BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031197
(164 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9P281|BAHC1_HUMAN BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens
GN=BAHCC1 PE=1 SV=3
Length = 2608
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 21 KVVRPGDCVLMRPADSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAK 80
+ +R GDC + A PY+ R+E + +N+ V+V+W+Y PEE+ G+RQ G
Sbjct: 2482 ETLRVGDCAVFLSAGRPNLPYIGRIESMWESWGSNMVVKVKWFYHPEETKLGKRQCDGKN 2541
Query: 81 ELFLSDHYDVQSAHTIEGKCTVHTFKNYTKL-ENVGAED----YFCRFEYKAATGGF-TP 134
L+ S H D TI KC V + Y ++ + +D Y+ Y TG T
Sbjct: 2542 ALYQSCHEDENDVQTISHKCQVVAREQYEQMARSRKCQDRQDLYYLAGTYDPTTGRLVTA 2601
Query: 135 DRVAVYC 141
D V + C
Sbjct: 2602 DGVPILC 2608
>sp|Q3UHR0|BAHC1_MOUSE BAH and coiled-coil domain-containing protein 1 OS=Mus musculus
GN=Bahcc1 PE=2 SV=2
Length = 2643
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 21 KVVRPGDCVLMRPADSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAK 80
+ +R GDC + A PY+ R+E + +N+ V+V+W+Y PEE+ G+RQ G
Sbjct: 2517 ETLRIGDCAVFLSAGRPNLPYIGRIESLWESWGSNMVVKVKWFYHPEETKLGKRQSDGKN 2576
Query: 81 ELFLSDHYDVQSAHTIEGKCTVHTFKNYTKL----ENVGAED-YFCRFEYKAATGGF-TP 134
L+ S H D TI KC V + Y ++ + +D Y+ Y TG T
Sbjct: 2577 ALYQSCHEDENDVQTISHKCQVVGREQYEQMMRGRKYQDQQDLYYLAGTYDPTTGRLVTA 2636
Query: 135 DRVAVYC 141
D V V C
Sbjct: 2637 DGVPVLC 2643
>sp|Q90941|PB1_CHICK Protein polybromo-1 OS=Gallus gallus GN=PBRM1 PE=1 SV=1
Length = 1633
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 20 NKVVRPGDCVLMRPADSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGA 79
N + GD V + PA+++ P++ +E++ D + W+YRP E+ +
Sbjct: 953 NSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLE 1012
Query: 80 KELFLSDHYDVQSAHTIEGKCTVHTFKNYTKL--ENVGAED-YFCRFEYKAATGGF 132
KE+F SD+Y+ I GKC V K Y KL EN ED Y C Y A T F
Sbjct: 1013 KEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVYVCESRYSAKTKSF 1068
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 12/91 (13%)
Query: 23 VRPGDCVLMRPADSDKPPYVARVEKIEADHRNNVKVRVRWYY-----RPEESIGGRRQFH 77
++ GDCV ++ +P V R+EK+ V+ +++ PEE+ +
Sbjct: 1157 LKVGDCVFIKSHGLVRP-RVGRIEKMW------VRDGAAYFFGPIFIHPEETEHEPTKMF 1209
Query: 78 GAKELFLSDHYDVQSAHTIEGKCTVHTFKNY 108
KE+FLS+ + I GKC V +FK++
Sbjct: 1210 YKKEVFLSNLEETCPMSCILGKCAVLSFKDF 1240
>sp|Q8BSQ9|PB1_MOUSE Protein polybromo-1 OS=Mus musculus GN=Pbrm1 PE=1 SV=4
Length = 1634
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 20 NKVVRPGDCVLMRPADSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGA 79
N + GD V + PA+++ P++ +E++ D + W+YRP E+ +
Sbjct: 955 NSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLE 1014
Query: 80 KELFLSDHYDVQSAHTIEGKCTVHTFKNYTKL--ENVGAEDYF-CRFEYKAATGGF 132
KE+F SD+Y+ I GKC V K Y KL EN ED F C Y A T F
Sbjct: 1015 KEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSF 1070
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 12/91 (13%)
Query: 23 VRPGDCVLMRPADSDKPPYVARVEKIEADHRNNVKVRVRWYY-----RPEESIGGRRQFH 77
++ GDCV ++ +P V R+EK+ V+ ++Y PEE+ +
Sbjct: 1158 LKVGDCVFIKSHGLVRP-RVGRIEKVW------VRDGAAYFYGPIFIHPEETEHEPTKMF 1210
Query: 78 GAKELFLSDHYDVQSAHTIEGKCTVHTFKNY 108
KE+FLS+ + I GKC V +FK++
Sbjct: 1211 YKKEVFLSNLEETCPMSCILGKCAVLSFKDF 1241
>sp|Q86U86|PB1_HUMAN Protein polybromo-1 OS=Homo sapiens GN=PBRM1 PE=1 SV=1
Length = 1689
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 20 NKVVRPGDCVLMRPADSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGA 79
N + GD V + PA+++ P++ +E++ D + W+YRP E+ +
Sbjct: 955 NSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLE 1014
Query: 80 KELFLSDHYDVQSAHTIEGKCTVHTFKNYTKL--ENVGAEDYF-CRFEYKAATGGF 132
KE+F SD+Y+ I GKC V K Y KL EN ED F C Y A T F
Sbjct: 1015 KEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSF 1070
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 12/91 (13%)
Query: 23 VRPGDCVLMRPADSDKPPYVARVEKIEADHRNNVKVRVRWYY-----RPEESIGGRRQFH 77
++ GDCV ++ +P V R+EK+ V+ ++Y PEE+ +
Sbjct: 1158 LKVGDCVFIKSHGLVRP-RVGRIEKVW------VRDGAAYFYGPIFIHPEETEHEPTKMF 1210
Query: 78 GAKELFLSDHYDVQSAHTIEGKCTVHTFKNY 108
KE+FLS+ + I GKC V +FK++
Sbjct: 1211 YKKEVFLSNLEETCPMTCILGKCAVLSFKDF 1241
>sp|O15417|TNC18_HUMAN Trinucleotide repeat-containing gene 18 protein OS=Homo sapiens
GN=TNRC18 PE=1 SV=3
Length = 2968
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 33/153 (21%)
Query: 21 KVVRPGDCVLMRPADSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGA- 79
+++R GDC + A PY+ R++ + NN+ VRV+W+Y PEE+ G +QFH
Sbjct: 2817 EMIRIGDCAVFLSAGRPNLPYIGRIQSMWESWGNNMVVRVKWFYHPEETSPG-KQFHQGQ 2875
Query: 80 -------------------------KELFLSDHYDVQSAHTIEGKCTVHTFKNYTK-LEN 113
+ L+ S H D T+ KC V + Y + L+
Sbjct: 2876 HWDQKSSRSLPAALRVSSQRKDFMERALYQSSHVDENDVQTVSHKCLVVGLEQYEQMLKT 2935
Query: 114 VGAED----YFCRFEYKAATGG-FTPDRVAVYC 141
+D Y+ Y+ TG F+ D V V C
Sbjct: 2936 KKYQDSEGLYYLAGTYEPTTGMIFSTDGVPVLC 2968
>sp|Q80WC3|TNC18_MOUSE Trinucleotide repeat-containing gene 18 protein OS=Mus musculus
GN=Tnrc18 PE=1 SV=2
Length = 2878
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 33/153 (21%)
Query: 21 KVVRPGDCVLMRPADSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGA- 79
+++R GDC + A PY+ R++ + NN+ VRV+W+Y PEE+ G +QFH
Sbjct: 2727 EMIRIGDCAVFLSAGRPNLPYIGRIQSMWESWGNNMVVRVKWFYHPEETSPG-KQFHEGQ 2785
Query: 80 -------------------------KELFLSDHYDVQSAHTIEGKCTVHTFKNYTK-LEN 113
+ L+ S H D T+ KC V + Y + L+
Sbjct: 2786 HWDQKSGHSLPAALRASSQRKDFMERALYQSSHVDENDVQTVSHKCLVVGLEQYEQMLKT 2845
Query: 114 VGAED----YFCRFEYKAATGG-FTPDRVAVYC 141
+D Y+ Y+ TG F+ D V V C
Sbjct: 2846 KKYQDSEGLYYLAGTYEPTTGMIFSTDGVPVLC 2878
>sp|Q3LHL9|WGE_DROME Protein winged eye OS=Drosophila melanogaster GN=wge PE=1 SV=1
Length = 1658
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 16 IKGTNKVVRPGDCVLMRPADSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIG-GRR 74
IK + + GD + PY+ R+E + N VRV W+Y PEE+ G +
Sbjct: 1505 IKRGKETITVGDSAVFLSTGRPDRPYIGRIESMWETTTGNKVVRVAWFYHPEETTGCPKL 1564
Query: 75 QFHGAKELFLSDHYDVQSAHTIEGKCTVHTFKNYTKLENVGAE 117
+F GA LF S H D TI +C V F +Y E GA+
Sbjct: 1565 KFPGA--LFESPHEDENDVQTISHRCEVLQFGSY--FEKFGAD 1603
>sp|Q8TBE0|BAHD1_HUMAN Bromo adjacent homology domain-containing 1 protein OS=Homo sapiens
GN=BAHD1 PE=1 SV=2
Length = 780
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 21 KVVRPGDCVLMRPAD-SDKPPYVARVEKI-EADHRNNVKVRVRWYYRPEESIGGRR-QFH 77
+ +R D VL++ PYVA++ + E + + + WYYRPE GGR H
Sbjct: 624 ETIRVRDTVLLKSGPRKTSTPYVAKISALWENPESGELMMSLLWYYRPEHLQGGRSPSMH 683
Query: 78 GA--KELFLSDHYDVQSAHTIEGKCTVHTFKNYTKL 111
E+F S H D S IE KC V TF Y +
Sbjct: 684 EPLQNEVFASRHQDQNSVACIEEKCYVLTFAEYCRF 719
>sp|Q497V6|BAHD1_MOUSE Bromo adjacent homology domain-containing 1 protein OS=Mus musculus
GN=Bahd1 PE=2 SV=1
Length = 772
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 21 KVVRPGDCVLMRPAD-SDKPPYVARVEKI-EADHRNNVKVRVRWYYRPEESIGGRR-QFH 77
+ +R D VL++ PYVA++ + E + + + WYYRPE GGR H
Sbjct: 616 ETIRVRDTVLLKSGPRKTSTPYVAKISALWENPESGELMMSLLWYYRPEHLQGGRSPSMH 675
Query: 78 GA--KELFLSDHYDVQSAHTIEGKCTVHTFKNYTKL 111
E+F S H D S IE KC V TF Y +
Sbjct: 676 EPLQNEVFASRHQDQNSVACIEEKCYVLTFAEYCRF 711
>sp|P53236|RSC1_YEAST Chromatin structure-remodeling complex subunit RSC1
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RSC1 PE=1 SV=1
Length = 928
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 57/142 (40%), Gaps = 3/142 (2%)
Query: 26 GDCVLMRPADSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLS 85
GD VL+ + P V ++ ++ + N + WY+RPE+++ + E+ +
Sbjct: 373 GDWVLLHNPNDINKPIVGQIFRLWSTTDGNKWLNACWYFRPEQTVHRVDRLFYKNEVMKT 432
Query: 86 DHYDVQSAHTIEGKCTVHTFKNYTKLE---NVGAEDYFCRFEYKAATGGFTPDRVAVYCK 142
Y I+GKC V F + + + V + C F Y + F R C
Sbjct: 433 GQYRDHPIQDIKGKCYVIHFTRFQRGDPSTKVNGPQFVCEFRYNESDKVFNKIRTWKACL 492
Query: 143 CEMPYNPDDLMVQCEGCKDWIY 164
E + D+ + G K + Y
Sbjct: 493 PEELRDQDEPTIPVNGRKFFKY 514
>sp|Q10077|SNT2_SCHPO Lid2 complex component snt2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=snt2 PE=4 SV=1
Length = 1131
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 19/122 (15%)
Query: 21 KVVRPGDCVLMRPADSDKPPYVARVEKIEADH---RNNV--KVRVRWYYRPEESIGGRRQ 75
++++P D VL+ +P +AR+ E N+ VR+ WY+RP + +R
Sbjct: 103 ELIQPNDFVLVNSPFPGEPFQIARIISFEKSRPCVSTNLYDSVRLNWYFRPRDI---QRH 159
Query: 76 FHGAKELFLSDHYDVQSAHTIEGKCTVHTFKNYTKLENVGAEDYFCRFEYKAATGGFTPD 135
+ LF S H D+ + +++ KCTV K+ +++EN+ EYK+ + D
Sbjct: 160 LTDTRLLFASMHSDIYNIGSVQEKCTV---KHRSQIENLD--------EYKSQAKSYYFD 208
Query: 136 RV 137
R+
Sbjct: 209 RL 210
>sp|O74964|RSC1_SCHPO Chromatin structure-remodeling complex subunit rsc1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rsc1 PE=1 SV=1
Length = 803
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 7/123 (5%)
Query: 15 NIKGTNKVVRPGDCVLMR-PADSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGR 73
+I GT ++ GD VL+R PADS KP V+++ +I + V V WY RPE+++
Sbjct: 347 SIDGT--LLNVGDWVLIRNPADSSKP-IVSQIYRIWKSDDDINYVTVCWYLRPEQTVHRA 403
Query: 74 RQFHGAKELFLSDHYDVQSAHTIEGKCTVHTFKNYTKLENVGAED---YFCRFEYKAATG 130
E+F + Y I G+C V Y + G + C Y T
Sbjct: 404 DAVFYENEVFKTSLYRDHPVSEIVGRCFVMYITRYIRGRPKGIRSTPVFVCESRYNDDTK 463
Query: 131 GFT 133
F+
Sbjct: 464 QFS 466
>sp|E6ZGB4|PHF2_DICLA Lysine-specific demethylase phf2 OS=Dicentrarchus labrax GN=phf2
PE=3 SV=1
Length = 1081
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 137 VAVYCKCEMPYNPDDLMVQCEGCKDWIY 164
V VYC C +PY+ M++C+ CKDW +
Sbjct: 4 VPVYCICRLPYDVTQFMIECDACKDWFH 31
>sp|Q6P949|PHF2_DANRE Lysine-specific demethylase phf2 OS=Danio rerio GN=phf2 PE=2 SV=3
Length = 1063
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 137 VAVYCKCEMPYNPDDLMVQCEGCKDWIY 164
V VYC C +PY+ M++C+ CKDW +
Sbjct: 4 VPVYCICRLPYDVTQFMIECDACKDWFH 31
>sp|O75151|PHF2_HUMAN Lysine-specific demethylase PHF2 OS=Homo sapiens GN=PHF2 PE=1 SV=4
Length = 1096
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 137 VAVYCKCEMPYNPDDLMVQCEGCKDWIY 164
V VYC C +PY+ M++C+ CKDW +
Sbjct: 4 VPVYCVCRLPYDVTRFMIECDACKDWFH 31
>sp|Q9WTU0|PHF2_MOUSE Lysine-specific demethylase PHF2 OS=Mus musculus GN=Phf2 PE=1 SV=2
Length = 1096
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 137 VAVYCKCEMPYNPDDLMVQCEGCKDWIY 164
V VYC C +PY+ M++C+ CKDW +
Sbjct: 4 VPVYCVCRLPYDVTRFMIECDACKDWFH 31
>sp|Q06488|RSC2_YEAST Chromatin structure-remodeling complex subunit RSC2
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RSC2 PE=1 SV=1
Length = 889
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 55/146 (37%), Gaps = 11/146 (7%)
Query: 26 GDCVLMRPADSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLS 85
GD L+R + + P V ++ ++ + WYYRPE+++ + E+ +
Sbjct: 413 GDWALLRNQNDPQKPIVGQIFRLWKTPDGKQWLNACWYYRPEQTVHRVDRLFYKNEVMKT 472
Query: 86 DHYDVQSAHTIEGKCTVHTFKNYTKLENVGAED-------YFCRFEYKAATGGFTPDRVA 138
Y + GKC V F Y + G D + C F Y + F R
Sbjct: 473 GQYRDHLVSNLVGKCYVIHFTRYQR----GNPDMKLEGPLFVCEFRYNESDKIFNKIRTW 528
Query: 139 VYCKCEMPYNPDDLMVQCEGCKDWIY 164
C E + D+ + G K + Y
Sbjct: 529 KACLPEEIRDLDEATIPVNGRKFFKY 554
>sp|Q80TJ7|PHF8_MOUSE Histone lysine demethylase PHF8 OS=Mus musculus GN=Phf8 PE=1 SV=2
Length = 1023
Score = 39.3 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 137 VAVYCKCEMPYNPDDLMVQCEGCKDWIY 164
V VYC C +PY+ M++C+ C+DW +
Sbjct: 4 VPVYCLCRLPYDVTRFMIECDMCQDWFH 31
>sp|Q9UPP1|PHF8_HUMAN Histone lysine demethylase PHF8 OS=Homo sapiens GN=PHF8 PE=1 SV=3
Length = 1060
Score = 39.3 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 137 VAVYCKCEMPYNPDDLMVQCEGCKDWIY 164
V VYC C +PY+ M++C+ C+DW +
Sbjct: 40 VPVYCLCRLPYDVTRFMIECDMCQDWFH 67
>sp|P0CH95|PHF8_DANRE Histone lysine demethylase PHF8 OS=Danio rerio GN=phf8 PE=1 SV=1
Length = 1032
Score = 39.3 bits (90), Expect = 0.012, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 137 VAVYCKCEMPYNPDDLMVQCEGCKDWIY 164
V VYC C +PY+ M++C+ C+DW +
Sbjct: 4 VPVYCLCRLPYDVTRFMIECDVCQDWFH 31
>sp|Q27746|DNMT1_PARLI DNA (cytosine-5)-methyltransferase PliMCI OS=Paracentrotus lividus
GN=DNMT PE=2 SV=1
Length = 1612
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 23 VRPGDCVLMRPADSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKEL 82
+ GDCVL+ P D KP ++ARV + + + + +W+ E++ G + E+
Sbjct: 745 IEIGDCVLIHPDDPTKPLFMARVIYMWQESQGEMMFHAQWFVYGSETVLG--ETSDPLEV 802
Query: 83 FLSDHYDVQSAHTIEGKCTV 102
F D ++ KCTV
Sbjct: 803 FPIDECQDTYLGSVNAKCTV 822
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 54 NNVKVRVRWYYRPEESIGGRRQFHGA--KELFLSDHYDVQSAHTIEGKCTV 102
+ V++RV YRPE++ GR + A L+ S+ V ++GKC+V
Sbjct: 1001 STVRLRVNKMYRPEDTHKGRTAAYQADLNVLYWSEEEAVTELEVVQGKCSV 1051
>sp|Q3UWM4|KDM7_MOUSE Lysine-specific demethylase 7 OS=Mus musculus GN=Jhdm1d PE=2 SV=2
Length = 940
Score = 38.9 bits (89), Expect = 0.015, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 139 VYCKCEMPYNPDDLMVQCEGCKDWIY 164
VYC C PY+ + M++C+ CKDW +
Sbjct: 38 VYCVCRQPYDVNRFMIECDVCKDWFH 63
>sp|Q6ZMT4|KDM7_HUMAN Lysine-specific demethylase 7 OS=Homo sapiens GN=JHDM1D PE=1 SV=2
Length = 941
Score = 38.5 bits (88), Expect = 0.017, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 139 VYCKCEMPYNPDDLMVQCEGCKDWIY 164
VYC C PY+ + M++C+ CKDW +
Sbjct: 38 VYCVCRQPYDVNRFMIECDICKDWFH 63
>sp|Q24K09|DNMT1_BOVIN DNA (cytosine-5)-methyltransferase 1 OS=Bos taurus GN=DNMT1 PE=2
SV=1
Length = 1611
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 26 GDCVLMRPADSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLS 85
GDCV + P DS KP Y+ARV + D N W+ +++ G ELFL
Sbjct: 757 GDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDTVLG--ATSDPLELFLV 814
Query: 86 DHYDVQSAHTIEGKCTV 102
D + I K V
Sbjct: 815 DECEDMQLSYIHSKVQV 831
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 26/117 (22%)
Query: 13 SYNIKGTNKVVRP-----------------GDCVLMRPADSDKPPYVARVEKIEADHRNN 55
++NIK ++ V RP D + D+ +P + R+++I ++N
Sbjct: 944 TFNIKLSSPVKRPRKEPVDEALYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEIFCSKKSN 1003
Query: 56 -------VKVRVRWYYRPEESIGGRRQFHGA--KELFLSDHYDVQSAHTIEGKCTVH 103
+K+RV +YRPE + + A L+ SD V ++G+CTV
Sbjct: 1004 GRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQGRCTVE 1060
>sp|P26358|DNMT1_HUMAN DNA (cytosine-5)-methyltransferase 1 OS=Homo sapiens GN=DNMT1 PE=1
SV=2
Length = 1616
Score = 38.5 bits (88), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 26 GDCVLMRPADSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLS 85
GDCV + P DS KP Y+ARV + D N W+ +++ G ELFL
Sbjct: 760 GDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDTVLG--ATSDPLELFLV 817
Query: 86 DHYDVQSAHTIEGKCTV 102
D + I K V
Sbjct: 818 DECEDMQLSYIHSKVKV 834
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 26/117 (22%)
Query: 13 SYNIKGTNKVVRP-----------------GDCVLMRPADSDKPPYVARVEKIEADHRNN 55
++NIK ++ V RP D + D+ +P + R+++I ++N
Sbjct: 947 TFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEIFCPKKSN 1006
Query: 56 -------VKVRVRWYYRPEESIGGRRQFHGA--KELFLSDHYDVQSAHTIEGKCTVH 103
+K+RV +YRPE + + A L+ SD V ++G+CTV
Sbjct: 1007 GRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQGRCTVE 1063
>sp|Q8ILC2|TGTL_PLAF7 Queuine tRNA-ribosyltransferase-like protein OS=Plasmodium
falciparum (isolate 3D7) GN=PF14_0322 PE=3 SV=1
Length = 407
Score = 37.4 bits (85), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 36/91 (39%), Gaps = 9/91 (9%)
Query: 76 FHGAKELFLSDHYDVQSAHTIEGKCTVHTFKNYTKLENVGAEDY------FCRFEYKAAT 129
F KE F S+ + S H + C Y + NV +DY F +Y +T
Sbjct: 61 FEKVKEYFSSNKTNEVSGHYLHEFCDFQDSYRYLNIRNVLVDDYNINVHKFISLKYDNST 120
Query: 130 GGFTPDRVAVYCKCEMPYNPDDLMVQCEGCK 160
F+ D Y KC + PD + CE K
Sbjct: 121 AVFSIDD---YIKCLKIFEPDIFCIPCEEIK 148
>sp|Q08D35|KDM7_XENTR Lysine-specific demethylase 7 OS=Xenopus tropicalis GN=jhdm1d PE=2
SV=1
Length = 922
Score = 36.6 bits (83), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 139 VYCKCEMPYNPDDLMVQCEGCKDWIY 164
VYC C PY+ M++C+ CKDW +
Sbjct: 7 VYCVCRQPYDVSRFMIECDICKDWFH 32
>sp|Q5RHD1|KDM7A_DANRE Lysine-specific demethylase 7A OS=Danio rerio GN=jhdm1da PE=2 SV=2
Length = 875
Score = 36.2 bits (82), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 139 VYCKCEMPYNPDDLMVQCEGCKDWIY 164
+YC C PY+ + M++C+ CKDW +
Sbjct: 6 LYCVCRQPYDVNRFMIECDICKDWFH 31
>sp|B1Q3J6|DNM1B_ORYSJ DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica
GN=MET1B PE=2 SV=1
Length = 1529
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 52 HRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCTVHTFKNYTK- 110
H + K+ VR +YRP++ + +E++ S++ IEGKC V + +
Sbjct: 963 HPASTKISVRRFYRPDDISSAKAYVSDIREVYYSENIVKVPVDMIEGKCEVKKKIDISNS 1022
Query: 111 -LENVGAEDYFCRFEYKAATGGF 132
+ + ++FC Y ATG
Sbjct: 1023 DVPVMVEHEFFCEHFYDPATGAL 1045
>sp|P0CF52|KDM7B_DANRE Lysine-specific demethylase 7B OS=Danio rerio GN=jhdm1db PE=2 SV=1
Length = 577
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 139 VYCKCEMPYNPDDLMVQCEGCKDWIY 164
+YC C PY+ M++C+ CKDW +
Sbjct: 6 LYCVCRQPYDVSRFMIECDICKDWFH 31
>sp|P13864|DNMT1_MOUSE DNA (cytosine-5)-methyltransferase 1 OS=Mus musculus GN=Dnmt1 PE=1
SV=5
Length = 1620
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 26 GDCVLMRPADSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFL 84
GDCV + P DS KP Y+ARV + D + W+ +++ G ELFL
Sbjct: 763 GDCVSVIPDDSSKPLYLARVTALWEDKNGQMMFHAHWFCAGTDTVLGATS--DPLELFL 819
Score = 30.8 bits (68), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 22/115 (19%)
Query: 35 DSDKPPYVARVEKIEADHRN------NVKVRVRWYYRPEESIGGRRQFHGA-----KELF 83
D+ +P + R+++I + ++K+R+ +YRPE + R ++G+ L+
Sbjct: 990 DAPEPYRIGRIKEIHCGKKKGKVNEADIKLRLYKFYRPENT---HRSYNGSYHTDINMLY 1046
Query: 84 LSDHYDVQSAHTIEGKCTVHTFKNYTKLENV-----GAEDYFCRFE-YKAATGGF 132
SD V + ++G+CTV ++ LE++ G D F E Y + T F
Sbjct: 1047 WSDEEAVVNFSDVQGRCTVEYGEDL--LESIQDYSQGGPDRFYFLEAYNSKTKNF 1099
>sp|Q92072|DNMT1_CHICK DNA (cytosine-5)-methyltransferase 1 OS=Gallus gallus GN=DNMT1 PE=1
SV=1
Length = 1537
Score = 35.0 bits (79), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Query: 20 NKVVRPGDCVLMRPADSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGA 79
++ + GDCV + P D KP Y+ARV + D + W+ +++ G
Sbjct: 666 SETLEVGDCVSVSPDDPTKPLYLARVTAMWEDSSGQM-FHAHWFCPGSDTVLG--ATSDP 722
Query: 80 KELFLSDHYDVQSAHTIEGKCTV 102
ELFL D + I GK V
Sbjct: 723 LELFLVDECEDMQLSYIHGKVNV 745
>sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila
melanogaster GN=E(bx) PE=1 SV=2
Length = 2669
Score = 34.3 bits (77), Expect = 0.35, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 139 VYCKCEMPYNPDDLMVQCEGCKDWIY 164
+YC C PY+ + C+ C+DW +
Sbjct: 2496 LYCSCRQPYDESQFYICCDKCQDWFH 2521
Score = 30.8 bits (68), Expect = 4.3, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 132 FTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWIY 164
T + +YC C PY+ V C+ C +W +
Sbjct: 2433 LTRKKEKLYCICRTPYDDTKFYVGCDLCSNWFH 2465
>sp|Q6BER5|NU301_CAEEL Nucleosome-remodeling factor subunit NURF301-like OS=Caenorhabditis
elegans GN=nurf-1 PE=1 SV=2
Length = 2194
Score = 33.1 bits (74), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 135 DRVAVYCKCEMPYNPDDLMVQCEGCKDWIY 164
D+ A+YC C+ PY+ V C+ C+ W +
Sbjct: 1956 DQPALYCVCQKPYDDTKFYVGCDSCQGWFH 1985
>sp|Q924K8|MTA3_MOUSE Metastasis-associated protein MTA3 OS=Mus musculus GN=Mta3 PE=1
SV=1
Length = 591
Score = 32.7 bits (73), Expect = 1.00, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 28/106 (26%)
Query: 24 RPGDCVLMRPADSDKPPYVARVEKIEADHRNNVKVRVRWYYR------------------ 65
R GD V + S+ P + R+E++ NV+ +V +YR
Sbjct: 7 RVGDYVYFENSSSN-PYLIRRIEELNKTASGNVEAKVVCFYRRRDISNTLIMLADKHAKE 65
Query: 66 -------PEESIGGRRQFHGAK--ELFLSDHYDVQSAHTIEGKCTV 102
P E+ +Q H K ELFLS Y+ A I GKC+V
Sbjct: 66 TEEESETPVEADLTEKQKHQLKHRELFLSRQYESLPATHIRGKCSV 111
>sp|Q69Z38|PEAK1_MOUSE Pseudopodium-enriched atypical kinase 1 OS=Mus musculus GN=Peak1
PE=1 SV=4
Length = 1735
Score = 32.7 bits (73), Expect = 1.1, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 19 TNKVVRPGDC--------VLMRPADSDKPPYVARVEKIEADHRNNVKVRVRWYYRP 66
T V +PG+C + P DS+K P K A+H NN +VR +RP
Sbjct: 8 TEHVWKPGECKNCFKPKSLHQLPPDSEKTPITHGSGKTNANHSNNHRVRSTGNFRP 63
>sp|Q62901|RERE_RAT Arginine-glutamic acid dipeptide repeats protein OS=Rattus
norvegicus GN=Rere PE=2 SV=2
Length = 1559
Score = 32.0 bits (71), Expect = 1.7, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 49/130 (37%), Gaps = 35/130 (26%)
Query: 25 PGDCVLMRPADSDKPPYVARVEKIE-ADHRNNVKVRVRWYYRPEES--------IGGRRQ 75
P C L P S P +++ + R+++ + V+WYYR E + R
Sbjct: 149 PPACSL--PVASQPPQHLSEAGRGPVGSKRDHLLMNVKWYYRQSEVPDSVYQHLVQDRHN 206
Query: 76 FHGA-------------KELFLSDHYDVQSAHTIEGKCTVHTFKNYTKLENVGAEDYFCR 122
+ + +ELF+SD+ D A + GKC + F D F
Sbjct: 207 ENDSGRELVITDPVIKNRELFISDYVDTYHAAALRGKCNISHF-----------SDIFAA 255
Query: 123 FEYKAATGGF 132
E+KA F
Sbjct: 256 REFKARVDSF 265
>sp|Q9P2R6|RERE_HUMAN Arginine-glutamic acid dipeptide repeats protein OS=Homo sapiens
GN=RERE PE=1 SV=2
Length = 1566
Score = 32.0 bits (71), Expect = 1.8, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 51/136 (37%), Gaps = 35/136 (25%)
Query: 19 TNKVVRPGDCVLMRPADSDKPPYVARVEKIE-ADHRNNVKVRVRWYYRPEES-------- 69
T + P C L P S P +++ + R+++ + V+WYYR E
Sbjct: 144 TPALCDPPACSL--PVASQPPQHLSEAGRGPVGSKRDHLLMNVKWYYRQSEVPDSVYQHL 201
Query: 70 IGGRRQFHGA-------------KELFLSDHYDVQSAHTIEGKCTVHTFKNYTKLENVGA 116
+ R + + +ELF+SD+ D A + GKC + F
Sbjct: 202 VQDRHNENDSGRELVITDPVIKNRELFISDYVDTYHAAALRGKCNISHF----------- 250
Query: 117 EDYFCRFEYKAATGGF 132
D F E+KA F
Sbjct: 251 SDIFAAREFKARVDSF 266
>sp|O94247|HCS1_SCHPO DNA polymerase alpha-associated DNA helicase A
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=hcs1 PE=3 SV=1
Length = 660
Score = 31.6 bits (70), Expect = 2.3, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 18 GTNKVVRPGDCVLMRPADSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESI 70
G NKV+ GD + + P K PY++ E++ + VK + YR E I
Sbjct: 405 GMNKVILAGDHMQLSPNVQSKRPYISMFERLVKSQGDLVKCFLNIQYRMHELI 457
>sp|P34881|DNMT1_ARATH DNA (cytosine-5)-methyltransferase 1 OS=Arabidopsis thaliana GN=DMT1
PE=1 SV=1
Length = 1534
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 58 VRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCTVHTFKNYTKLENVGAE 117
V+VR +YRPE+ + +EL+ S V +EGKC V +
Sbjct: 969 VKVRRFYRPEDVSAEKAYASDIQELYFSQDTVVLPPGALEGKCEVRKKSDMPLSREYPIS 1028
Query: 118 D--YFCRFEYKAATGGF 132
D +FC + + G
Sbjct: 1029 DHIFFCDLFFDTSKGSL 1045
>sp|Q7Y1I7|DNM1A_ORYSJ DNA (cytosine-5)-methyltransferase 1A OS=Oryza sativa subsp. japonica
GN=MET1A PE=2 SV=1
Length = 1527
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 55 NVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCTVHTFKNY--TKLE 112
+ KV+VR +YRP++ + +E++ S+ IEGKC V + + L
Sbjct: 966 STKVKVRRFYRPDDISSTKAYSSDIREVYYSEDIISVPVVMIEGKCEVRLKDDLPNSDLP 1025
Query: 113 NVGAEDYFCRFEYKAATGGF 132
V + C + Y A G
Sbjct: 1026 AVVEHVFCCEYLYDPANGAL 1045
>sp|Q6PDK2|MLL2_MOUSE Histone-lysine N-methyltransferase MLL2 OS=Mus musculus GN=Mll2 PE=1
SV=2
Length = 5588
Score = 31.6 bits (70), Expect = 2.6, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 143 CEMPYNPDDLMVQCEGCKDWIY 164
C PY +DL++QC C+ W++
Sbjct: 1466 CHAPYVEEDLLIQCRHCERWMH 1487
>sp|O14686|MLL2_HUMAN Histone-lysine N-methyltransferase MLL2 OS=Homo sapiens GN=MLL2 PE=1
SV=2
Length = 5537
Score = 31.6 bits (70), Expect = 2.6, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 143 CEMPYNPDDLMVQCEGCKDWIY 164
C PY +DL++QC C+ W++
Sbjct: 1510 CHAPYVEEDLLIQCRHCERWMH 1531
>sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF
PE=1 SV=3
Length = 3046
Score = 31.6 bits (70), Expect = 2.7, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 127 AATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWIY 164
+ T T +YC C+ PY+ + C+ C++W +
Sbjct: 2856 STTSKETKKDTKLYCICKTPYDESKFYIGCDRCQNWYH 2893
>sp|Q54DV0|UBR7_DICDI Putative E3 ubiquitin-protein ligase ubr7 OS=Dictyostelium
discoideum GN=ubr7 PE=3 SV=2
Length = 465
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 140 YCKCEMPYNPDDLMVQCEGCKDWIY 164
YC C+ PY+ + M+QC C+DW +
Sbjct: 239 YCYCDSPYDYKEDMIQCIFCEDWFH 263
>sp|Q9CHF2|ACCD_LACLA Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta
OS=Lactococcus lactis subsp. lactis (strain IL1403)
GN=accD PE=3 SV=1
Length = 288
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 134 PDRVAVYCKCEMPYNPDDLMVQCEGCKDWIY 164
P+R + + E P PD+L +C CK IY
Sbjct: 14 PNRSIIEKQAEQPEVPDELFAKCPACKHTIY 44
>sp|A2RM23|ACCD_LACLM Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta
OS=Lactococcus lactis subsp. cremoris (strain MG1363)
GN=accD PE=3 SV=1
Length = 288
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 134 PDRVAVYCKCEMPYNPDDLMVQCEGCKDWIY 164
P+R + + E P PD+L +C CK IY
Sbjct: 14 PNRSIIEKQAEQPEVPDELFAKCPACKHTIY 44
>sp|Q80TZ9|RERE_MOUSE Arginine-glutamic acid dipeptide repeats protein OS=Mus musculus
GN=Rere PE=1 SV=3
Length = 1558
Score = 31.2 bits (69), Expect = 2.9, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 32/101 (31%)
Query: 53 RNNVKVRVRWYYRPEES--------IGGRRQFHGA-------------KELFLSDHYDVQ 91
R+++ + V+WYYR E + R + + +ELF+SD+ D
Sbjct: 177 RDHLLMNVKWYYRQSEVPDSVYQHLVQDRHNENDSGRELVITDPVIKNRELFISDYVDTY 236
Query: 92 SAHTIEGKCTVHTFKNYTKLENVGAEDYFCRFEYKAATGGF 132
A + GKC + F D F E+KA F
Sbjct: 237 HAAALRGKCNISHF-----------SDIFAAREFKARVDSF 266
>sp|Q94F88|CMT3_ARATH DNA (cytosine-5)-methyltransferase CMT3 OS=Arabidopsis thaliana
GN=CMT3 PE=1 SV=2
Length = 839
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 9/95 (9%)
Query: 38 KPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFH---GAKELFLSDHYDVQSAH 94
K P++ ++ ++ + RW+YRP +++ ++F K +F S+ D
Sbjct: 124 KDPFICKIIEMFEGANGKLYFTARWFYRPSDTV--MKEFEILIKKKRVFFSEIQDTNELG 181
Query: 95 TIEGKCTVHTFK-NYTKLENVGAE---DYFCRFEY 125
+E K + N E + A D+FC Y
Sbjct: 182 LLEKKLNILMIPLNENTKETIPATENCDFFCDMNY 216
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,964,719
Number of Sequences: 539616
Number of extensions: 2831819
Number of successful extensions: 4787
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 4703
Number of HSP's gapped (non-prelim): 92
length of query: 164
length of database: 191,569,459
effective HSP length: 108
effective length of query: 56
effective length of database: 133,290,931
effective search space: 7464292136
effective search space used: 7464292136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)