCGGGSCE
T ss_pred cCCCchHHHHHHHHHcCCchhhhhhcccc----------------CceeeHHHHHHHHHHHHHHHHHhccchhhhCCCCe
Confidence 99999999999999999999999999843 5799999999999999776432 23444444
Q ss_pred -eeeecccc
Q 031196 156 -IILKQLQT 163 (164)
Q Consensus 156 -~v~~~~~~ 163 (164)
+|+.++++
T Consensus 209 v~v~~~lg~ 217 (289)
T d1wdea_ 209 VLVEAGAGG 217 (289)
T ss_dssp EEEECCGGG
T ss_pred EEEEEeCCC
Confidence 56666664
No 2
>d2deka1 c.90.1.1 (A:1-265) Diphthine synthase, DphB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.94 E-value=1.1e-26 Score=190.92 Aligned_cols=146 Identities=38% Similarity=0.666 Sum_probs=131.4
Q ss_pred hchHHHHH-hhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecCceEEEecCCCCc
Q 031196 3 EEKADKIL-SESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETW 81 (164)
Q Consensus 3 E~~~~~I~-~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg~~vtIpf~~~~~ 81 (164)
|+..++++ +.+++++||+|+.|||++|+||.+++.++++.|++|++|||+|+++|++++|++.+.++.+++++|++.+|
T Consensus 64 ~~~~~~~~~~~~~g~~V~~l~~GDP~~~~~~~~l~~~~~~~~i~vevvPGiSs~~Aaaa~g~~~~~~~~~~s~~~~~~~~ 143 (265)
T d2deka1 64 ELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKFGKSATVAYPEGNW 143 (265)
T ss_dssp HHHHHHHTHHHHTTSEEEEEESBCTTTTSSTHHHHHHHHHTTCEEEEECCCCHHHHGGGGTCCGGGBCCCEEECCCBTTB
T ss_pred HHHHHHHHHHHHcCCCEEEEecCccccchhHHHHHHHHHhcCCCceecCCccHHHHHHHhCCCccccCceEEEEEeecCC
Confidence 44555544 66668999999999999999999999999999999999999999999988999999999999999999999
Q ss_pred ccCchHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcceee-eec
Q 031196 82 RPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELKII-LKQ 160 (164)
Q Consensus 82 ~P~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~~~~~~~~~~~~~v-~~~ 160 (164)
.|.+++++++.|+..|+|+++++|..... ++||++..|.++|+++.+...++.+++|+.|+ +.+
T Consensus 144 ~~~~~~e~i~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~a~~~L~ei~~~l~~~g~~~dtpv~v~~~ 208 (265)
T d2deka1 144 FPTSYYDVIKENAERGLHTLLFLDIKAEK---------------RMYMTANEAMELLLKVEDMKKGGVFTDDTLVVVLAR 208 (265)
T ss_dssp CCCHHHHHHHHHHHHTCBEEEEECEEGGG---------------TEECCHHHHHHHHHHHHHHHCCSSSCTTCEEEEEES
T ss_pred cCCcchhhHHHHHHcCCchhhhhhhcCcc---------------cEEecHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEE
Confidence 99999999999999999999999998654 67999999999999999999888888888754 456
Q ss_pred ccc
Q 031196 161 LQT 163 (164)
Q Consensus 161 ~~~ 163 (164)
+++
T Consensus 209 ~g~ 211 (265)
T d2deka1 209 AGS 211 (265)
T ss_dssp TTS
T ss_pred CCC
Confidence 654
No 3
>d1vhva_ c.90.1.1 (A:) Diphthine synthase, DphB {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.94 E-value=1.3e-26 Score=188.74 Aligned_cols=133 Identities=32% Similarity=0.580 Sum_probs=116.2
Q ss_pred hchHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCc
Q 031196 3 EEKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW 81 (164)
Q Consensus 3 E~~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~ 81 (164)
|+..+.|++.+++++||+|+.|||++|+||.+++.+++++|++|++|||+||++|+ |++|+++++|+.++++++.+
T Consensus 63 ~~~~~~i~~~~~~~~vv~L~~GDP~i~~~~~~l~~~~~~~gi~vevvPGiSs~~aaaa~~gl~~~~~~~~~~i~~~~--- 139 (251)
T d1vhva_ 63 EENSFRLIERAKSKSVVLLVPGDPMVATTHSAIKLEAERKGVKTRIIHGASISTAVCGLTGLHNYRFGKSATVSWHR--- 139 (251)
T ss_dssp TTTHHHHHHHHTTSEEEEEESBCTTSSSHHHHHHHHHHHTTCCEEEECCCCHHHHHHHHHCCCGGGBCCCEEECSSC---
T ss_pred HHHHHHHHHHhcCCcEEEEecCCccccchHHHHHHHHHHcCCCcEEEecchHHHHHHHHhCCCccccceeEeeeccC---
Confidence 56678899999999999999999999999999999999999999999999999998 99999999999999998743
Q ss_pred ccCchHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcce-eeeec
Q 031196 82 RPGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQLLEVELLQGESGKAHELK-IILKQ 160 (164)
Q Consensus 82 ~P~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~Lle~e~~~~~~~~~~~~~-~v~~~ 160 (164)
+.++++.+..|..+|+||+|++++. ++||++.+|+++||..+.. .+|+. +++.|
T Consensus 140 -~~~~~~~i~~~~~~~~~Tlv~~~~~------------------~~~~~~~~~~~~ll~~~~~------~~d~~v~vv~~ 194 (251)
T d1vhva_ 140 -SQTPVNVIKANRSIDAHTLLFLDLH------------------PEPMTIGHAVENLIAEDAQ------MKDLYAVGIAR 194 (251)
T ss_dssp -CSHHHHHHHHHHHTTCBEEEEECCS------------------SSCCCHHHHHHHHHHHCGG------GGGSEEEEEES
T ss_pred -CCCchhhHHHHHhcCCCcEEEeccc------------------cccchHHHHHHHHHHHcCC------CCCCcEEEEEe
Confidence 6678999999999999999999987 4689999999999875432 34444 44566
Q ss_pred ccc
Q 031196 161 LQT 163 (164)
Q Consensus 161 ~~~ 163 (164)
+++
T Consensus 195 lg~ 197 (251)
T d1vhva_ 195 AGS 197 (251)
T ss_dssp TTS
T ss_pred CCC
Confidence 654
No 4
>d1ve2a1 c.90.1.1 (A:1-235) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Thermus thermophilus [TaxId: 274]}
Probab=99.61 E-value=6.7e-16 Score=120.52 Aligned_cols=81 Identities=20% Similarity=0.186 Sum_probs=69.8
Q ss_pred hchHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCC
Q 031196 3 EEKADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTET 80 (164)
Q Consensus 3 E~~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~ 80 (164)
++..++|.+.++ +++|++++.|||++|+|+.+++.++.+.++++++||||||++|+ |++|+++++++...++.+.+..
T Consensus 65 ~~~~~~i~~~~~~g~~V~~l~~Gdp~~~~~~~~~~~~~~~~~i~veviPGiSs~~aaaa~~g~~~~~~~~~~~~~~~~~~ 144 (235)
T d1ve2a1 65 EAITARLIALAREGRVVARLKGGDPMVFGRGGEEALALRRAGIPFEVVPGVTSAVGALSALGLPLTHRGLARSFAVATGH 144 (235)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESBCTTSSTTHHHHHHHHHHHTCCEEEECCCCTTHHHHHHTTCCSCBTTTBSCEEEEESS
T ss_pred HHHHHHHHHHHHcCCeEEEEecccccccchHHHHHHHHhhCCCCEEEeccccHHHhhhhhcCCcccccccccccccccch
Confidence 344566777777 58999999999999999999999999999999999999999998 9999999999988888766554
Q ss_pred ccc
Q 031196 81 WRP 83 (164)
Q Consensus 81 ~~P 83 (164)
+..
T Consensus 145 ~~~ 147 (235)
T d1ve2a1 145 DPA 147 (235)
T ss_dssp CTT
T ss_pred hhc
Confidence 433
No 5
>d1s4da_ c.90.1.1 (A:) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Pseudomonas denitrificans [TaxId: 43306]}
Probab=99.52 E-value=3.7e-14 Score=113.18 Aligned_cols=104 Identities=12% Similarity=0.089 Sum_probs=79.5
Q ss_pred chHHHHHhhccc-CCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCc
Q 031196 4 EKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETW 81 (164)
Q Consensus 4 ~~~~~I~~~a~~-~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~ 81 (164)
+..+.+++.|++ ++|++|+.|||++|+++..+...+.+.|++++||||+|+++|+ +.+|++++.++.+-++.+.+..+
T Consensus 75 ~~~~~~~~~a~~G~~V~~l~~GDp~~~~~~~~~~~~~~~~~~~~eViPGiss~~aa~a~~g~~l~~~~~~~~~~~~~~~~ 154 (265)
T d1s4da_ 75 DISLRLVELARAGNRVLRLKGGDPFVFGRGGEEALTLVEHQVPFRIVPGITAGIGGLAYAGIPVTHREVNHAVTFLTGHD 154 (265)
T ss_dssp HHHHHHHHHHHTTCCEEEEESBCTTSSSSHHHHHHHHHTTTCCEEEECCCCTTTHHHHHTTCCSCCTTTCSEEEEEECCC
T ss_pred HHHHHHHHHHHCCCcEEEEecCCcccccchHHHHHHHHhcCCceEEecccccchhhHHHhhhhcccCCCceEEEEecCCC
Confidence 344567777774 8999999999999999999999999999999999999999998 99999999999888877666554
Q ss_pred ccCchHH-HHHHHHhcCCccEEEEecc
Q 031196 82 RPGSFYE-KIKRNRSLGLHTLCLLDIR 107 (164)
Q Consensus 82 ~P~s~y~-~I~~N~~~glHTlvLLDi~ 107 (164)
.+...-. .....+...-+|+++++-.
T Consensus 155 ~~~~~~~~~~l~~~~~~~~~~v~~~~~ 181 (265)
T d1s4da_ 155 SSGLVPDRINWQGIASGSPVIVMYMAM 181 (265)
T ss_dssp -------CCCHHHHHTTCSEEEEESCS
T ss_pred ccccccchHHHHHHhccCcceeccchH
Confidence 4332211 1123344455888887654
No 6
>d1cbfa_ c.90.1.1 (A:) Cobalt precorrin-4 methyltransferase CbiF {Bacillus megaterium [TaxId: 1404]}
Probab=99.49 E-value=1.3e-13 Score=106.77 Aligned_cols=103 Identities=17% Similarity=0.131 Sum_probs=80.9
Q ss_pred hHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCcc
Q 031196 5 KADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWR 82 (164)
Q Consensus 5 ~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~ 82 (164)
..+++.+.++ +++|+++..|||++|++|.++..++++.++++++|||+|+++++ +++|++++.++...++++.....+
T Consensus 70 ~~~~~~~~~~~g~~V~~l~~Gdp~~~~~~~~~~~~~~~~~~~~~vipGiss~~~a~a~~gi~~~~~~~~~~~~~~~~~~~ 149 (239)
T d1cbfa_ 70 MVGTMLDRMREGKMVVRVHTGDPAMYGAIMEQMVLLKREGVDIEIVPGVTSVFAAAAAAEAELTIPDLTQTVILTRAEGR 149 (239)
T ss_dssp HHHHHHHHHTTTCCEEEEESBCTTTTCCCHHHHHHHHHTTCEEEEECCCCHHHHHHHHTTCCSCBTTTBCCEEEEECCSS
T ss_pred HHHHHHHHhhcCceEEEeeccccccccccccccccccccceeeEeccCccchhhhhhhcCcccccCcceeeeeeecccCC
Confidence 3455665555 68999999999999999999999999999999999999999998 999999999999888877655444
Q ss_pred cCch-HHHHHHHHhcCCccEEEEeccc
Q 031196 83 PGSF-YEKIKRNRSLGLHTLCLLDIRV 108 (164)
Q Consensus 83 P~s~-y~~I~~N~~~glHTlvLLDi~~ 108 (164)
.... ...+ .+...+.++.++.....
T Consensus 150 ~~~~~~~~~-~~~~~~~~~~~~~~~~~ 175 (239)
T d1cbfa_ 150 TPVPEFEKL-TDLAKHKCTIALFLSST 175 (239)
T ss_dssp SCCCGGGCH-HHHHTTCSEEEEESCTT
T ss_pred CccchHHHH-HHHhhcccccccccccc
Confidence 3323 3334 44445558888876653
No 7
>d2bb3a1 c.90.1.1 (A:1-195) Precorrin-6y methylase CbiE {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.39 E-value=1.2e-13 Score=106.01 Aligned_cols=93 Identities=20% Similarity=0.224 Sum_probs=71.6
Q ss_pred chHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCcc
Q 031196 4 EKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWR 82 (164)
Q Consensus 4 ~~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~ 82 (164)
+....+++.+++++||||+.|||++|+|+.+++.++. +.++++|||+||++|+ |++|.++- +...+.+.. +
T Consensus 55 ~~~~~~~~~~~g~~vv~L~~GDP~iy~~~~~l~~~~~--~~~~eviPGiss~~aaaa~~~~p~~---~~~~i~~~~---~ 126 (195)
T d2bb3a1 55 DEIRRIMEEGREREVAVISTGDPMVAGLGRVLREIAE--DVEIKIEPAISSVQVALARLKVDLS---EVAVVDCHA---K 126 (195)
T ss_dssp HHHHHHHHHHHHSCEEEEESBCTTTTTSHHHHHTSCC--SSEEEEECCCCHHHHHHHHHTCCGG---GEEEEEC------
T ss_pred HHHHHHHHHHcCCCeEEEEcCCCcccchhHHHhhhhc--ccceecCCcchhhhhHHHHhcCCCC---CcEEEecCC---C
Confidence 4455677777889999999999999999999887764 5788999999999998 99999875 445554422 2
Q ss_pred cCchHHHHHHHHhcCCccEEEEecc
Q 031196 83 PGSFYEKIKRNRSLGLHTLCLLDIR 107 (164)
Q Consensus 83 P~s~y~~I~~N~~~glHTlvLLDi~ 107 (164)
.++.+...+..+-++++|+|..
T Consensus 127 ---~~~~~~~~l~~~~~~~vl~~~~ 148 (195)
T d2bb3a1 127 ---DFDAELTELLKYRHLLILADSH 148 (195)
T ss_dssp ----CCHHHHTHHHHCEEEEEECTT
T ss_pred ---ChHHHHHHhhcCCeEEEEeCCc
Confidence 2455666677777899998865
No 8
>d1pjqa2 c.90.1.1 (A:216-457) Siroheme synthase CysG, domains 4 and 5 {Salmonella typhimurium [TaxId: 90371]}
Probab=99.39 E-value=5.2e-13 Score=103.53 Aligned_cols=75 Identities=21% Similarity=0.214 Sum_probs=65.4
Q ss_pred hHHHHHhhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCC
Q 031196 5 KADKILSESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTE 79 (164)
Q Consensus 5 ~~~~I~~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~ 79 (164)
..+.+++.+. +++|++++.|||++|+++.+++.++++.++++++|||+||++++ ++.|++++.++.+.++.+...
T Consensus 67 ~~~~~~~~~~~g~~V~~l~~Gdp~~~~~~~~l~~~~~~~~~~v~vipGiss~~~aaa~~~~~~~~~~~~~~~~~~~~ 143 (242)
T d1pjqa2 67 INQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCHAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLVTG 143 (242)
T ss_dssp HHHHHHHHHHTTCEEEEEESBCTTTSSSHHHHHTTTTTTTCCEEEECCCCHHHHHHHHTTCCSCCTTTCSEEEEECC
T ss_pred HHHHHHHHHHCCCeEEEEeCCCcceecchhhHHHHHhhcCceEeecCCcchHHHHHHHhhhccccCCceeeeeeccc
Confidence 3455666555 58999999999999999999999999999999999999999987 999999999999888766543
No 9
>d1wyza1 c.90.1.1 (A:2-234) Putative methytransferase BT4190 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=98.93 E-value=3e-09 Score=84.39 Aligned_cols=100 Identities=13% Similarity=0.104 Sum_probs=68.1
Q ss_pred HHHHHhhcc-cCCeEEE-ecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCcc
Q 031196 6 ADKILSESQ-ESNVAFL-VVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWR 82 (164)
Q Consensus 6 ~~~I~~~a~-~~~VafL-t~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~ 82 (164)
..+|++.++ +++||++ -.|||.++.==..++..|.+.||+|++|||+|+.+|+ +.+|++..+|+-.-.+|+....-.
T Consensus 72 ~~~i~~~l~~g~~v~lvsDaG~P~IsDPG~~lV~~~~~~gi~v~iiPG~SA~~aA~s~sG~~~~~~~f~gfl~~~~~~~~ 151 (233)
T d1wyza1 72 ISGYLKPLAGGASMGVISEAGCPAVADPGADVVAIAQRQKLKVIPLVGPSSIILSVMASGFNGQSFAFHGYLPIEPGERA 151 (233)
T ss_dssp HHHHHHHHHTTCCEEEECC-------CHHHHHHHHHHHTTCCEEECCCCCHHHHHHHHHTSCSSSEEEEEECCSSTTHHH
T ss_pred hHHHHHHHhcCCeEEEEeccccccccchhhhhhhhhhcccccccccccCcchheeeeeccccccccccceeeeeecCccc
Confidence 345666655 6899998 5699999988899999999999999999999999988 999999999999988888554321
Q ss_pred cCchHHHHHHHHhcCCccEEEEecc
Q 031196 83 PGSFYEKIKRNRSLGLHTLCLLDIR 107 (164)
Q Consensus 83 P~s~y~~I~~N~~~glHTlvLLDi~ 107 (164)
. ....+..+....-.|+|++.--
T Consensus 152 ~--~~~~l~~~~~~~~~t~v~~e~~ 174 (233)
T d1wyza1 152 K--KLKTLEQRVYAESQTQLFIETP 174 (233)
T ss_dssp H--HHHHHHHHHHHHTCEEEEEECG
T ss_pred c--hhhhhhhhhhccCceeEEEecc
Confidence 1 1222222222222688876543
No 10
>d1va0a1 c.90.1.1 (A:2-226) Hypothetical protein TTHA0667 {Thermus thermophilus [TaxId: 274]}
Probab=98.57 E-value=6.1e-08 Score=72.98 Aligned_cols=91 Identities=14% Similarity=0.013 Sum_probs=65.3
Q ss_pred hhcc-cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCCCcccCchHH
Q 031196 11 SESQ-ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTETWRPGSFYE 88 (164)
Q Consensus 11 ~~a~-~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~~~~P~s~y~ 88 (164)
+.+. .+.++++..|||++++++..+....+..++.+++|||+|+++++ ++.+.+.+..+......-+... -.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ipgiss~~~a~~~~~~~~~~~~~~~~~~~~~~~------~~ 143 (225)
T d1va0a1 70 RHARAHPFVVRLKGGDPMVFGRGGEEVLFLLRHGVPVEVVPGVTSLLASGLPLTHRGLAHGFAAVSGVLEGG------GY 143 (225)
T ss_dssp HHHHTSSEEEEEESBCTTSSSSHHHHHHHHHHTTCCEEEECCCCGGGTTCCCSSBTTTBSEEEEEESSCGGG------CC
T ss_pred HHhhccceEEEecCCcccccchhHHHHhhhccccceEEECCcccHHHHHhhccccCccccceeEEEeecCCc------ch
Confidence 3334 46778888899999999999999999999999999999999988 8899988877666544321111 11
Q ss_pred HHHHHHhcCCccEEEEecc
Q 031196 89 KIKRNRSLGLHTLCLLDIR 107 (164)
Q Consensus 89 ~I~~N~~~glHTlvLLDi~ 107 (164)
....++..+.+++++++..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~ 162 (225)
T d1va0a1 144 PDLRPFARVPTLVVLMGVG 162 (225)
T ss_dssp CCCTTTTTCSSEEEESCST
T ss_pred hHHHHHhhcccceeeeccc
Confidence 1123456665666665544
No 11
>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}
Probab=78.47 E-value=7.8 Score=28.76 Aligned_cols=100 Identities=22% Similarity=0.262 Sum_probs=59.1
Q ss_pred hchHHHHHhhcccCCeEEEecCC--CCccccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecCceEEEecCCCC
Q 031196 3 EEKADKILSESQESNVAFLVVGD--PFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTET 80 (164)
Q Consensus 3 E~~~~~I~~~a~~~~VafLt~GD--P~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg~~vtIpf~~~~ 80 (164)
|+..++|.+...+-|++|++.|= -....-=..+.+-|++.|+.|- -.+|.||..++
T Consensus 72 ~e~~~~I~~~l~~~d~vfi~AGlGGgTGtgaapviA~~ake~g~lvv----------------------~ivtlPF~~EG 129 (194)
T d1w5fa1 72 LESEEKIREVLQDTHMVFITAGFGGGTGTGASPVIAKIAKEMGILTV----------------------AIVTTPFYFEG 129 (194)
T ss_dssp HHTHHHHHHHTTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEE----------------------EEEEECCGGGC
T ss_pred HHHHHHHHHHhcCCCeEEEEEecCCCcccchHHHHHHHHHHcCCceE----------------------EEEeechhhhH
Confidence 45557788888889999998752 2222111234444777665432 24799997765
Q ss_pred cc-cCchHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHH
Q 031196 81 WR-PGSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQ 137 (164)
Q Consensus 81 ~~-P~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~ 137 (164)
-+ -..-.+.| +.++.-.|+++++|=. +|.+. -++-||+.+|.+.
T Consensus 130 ~~r~~~A~~gl-~~L~~~~D~~Ivi~Nd-------~L~~~-----~~~~~~~~~AF~~ 174 (194)
T d1w5fa1 130 PERLKKAIEGL-KKLRKHVDTLIKISNN-------KLMEE-----LPRDVKIKDAFLK 174 (194)
T ss_dssp HHHHHHHHHHH-HHHHHTCSEEEEEEHH-------HHHTT-----SCTTCCHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHhhhhheehHH-------HHHHh-----cCCCCCHHHHHHH
Confidence 32 22233444 3455557999999864 22221 1345899998864
No 12
>d1qopa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Salmonella typhimurium [TaxId: 90371]}
Probab=76.28 E-value=0.81 Score=36.11 Aligned_cols=43 Identities=14% Similarity=0.284 Sum_probs=30.5
Q ss_pred HHHHHhhcccC----CeEEEecCCCCccccHHHHHHHHHhCCCcEEEE
Q 031196 6 ADKILSESQES----NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAV 49 (164)
Q Consensus 6 ~~~I~~~a~~~----~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevI 49 (164)
.+...++++.+ =|.|+|.|||-.-|| ..++..+.+.|+++-=+
T Consensus 4 i~~~f~~lk~~~~~ali~y~t~G~P~~~~~-~~~~~~l~~~GaDiiEl 50 (267)
T d1qopa_ 4 YENLFAQLNDRREGAFVPFVTLGDPGIEQS-LKIIDTLIDAGADALEL 50 (267)
T ss_dssp HHHHHHHHHHTTCCEEEEEEETTSSCHHHH-HHHHHHHHHTTCSSEEE
T ss_pred HHHHHHHHHHcCCceEEEEEeCcCCCHHHH-HHHHHHHHHcCCCEEEE
Confidence 34556665532 378999999997766 67777788888776544
No 13
>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=69.82 E-value=9.7 Score=28.53 Aligned_cols=99 Identities=23% Similarity=0.312 Sum_probs=58.5
Q ss_pred hchHHHHHhhcccCCeEEEecCCCCc--cccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecCceEEEecCCCC
Q 031196 3 EEKADKILSESQESNVAFLVVGDPFG--ATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTET 80 (164)
Q Consensus 3 E~~~~~I~~~a~~~~VafLt~GDP~~--aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg~~vtIpf~~~~ 80 (164)
|+..++|.+.+++-|++|++.|==-. .....-+...|+++|+.|-. .+|+||..++
T Consensus 87 ~e~~~~I~~~l~~~d~vfi~AGlGGGTGsgaapvia~~ake~g~lvv~----------------------ivtlPF~~EG 144 (209)
T d2vapa1 87 KESAEEIKAAIQDSDMVFITCGLGGGTGTGSAPVVAEISKKIGALTVA----------------------VVTLPFVMEG 144 (209)
T ss_dssp HHTHHHHHHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEEE----------------------EEEECCGGGC
T ss_pred HHHHHHHHHhccCCCEEEEEEeCCCCccccHHHHHHHHHHHcCCcEEE----------------------EEecchhhhh
Confidence 45557788888888999998753222 22223345557776654332 4799998764
Q ss_pred ccc-CchHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHHH
Q 031196 81 WRP-GSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIEQ 137 (164)
Q Consensus 81 ~~P-~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~~ 137 (164)
-+- ..--+.| +.++.-.++++++|=.. |.+ .+ | -|++.+|.+.
T Consensus 145 ~~r~~~A~~~l-~~l~~~~d~~Ivi~Nd~-------L~~---~~--~-~~~~~~af~~ 188 (209)
T d2vapa1 145 KVRMKNAMEGL-ERLKQHTDTLVVIPNEK-------LFE---IV--P-NMPLKLAFKV 188 (209)
T ss_dssp HHHHHHHHHHH-HHHHTTCSEEEEEEGGG-------HHH---HS--T-TCCHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHhhcceEecccHH-------HHH---hc--C-CCCHHHHHHH
Confidence 332 1222334 34555579999998752 222 11 2 3888888753
No 14
>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=66.03 E-value=9.8 Score=28.34 Aligned_cols=99 Identities=21% Similarity=0.199 Sum_probs=56.0
Q ss_pred hchHHHHHhhcccCCeEEEecCCCCcc-ccHHH-HHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecCceEEEecCCCC
Q 031196 3 EEKADKILSESQESNVAFLVVGDPFGA-TTHTD-LVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTET 80 (164)
Q Consensus 3 E~~~~~I~~~a~~~~VafLt~GDP~~a-TTH~~-l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg~~vtIpf~~~~ 80 (164)
|+..++|.+..++-|++|++.|===.. |.-.- +..-|++.|+-+- -.||.||..++
T Consensus 73 ~e~~~~I~~~l~~~d~vfi~AGlGGgTGtGaaPviA~iake~g~l~v----------------------~ivt~PF~~EG 130 (198)
T d1rq2a1 73 EDAKDEIEELLRGADMVFVTAGEGGGTGTGGAPVVASIARKLGALTV----------------------GVVTRPFSFEG 130 (198)
T ss_dssp HHTHHHHHHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHHTCEEE----------------------EEEEECCGGGC
T ss_pred HHHHHHHHHHhcCCCEEEEEEecCCCCCcchHHHHHHHHHHcCCcEE----------------------EEEecChHHHH
Confidence 455577888888899999998632222 22222 3334666665442 24799997764
Q ss_pred ccc-CchHHHHHHHHhcCCccEEEEecccCCchhhhhhcCCccCCCCCCCCHHHHHH
Q 031196 81 WRP-GSFYEKIKRNRSLGLHTLCLLDIRVKEPSLESLCRGKKLYEPPRYMTVNIAIE 136 (164)
Q Consensus 81 ~~P-~s~y~~I~~N~~~glHTlvLLDi~~~e~~~e~~~~g~~~~~~~r~Mt~~~A~~ 136 (164)
-+- ..--+.|+ .++.-.++++++|=+. |.+ .+ +..+|+.+|.+
T Consensus 131 ~~r~~~A~~gl~-~L~~~~D~~Ivi~Nd~-------L~~---~~--~~~~~~~~af~ 174 (198)
T d1rq2a1 131 KRRSNQAENGIA-ALRESCDTLIVIPNDR-------LLQ---MG--DAAVSLMDAFR 174 (198)
T ss_dssp HHHHHHHHHHHH-HHHHHCSEEEEEEHHH-------HTT---SS--CTTCCHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHhhCeEEEechhh-------HHh---hc--CCCCCHHHHHH
Confidence 322 11222332 3333469999998652 221 01 23489998884
No 15
>d2nzug1 c.93.1.1 (G:58-332) Glucose-resistance amylase regulator CcpA, C-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=58.61 E-value=7.2 Score=27.88 Aligned_cols=41 Identities=10% Similarity=0.054 Sum_probs=33.5
Q ss_pred cCCeEEEec--CCCCccccHHHHHHHHHhCCCcEEEEcCccHH
Q 031196 15 ESNVAFLVV--GDPFGATTHTDLVVRAKKLGIQVKAVHNASVM 55 (164)
Q Consensus 15 ~~~VafLt~--GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~ 55 (164)
.+.|+++++ .||+++.--..+...|++.|+.+.+.+.-...
T Consensus 3 t~tIgvvvp~l~~~f~~~~~~gi~~~~~~~g~~~~~~~~~~~~ 45 (275)
T d2nzug1 3 TTTVGVIIPDISNIFYAELARGIEDIATMYKYNIILSNSDQNQ 45 (275)
T ss_dssp CSEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECTTCH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCH
Confidence 478999976 79998877778888899999999888765544
No 16
>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}
Probab=56.62 E-value=19 Score=26.59 Aligned_cols=82 Identities=22% Similarity=0.229 Sum_probs=49.4
Q ss_pred hchHHHHHhhcccCCeEEEecCCCCcc-ccHH-HHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecCceEEEecCCCC
Q 031196 3 EEKADKILSESQESNVAFLVVGDPFGA-TTHT-DLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTET 80 (164)
Q Consensus 3 E~~~~~I~~~a~~~~VafLt~GDP~~a-TTH~-~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg~~vtIpf~~~~ 80 (164)
|+..++|.+..++-|++|++.|===.. |.-. -+..-|++.|+-|-- .||.||..++
T Consensus 73 ~e~~~~I~~~l~~~d~vfi~AGlGGGTGtgaapviA~~ake~g~lvva----------------------ivtlPF~~EG 130 (198)
T d1ofua1 73 LEDRERISEVLEGADMVFITTGMGGGTGTGAAPIIAEVAKEMGILTVA----------------------VVTRPFPFEG 130 (198)
T ss_dssp HHTHHHHHHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEEE----------------------EEEECCGGGC
T ss_pred HHHHHHHHHHhCCCCeEEEEecCCCCccccHHHHHHHHHHHcCCCEEE----------------------EEecchHHHH
Confidence 445577888888899999998532222 1111 244447777764432 4799998775
Q ss_pred ccc-CchHHHHHHHHhcCCccEEEEecc
Q 031196 81 WRP-GSFYEKIKRNRSLGLHTLCLLDIR 107 (164)
Q Consensus 81 ~~P-~s~y~~I~~N~~~glHTlvLLDi~ 107 (164)
-+- ..--+.++ .++.-.++++++|=+
T Consensus 131 ~~r~~~A~~gl~-~L~~~~d~~ivi~Nd 157 (198)
T d1ofua1 131 RKRMQIADEGIR-ALAESVDSLITIPNE 157 (198)
T ss_dssp HHHHHHHHHHHH-HHHTTCSEEEEEEHH
T ss_pred HHHHHHHHHHHH-HHHHHCCEEEEEehh
Confidence 432 12223343 344457999999875
No 17
>d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=55.94 E-value=8.4 Score=27.95 Aligned_cols=48 Identities=27% Similarity=0.309 Sum_probs=31.2
Q ss_pred hHHHHHhhcccCCe-EEEecCCCCcc-----cc---HHHHHHHHHhCCCcEEEEcCc
Q 031196 5 KADKILSESQESNV-AFLVVGDPFGA-----TT---HTDLVVRAKKLGIQVKAVHNA 52 (164)
Q Consensus 5 ~~~~I~~~a~~~~V-afLt~GDP~~a-----TT---H~~l~~ra~~~gi~vevIpGi 52 (164)
..+++++.|+++++ +++..||=+=. .+ ...++.++.+.|++|-+|||=
T Consensus 28 ~l~~iv~~a~~~~~D~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~~i~v~~i~GN 84 (333)
T d1ii7a_ 28 AFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFAIEGN 84 (333)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEEECCT
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHhhHHhcCCcEEEeCCC
Confidence 45667888887777 45567994321 11 123445567779999999984
No 18
>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]}
Probab=54.21 E-value=5.5 Score=27.36 Aligned_cols=48 Identities=8% Similarity=0.142 Sum_probs=32.1
Q ss_pred hHHHHHhhcccCCe-EEEecCCCCccc----cHHHHHHHHHhCCCcEEEEcCc
Q 031196 5 KADKILSESQESNV-AFLVVGDPFGAT----THTDLVVRAKKLGIQVKAVHNA 52 (164)
Q Consensus 5 ~~~~I~~~a~~~~V-afLt~GDP~~aT----TH~~l~~ra~~~gi~vevIpGi 52 (164)
..+++++.+.++++ +++..||=.-.. -...+..+.++.++++-.|+|=
T Consensus 20 ale~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~~~L~~~~~pv~~i~GN 72 (228)
T d1uf3a_ 20 ALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYVPGP 72 (228)
T ss_dssp HHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGGCSCEEEECCT
T ss_pred HHHHHHHHHhhcCCCEEEECCCCCCCCccchHHHHhhhhhccccceEEEEecC
Confidence 44678888886666 666779954221 1333455566779999999994
No 19
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=49.28 E-value=14 Score=26.31 Aligned_cols=90 Identities=18% Similarity=0.238 Sum_probs=54.9
Q ss_pred ccCCeEEEec--CCCCccccHHHHHHHHHhCCCcEEEE-cCccHHHH-HHhhCCcce-ecCceEEEecCCCCcccCchHH
Q 031196 14 QESNVAFLVV--GDPFGATTHTDLVVRAKKLGIQVKAV-HNASVMNA-VGICGLQLY-RFGETVSIPFFTETWRPGSFYE 88 (164)
Q Consensus 14 ~~~~VafLt~--GDP~~aTTH~~l~~ra~~~gi~vevI-pGiSs~~A-~s~~GL~ly-~fg~~vtIpf~~~~~~P~s~y~ 88 (164)
+.+.|+|+++ ++|++...-..+...|++.|+++.++ |+-.+..- ...+.--+. +..-.+..|. -+.....
T Consensus 2 ~~~kI~~i~~~~~npf~~~~~~g~~~~a~~~G~~v~~~~~~~~d~~~q~~~i~~~i~~~~dgIIi~~~-----~~~~~~~ 76 (316)
T d1tjya_ 2 SAERIAFIPKLVGVGFFTSGGNGAQEAGKALGIDVTYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAV-----SPDGLCP 76 (316)
T ss_dssp CCCEEEEECSSSSSHHHHHHHHHHHHHHHHHTCEEEECCCSSCCHHHHHHHHHHHHHTTCSEEEECCS-----SSSTTHH
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCHHHHHHHHHHHHhcCCCeeeeccc-----ccchhhh
Confidence 4578999975 89999988888888999999999886 44333322 121111111 2333333332 3445566
Q ss_pred HHHHHHhcCCccEEEEecccC
Q 031196 89 KIKRNRSLGLHTLCLLDIRVK 109 (164)
Q Consensus 89 ~I~~N~~~glHTlvLLDi~~~ 109 (164)
.+++..+.|. -++.+|-...
T Consensus 77 ~~~~a~~~gi-~vv~~d~~~~ 96 (316)
T d1tjya_ 77 ALKRAMQRGV-KILTWDSDTK 96 (316)
T ss_dssp HHHHHHHTTC-EEEEESSCCC
T ss_pred hhhhhhcccc-cceecccccc
Confidence 7777777773 4555666543
No 20
>d1qs0b2 c.48.1.2 (B:206-339) 2-oxoisovalerate dehydrogenase E1b, C-domain {Pseudomonas putida [TaxId: 303]}
Probab=44.51 E-value=7.2 Score=27.02 Aligned_cols=71 Identities=18% Similarity=0.215 Sum_probs=45.8
Q ss_pred cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH--HhhCCcceecCceEEEecCCCCcccCchHHHHHH
Q 031196 15 ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV--GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKR 92 (164)
Q Consensus 15 ~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~--s~~GL~ly~fg~~vtIpf~~~~~~P~s~y~~I~~ 92 (164)
++|+++++.| +++|..+.. |++.|+++++|.=.| +.-+ ..+.-.+-+.++.++| +++|.-.++=..|..
T Consensus 15 G~Ditiis~G----~~v~~a~~a-~~~~gi~~~vidl~~-l~PlD~~~i~~~~~kt~~vi~v---Ee~~~~gG~gs~i~~ 85 (134)
T d1qs0b2 15 GNDVSVLTYG----TTVYVAQVA-AEESGVDAEVIDLRS-LWPLDLDTIVESVKKTGRCVVV---HEATRTCGFGAELVS 85 (134)
T ss_dssp CSSCEEEECT----THHHHHHHH-HHHHCCCCEEEECSE-EESCCHHHHHHHHHHHSCEEEE---ESSCSTTSTHHHHHH
T ss_pred CCCEEEEEee----hHHHHHHHH-HhhcCcchhheeccc-cCCcchhhHHHHHhCCceEEEE---ecCccccchHHHHHH
Confidence 5799999999 456665544 566799999995333 2211 2222234466788888 788877777655554
Q ss_pred HH
Q 031196 93 NR 94 (164)
Q Consensus 93 N~ 94 (164)
.+
T Consensus 86 ~l 87 (134)
T d1qs0b2 86 LV 87 (134)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 21
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}
Probab=43.49 E-value=14 Score=26.96 Aligned_cols=55 Identities=15% Similarity=0.221 Sum_probs=33.2
Q ss_pred CeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecCce
Q 031196 17 NVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGET 71 (164)
Q Consensus 17 ~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg~~ 71 (164)
.|.|.+.|..-=-.=...|..+.+++|++|.++-.-....-+-..|++.+..|..
T Consensus 2 ril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~~~~~~~v~~~g~~~~~~~~~ 56 (391)
T d1pn3a_ 2 RVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVGVPMVPVGRA 56 (391)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCCEEECSSC
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEChhhHhHHHHCCCeEEECCcc
Confidence 3667777761000112347777888899998884433333346788888776654
No 22
>d1gpma2 c.23.16.1 (A:3-207) GMP synthetase {Escherichia coli [TaxId: 562]}
Probab=41.03 E-value=11 Score=26.70 Aligned_cols=42 Identities=14% Similarity=0.201 Sum_probs=28.3
Q ss_pred cccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH
Q 031196 13 SQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV 58 (164)
Q Consensus 13 a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~ 58 (164)
+.++.|+++--|+ ..||+ +.++.++.|++++|+|.=.+....
T Consensus 3 ~~~~kI~IiD~G~---~~~~~-I~r~lr~lg~~~~I~~~d~~~~~~ 44 (205)
T d1gpma2 3 IHKHRILILDFGS---QYTQL-VARRVRELGVYCELWAWDVTEAQI 44 (205)
T ss_dssp TTSSEEEEEECSC---TTHHH-HHHHHHHTTCEEEEEESCCCHHHH
T ss_pred CccCeEEEEECCc---hHHHH-HHHHHHHCCCEEEEECCCCCHHHH
Confidence 4567899999887 23333 445577789999999874443333
No 23
>d1dbqa_ c.93.1.1 (A:) Purine repressor (PurR), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=40.55 E-value=7 Score=27.91 Aligned_cols=26 Identities=8% Similarity=-0.069 Sum_probs=10.8
Q ss_pred CCCCccccHHHHHHHHHhCCCcEEEE
Q 031196 24 GDPFGATTHTDLVVRAKKLGIQVKAV 49 (164)
Q Consensus 24 GDP~~aTTH~~l~~ra~~~gi~vevI 49 (164)
++|+++..-..+...|++.|+.+.+.
T Consensus 11 ~~pf~~~~~~gi~~~~~~~gy~~~~~ 36 (282)
T d1dbqa_ 11 EAAYFAEIIEAVEKNCFQKGYTLILG 36 (282)
T ss_dssp TSHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 34444433333333444444444443
No 24
>d1gsoa2 c.30.1.1 (A:-2-103) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Escherichia coli [TaxId: 562]}
Probab=40.15 E-value=5 Score=27.21 Aligned_cols=25 Identities=20% Similarity=0.117 Sum_probs=15.1
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCccHH
Q 031196 30 TTHTDLVVRAKKLGIQVKAVHNASVM 55 (164)
Q Consensus 30 TTH~~l~~ra~~~gi~vevIpGiSs~ 55 (164)
+.+..++.-|++.+|+..+| |.-..
T Consensus 53 ~d~~~i~~~a~~~~idlvvi-GPE~p 77 (105)
T d1gsoa2 53 TDIPALLDFAQNEKIDLTIV-GPEAP 77 (105)
T ss_dssp TCHHHHHHHHHHTTCSEEEE-CSHHH
T ss_pred CcHHHHHHHHHHhCcCEEEE-CcHHH
Confidence 34556666677777776655 55443
No 25
>d1rd5a_ c.1.2.4 (A:) Trp synthase alpha-subunit {Maize (Zea mays) [TaxId: 4577]}
Probab=39.81 E-value=9.2 Score=29.58 Aligned_cols=34 Identities=24% Similarity=0.324 Sum_probs=24.6
Q ss_pred cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEE
Q 031196 15 ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAV 49 (164)
Q Consensus 15 ~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevI 49 (164)
..-|+|+|.|||-.-+| ..++....+.|+++-=+
T Consensus 17 ~~li~y~~aG~P~~~~~-~~~l~~l~~~G~DiiEl 50 (261)
T d1rd5a_ 17 TAFIPYITAGDPDLATT-AEALRLLDGCGADVIEL 50 (261)
T ss_dssp CEEEEEEETTSSCHHHH-HHHHHHHHHTTCSSEEE
T ss_pred CeEEEEEeCcCCCHHHH-HHHHHHHHHcCCCEEEE
Confidence 34689999999998876 56666667777655433
No 26
>d1wl8a1 c.23.16.1 (A:1-188) GMP synthase subunit A, GuaAA {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=39.08 E-value=21 Score=24.62 Aligned_cols=41 Identities=12% Similarity=0.285 Sum_probs=29.4
Q ss_pred eEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhC
Q 031196 18 VAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICG 62 (164)
Q Consensus 18 VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~G 62 (164)
|+++--||=++++ ++...++.|++++++|.-..+.-+....
T Consensus 3 I~iiD~g~~~~~~----i~~~L~~~G~~~~v~~~~~~~~~~~~~~ 43 (188)
T d1wl8a1 3 IVIMDNGGQYVHR----IWRTLRYLGVETKIIPNTTPLEEIKAMN 43 (188)
T ss_dssp EEEEECSCTTHHH----HHHHHHHTTCEEEEEETTCCHHHHHHTC
T ss_pred EEEEECCCcHHHH----HHHHHHHCCCeEEEEeCCCCHHHHhhhc
Confidence 6777778854443 6666788899999999877766664443
No 27
>d2bfdb2 c.48.1.2 (B:205-342) Branched-chain alpha-keto acid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.17 E-value=14 Score=25.36 Aligned_cols=71 Identities=21% Similarity=0.231 Sum_probs=41.0
Q ss_pred cCCeEEEecCCCCccccHHHHH--HHHH-hCCCcEEEEcCccHHHH-HHhhCCcceecCceEEEecCCCCcccCchHHHH
Q 031196 15 ESNVAFLVVGDPFGATTHTDLV--VRAK-KLGIQVKAVHNASVMNA-VGICGLQLYRFGETVSIPFFTETWRPGSFYEKI 90 (164)
Q Consensus 15 ~~~VafLt~GDP~~aTTH~~l~--~ra~-~~gi~vevIpGiSs~~A-~s~~GL~ly~fg~~vtIpf~~~~~~P~s~y~~I 90 (164)
++|+++++.| .|+ |..+. ..++ +.|+.+++|.=.+.--- ...+--++-+-|+.++| +++|.-.++=..|
T Consensus 15 G~DitIis~G-~~~---~~al~aa~~L~~~~gi~~~vid~~~l~PlD~~~i~~s~~kt~~livv---ee~~~~gG~gs~i 87 (138)
T d2bfdb2 15 GSDVTLVAWG-TQV---HVIREVASMAKEKLGVSCEVIDLRTIIPWDVDTICKSVIKTGRLLIS---HEAPLTGGFASEI 87 (138)
T ss_dssp CSSEEEEECT-THH---HHHHHHHHHHHHHHCCCEEEEECCEEESCCHHHHHHHHHHHSCEEEE---EEEESTTCHHHHH
T ss_pred CCeEEEEECh-HHH---HHHHHHHHHHHhcCCcceeeeeeccccccchHHHHHHhcccCeEEEe---cCccccccHHHHH
Confidence 5899999999 444 33332 3343 44999999965432210 11112223345578888 6777776665544
Q ss_pred HH
Q 031196 91 KR 92 (164)
Q Consensus 91 ~~ 92 (164)
.+
T Consensus 88 ~~ 89 (138)
T d2bfdb2 88 SS 89 (138)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 28
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}
Probab=32.21 E-value=48 Score=23.72 Aligned_cols=54 Identities=22% Similarity=0.407 Sum_probs=33.7
Q ss_pred eEEEecCC-----CCccccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecCceEEEec
Q 031196 18 VAFLVVGD-----PFGATTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPF 76 (164)
Q Consensus 18 VafLt~GD-----P~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg~~vtIpf 76 (164)
|.|.+.|. |++ .|..+.+++|.+|.++-.-..-..+-..|++.+..+.....++
T Consensus 3 il~~~~gt~Gh~~P~l-----ala~~L~~~Gh~V~~~~~~~~~~~v~~~g~~~~~i~~~~~~~~ 61 (401)
T d1iira_ 3 VLLATCGSRGDTEPLV-----ALAVRVRDLGADVRMCAPPDCAERLAEVGVPHVPVGPSARAPI 61 (401)
T ss_dssp EEEECCSCHHHHHHHH-----HHHHHHHHTTCEEEEEECGGGHHHHHHTTCCEEECCC------
T ss_pred EEEECCCChhHHHHHH-----HHHHHHHHCCCEEEEEeCcchHHHHHHcCCeEEECCcchhhhh
Confidence 56666664 433 3777788899999988654444445778998887776554443
No 29
>d1iloa_ c.47.1.1 (A:) MTH985, a thioredoxin {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=30.54 E-value=28 Score=22.14 Aligned_cols=48 Identities=17% Similarity=0.194 Sum_probs=33.9
Q ss_pred eEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH---HhhCCcce
Q 031196 18 VAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV---GICGLQLY 66 (164)
Q Consensus 18 VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~---s~~GL~ly 66 (164)
+=+|.+|.|.+..+......-+++.|++.++. -++-+..+ +.+..|--
T Consensus 4 IkVlg~gC~~C~~~~~~v~~a~~e~gi~a~v~-kv~d~~ei~~ygVmstPal 54 (77)
T d1iloa_ 4 IQIYGTGCANCQMLEKNAREAVKELGIDAEFE-KIKEMDQILEAGLTALPGL 54 (77)
T ss_dssp EEEECSSSSTTHHHHHHHHHHHHHTTCCEEEE-EECSHHHHHHHTCSSSSCE
T ss_pred EEEeCCCCccHHHHHHHHHHHHHHcCCceEEE-EeCCHHHHHHcCCcCCCEE
Confidence 44568899999998888877788999988875 34555544 44444433
No 30
>d1w85b2 c.48.1.2 (B:193-324) Pyruvate dehydrogenase E1-beta, PdhB, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=29.06 E-value=22 Score=23.69 Aligned_cols=72 Identities=13% Similarity=0.194 Sum_probs=43.3
Q ss_pred cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH--HhhCCcceecCceEEEecCCCCcccCchHHHHHH
Q 031196 15 ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV--GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKR 92 (164)
Q Consensus 15 ~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~--s~~GL~ly~fg~~vtIpf~~~~~~P~s~y~~I~~ 92 (164)
++||++++.| +|+... .......++.||.+++|.=.+. .-+ ..+--.+-+-++.+++ +++|...++-..|.+
T Consensus 9 G~dvtIis~G-~~~~~a-l~Aa~~L~~~gi~~~vid~~~l-kPlD~~~i~~~~~kt~~vivv---eE~~~~gG~gs~i~~ 82 (132)
T d1w85b2 9 GKDITIIAYG-AMVHES-LKAAAELEKEGISAEVVDLRTV-QPLDIETIIGSVEKTGRAIVV---QEAQRQAGIAANVVA 82 (132)
T ss_dssp CSSEEEEECT-THHHHH-HHHHHHHHHTTCCEEEEECSEE-ESCCHHHHHHHHHHHSCEEEE---EEEETTSSSHHHHHH
T ss_pred CCCEEEEECh-HHHHHH-HHHHHHHHhcCCCeEEEeeecc-CCcchhhhhHHHhccCCeeEE---ecccccccHHHHHHH
Confidence 6899999999 444432 2223446677999999954433 111 1111223345678888 777877777655544
No 31
>d1i5ea_ c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldolyticus [TaxId: 1394]}
Probab=28.79 E-value=6.1 Score=29.66 Aligned_cols=41 Identities=24% Similarity=0.289 Sum_probs=24.6
Q ss_pred CeEEEecCCCCccc--cHHHHHHHHHhCCCcEEEEcCccHHHHH-HhhCCc
Q 031196 17 NVAFLVVGDPFGAT--THTDLVVRAKKLGIQVKAVHNASVMNAV-GICGLQ 64 (164)
Q Consensus 17 ~VafLt~GDP~~aT--TH~~l~~ra~~~gi~vevIpGiSs~~A~-s~~GL~ 64 (164)
..+|+. |||+|| |=...+...+++|++ .|..+|.+ |.-|+.
T Consensus 124 ~~vill--DPmlATG~s~~~ai~~L~~~G~~-----~I~~v~~iaa~~Gi~ 167 (208)
T d1i5ea_ 124 RDFIIV--DPMLATGGSAVAAIDALKKRGAK-----SIKFMCLIAAPEGVK 167 (208)
T ss_dssp SEEEEE--CSEESSSHHHHHHHHHHHHTTCC-----CEEEECSEECHHHHH
T ss_pred CeEEEe--ChhHhcchhHHHHHHHHHhCCCC-----cEEEEEEeecHHHHH
Confidence 355555 999996 334455667888863 44455554 444443
No 32
>d1l0wa2 d.74.4.1 (A:295-414) Prokaryotic AspRS, insert domain {Thermus thermophilus, AspRS-1 [TaxId: 274]}
Probab=27.63 E-value=20 Score=24.30 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=23.2
Q ss_pred hchHHHHHhh--cccCCeEEEecCCCCccccHHHHH
Q 031196 3 EEKADKILSE--SQESNVAFLVVGDPFGATTHTDLV 36 (164)
Q Consensus 3 E~~~~~I~~~--a~~~~VafLt~GDP~~aTTH~~l~ 36 (164)
+++..+|++. ++.+|+.|++.|++..+.+...-+
T Consensus 74 ~~~~~~l~~~~~~~~GD~i~f~ag~~~~~~~~LG~l 109 (120)
T d1l0wa2 74 EPVREALLQATEARPGDTLLFVAGPRKVAATALGAV 109 (120)
T ss_dssp GGGHHHHHHHHCCCTTCEEEEEEESHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHH
Confidence 4445667765 446899999999987765544433
No 33
>d3beda1 c.54.1.1 (A:1-132) PTS system, IIA subunit {Enterococcus faecalis [TaxId: 1351]}
Probab=26.88 E-value=46 Score=22.51 Aligned_cols=52 Identities=21% Similarity=0.211 Sum_probs=28.8
Q ss_pred chHHHHHhhcccCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH
Q 031196 4 EKADKILSESQESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV 58 (164)
Q Consensus 4 ~~~~~I~~~a~~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~ 58 (164)
+..+++++...++.|.++| |=+..|.+......+++++ .+++|-|+.---..
T Consensus 47 ~~l~~~~~~~~~~~vlilt--Dl~GGTP~N~a~~~~~~~~-~v~visG~NLpmlL 98 (132)
T d3beda1 47 AKLAAILKEAGNVPTLVLA--DLKGGTPCNVAMMAMGTYP-QLRVVAGLNLAMAI 98 (132)
T ss_dssp HHHHHHHHHHCSCCEEEEE--SSTTSHHHHHHHHHTTTCT-TEEEEESCCHHHHH
T ss_pred HHHHHHHhhCCCCCEEEEE--ecccCChhHHHHHHHhcCC-CEEEEECCCHHHHH
Confidence 3344555554445565554 7777776555444444432 47788887644444
No 34
>d1umdb2 c.48.1.2 (B:188-324) Branched-chain alpha-keto acid dehydrogenase {Thermus thermophilus [TaxId: 274]}
Probab=26.36 E-value=24 Score=23.66 Aligned_cols=72 Identities=11% Similarity=0.179 Sum_probs=41.6
Q ss_pred cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH--HhhCCcceecCceEEEecCCCCcccCchHHHHHH
Q 031196 15 ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV--GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKR 92 (164)
Q Consensus 15 ~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~--s~~GL~ly~fg~~vtIpf~~~~~~P~s~y~~I~~ 92 (164)
++||++++.| .|+..+ ..-..+.++.|+.+++|.=.|. .-+ ..+--++-+.++.+++ +++|.-.++-..|-.
T Consensus 15 G~dvtiis~G-~~~~~a-l~aa~~L~~~gi~~~vid~~~l-kPlD~~~i~~sv~kt~~vv~v---eE~~~~gg~g~~v~~ 88 (137)
T d1umdb2 15 GKDLTLICYG-TVMPEV-LQAAAELAKAGVSAEVLDLRTL-MPWDYEAVMNSVAKTGRVVLV---SDAPRHASFVSEVAA 88 (137)
T ss_dssp CSSEEEEECG-GGHHHH-HHHHHHHHHTTCCEEEEECCEE-ETCCHHHHHHHHHHHSCEEEE---EEEESTTCHHHHHHH
T ss_pred CCCEEEEEcc-hhhhhh-hhhhhcccccCcceEEEeeccc-CCcchhhhhHHHhccCcEEEE---EcccccchhHHHHHH
Confidence 5899999999 344332 2233445677999999954432 211 1122223345678888 666666666554444
No 35
>d1wu7a1 c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=26.12 E-value=38 Score=21.21 Aligned_cols=42 Identities=14% Similarity=0.148 Sum_probs=31.2
Q ss_pred cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHH
Q 031196 15 ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNA 57 (164)
Q Consensus 15 ~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A 57 (164)
.++|.++.+|+-...- -..+..+.++.|+.|++-++-.++..
T Consensus 3 ~~~V~i~~~g~~~~~~-~~~l~~~Lr~~gi~v~~d~~~~~l~k 44 (97)
T d1wu7a1 3 KKSVYICRVGKINSSI-MNEYSRKLRERGMNVTVEIMERGLSA 44 (97)
T ss_dssp SCEEEEEEESSCCHHH-HHHHHHHHHTTTCEEEECCSCCCHHH
T ss_pred CceEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEECCCCcHHH
Confidence 4789999999854421 24577778888999999877766764
No 36
>d2ozlb2 c.48.1.2 (B:192-329) E1-beta subunit of pyruvate dehydrogenase, C-domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.00 E-value=26 Score=23.77 Aligned_cols=73 Identities=8% Similarity=0.120 Sum_probs=45.3
Q ss_pred cCCeEEEecCCCCccccHHHH--HHHHHhCCCcEEEEcCccHHHH-HHhhCCcceecCceEEEecCCCCcccCchHHHHH
Q 031196 15 ESNVAFLVVGDPFGATTHTDL--VVRAKKLGIQVKAVHNASVMNA-VGICGLQLYRFGETVSIPFFTETWRPGSFYEKIK 91 (164)
Q Consensus 15 ~~~VafLt~GDP~~aTTH~~l--~~ra~~~gi~vevIpGiSs~~A-~s~~GL~ly~fg~~vtIpf~~~~~~P~s~y~~I~ 91 (164)
++|+++++.|- .+|..+ ....++.|+++++|.=.+.-.- ...+--.+-+.++.+++ +++|...++-..+.
T Consensus 13 G~ditiis~G~----~~~~al~aa~~L~~~gi~~~vid~~~lkPld~~~i~~~~~k~~~iivv---ee~~~~gG~gs~i~ 85 (138)
T d2ozlb2 13 GTHITVVSHSR----PVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTV---EGGWPQFGVGAEIC 85 (138)
T ss_dssp CSSEEEEECST----HHHHHHHHHHHHHTTTCCEEEEECCEEETCCHHHHHHHHHHHSCEEEE---CSSCSTTCHHHHHH
T ss_pred CCCEEEEEccH----HHHhHHHHhhhhcccCcceEEEEeccccCCcchhhhhhhccccceEEe---ecccccchHHHHHH
Confidence 58999999993 333333 3445677999999954433110 01111123345688888 88898888887776
Q ss_pred HHH
Q 031196 92 RNR 94 (164)
Q Consensus 92 ~N~ 94 (164)
..+
T Consensus 86 ~~l 88 (138)
T d2ozlb2 86 ARI 88 (138)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 37
>d2b4ya1 c.31.1.5 (A:36-302) NAD-dependent deacetylase sirtuin-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.90 E-value=34 Score=25.48 Aligned_cols=31 Identities=19% Similarity=0.177 Sum_probs=21.3
Q ss_pred EEEecCCCCccccHHHHHHHHHhCCCcEEEE
Q 031196 19 AFLVVGDPFGATTHTDLVVRAKKLGIQVKAV 49 (164)
Q Consensus 19 afLt~GDP~~aTTH~~l~~ra~~~gi~vevI 49 (164)
.||++|-.+.-..-..++..|+++|..+-+|
T Consensus 209 lllviGTSl~V~pa~~l~~~a~~~g~~vv~I 239 (267)
T d2b4ya1 209 LCLVVGTSSVVYPAAMFAPQVAARGVPVAEF 239 (267)
T ss_dssp EEEEESCCSCSTTGGGHHHHHHHTTCCEEEE
T ss_pred eEEEECCCCeecCHHHHHHHHHHcCCcEEEE
Confidence 5677887654444456777888888887666
No 38
>d1ik6a2 c.48.1.2 (A:192-326) E1-beta subunit of pyruvate dehydrogenase, C-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=24.72 E-value=42 Score=22.39 Aligned_cols=69 Identities=14% Similarity=0.276 Sum_probs=44.7
Q ss_pred cCCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcCccHHHHH--HhhCCcceecCceEEEecCCCCcccCchHHHHHH
Q 031196 15 ESNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHNASVMNAV--GICGLQLYRFGETVSIPFFTETWRPGSFYEKIKR 92 (164)
Q Consensus 15 ~~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpGiSs~~A~--s~~GL~ly~fg~~vtIpf~~~~~~P~s~y~~I~~ 92 (164)
++|+++++.|- .+|..+.. |.+.++++++|.=.++ .-+ ..+--.+-+.++.+++ +++|.-.++-..|-.
T Consensus 15 G~dvtIi~~G~----mv~~al~a-a~~l~~~~~vid~~~l-kPlD~~~i~~~~~k~~~vvvv---Ee~~~~gG~gs~i~~ 85 (135)
T d1ik6a2 15 GDDVTLVTYGA----VVHKALEA-AERVKASVEVVDLQTL-NPLDFDTVLKSVSKTGRLIIA---HDSPKTGGLGAEVRA 85 (135)
T ss_dssp CSSEEEEECTT----HHHHHHHH-HHTSSSCEEEEECCEE-ETTCHHHHHHHHHHHCCEEEE---EEEESTTSHHHHHHH
T ss_pred CCcEEEEEecc----chHHHHHH-HHhhccchhhhccccc-cCCChHHHhHHHhccCCcEEE---ecCccccchHHHHHH
Confidence 68999999993 45555533 5666889999855443 222 1222224456789988 778877777766654
No 39
>d1byra_ d.136.1.1 (A:) Nuclease Nuc {Salmonella typhimurium [TaxId: 90371]}
Probab=23.58 E-value=20 Score=23.68 Aligned_cols=37 Identities=24% Similarity=0.346 Sum_probs=22.5
Q ss_pred HHhhcccCCeEEE--ecCCCCccccHHHHHHHHHhCCCcEEEEc
Q 031196 9 ILSESQESNVAFL--VVGDPFGATTHTDLVVRAKKLGIQVKAVH 50 (164)
Q Consensus 9 I~~~a~~~~VafL--t~GDP~~aTTH~~l~~ra~~~gi~vevIp 50 (164)
.+..|+ +.|-+. ...||-+. .-+..|.++|++|+++=
T Consensus 21 ~I~~A~-~~I~I~~~~~~~~~i~----~aL~~a~~rGV~Vril~ 59 (152)
T d1byra_ 21 AIDSAK-TSIRMMAYSFTAPDIM----KALVAAKKRGVDVKIVI 59 (152)
T ss_dssp HHHHCS-SEEEEEESSBCCHHHH----HHHHHHHHTTCEEEEEE
T ss_pred HHHhCC-cEEEEEEEeecCHHHH----HHHHHHHhcCCeEEEEE
Confidence 445565 334433 44565443 24566778899999994
No 40
>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]}
Probab=23.11 E-value=35 Score=23.20 Aligned_cols=48 Identities=19% Similarity=0.215 Sum_probs=30.5
Q ss_pred hHHHHHhhcccCCe-EEEecCCCCccc------------------------------cHHHHHHHHHhCCCcEEEEcCc
Q 031196 5 KADKILSESQESNV-AFLVVGDPFGAT------------------------------THTDLVVRAKKLGIQVKAVHNA 52 (164)
Q Consensus 5 ~~~~I~~~a~~~~V-afLt~GDP~~aT------------------------------TH~~l~~ra~~~gi~vevIpGi 52 (164)
..+++++.+.++++ +++..||=.=.. +...+..+.++.++++-.|||=
T Consensus 17 ~l~~l~~~~~~~~~D~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~~~~~~~L~~~~~pv~~i~GN 95 (257)
T d2yvta1 17 LLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFREIGELGVKTFVVPGK 95 (257)
T ss_dssp GHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCT
T ss_pred HHHHHHHHHhhcCCCEEEEecccCCCCCCCHHHHHHHHhhhhhceeeeccccccchhhHHHHHHHHHhcCCcEEEEeCC
Confidence 34666766665444 345679954322 2233555677889999999993
No 41
>d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]}
Probab=22.83 E-value=35 Score=23.55 Aligned_cols=47 Identities=11% Similarity=0.173 Sum_probs=27.1
Q ss_pred HHhhcccCCeEEE-ecCCCCc------cc---cHHHHHHHHHhCCCcEEEEcCccHH
Q 031196 9 ILSESQESNVAFL-VVGDPFG------AT---THTDLVVRAKKLGIQVKAVHNASVM 55 (164)
Q Consensus 9 I~~~a~~~~VafL-t~GDP~~------aT---TH~~l~~ra~~~gi~vevIpGiSs~ 55 (164)
.++.++..++.|+ ..||=.= .. ..-.+.....+.++++-.++|=--.
T Consensus 41 ~v~~i~~~~~DfVv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~GNHD~ 97 (320)
T d2nxfa1 41 AVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEF 97 (320)
T ss_dssp HHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHHTTCSEEEECCCHHHH
T ss_pred HHHHHhhCCCCEEEECCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCEEEecccCcc
Confidence 4444556777776 5599321 11 1223344455668999999995443
No 42
>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.81 E-value=36 Score=26.18 Aligned_cols=43 Identities=16% Similarity=0.124 Sum_probs=34.1
Q ss_pred cccCCeEEEecC------C--CCcc-------ccHHHHHHHHHhCCCcEEEEcCccHH
Q 031196 13 SQESNVAFLVVG------D--PFGA-------TTHTDLVVRAKKLGIQVKAVHNASVM 55 (164)
Q Consensus 13 a~~~~VafLt~G------D--P~~a-------TTH~~l~~ra~~~gi~vevIpGiSs~ 55 (164)
+.++.++++|.| | |--+ .+=..|...|..+|.+|-.|+|..++
T Consensus 15 ~~g~k~VLITaG~T~epID~~pVR~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~~s~ 72 (290)
T d1p9oa_ 15 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSA 72 (290)
T ss_dssp HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSC
T ss_pred ccCCcEEEEccCCcCcccCCCCceEeCCCCchHHHHHHHHHHHHcCCEEEEEecCCcc
Confidence 346789999998 8 8766 23356888899999999999988664
No 43
>d1zpda1 c.31.1.3 (A:188-362) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]}
Probab=22.48 E-value=79 Score=21.58 Aligned_cols=49 Identities=22% Similarity=0.152 Sum_probs=38.4
Q ss_pred hchHHHHHhhccc-CCeEEEecCCCCccccHHHHHHHHHhCCCcEEEEcC
Q 031196 3 EEKADKILSESQE-SNVAFLVVGDPFGATTHTDLVVRAKKLGIQVKAVHN 51 (164)
Q Consensus 3 E~~~~~I~~~a~~-~~VafLt~GDP~~aTTH~~l~~ra~~~gi~vevIpG 51 (164)
|...+++++...+ +..++++.|.--.+-.+-.+..-|.+.|+.|-+-+.
T Consensus 9 ~~~v~~~~~~l~~AkrPvIi~G~g~~~~~a~~~l~~lae~~~~Pv~tt~~ 58 (175)
T d1zpda1 9 NAAVDETLKFIANRDKVAVLVGSKLRAAGAEEAAVKFTDALGGAVATMAA 58 (175)
T ss_dssp HHHHHHHHHHHTTCSCEEEEECTTTTTTTCHHHHHHHHHHHCCCEEEEGG
T ss_pred HHHHHHHHHHHHcCCCEEEEECcCccccchHHHHHHHHHhhceeEEeccc
Confidence 4455667766664 899999999888787888888889999999986553
No 44
>d1p3y1_ c.34.1.1 (1:) MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}
Probab=22.24 E-value=38 Score=24.47 Aligned_cols=41 Identities=7% Similarity=0.126 Sum_probs=28.5
Q ss_pred hcccCCeEEEecCCCCccccH-HHHHHHHHhCCCcEEEEcCccH
Q 031196 12 ESQESNVAFLVVGDPFGATTH-TDLVVRAKKLGIQVKAVHNASV 54 (164)
Q Consensus 12 ~a~~~~VafLt~GDP~~aTTH-~~l~~ra~~~gi~vevIpGiSs 54 (164)
.+++|+|.+.+-|= +++-. .+++.+.++.|.+|++|---|.
T Consensus 3 ~l~~KkIllgvTGs--iaa~k~~~l~~~L~~~g~eV~vv~T~~A 44 (183)
T d1p3y1_ 3 ILKDKKLLIGICGS--ISSVGISSYLLYFKSFFKEIRVVMTKTA 44 (183)
T ss_dssp TGGGCEEEEEECSC--GGGGGTHHHHHHHTTTSSEEEEEECHHH
T ss_pred CcCCCEEEEEEeCH--HHHHHHHHHHHHHHHCCCeEEEEEEcch
Confidence 35678999999994 43222 3566777888999999854443
No 45
>d1ygya2 c.23.12.1 (A:3-98,A:283-316) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=21.45 E-value=28 Score=23.27 Aligned_cols=51 Identities=18% Similarity=0.241 Sum_probs=30.8
Q ss_pred HHHHhhcccCCeEEEecCCCCcc------------------ccHHHHHHHHHhCCCcEEEEcCccHHHHH
Q 031196 7 DKILSESQESNVAFLVVGDPFGA------------------TTHTDLVVRAKKLGIQVKAVHNASVMNAV 58 (164)
Q Consensus 7 ~~I~~~a~~~~VafLt~GDP~~a------------------TTH~~l~~ra~~~gi~vevIpGiSs~~A~ 58 (164)
+++++.+++-++.++..++|+-. +-|.|+ ..|+++||.|--.||.++-+.+
T Consensus 34 ~el~~~~~~~d~ii~~~~~~i~~~~l~~~p~Lk~I~~~g~G~d~IDl-~~~~~~gI~V~n~p~~~~~~VA 102 (130)
T d1ygya2 34 DKLLAAVPEADALLVRSATTVDAEVLAAAPKLKIVARAGVGLDNVDV-DAATARGVLVVNAPTSASTAEA 102 (130)
T ss_dssp HHHHHHGGGCSEEEECSSSCBCHHHHHTCTTCCEEEESSSCCTTBCH-HHHHHTTCEEECCTTSSCBHHH
T ss_pred HHHHHHcCCCEEEEEcCcccchHHHHhhcccceEEeeecccccchhH-HHHHHCCceEEecCCCCcHHHH
Confidence 56777777777666555655432 122222 3367778888888877766544
No 46
>d1gsaa1 c.30.1.3 (A:1-122) Prokaryotic glutathione synthetase, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=20.44 E-value=57 Score=21.75 Aligned_cols=58 Identities=14% Similarity=0.237 Sum_probs=35.9
Q ss_pred EEecCCCCcc-----ccHHHHHHHHHhCCCcEEEEcCccHHHHHHhhCCcceecCceEEEecCCCCc
Q 031196 20 FLVVGDPFGA-----TTHTDLVVRAKKLGIQVKAVHNASVMNAVGICGLQLYRFGETVSIPFFTETW 81 (164)
Q Consensus 20 fLt~GDP~~a-----TTH~~l~~ra~~~gi~vevIpGiSs~~A~s~~GL~ly~fg~~vtIpf~~~~~ 81 (164)
++.+-||.=. .|=..|..+|.++|++|-... ...++. .+=.++-..+.+++.-....|
T Consensus 4 I~FimDpie~l~~~kDTT~~Lm~eAq~Rg~~v~~~~-~~dL~~---~~~~v~a~~~~v~~~~~~~~~ 66 (122)
T d1gsaa1 4 LGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYME-MGDLYL---INGEARAHTRTLNVKQNYEEW 66 (122)
T ss_dssp EEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEEC-GGGEEE---ETTEEEEEEEEEEECSCSSCC
T ss_pred EEEEeCCHHHCCCCCChHHHHHHHHHHCCCeEEEEe-cCceEE---eCCcEEEEEeeccccccCccc
Confidence 3445677654 444789999999999998874 333332 233455566677775433344
No 47
>d1qs0b1 c.36.1.7 (B:2-205) 2-oxoisovalerate dehydrogenase (E1B), Pyr module {Pseudomonas putida [TaxId: 303]}
Probab=20.24 E-value=94 Score=22.55 Aligned_cols=129 Identities=19% Similarity=0.124 Sum_probs=75.1
Q ss_pred HHHHHhhcc-cCCeEEE--ecCCCCc-cccHHHHHHHH-HhCCCcEEEEcCccHHHHH-HhhCCcceecCceEEEecCCC
Q 031196 6 ADKILSESQ-ESNVAFL--VVGDPFG-ATTHTDLVVRA-KKLGIQVKAVHNASVMNAV-GICGLQLYRFGETVSIPFFTE 79 (164)
Q Consensus 6 ~~~I~~~a~-~~~VafL--t~GDP~~-aTTH~~l~~ra-~~~gi~vevIpGiSs~~A~-s~~GL~ly~fg~~vtIpf~~~ 79 (164)
.+.+.+.++ +++|.++ -+||+-. +.|-..|..+- .++=++ -++|--+.+ ...|+.+.-+--.+.++|..-
T Consensus 12 ~~al~e~m~~d~~v~~~Gedv~~~Gg~f~~t~gl~~kfgp~Rv~d----tpIaE~~~vG~A~GlA~~G~rPvve~~~~df 87 (204)
T d1qs0b1 12 RSAMDVMLERDDNVVVYGQDVGYFGGVFRCTEGLQTKYGKSRVFD----APISESGIVGTAVGMGAYGLRPVVEIQFADY 87 (204)
T ss_dssp HHHHHHHHHHCTTEEEEETTCSSSCCTTSTTTTHHHHHCTTTEEE----CCSCHHHHHHHHHHHHHHTCEEEEECSCGGG
T ss_pred HHHHHHHHhhCCCEEEEecCCCccCCccccchHHHHHHhhhheec----ccccceeehhHHHHHhcCCCcEEEEEEecch
Confidence 344555555 5788777 4578743 33334454443 332222 367766666 567777765555555666554
Q ss_pred CcccCchHHHHHHHHh------cCCc--cEEEE-ecc-------cCCchhhhhhc---CCccCCCCCCCCHHHHHHHHHH
Q 031196 80 TWRPGSFYEKIKRNRS------LGLH--TLCLL-DIR-------VKEPSLESLCR---GKKLYEPPRYMTVNIAIEQLLE 140 (164)
Q Consensus 80 ~~~P~s~y~~I~~N~~------~glH--TlvLL-Di~-------~~e~~~e~~~~---g~~~~~~~r~Mt~~~A~~~Lle 140 (164)
.++. +|.|..++. .|-+ .+++. -.. -|.++.+.+++ |.+++.|. ++.||...|..
T Consensus 88 ~~~a---~dqi~n~~ak~~~~~~~~~~~p~vir~~~g~~~~~g~~Hs~~~~s~~~~iPgl~Vv~Ps---~~~da~~ll~~ 161 (204)
T d1qs0b1 88 FYPA---SDQIVSEMARLRYRSAGEFIAPLTLRMPCGGGIYGGQTHSQSPEAMFTQVCGLRTVMPS---NPYDAKGLLIA 161 (204)
T ss_dssp CGGG---HHHHHTTTTTHHHHTTTSSCCCCEEEEEECCSSSCCSSSSCCCHHHHTTSTTCEEECCC---SHHHHHHHHHH
T ss_pred hhHH---HHHHHHHHHHhhcccccCcccceEEEcCcccccCcccccccCHHHHHhcCCCcEEEeeC---CHHHHHHHHHH
Confidence 4444 888877663 1111 23332 222 25567888876 77887775 88899988888
Q ss_pred HHHH
Q 031196 141 VELL 144 (164)
Q Consensus 141 ~e~~ 144 (164)
.-+.
T Consensus 162 a~~~ 165 (204)
T d1qs0b1 162 SIEC 165 (204)
T ss_dssp HHHS
T ss_pred HHhC
Confidence 7554
No 48
>d1pd3a_ a.30.3.1 (A:) Nonstructural protein ns2, Nep, M1-binding domain {Influenza A virus [TaxId: 11320]}
Probab=20.16 E-value=30 Score=20.67 Aligned_cols=16 Identities=44% Similarity=0.428 Sum_probs=13.4
Q ss_pred CCHHHHHHHHHHHHHH
Q 031196 129 MTVNIAIEQLLEVELL 144 (164)
Q Consensus 129 Mt~~~A~~~Lle~e~~ 144 (164)
.|.-||+.+|||+|.+
T Consensus 35 itfmqalqllleveqe 50 (54)
T d1pd3a_ 35 ITFMQALQLLLEVEQE 50 (54)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5566999999999875
No 49
>d2jfga2 c.59.1.1 (A:298-437) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=20.11 E-value=31 Score=23.52 Aligned_cols=28 Identities=11% Similarity=0.057 Sum_probs=20.8
Q ss_pred hhchHHHHHhhcccCCeEEEecCCCCcc
Q 031196 2 VEEKADKILSESQESNVAFLVVGDPFGA 29 (164)
Q Consensus 2 vE~~~~~I~~~a~~~~VafLt~GDP~~a 29 (164)
+|+....+.+.++..++++|.||.|.+-
T Consensus 93 l~~av~~a~~~~~~g~~VLlSPa~aSfD 120 (140)
T d2jfga2 93 MEQAMRLLAPRVQPGDMVLLSPACASLD 120 (140)
T ss_dssp HHHHHHHHGGGCCTTCEEEECCSSBSTT
T ss_pred HHHHHHHHHHhcccCCEEEECCCccchh
Confidence 3555566667777789999999988763
Done!