BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031199
(164 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VWB|A Chain A, Structure Of The Archaeal Kae1-Bud32 Fusion Protein
Mj1130: A Model For The Eukaryotic Ekc-Keops Subcomplex
Involved In Transcription And Telomere Homeostasis.
pdb|2VWB|B Chain B, Structure Of The Archaeal Kae1-Bud32 Fusion Protein
Mj1130: A Model For The Eukaryotic Ekc-Keops Subcomplex
Involved In Transcription And Telomere Homeostasis
Length = 535
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 14 LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
LI +GAEA + +++ ++KER K YR LD I R EAR + + G+
Sbjct: 338 LIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIP 397
Query: 74 TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
P ++ VD + Y+ G KD ++E+ L DIA +IG + KLH +
Sbjct: 398 APYIFDVDLDNKRIMMSYINGKLAKD---------VIEDNL-DIAYKIGEIVGKLHKNDV 447
Query: 134 IHGDLTTSNML 144
IH DLTTSN +
Sbjct: 448 IHNDLTTSNFI 458
>pdb|3ENH|A Chain A, Crystal Structure Of Cgi121BUD32KAE1 COMPLEX
pdb|3ENH|B Chain B, Crystal Structure Of Cgi121BUD32KAE1 COMPLEX
pdb|3EN9|A Chain A, Structure Of The Methanococcus Jannaschii Kae1-Bud32
Fusion Protein
pdb|3EN9|B Chain B, Structure Of The Methanococcus Jannaschii Kae1-Bud32
Fusion Protein
Length = 540
Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 14 LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
LI +GAEA + +++ ++KER K YR LD I R EAR + + G+
Sbjct: 343 LIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIP 402
Query: 74 TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
P ++ VD + Y+ G KD ++E+ L DIA +IG + KLH +
Sbjct: 403 APYIFDVDLDNKRIMMSYINGKLAKD---------VIEDNL-DIAYKIGEIVGKLHKNDV 452
Query: 134 IHGDLTTSNML 144
IH DLTTSN +
Sbjct: 453 IHNDLTTSNFI 463
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTS 141
P + +L E V G + D +E G + E D QI A+A LH+ G++H DL
Sbjct: 120 PTEISLVLELVTGGELFDRIVEKGYYS--ERDAADAVKQILEAVAYLHENGIVHRDLKPE 177
Query: 142 NML 144
N+L
Sbjct: 178 NLL 180
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 21/145 (14%)
Query: 1 MEITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKI-TLKRLNA 59
ME+ + + L+KQ ++F +C+ K S +R SL+++I LK++
Sbjct: 14 MEVLGSGAFSEVFLVKQRLTGKLF-----ALKCIKK---SPAFRDSSLENEIAVLKKIKH 65
Query: 60 EARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIAL 119
E + + ST Y L + V G + D LE G++ E+ +
Sbjct: 66 EN--IVTLEDIYESTTHYY--------LVMQLVSGGELFDRILERGVY--TEKDASLVIQ 113
Query: 120 QIGNAIAKLHDGGLIHGDLTTSNML 144
Q+ +A+ LH+ G++H DL N+L
Sbjct: 114 QVLSAVKYLHENGIVHRDLKPENLL 138
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
+ E++EG ++ DI ++ EEQ+ + L + A++ LH+ G+IH D+ + ++L+
Sbjct: 119 VVMEFLEGGALTDIVTHTRMN---EEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT 175
Query: 147 S 147
S
Sbjct: 176 S 176
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 7/125 (5%)
Query: 25 ESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ 84
E T + + +K F P + + TLKR E ++ + + + +
Sbjct: 31 EDTILNIKVAIKAIFI-----PPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDC 85
Query: 85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNML 144
+ L EY+EGP++ + G + + + QI + I HD ++H D+ N+L
Sbjct: 86 YYLVMEYIEGPTLSEYIESHGPLSV--DTAINFTNQILDGIKHAHDMRIVHRDIKPQNIL 143
Query: 145 IRSGK 149
I S K
Sbjct: 144 IDSNK 148
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 21/123 (17%)
Query: 33 CVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVL-----YAVDPVQHTL 87
C+ + SKK S+D + L+ + A A LG + V+ +A D H L
Sbjct: 37 CIYAIKRSKKPLAGSVDEQNALREVYAHAV-------LGQHSHVVRYFSAWAED--DHML 87
Query: 88 -TFEYVEGPSVKDIFLEFGLHGIM----EEQLEDIALQIGNAIAKLHDGGLIHGDLTTSN 142
EY G S+ D E + IM E +L+D+ LQ+G + +H L+H D+ SN
Sbjct: 88 IQNEYCNGGSLADAISEN--YRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSN 145
Query: 143 MLI 145
+ I
Sbjct: 146 IFI 148
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 21/123 (17%)
Query: 33 CVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVL-----YAVDPVQHTL 87
C+ + SKK S+D + L+ + A A LG + V+ +A D H L
Sbjct: 35 CIYAIKRSKKPLAGSVDEQNALREVYAHAV-------LGQHSHVVRYFSAWAED--DHML 85
Query: 88 -TFEYVEGPSVKDIFLEFGLHGIM----EEQLEDIALQIGNAIAKLHDGGLIHGDLTTSN 142
EY G S+ D E + IM E +L+D+ LQ+G + +H L+H D+ SN
Sbjct: 86 IQNEYCNGGSLADAISEN--YRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSN 143
Query: 143 MLI 145
+ I
Sbjct: 144 IFI 146
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 90 EYVEGPSVKDIFLEFGLHGIM----EEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
EY G S+ D E + IM E +L+D+ LQ+G + +H L+H D+ SN+ I
Sbjct: 89 EYCNGGSLADAISEN--YRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 90 EYVEGPSVKDIFLEFGLHGIM----EEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
EY G S+ D E + IM E +L+D+ LQ+G + +H L+H D+ SN+ I
Sbjct: 87 EYCNGGSLADAISEN--YRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 144
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
+ E++EG ++ DI ++ EEQ+ + L + A++ LH G+IH D+ + ++L+
Sbjct: 225 VVMEFLEGGALTDIVTHTRMN---EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL 280
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
+ E++EG ++ DI ++ EEQ+ + L + A++ LH G+IH D+ + ++L+
Sbjct: 105 VVMEFLEGGALTDIVTHTRMN---EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL 160
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
+ E++EG ++ DI ++ EEQ+ + L + A++ LH G+IH D+ + ++L+
Sbjct: 103 VVMEFLEGGALTDIVTHTRMN---EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL 158
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 33.9 bits (76), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
+ E++EG ++ DI ++ EEQ+ + L + A++ LH G+IH D+ + ++L+
Sbjct: 94 VVMEFLEGGALTDIVTHTRMN---EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL 149
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 33.9 bits (76), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
+ E++EG ++ DI ++ EEQ+ + L + A++ LH G+IH D+ + ++L+
Sbjct: 98 VVMEFLEGGALTDIVTHTRMN---EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL 153
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 33.9 bits (76), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 87 LTFEYVEGPSVKDIFLEF-GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
L EY EG ++ +F G+ E + + I +A+ LH+ +IH DL N+++
Sbjct: 96 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 155
Query: 146 RSG 148
+ G
Sbjct: 156 QPG 158
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 33.9 bits (76), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
+ E++EG ++ DI ++ EEQ+ + L + A++ LH G+IH D+ + ++L+
Sbjct: 148 VVMEFLEGGALTDIVTHTRMN---EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL 203
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 33.9 bits (76), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 56 RLNAEARCMTKARRLGVSTPVLYAVDPVQHT-LTFEYVEGPSVKDIFLEFGLHGIMEEQL 114
R+ AE +C+T A V Y H + Y+E S DI L+ + +++
Sbjct: 65 RIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDI-----LNSLSFQEV 119
Query: 115 EDIALQIGNAIAKLHDGGLIHGDLTTSNML 144
+ L + A+ ++H G++H D+ SN L
Sbjct: 120 REYMLNLFKALKRIHQFGIVHRDVKPSNFL 149
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 33.9 bits (76), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 87 LTFEYVEGPSVKDIFLEF-GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
L EY EG ++ +F G+ E + + I +A+ LH+ +IH DL N+++
Sbjct: 95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 154
Query: 146 RSG 148
+ G
Sbjct: 155 QPG 157
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 33.9 bits (76), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
EY++G +++ I +++ A I + +A LH +IH DL + N L+R K
Sbjct: 87 EYIKGGTLRGIIKSMDSQYPWSQRVS-FAKDIASGMAYLHSMNIIHRDLNSHNCLVRENK 145
Query: 150 N 150
N
Sbjct: 146 N 146
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 33.5 bits (75), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 72 VSTPVLYAVDPVQHT-----LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIA 126
+ P + A+D + + L + V G + D +E G + E + Q+ +A+
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFY--TERDASRLIFQVLDAVK 130
Query: 127 KLHDGGLIHGDLTTSNMLIRS 147
LHD G++H DL N+L S
Sbjct: 131 YLHDLGIVHRDLKPENLLYYS 151
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 33.5 bits (75), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 72 VSTPVLYAVDPVQHT-----LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIA 126
+ P + A+D + + L + V G + D +E G + E + Q+ +A+
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFY--TERDASRLIFQVLDAVK 130
Query: 127 KLHDGGLIHGDLTTSNMLIRS 147
LHD G++H DL N+L S
Sbjct: 131 YLHDLGIVHRDLKPENLLYYS 151
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 33.1 bits (74), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 89 FEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
E+++G ++ DI + L+ EEQ+ + + A+A LH G+IH D+ + ++L+
Sbjct: 121 MEFLQGGALTDIVSQVRLN---EEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL 174
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 33.1 bits (74), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 72 VSTPVLYAVDPVQHT-----LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIA 126
+ P + A+D + + L + V G + D +E G + E + Q+ +A+
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFY--TERDASRLIFQVLDAVK 130
Query: 127 KLHDGGLIHGDLTTSNMLIRS 147
LHD G++H DL N+L S
Sbjct: 131 YLHDLGIVHRDLKPENLLYYS 151
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 33.1 bits (74), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
+ E+ G +V I LE G+ E Q++ + Q+ A+ LH +IH DL N+L+
Sbjct: 93 IMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLM 150
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 33.1 bits (74), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 101 FLEFGLHGIMEEQL------EDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
++E LH ++ + + + Q+ I LH GGL+H D+ SN+L+ +
Sbjct: 92 YMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNA 144
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 32.7 bits (73), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 72 VSTPVLYAVDPVQHT-----LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIA 126
+ P + A+D + + L + V G + D +E G + E + Q+ +A+
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFY--TERDASRLIFQVLDAVK 130
Query: 127 KLHDGGLIHGDLTTSNMLIRS 147
LHD G++H DL N+L S
Sbjct: 131 YLHDLGIVHRDLKPENLLYYS 151
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 32.7 bits (73), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
+ E+ G +V + LE + E Q++ + Q +A+ LHD +IH DL N+L
Sbjct: 84 ILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILF 141
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 32.7 bits (73), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
+ E+ G +V I LE G+ E Q++ + Q+ A+ LH +IH DL N+L+
Sbjct: 85 IMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLM 142
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
+ E+ G +V + LE + E Q++ + Q +A+ LHD +IH DL N+L
Sbjct: 111 ILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILF 168
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
+ E+ G +V + LE + E Q++ + Q +A+ LHD +IH DL N+L
Sbjct: 111 ILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILF 168
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
+ E+ G +V + LE + E Q++ + Q +A+ LHD +IH DL N+L
Sbjct: 111 ILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILF 168
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 54 LKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQ 113
L+ E + K R + + + Y+ P Q + ++ EG S L LH I+E +
Sbjct: 75 LQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSS-----LYHHLH-IIETK 127
Query: 114 LE-----DIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
E DIA Q + LH +IH DL ++N+ +
Sbjct: 128 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL 164
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 54 LKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQ 113
L+ E + K R + + + Y+ P Q + ++ EG S L LH I+E +
Sbjct: 68 LQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSS-----LYHHLH-IIETK 120
Query: 114 LE-----DIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
E DIA Q + LH +IH DL ++N+ +
Sbjct: 121 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL 157
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 54 LKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQ 113
L+ E + K R + + + Y+ P Q + ++ EG S L LH I+E +
Sbjct: 76 LQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSS-----LYHHLH-IIETK 128
Query: 114 LE-----DIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
E DIA Q + LH +IH DL ++N+ +
Sbjct: 129 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL 165
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 54 LKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQ 113
L+ E + K R + + + Y+ P Q + ++ EG S L LH I+E +
Sbjct: 76 LQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSS-----LYHHLH-IIETK 128
Query: 114 LE-----DIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
E DIA Q + LH +IH DL ++N+ +
Sbjct: 129 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL 165
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 54 LKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQ 113
L+ E + K R + + + Y+ P Q + ++ EG S L LH I+E +
Sbjct: 53 LQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSS-----LYHHLH-IIETK 105
Query: 114 LE-----DIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
E DIA Q + LH +IH DL ++N+ +
Sbjct: 106 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL 142
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 54 LKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQ 113
L+ E + K R + + + Y+ P Q + ++ EG S L LH I+E +
Sbjct: 50 LQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSS-----LYHHLH-IIETK 102
Query: 114 LE-----DIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
E DIA Q + LH +IH DL ++N+ +
Sbjct: 103 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL 139
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 54 LKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQ 113
L+ E + K R + + + Y+ P Q + ++ EG S L LH I+E +
Sbjct: 48 LQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSS-----LYHHLH-IIETK 100
Query: 114 LE-----DIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
E DIA Q + LH +IH DL ++N+ +
Sbjct: 101 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL 137
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 117 IALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
I LQI A+ LH GL+H DL SN+
Sbjct: 123 IFLQIAEAVEFLHSKGLMHRDLKPSNIFF 151
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 54 LKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQ 113
L+ E + K R + + + Y+ P Q + ++ EG S L LH I+E +
Sbjct: 53 LQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSS-----LYHHLH-IIETK 105
Query: 114 LE-----DIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
E DIA Q + LH +IH DL ++N+ +
Sbjct: 106 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL 142
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSN 142
++ TL FE+V+ ++ + G+ E ++D+ Q + LH ++H DL N
Sbjct: 92 IKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPEN 150
Query: 143 MLIRSG 148
+L+ SG
Sbjct: 151 ILVTSG 156
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 54 LKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQ 113
L+ E + K R + + + Y+ P Q + ++ EG S L LH I+E +
Sbjct: 48 LQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSS-----LYHHLH-IIETK 100
Query: 114 LE-----DIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
E DIA Q + LH +IH DL ++N+ +
Sbjct: 101 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL 137
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSN 142
++ TL FE+V+ ++ + G+ E ++D+ Q + LH ++H DL N
Sbjct: 84 IKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPEN 142
Query: 143 MLIRSG 148
+L+ SG
Sbjct: 143 ILVTSG 148
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSN 142
++ TL FE+V+ ++ + G+ E ++D+ Q + LH ++H DL N
Sbjct: 84 IKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPEN 142
Query: 143 MLIRSG 148
+L+ SG
Sbjct: 143 ILVTSG 148
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSN 142
++ TL FE+V+ ++ + G+ E ++D+ Q + LH ++H DL N
Sbjct: 84 IKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPEN 142
Query: 143 MLIRSG 148
+L+ SG
Sbjct: 143 ILVTSG 148
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 9/58 (15%)
Query: 88 TFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
TF++++ + +L + +H Q+ +A Q+ A+ LHD L H DL N+L
Sbjct: 122 TFDFLKDNN----YLPYPIH-----QVRHMAFQLCQAVKFLHDNKLTHTDLKPENILF 170
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 126 ERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS 161
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 126 ERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS 161
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 119 ERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS 154
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 54 LKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQ 113
L+ E + K R + + + Y+ P Q + ++ EG S L LH I+E +
Sbjct: 48 LQAFKNEVGVLRKTRHVNILLFMGYSTAP-QLAIVTQWCEGSS-----LYHHLH-IIETK 100
Query: 114 LE-----DIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
E DIA Q + LH +IH DL ++N+ +
Sbjct: 101 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL 137
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 86 TLTFEYVEGPSVKDI--FLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNM 143
TL FE++E KD+ L+ G+ + Q++ Q+ +A H ++H DL N+
Sbjct: 95 TLVFEFME----KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNL 150
Query: 144 LIRS 147
LI S
Sbjct: 151 LINS 154
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 31.2 bits (69), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 86 TLTFEYVEGPSVKDI--FLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNM 143
TL FE++E KD+ L+ G+ + Q++ Q+ +A H ++H DL N+
Sbjct: 95 TLVFEFME----KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNL 150
Query: 144 LIRS 147
LI S
Sbjct: 151 LINS 154
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 164 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 119 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 154
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 120 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 155
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 127 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 162
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 125 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 160
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 117 IALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
I +QI A+ LH GL+H DL SN+
Sbjct: 169 IFIQIAEAVEFLHSKGLMHRDLKPSNIFF 197
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 131 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 166
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 120 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 155
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 120 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 155
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 30.8 bits (68), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 30.8 bits (68), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 127 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 162
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 164 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
L FE+V+ + D LE +G+ + ++ QI N I H +IH D+ N+L+
Sbjct: 101 LVFEFVDHTILDD--LELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILV 157
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 127 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 162
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 128 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 163
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Query: 53 TLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTL--TFEYVEGPSVKDIFLEFGLHGIM 110
+L++L E R M + L+ V + TL EY G V D + HG M
Sbjct: 49 SLQKLFREVRIMKVLNHPNIVK--LFEVIETEKTLYLVMEYASGGEVFDYLVA---HGWM 103
Query: 111 EEQLEDIAL-QIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
+E+ QI +A+ H ++H DL N+L+ + N
Sbjct: 104 KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN 144
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 124 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 159
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 30.8 bits (68), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 126 ERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS 161
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 126 ERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS 161
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
E++ + Q+ I LH G+IH DL SN++++S
Sbjct: 126 ERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS 161
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 16/138 (11%)
Query: 14 LIKQGAEARVFESTFVGRRCVVKERFSKKYRH-PSLDSKITLKRLNAEARCMTKARRLGV 72
+I G +V+ + ++G VK RH P D T++ + EA+ + +
Sbjct: 14 IIGIGGFGKVYRAFWIGDEVAVKAA-----RHDPDEDISQTIENVRQEAKLFAMLKHPNI 68
Query: 73 STPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHG--IMEEQLEDIALQIGNAIAKLHD 130
+ L E+ G + + L G I + L + A+QI + LHD
Sbjct: 69 IALRGVCLKEPNLCLVMEFARGGPLNRV-----LSGKRIPPDILVNWAVQIARGMNYLHD 123
Query: 131 GGL---IHGDLTTSNMLI 145
+ IH DL +SN+LI
Sbjct: 124 EAIVPIIHRDLKSSNILI 141
>pdb|1TQI|A Chain A, Crystal Structure Of A. Fulgidus Rio2 Serine Protein
Kinase
pdb|1TQM|A Chain A, Crystal Structure Of A. Fulgidus Rio2 Serine Protein
Kinase Bound To Amppnp
pdb|1ZAO|A Chain A, Crystal Structure Of A.Fulgidus Rio2 Kinase Complexed With
Atp And Manganese Ions
pdb|1ZAR|A Chain A, Crystal Structure Of A.Fulgidus Rio2 Kinase Complexed With
Adp And Manganese Ions
Length = 282
Score = 30.4 bits (67), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 46/96 (47%), Gaps = 13/96 (13%)
Query: 50 SKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGI 109
S + ++ E R + K + G++ P +YA + + + E ++ L+ +
Sbjct: 144 SVLAIRSARNEFRALQKLQ--GLAVPKVYAWEG--NAVLMELIDAKE---------LYRV 190
Query: 110 MEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
E +++ I +AK + G++HGDL+ N+L+
Sbjct: 191 RVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLV 226
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 30.4 bits (67), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 113 QLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG 148
QL DIA Q + LH +IH D+ ++N+ + G
Sbjct: 133 QLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEG 168
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 30.4 bits (67), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 30/141 (21%)
Query: 6 NSEDGSLILIKQGAEARVFESTFVGRRCVVKE-RFSKKYRHPSLDSKITLKRLNAEARCM 64
N + G ++ IK+ E+ E V ++ ++E R K+ +HP+L + + + R
Sbjct: 24 NRDTGQIVAIKKFLES---EDDPVIKKIALREIRMLKQLKHPNLVNLLEVFR-------- 72
Query: 65 TKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNA 124
+ RRL L FEY + + + L+ G+ E ++ I Q A
Sbjct: 73 -RKRRLH---------------LVFEYCDHTVLHE--LDRYQRGVPEHLVKSITWQTLQA 114
Query: 125 IAKLHDGGLIHGDLTTSNMLI 145
+ H IH D+ N+LI
Sbjct: 115 VNFCHKHNCIHRDVKPENILI 135
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
L EYV S++D H I QL A QI +A LH IH DL N+L+
Sbjct: 112 LVMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL 167
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 30.4 bits (67), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTS 141
P L + V G + D +E G + E+ + Q+ +A+ LH G++H DL
Sbjct: 92 PNHLYLVMQLVSGGELFDRIVEKGFY--TEKDASTLIRQVLDAVYYLHRMGIVHRDLKPE 149
Query: 142 NMLIRS 147
N+L S
Sbjct: 150 NLLYYS 155
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 30.4 bits (67), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 32/140 (22%)
Query: 19 AEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY 78
+A + +ST GR+ V+KE I + R++++ R ++RR +
Sbjct: 38 GKAILVKSTEDGRQYVIKE--------------INISRMSSKER--EESRREVAVLANMK 81
Query: 79 AVDPVQHTLTFE----------YVEGPSVKDIFLEFGLH-GIM--EEQLEDIALQIGNAI 125
+ VQ+ +FE Y EG D+F G++ E+Q+ D +QI A+
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEG---GDLFKRINAQKGVLFQEDQILDWFVQICLAL 138
Query: 126 AKLHDGGLIHGDLTTSNMLI 145
+HD ++H D+ + N+ +
Sbjct: 139 KHVHDRKILHRDIKSQNIFL 158
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 30.0 bits (66), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
+ EY E ++ D+ L+ +E + QI A++ +H G+IH DL N+ I
Sbjct: 92 IQMEYCENRTLYDLIHSENLNQQRDEYWR-LFRQILEALSYIHSQGIIHRDLKPMNIFID 150
Query: 147 SGKN 150
+N
Sbjct: 151 ESRN 154
>pdb|1TQP|A Chain A, Crystal Structure Of A. Fulgidus Rio2 Serine Protein
Kinase Bound To Atp
Length = 282
Score = 30.0 bits (66), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 46/96 (47%), Gaps = 13/96 (13%)
Query: 50 SKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGI 109
S + ++ E R + K + G++ P +YA + + + E ++ L+ +
Sbjct: 144 SVLAIRSARNEFRALQKLQ--GLAVPKVYAWEG--NAVLXELIDAKE---------LYRV 190
Query: 110 MEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
E +++ I +AK + G++HGDL+ N+L+
Sbjct: 191 RVENPDEVLDXILEEVAKFYHRGIVHGDLSQYNVLV 226
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 30.0 bits (66), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 60 EARCMTKARRLGVSTPVLYAV---DPVQHTLTFEYVEGPSVKDIFL--EFGLHGIMEEQL 114
EA+ M K R + LYAV +P+ + EY+ S+ D FL E G + + QL
Sbjct: 63 EAQVMKKLRHEKLVQ--LYAVVSEEPI--YIVIEYMSKGSLLD-FLKGEMGKY-LRLPQL 116
Query: 115 EDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
D+A QI + +A + +H DL +N+L+ G+N
Sbjct: 117 VDMAAQIASGMAYVERMNYVHRDLRAANILV--GEN 150
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 30.0 bits (66), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 10/96 (10%)
Query: 54 LKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHG----I 109
L+ E + K R + + + Y+ P Q + ++ EG S L LH
Sbjct: 52 LQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSS-----LYHHLHASETKF 105
Query: 110 MEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
++L DIA Q + LH +IH DL ++N+ +
Sbjct: 106 EMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL 141
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 30.0 bits (66), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 60 EARCMTKARRLGVSTPVLYAV---DPVQHTLTFEYVEGPSVKDIFL--EFGLHGIMEEQL 114
EA+ M K R + LYAV +P+ + EY+ S+ D FL E G + + QL
Sbjct: 63 EAQVMKKLRHEKLVQ--LYAVVSEEPI--YIVIEYMSKGSLLD-FLKGEMGKY-LRLPQL 116
Query: 115 EDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
D+A QI + +A + +H DL +N+L+ G+N
Sbjct: 117 VDMAAQIASGMAYVERMNYVHRDLRAANILV--GEN 150
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 30.0 bits (66), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
+ EY E ++ D+ L+ +E + QI A++ +H G+IH DL N+ I
Sbjct: 92 IQMEYCENGTLYDLIHSENLNQQRDEYWR-LFRQILEALSYIHSQGIIHRDLKPMNIFID 150
Query: 147 SGKN 150
+N
Sbjct: 151 ESRN 154
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 30.0 bits (66), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 77 LYAV---DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
LYAV +P+ + +T EY+E S+ D + +L D+A QI +A + +
Sbjct: 74 LYAVVTQEPI-YIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 131
Query: 134 IHGDLTTSNMLI 145
IH DL +N+L+
Sbjct: 132 IHRDLRAANILV 143
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 30.0 bits (66), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 10/96 (10%)
Query: 54 LKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHG----I 109
L+ E + K R + + + Y+ P Q + ++ EG S L LH
Sbjct: 64 LQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSS-----LYHHLHASETKF 117
Query: 110 MEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
++L DIA Q + LH +IH DL ++N+ +
Sbjct: 118 EMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL 153
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 77 LYAV---DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
LYAV +P+ + +T EY+E S+ D + +L D+A QI +A + +
Sbjct: 79 LYAVVTQEPI-YIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 136
Query: 134 IHGDLTTSNMLI 145
IH DL +N+L+
Sbjct: 137 IHRDLRAANILV 148
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 77 LYAV---DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
LYAV +P+ + +T EY+E S+ D + +L D+A QI +A + +
Sbjct: 75 LYAVVTQEPI-YIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 132
Query: 134 IHGDLTTSNMLI 145
IH DL +N+L+
Sbjct: 133 IHRDLRAANILV 144
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 77 LYAV---DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
LYAV +P+ + +T EY+E S+ D + +L D+A QI +A + +
Sbjct: 78 LYAVVTQEPI-YIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 135
Query: 134 IHGDLTTSNMLI 145
IH DL +N+L+
Sbjct: 136 IHRDLRAANILV 147
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 29.6 bits (65), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 77 LYAV---DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
LYAV +P+ + +T EY+E S+ D + +L D+A QI +A + +
Sbjct: 73 LYAVVTQEPI-YIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 134 IHGDLTTSNMLI 145
IH DL +N+L+
Sbjct: 131 IHRDLRAANILV 142
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 29.6 bits (65), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 77 LYAV---DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
LYAV +P+ + +T EY+E S+ D + +L D+A QI +A + +
Sbjct: 73 LYAVVTQEPI-YIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 134 IHGDLTTSNMLI 145
IH DL +N+L+
Sbjct: 131 IHRDLRAANILV 142
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 77 LYAV---DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
LYAV +P+ + +T EY+E S+ D + +L D+A QI +A + +
Sbjct: 73 LYAVVTQEPI-YIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 134 IHGDLTTSNMLI 145
IH DL +N+L+
Sbjct: 131 IHRDLRAANILV 142
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 29.6 bits (65), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 77 LYAV---DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
LYAV +P+ + +T EY+E S+ D + +L D+A QI +A + +
Sbjct: 68 LYAVVTQEPI-YIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 125
Query: 134 IHGDLTTSNMLI 145
IH DL +N+L+
Sbjct: 126 IHRDLRAANILV 137
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 29.6 bits (65), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 77 LYAV---DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
LYAV +P+ + +T EY+E S+ D + +L D+A QI +A + +
Sbjct: 79 LYAVVTQEPI-YIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 136
Query: 134 IHGDLTTSNMLI 145
IH DL +N+L+
Sbjct: 137 IHRDLRAANILV 148
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 29.6 bits (65), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 77 LYAV---DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
LYAV +P+ + +T EY+E S+ D + +L D+A QI +A + +
Sbjct: 81 LYAVVTQEPI-YIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 138
Query: 134 IHGDLTTSNMLI 145
IH DL +N+L+
Sbjct: 139 IHRDLRAANILV 150
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 29.6 bits (65), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 77 LYAV---DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
LYAV +P+ + +T EY+E S+ D + +L D+A QI +A + +
Sbjct: 82 LYAVVTQEPI-YIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 139
Query: 134 IHGDLTTSNMLI 145
IH DL +N+L+
Sbjct: 140 IHRDLRAANILV 151
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 29.6 bits (65), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Query: 53 TLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTL--TFEYVEGPSVKDIFLEFGLHGIM 110
+L++L E R M + L+ V + TL EY G V D + HG M
Sbjct: 56 SLQKLFREVRIMKVLNHPNIVK--LFEVIETEKTLYLVMEYASGGEVFDYLVA---HGRM 110
Query: 111 EEQLEDIAL-QIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
+E+ QI +A+ H ++H DL N+L+ + N
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN 151
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 29.6 bits (65), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 77 LYAV---DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
LYAV +P+ + +T EY+E S+ D + +L D+A QI +A + +
Sbjct: 73 LYAVVTQEPI-YIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 134 IHGDLTTSNMLI 145
IH DL +N+L+
Sbjct: 131 IHRDLRAANILV 142
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 29.6 bits (65), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Query: 53 TLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTL--TFEYVEGPSVKDIFLEFGLHGIM 110
+L++L E R M + L+ V + TL EY G V D + HG M
Sbjct: 56 SLQKLFREVRIMKVLNHPNIVK--LFEVIETEKTLYLVMEYASGGEVFDYLVA---HGRM 110
Query: 111 EEQLEDIAL-QIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
+E+ QI +A+ H ++H DL N+L+ + N
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN 151
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Query: 53 TLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTL--TFEYVEGPSVKDIFLEFGLHGIM 110
+L++L E R M + L+ V + TL EY G V D + HG M
Sbjct: 56 SLQKLFREVRIMKVLNHPNIVK--LFEVIETEKTLYLVMEYASGGEVFDYLVA---HGRM 110
Query: 111 EEQLEDIAL-QIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
+E+ QI +A+ H ++H DL N+L+ + N
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN 151
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Query: 53 TLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTL--TFEYVEGPSVKDIFLEFGLHGIM 110
+L++L E R M + L+ V + TL EY G V D + HG M
Sbjct: 56 SLQKLFREVRIMKVLNHPNIVK--LFEVIETEKTLYLVMEYASGGEVFDYLVA---HGRM 110
Query: 111 EEQLEDIAL-QIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
+E+ QI +A+ H ++H DL N+L+ + N
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN 151
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 77 LYAV---DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
LYAV +P+ + +T EY+E S+ D + +L D+A QI +A + +
Sbjct: 83 LYAVVTQEPI-YIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 140
Query: 134 IHGDLTTSNMLI 145
IH DL +N+L+
Sbjct: 141 IHRDLRAANILV 152
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Query: 53 TLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTL--TFEYVEGPSVKDIFLEFGLHGIM 110
+L++L E R M + L+ V + TL EY G V D + HG M
Sbjct: 56 SLQKLFREVRIMKVLNHPNIVK--LFEVIETEKTLYLVMEYASGGEVFDYLVA---HGRM 110
Query: 111 EEQLEDIAL-QIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
+E+ QI +A+ H ++H DL N+L+ + N
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN 151
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 60 EARCMTKARRLGVSTPVLYAV---DPVQHTLTFEYVEGPSVKDIFL--EFGLHGIMEEQL 114
EA+ M K R + LYAV +P+ + EY+ S+ D FL E G + + QL
Sbjct: 63 EAQVMKKLRHEKLVQ--LYAVVSEEPI--YIVTEYMSKGSLLD-FLKGEMGKY-LRLPQL 116
Query: 115 EDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
D+A QI + +A + +H DL +N+L+ G+N
Sbjct: 117 VDMAAQIASGMAYVERMNYVHRDLAAANILV--GEN 150
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 29.6 bits (65), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
TL FE+V+ + + G+ E ++D+ Q+ + LH ++H DL N+L+
Sbjct: 95 TLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV 153
Query: 146 RSG 148
S
Sbjct: 154 TSS 156
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 29.3 bits (64), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
L EYV S++D H I QL A QI +A LH IH +L N+L+
Sbjct: 95 LVMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLD 151
Query: 147 SGK 149
+ +
Sbjct: 152 NDR 154
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 29.3 bits (64), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 19/125 (15%)
Query: 29 VGRRCVVKERF---SKKYRHPSLDSKI---TLKRLNAEARCMTKARRLGVSTPVLYAVDP 82
V R + K +F S + P+L+ + LK+LN C+ K + D
Sbjct: 177 VAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP--CIIKIKNF---------FDA 225
Query: 83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSN 142
+ + E +EG + D + G + E + Q+ A+ LH+ G+IH DL N
Sbjct: 226 EDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPEN 283
Query: 143 MLIRS 147
+L+ S
Sbjct: 284 VLLSS 288
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 10/96 (10%)
Query: 54 LKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHG----I 109
L+ E + K R + + + Y+ P Q + ++ EG S L LH
Sbjct: 64 LQAFKNEVGVLRKTRHVNILLFMGYSTAP-QLAIVTQWCEGSS-----LYHHLHASETKF 117
Query: 110 MEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
++L DIA Q + LH +IH DL ++N+ +
Sbjct: 118 EMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL 153
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
TL FE+V+ + + G+ E ++D+ Q+ + LH ++H DL N+L+
Sbjct: 95 TLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV 153
Query: 146 RSG 148
S
Sbjct: 154 TSS 156
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 55/135 (40%), Gaps = 14/135 (10%)
Query: 19 AEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY 78
A+ ++ GR VK K +P+ +L++L E R M + L+
Sbjct: 29 AKVKLARHVLTGREVAVK-IIDKTQLNPT-----SLQKLFREVRIMKILNHPNIVK--LF 80
Query: 79 AVDPVQHTL--TFEYVEGPSVKDIFLEFGLHGIMEEQLEDIAL-QIGNAIAKLHDGGLIH 135
V + TL EY G V D + HG M+E+ QI +A+ H ++H
Sbjct: 81 EVIETEKTLYLVMEYASGGEVFDYLVA---HGRMKEKEARAKFRQIVSAVQYCHQKYIVH 137
Query: 136 GDLTTSNMLIRSGKN 150
DL N+L+ N
Sbjct: 138 RDLKAENLLLDGDMN 152
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
TL FE+V+ + + G+ E ++D+ Q+ + LH ++H DL N+L+
Sbjct: 95 TLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV 153
Query: 146 RSG 148
S
Sbjct: 154 TSS 156
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 19/125 (15%)
Query: 29 VGRRCVVKERF---SKKYRHPSLDSKI---TLKRLNAEARCMTKARRLGVSTPVLYAVDP 82
V R + K +F S + P+L+ + LK+LN C+ K + D
Sbjct: 163 VAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP--CIIKIKNF---------FDA 211
Query: 83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSN 142
+ + E +EG + D + G + E + Q+ A+ LH+ G+IH DL N
Sbjct: 212 EDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPEN 269
Query: 143 MLIRS 147
+L+ S
Sbjct: 270 VLLSS 274
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 60 EARCMTKARRLGVSTPVLYAV---DPVQHTLTFEYVEGPSVKDIFL--EFGLHGIMEEQL 114
EA+ M K R + LYAV +P+ + EY+ S+ D FL E G + + QL
Sbjct: 52 EAQVMKKLRHEKLVQ--LYAVVSEEPI--YIVTEYMSKGSLLD-FLKGEMGKY-LRLPQL 105
Query: 115 EDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
D+A QI + +A + +H DL +N+L+ G+N
Sbjct: 106 VDMAAQIASGMAYVERMNYVHRDLRAANILV--GEN 139
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Query: 83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQL------EDIALQIGNAIAKLHDGGLIHG 136
+Q +FE + ++ LH ++ Q+ + Q A+ LH +IH
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 137 DLTTSNMLIRSG 148
DL SN+LI S
Sbjct: 137 DLKPSNLLINSN 148
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 60 EARCMTKARRLGVSTPVLYAV---DPVQHTLTFEYVEGPSVKDIFL--EFGLHGIMEEQL 114
EA+ M K R + LYAV +P+ + EY+ S+ D FL E G + + QL
Sbjct: 54 EAQVMKKLRHEKLVQ--LYAVVSEEPI--YIVTEYMSKGSLLD-FLKGEMGKY-LRLPQL 107
Query: 115 EDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
D+A QI + +A + +H DL +N+L+ G+N
Sbjct: 108 VDMAAQIASGMAYVERMNYVHRDLRAANILV--GEN 141
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Query: 83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQL------EDIALQIGNAIAKLHDGGLIHG 136
+Q +FE + ++ LH ++ Q+ + Q A+ LH +IH
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 137 DLTTSNMLIRSG 148
DL SN+LI S
Sbjct: 137 DLKPSNLLINSN 148
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Query: 83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQL------EDIALQIGNAIAKLHDGGLIHG 136
+Q +FE + ++ LH ++ Q+ + Q A+ LH +IH
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 137 DLTTSNMLIRSG 148
DL SN+LI S
Sbjct: 137 DLKPSNLLINSN 148
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTT 140
P L E +E V+D+F G ++E+L Q+ A+ H+ G++H D+
Sbjct: 85 PDSFVLILERME--PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKD 142
Query: 141 SNMLI 145
N+LI
Sbjct: 143 ENILI 147
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
+ FE + G S D E G + + +A QI ++ LH L H DL N+L
Sbjct: 94 IVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILF 151
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 60 EARCMTKARRLGVSTPVLYAV---DPVQHTLTFEYVEGPSVKDIFL--EFGLHGIMEEQL 114
EA+ M K R + LYAV +P+ + EY+ S+ D FL E G + + QL
Sbjct: 63 EAQVMKKIRHEKLVQ--LYAVVSEEPI--YIVTEYMSKGSLLD-FLKGEMGKY-LRLPQL 116
Query: 115 EDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
D+A QI + +A + +H DL +N+L+ G+N
Sbjct: 117 VDMAAQIASGMAYVERMNYVHRDLRAANILV--GEN 150
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 60 EARCMTKARRLGVSTPVLYAV---DPVQHTLTFEYVEGPSVKDIFL-EFGLHGIMEEQLE 115
EA+ M K R + LYAV +P+ + EY+ S+ D E G + + QL
Sbjct: 63 EAQVMKKLRHEKLVQ--LYAVVSEEPI--YIVCEYMSKGSLLDFLKGEMGKY-LRLPQLV 117
Query: 116 DIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
D+A QI + +A + +H DL +N+L+ G+N
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILV--GEN 150
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 60 EARCMTKARRLGVSTPVLYAV---DPVQHTLTFEYVEGPSVKDIFL-EFGLHGIMEEQLE 115
EA+ M K R + LYAV +P+ + EY+ S+ D E G + + QL
Sbjct: 230 EAQVMKKLRHEKLVQ--LYAVVSEEPIY--IVTEYMSKGSLLDFLKGEMGKY-LRLPQLV 284
Query: 116 DIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
D+A QI + +A + +H DL +N+L+
Sbjct: 285 DMAAQIASGMAYVERMNYVHRDLRAANILV 314
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 60 EARCMTKARRLGVSTPVLYAV---DPVQHTLTFEYVEGPSVKDIFL-EFGLHGIMEEQLE 115
EA+ M K R + LYAV +P+ + EY+ S+ D E G + + QL
Sbjct: 63 EAQVMKKLRHEKLVQ--LYAVVSEEPI--YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLV 117
Query: 116 DIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
D+A QI + +A + +H DL +N+L+ G+N
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILV--GEN 150
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 19/99 (19%)
Query: 60 EARCMTKARRLGVSTPVLYAV---DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEE---- 112
EA+ M K R + LYAV +P+ + EY+ K L+F L G M +
Sbjct: 63 EAQVMKKLRHEKLVQ--LYAVVSEEPI--YIVMEYMS----KGCLLDF-LKGEMGKYLRL 113
Query: 113 -QLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
QL D+A QI + +A + +H DL +N+L+ G+N
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GEN 150
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
+ FE + G S D E G + + +A QI ++ LH L H DL N+L
Sbjct: 94 IVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILF 151
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 77 LYAV---DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
LYAV +P+ + EY+ S+ D + + L D+A Q+ +A +
Sbjct: 69 LYAVVSEEPI--YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY 126
Query: 134 IHGDLTTSNMLIRSG 148
IH DL ++N+L+ +G
Sbjct: 127 IHRDLRSANILVGNG 141
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 111 EEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
E+ + +I QI +A+ LH+ G+ H D+ N L + K
Sbjct: 167 EKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK 205
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Query: 53 TLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTL--TFEYVEGPSVKDIFLEFGLHGIM 110
+L++L E R M + L+ V + TL EY G V D + HG M
Sbjct: 57 SLQKLFREVRIMKILNHPNIVK--LFEVIETEKTLYLIMEYASGGEVFDYLVA---HGRM 111
Query: 111 EEQLEDIAL-QIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
+E+ QI +A+ H ++H DL N+L+ + N
Sbjct: 112 KEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMN 152
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 113 QLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
QL D+A QI + +A + +H DL +N+L+ G+N
Sbjct: 108 QLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GEN 143
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 101 FLEFGLHGIM-----EEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
F++ L IM EE+++ + Q+ + +H G++H DL N+ +
Sbjct: 110 FMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV 159
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
L EYV S++D H I QL A QI +A LH IH +L N+L+
Sbjct: 95 LVMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLD 151
Query: 147 SGK 149
+ +
Sbjct: 152 NDR 154
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
+ E +EG + E G E + +I IG AI LH + H D+ N+L
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 143
Query: 147 S 147
S
Sbjct: 144 S 144
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Query: 53 TLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTF--EYVEGPSVKDIFLEFGLHGIM 110
+L++L E R M + L+ V + TL EY G V D + HG M
Sbjct: 54 SLQKLFREVRIMKILNHPNIVK--LFEVIETEKTLYLIMEYASGGEVFDYLVA---HGRM 108
Query: 111 EEQLEDIAL-QIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
+E+ QI +A+ H ++H DL N+L+ + N
Sbjct: 109 KEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMN 149
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 113 QLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
QL D+A QI + +A + +H DL +N+L+ G+N
Sbjct: 105 QLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GEN 140
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 101 FLEFGLHGIM-----EEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
F++ L IM EE+++ + Q+ + +H G++H DL N+ +
Sbjct: 128 FMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV 177
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 54/128 (42%), Gaps = 17/128 (13%)
Query: 29 VGRRCVVKE---RFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ- 84
V RRCV K F+ K + S ++L EAR K + + + D +Q
Sbjct: 21 VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI----VRLHDSIQE 76
Query: 85 ---HTLTFEYVEGPSV-KDIFL-EFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLT 139
H L F+ V G + +DI EF E QI +IA H G++H +L
Sbjct: 77 ESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILESIAYCHSNGIVHRNLK 132
Query: 140 TSNMLIRS 147
N+L+ S
Sbjct: 133 PENLLLAS 140
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 119 LQIGNAIAKLHDGGLIHGDLTTSNMLI 145
LQ+ N IA HD ++H DL N+LI
Sbjct: 107 LQLLNGIAYCHDRRVLHRDLKPQNLLI 133
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 54/128 (42%), Gaps = 17/128 (13%)
Query: 29 VGRRCVVKE---RFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ- 84
V RRCV K F+ K + S ++L EAR K + + + D +Q
Sbjct: 20 VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI----VRLHDSIQE 75
Query: 85 ---HTLTFEYVEGPSV-KDIFL-EFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLT 139
H L F+ V G + +DI EF E QI +IA H G++H +L
Sbjct: 76 ESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILESIAYCHSNGIVHRNLK 131
Query: 140 TSNMLIRS 147
N+L+ S
Sbjct: 132 PENLLLAS 139
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
+ E +EG + E G E + +I IG AI LH + H D+ N+L
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 162
Query: 147 S 147
S
Sbjct: 163 S 163
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 119 LQIGNAIAKLHDGGLIHGDLTTSNMLI 145
LQ+ N IA HD ++H DL N+LI
Sbjct: 107 LQLLNGIAYCHDRRVLHRDLKPQNLLI 133
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 113 QLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
QL D+A QI + +A + +H DL +N+L+ G+N
Sbjct: 281 QLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GEN 316
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 120 QIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
QI + LH G++H DLT SN+L+ N
Sbjct: 120 QIITGMLYLHSHGILHRDLTLSNLLLTRNMN 150
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 113 QLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
QL D+A QI + +A + +H DL +N+L+ G+N
Sbjct: 281 QLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GEN 316
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 119 LQIGNAIAKLHDGGLIHGDLTTSNMLI 145
LQ+ N IA HD ++H DL N+LI
Sbjct: 107 LQLLNGIAYCHDRRVLHRDLKPQNLLI 133
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 54/128 (42%), Gaps = 17/128 (13%)
Query: 29 VGRRCVVKE---RFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ- 84
V RRCV K F+ K + S ++L EAR K + + + D +Q
Sbjct: 44 VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI----VRLHDSIQE 99
Query: 85 ---HTLTFEYVEGPSV-KDIFL-EFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLT 139
H L F+ V G + +DI EF E QI +IA H G++H +L
Sbjct: 100 ESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILESIAYCHSNGIVHRNLK 155
Query: 140 TSNMLIRS 147
N+L+ S
Sbjct: 156 PENLLLAS 163
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 113 QLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
QL D+A QI + +A + +H DL +N+L+ G+N
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GEN 150
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
+ L + +QI ++ L D L+H DL N+L++S
Sbjct: 119 QDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKS 154
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 96 SVKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 140 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 190
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 54/128 (42%), Gaps = 17/128 (13%)
Query: 29 VGRRCVVKE---RFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ- 84
V RRCV K F+ K + S ++L EAR K + + + D +Q
Sbjct: 21 VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI----VRLHDSIQE 76
Query: 85 ---HTLTFEYVEGPSV-KDIFL-EFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLT 139
H L F+ V G + +DI EF E QI +IA H G++H +L
Sbjct: 77 ESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILESIAYCHSNGIVHRNLK 132
Query: 140 TSNMLIRS 147
N+L+ S
Sbjct: 133 PENLLLAS 140
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIAL-QIGNAIAKLHDGGLIHGDLTTSNMLI 145
L EY+ G ++F++ GI E L +I A+ LH G+I+ DL N+++
Sbjct: 98 LILEYLSG---GELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML 154
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIAL-QIGNAIAKLHDGGLIHGDLTTSNMLI 145
L EY+ G ++F++ GI E L +I A+ LH G+I+ DL N+++
Sbjct: 98 LILEYLSG---GELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML 154
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 113 QLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
QL D+A QI + +A + +H DL +N+L+ G+N
Sbjct: 281 QLVDMAAQIASGMAYVERMNYVHRDLRAANILV--GEN 316
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 96 SVKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 112 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 162
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 96 SVKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 112 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 162
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 96 SVKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 93 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILI 143
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 97 VKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 99 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 148
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 97 VKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 114 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 163
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 120 QIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
Q+ A+ LH+ G+IH DL N+L+ S
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSS 149
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 120 QIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
Q+ A+ LH+ G+IH DL N+L+ S
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSS 149
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 120 QIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
Q+ A+ LH+ G+IH DL N+L+ S
Sbjct: 121 QMLLAVQYLHENGIIHRDLKPENVLLSS 148
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 96 SVKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 113 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 163
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 96 SVKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 113 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 163
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 97 VKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 98 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 147
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 120 QIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
Q+ A+ LH+ G+IH DL N+L+ S
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSS 149
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 105 GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
G E + +I IG AI LH + H D+ N+L S +
Sbjct: 154 GDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 198
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 97 VKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 126 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 175
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 97 VKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 99 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 148
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 97 VKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 99 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 148
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 97 VKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 141 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 190
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 97 VKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 94 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 143
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 97 VKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 97 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 146
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 96 SVKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 132 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 182
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 96 SVKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 140 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 190
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 113 QLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
QL D+A QI + +A + +H DL +N+L+
Sbjct: 364 QLVDMAAQIASGMAYVERMNYVHRDLRAANILV 396
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 97 VKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 126 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 175
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 124 AIAKLHDGGLIHGDLTTSNMLIRS 147
A+ LH+ G+IH DL N+L+ S
Sbjct: 132 AVQYLHENGIIHRDLKPENVLLSS 155
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 97 VKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 126 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 175
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 97 VKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 127 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 176
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 97 VKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 127 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 176
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 97 VKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 127 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 176
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 97 VKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 127 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 176
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 97 VKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 126 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 175
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
+ EY+ G S+ D+ E + E Q+ + + A+ LH +IH D+ + N+L+
Sbjct: 95 VVMEYLAGGSLTDVVTETCMD---EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 150
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 97 VKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 146 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 195
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
+ EY+ G S+ D+ E + E Q+ + + A+ LH +IH D+ + N+L+
Sbjct: 94 VVMEYLAGGSLTDVVTETCMD---EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 149
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
+ EY+ G S+ D+ E + E Q+ + + A+ LH +IH D+ + N+L+
Sbjct: 94 VVMEYLAGGSLTDVVTETCMD---EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 149
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
+ EY+ G S+ D+ E + E Q+ + + A+ LH +IH D+ + N+L+
Sbjct: 94 VVMEYLAGGSLTDVVTETCMD---EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL 149
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 97 VKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 94 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 143
>pdb|4GYI|A Chain A, Crystal Structure Of The Rio2
Kinase-AdpMG2+-Phosphoaspartate Complex From Chaetomium
Thermophilum
Length = 397
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 62/154 (40%), Gaps = 19/154 (12%)
Query: 3 ITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKY-RHPSLDSKITLKRLNA-- 59
I E +I+ + + +V + +GR + ++ Y R+ S S + L RL A
Sbjct: 103 IGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIK 162
Query: 60 EARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIAL 119
E M G PV + +HT+ V+ ++ + + D A
Sbjct: 163 EFAFMKALYEEGF--PVPEPIAQSRHTIVMSLVDALPMRQV-----------SSVPDPAS 209
Query: 120 QIGNAIA---KLHDGGLIHGDLTTSNMLIRSGKN 150
+ IA +L GLIHGD N+LIR K+
Sbjct: 210 LYADLIALILRLAKHGLIHGDFNEFNILIREEKD 243
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 96 SVKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
V+D+F G ++E+L Q+ A+ H+ G++H D+ N+LI
Sbjct: 120 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 170
>pdb|4GYG|A Chain A, Crystal Structure Of The Rio2 Kinase From Chaetomium
Thermophilum
Length = 397
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 62/154 (40%), Gaps = 19/154 (12%)
Query: 3 ITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKY-RHPSLDSKITLKRLNA-- 59
I E +I+ + + +V + +GR + ++ Y R+ S S + L RL A
Sbjct: 103 IGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIK 162
Query: 60 EARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIAL 119
E M G PV + +HT+ V+ ++ + + D A
Sbjct: 163 EFAFMKALYEEGF--PVPEPIAQSRHTIVMSLVDALPMRQV-----------SSVPDPAS 209
Query: 120 QIGNAIA---KLHDGGLIHGDLTTSNMLIRSGKN 150
+ IA +L GLIHGD N+LIR K+
Sbjct: 210 LYADLIALILRLAKHGLIHGDFNEFNILIREEKD 243
>pdb|1L7H|A Chain A, Crystal Structure Of R292k Mutant Influenza Virus
Neuraminidase In Complex With Bcx-1812
pdb|2QWA|A Chain A, The X-ray Structure Of A Drug Resistant Variant R292k Of
Tern N9 Influenza Virus Neuraminidase
pdb|2QWB|A Chain A, The X-ray Structure Of A Complex Of Sialic Acid And A Drug
Resistant Variant R292k Of Tern N9 Influenza Virus
Neuraminidase
pdb|2QWC|A Chain A, The X-Ray Structure Of A Complex Of Neu5ac2en And A Drug
Resistant Variant R292k Of Tern N9 Influenza Virus
Neuraminidase
pdb|2QWD|A Chain A, The X-Ray Structure Of A Complex Of 4-Amino-Neu5ac2en And
A Drug Resistant Variant R292k Of Tern N9 Influenza
Virus Neuraminidase
pdb|2QWE|A Chain A, The X-ray Structure Of A Complex Of 4-guanidino-neu5ac2en
And A Drug Resistant Variant R292k Of Tern N9 Influenza
Virus Neuraminidase
pdb|2QWF|A Chain A, The X-Ray Structure Of A Complex Of
N-Acetyl-4-Guanidino-6-
Methyl(Propyl)carboxamide-4,
5-Dihydro-2h-Pyran-2-Carboxylic Acid And A Drug
Resistant Variant R292k Of Tern N9 Influenza Virus
Neuraminidase
pdb|2QWG|A Chain A, The X-Ray Structure Of A Complex Of 5-N-Acetyl-4-Amino-6-
Diethylcarboxamide-4,5-Dihydro-2h-Pyran-2-Carboxylic
Acid And A Drug Resistant Variant R292k Of Tern N9
Influenza Virus Neuraminidase
pdb|2QWH|A Chain A, The X-Ray Structure Of A Complex Of
5-N-Acetyl-5-Amino-3-(1-
Ethylpropoxy)-1-Cyclohexene-1-Carboxylic Acid (Gs4071)
And A Drug Resistant Variant R292k Of Tern N9 Influenza
Virus Neuraminidase
Length = 388
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 59 AEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKD 99
AE C K G + PV+ +DPV T T +Y+ P + D
Sbjct: 205 AEITCTCKDNWQGSNRPVI-RIDPVAMTHTSQYICSPVLTD 244
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 105 GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
G E + +I IG AI LH + H D+ N+L S +
Sbjct: 114 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 158
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 117 IALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
IA +I + LH G++H DL + N+ +GK
Sbjct: 135 IAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGK 167
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 105 GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
G E + +I IG AI LH + H D+ N+L S +
Sbjct: 110 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 154
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 105 GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
G E + +I IG AI LH + H D+ N+L S +
Sbjct: 109 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 153
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 105 GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
G E + +I IG AI LH + H D+ N+L S +
Sbjct: 115 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 159
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
+ EYV+G +++DI G + ++ ++ A+ H G+IH D+ +N+LI
Sbjct: 93 IVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILIS 150
Query: 147 S 147
+
Sbjct: 151 A 151
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 77 LYAV---DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
LYAV +P+ + +T EY+E S+ D + +L D+A QI +A + +
Sbjct: 69 LYAVVTQEPI-YIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 126
Query: 134 IHGDLTTSNMLI 145
IH +L +N+L+
Sbjct: 127 IHRNLRAANILV 138
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 105 GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
G E + +I IG AI LH + H D+ N+L S +
Sbjct: 108 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 152
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 105 GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
G E + +I IG AI LH + H D+ N+L S +
Sbjct: 116 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 160
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 105 GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
G E + +I IG AI LH + H D+ N+L S +
Sbjct: 154 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 198
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 105 GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
G E + +I IG AI LH + H D+ N+L S +
Sbjct: 108 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 152
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 105 GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
G E + +I IG AI LH + H D+ N+L S +
Sbjct: 110 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 154
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 27.7 bits (60), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 120 QIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
QI A+ HD +IH D+ N+L+ S +N
Sbjct: 138 QILEALRYCHDNNIIHRDVKPENVLLASKEN 168
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 77 LYAV--DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEE-QLEDIALQIGNAIAKLHDGGL 133
LY V P + EYV G + D + HG +EE + + QI +A+ H +
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICK---HGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 134 IHGDLTTSNMLIRSGKN 150
+H DL N+L+ + N
Sbjct: 133 VHRDLKPENVLLDAHMN 149
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 105 GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
G E + +I IG AI LH + H D+ N+L S +
Sbjct: 160 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 204
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 12/126 (9%)
Query: 25 ESTF-VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV 83
E +F + R+CV K+ + + KI KR+ A + A +L P + + V
Sbjct: 21 EGSFSICRKCVHKKS------NQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEV 74
Query: 84 QHTL--TFEYVEGPSVKDIF--LEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLT 139
H TF +E + ++F ++ H E + I ++ +A++ +HD G++H DL
Sbjct: 75 FHDQLHTFLVMELLNGGELFERIKKKKH-FSETEASYIMRKLVSAVSHMHDVGVVHRDLK 133
Query: 140 TSNMLI 145
N+L
Sbjct: 134 PENLLF 139
>pdb|2JII|A Chain A, Structure Of Vaccinia Related Kinase 3
pdb|2JII|B Chain B, Structure Of Vaccinia Related Kinase 3
Length = 352
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 10/39 (25%), Positives = 23/39 (58%)
Query: 107 HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
H + E + +A ++ +A+ LH+ +HG++T N+ +
Sbjct: 154 HVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFV 192
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNM 143
Q L E+ SV D+ + + EE + I +I ++ LH +IH D+ N+
Sbjct: 101 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNV 160
Query: 144 LI 145
L+
Sbjct: 161 LL 162
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 77 LYAV--DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEE-QLEDIALQIGNAIAKLHDGGL 133
LY V P + EYV G + D + HG +EE + + QI +A+ H +
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICK---HGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 134 IHGDLTTSNMLIRSGKN 150
+H DL N+L+ + N
Sbjct: 133 VHRDLKPENVLLDAHMN 149
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 110 MEEQLEDIAL--QIGNAIAKLHDGGLIHGDLTTSNMLIRSG 148
++++ I+L QI + +A LH +IH DL N+L+ +
Sbjct: 111 LQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTS 151
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 105 GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
G E + +I IG AI LH + H D+ N+L S +
Sbjct: 124 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 168
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
L FE + GPS+ +I +G E ++ ++I A+ L L H DL N+L+
Sbjct: 113 LIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILL 170
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 110 MEEQLEDIAL--QIGNAIAKLHDGGLIHGDLTTSNMLIRSG 148
++++ I+L QI + +A LH +IH DL N+L+ +
Sbjct: 111 LQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTS 151
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 113 QLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
QL D++ QI + +A + +H DL +N+L+ G+N
Sbjct: 112 QLVDMSAQIASGMAYVERMNYVHRDLRAANILV--GEN 147
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 121 IGNAIAKLHDGGLIHGDLTTSNML 144
IG + LH G++H DL SN+L
Sbjct: 130 IGKTVEYLHSQGVVHRDLKPSNIL 153
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 110 MEEQLEDIAL--QIGNAIAKLHDGGLIHGDLTTSNMLIRSG 148
++++ I+L QI + +A LH +IH DL N+L+ +
Sbjct: 129 LQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTS 169
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 113 QLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN 150
QL D++ QI + +A + +H DL +N+L+ G+N
Sbjct: 112 QLVDMSAQIASGMAYVERMNYVHRDLRAANILV--GEN 147
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 121 IGNAIAKLHDGGLIHGDLTTSNML 144
IG + LH G++H DL SN+L
Sbjct: 130 IGKTVEYLHSQGVVHRDLKPSNIL 153
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 110 MEEQLEDIAL--QIGNAIAKLHDGGLIHGDLTTSNMLIRSG 148
++++ I+L QI + +A LH +IH DL N+L+ +
Sbjct: 129 LQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTS 169
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 105 GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
G E + +I IG AI LH + H D+ N+L S +
Sbjct: 110 GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 154
>pdb|3KV1|A Chain A, Crystal Structure Of Putative Sugar-Binding Domain Of
Transcriptional Repressor From Vibrio Fischeri
Length = 267
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 12/58 (20%)
Query: 57 LNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQL 114
+NA+ C A++ G S+ LYA P YV PS++ F E H ++E L
Sbjct: 98 INADHICRRLAKKYGGSSETLYA--PA-------YVNDPSLRSAFXE---HATIKETL 143
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 107 HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
+ +E ++ + Q+ + +H G+IH DL SN+ +
Sbjct: 118 QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAV 156
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
+ EY G + D + + EE+ + QI +A+A +H G H DL N+L
Sbjct: 85 MVLEYCPGGELFDYII--SQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLF 141
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 124 AIAKLHDGGLIHGDLTTSNMLIRSG 148
A+ +H G++H DL +N LI G
Sbjct: 139 AVHTIHQHGIVHSDLKPANFLIVDG 163
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 124 AIAKLHDGGLIHGDLTTSNMLIRSG 148
A+ +H G++H DL +N LI G
Sbjct: 139 AVHTIHQHGIVHSDLKPANFLIVDG 163
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 124 AIAKLHDGGLIHGDLTTSNMLIRSG 148
A+ +H G++H DL +N LI G
Sbjct: 123 AVHTIHQHGIVHSDLKPANFLIVDG 147
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 124 AIAKLHDGGLIHGDLTTSNMLIRSG 148
A+ +H G++H DL +N LI G
Sbjct: 120 AVHTIHQHGIVHSDLKPANFLIVDG 144
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 124 AIAKLHDGGLIHGDLTTSNMLIRSG 148
A+ +H G++H DL +N LI G
Sbjct: 119 AVHTIHQHGIVHSDLKPANFLIVDG 143
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 27.3 bits (59), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
+ EYV+G +++DI G + ++ ++ A+ H G+IH D+ +N++I
Sbjct: 93 IVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 147 S 147
+
Sbjct: 151 A 151
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 27.3 bits (59), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
L FE++ +KD L GI ++ Q+ +A H ++H DL N+LI
Sbjct: 79 LVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLIN 137
Query: 147 S 147
+
Sbjct: 138 T 138
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 124 AIAKLHDGGLIHGDLTTSNMLIRSG 148
A+ +H G++H DL +N LI G
Sbjct: 167 AVHTIHQHGIVHSDLKPANFLIVDG 191
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 27.3 bits (59), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
+ EYV+G +++DI G + ++ ++ A+ H G+IH D+ +N++I
Sbjct: 93 IVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 147 S 147
+
Sbjct: 151 A 151
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 27.3 bits (59), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
+ EYV+G +++DI G + ++ ++ A+ H G+IH D+ +N++I
Sbjct: 93 IVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 147 S 147
+
Sbjct: 151 A 151
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
+ EYV+G +++DI G + ++ ++ A+ H G+IH D+ +N++I
Sbjct: 93 IVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 147 S 147
+
Sbjct: 151 A 151
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 107 HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
+ +E ++ + Q+ + +H G+IH DL SN+ +
Sbjct: 126 QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAV 164
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 124 AIAKLHDGGLIHGDLTTSNMLIRSG 148
A+ +H G++H DL +N LI G
Sbjct: 167 AVHTIHQHGIVHSDLKPANFLIVDG 191
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 26.9 bits (58), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 107 HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
+ +E ++ + Q+ + +H G+IH DL SN+ +
Sbjct: 126 QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAV 164
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 26.9 bits (58), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 117 IALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG 148
A+++ I ++HD +IHGD+ N ++ +G
Sbjct: 177 FAMRMLYMIEQVHDCEIIHGDIKPDNFILGNG 208
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 26.9 bits (58), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 124 AIAKLHDGGLIHGDLTTSNMLIRSG 148
A+ +H G++H DL +N LI G
Sbjct: 167 AVHTIHQHGIVHSDLKPANFLIVDG 191
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 26.9 bits (58), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
+ EYV+G +++DI G + ++ ++ A+ H G+IH D+ +N++I
Sbjct: 110 IVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 167
Query: 147 S 147
+
Sbjct: 168 A 168
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 26.9 bits (58), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
L FE++ +KD L GI ++ Q+ +A H ++H DL N+LI
Sbjct: 81 LVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN 139
Query: 147 S 147
+
Sbjct: 140 T 140
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 26.9 bits (58), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
L FE++ +KD L GI ++ Q+ +A H ++H DL N+LI
Sbjct: 82 LVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN 140
Query: 147 S 147
+
Sbjct: 141 T 141
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 26.9 bits (58), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Query: 81 DPVQHT--LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDL 138
DPV T L FE+V K ++ + + + +I A+ H G++H D+
Sbjct: 103 DPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDV 157
Query: 139 TTSNMLI 145
N+LI
Sbjct: 158 KPHNVLI 164
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 26.9 bits (58), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
Query: 81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIA--LQIGNAIAKLHDGGLIHGDL 138
DPV + + EYV G S+K G E IA L+I A++ LH GL++ DL
Sbjct: 156 DPVGY-IVMEYVGGQSLKRS------KGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDL 208
Query: 139 TTSNMLI 145
N+++
Sbjct: 209 KPENIML 215
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Query: 78 YAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGD 137
YA + H + F + K + L G+ ++ + QI + I LH ++H D
Sbjct: 101 YAEHDLWHIIKFHRASKANKKPVQLPRGM-------VKSLLYQILDGIHYLHANWVLHRD 153
Query: 138 LTTSNMLI 145
L +N+L+
Sbjct: 154 LKPANILV 161
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 90 EYVEGPSVKDIFLEF--GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
EY+E S+ D FL G IM QL + +G + L D G +H DL N+L+ S
Sbjct: 130 EYMENGSL-DTFLRTHDGQFTIM--QLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDS 186
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 26.9 bits (58), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 90 EYVEGPSVKDIFLEF--GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
EY+E S+ D FL G IM QL + +G + L D G +H DL N+L+ S
Sbjct: 130 EYMENGSL-DTFLRTHDGQFTIM--QLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDS 186
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 26.6 bits (57), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 118 ALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
A +I +A+ LHD G+I+ DL N+L+
Sbjct: 130 AAEIISALMFLHDKGIIYRDLKLDNVLL 157
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 26.6 bits (57), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
EY+E S+ D FL+ QL + I + L D G +H DL N+LI S
Sbjct: 103 EYMENGSL-DTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINS 159
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 120 QIGNAIAKLHDGGLIHGDLTTSNMLIRSG 148
Q+ + + LH G++H D+ N+L+ +G
Sbjct: 117 QLIDGLEYLHSQGIVHKDIKPGNLLLTTG 145
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 26.6 bits (57), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
EY+E S+ D FL QL + I + + L D G +H DL N+LI S
Sbjct: 126 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINS 182
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 26.6 bits (57), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIAL-QIGNAIAKLHDGGLIHGDLTTSNMLI 145
L EY G V D + HG +E+ QI +A+ H ++H DL N+L+
Sbjct: 90 LVXEYASGGEVFDYLVA---HGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL 146
Query: 146 RSGKN 150
+ N
Sbjct: 147 DADXN 151
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 26.6 bits (57), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
EY+E S+ D FL QL + IG+ + L D +H DL N+L+ S
Sbjct: 95 EYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNS 151
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 26.6 bits (57), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 94 GPSVKDIF----LEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
GPS++D+F +F L ++ +A Q+ + I +H IH D+ N L+ GK
Sbjct: 86 GPSLEDLFNFCSRKFSLKTVLL-----LADQMISRIEYIHSKNFIHRDVKPDNFLMGLGK 140
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 26.6 bits (57), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 94 GPSVKDIF----LEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
GPS++D+F +F L ++ +A Q+ + I +H IH D+ N L+ GK
Sbjct: 88 GPSLEDLFNFCSRKFSLKTVLL-----LADQMISRIEYIHSKNFIHRDVKPDNFLMGLGK 142
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 26.6 bits (57), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
EY+E S+ D FL QL + IG+ + L D +H DL N+L+ S
Sbjct: 89 EYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNS 145
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 26.6 bits (57), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 94 GPSVKDIF----LEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
GPS++D+F +F L ++ +A Q+ + I +H IH D+ N L+ GK
Sbjct: 88 GPSLEDLFNFCSRKFSLKTVLL-----LADQMISRIEYIHSKNFIHRDVKPDNFLMGLGK 142
>pdb|1NQE|A Chain A, Outer Membrane Cobalamin Transporter (btub) From E. Coli
pdb|1NQG|A Chain A, Outer Membrane Cobalamin Transporter (Btub) From E. Coli,
With Bound Calcium
pdb|1NQH|A Chain A, Outer Membrane Cobalamin Transporter (Btub) From E. Coli,
With Bound Calcium And Cyanocobalamin (Vitamin B12)
Substrate
pdb|1UJW|A Chain A, Structure Of The Complex Between Btub And Colicin E3
Receptor Binding Domain
pdb|2GUF|A Chain A, In Meso Crystal Structure Of The Cobalamin Transporter,
Btub
pdb|2YSU|A Chain A, Structure Of The Complex Between Btub And Colicin E2
Receptor Binding Domain
Length = 594
Score = 26.2 bits (56), Expect = 8.1, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 20 EARVFESTFVGRRCVVKERFSKKYRHPSLD----SKITLKRLNAEARCMTKARRLGVSTP 75
+++ +E F G V R S YR+ D TLK N KAR GV
Sbjct: 414 KSKQWEGAFEGLTAGVNWRISG-YRNDVSDLIDYDDHTLKYYNE-----GKARIKGVEAT 467
Query: 76 VLYAVDPVQHTLTFEYVEG 94
+ P+ HT++++YV+
Sbjct: 468 ANFDTGPLTHTVSYDYVDA 486
>pdb|1NQF|A Chain A, Outer Membrane Cobalamin Transporter (Btub) From E. Coli,
Methionine Substiution Construct For Se-Met Sad Phasing
Length = 594
Score = 26.2 bits (56), Expect = 8.1, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 20 EARVFESTFVGRRCVVKERFSKKYRHPSLD----SKITLKRLNAEARCMTKARRLGVSTP 75
+++ +E F G V R S YR+ D TLK N KAR GV
Sbjct: 414 KSKQWEGAFEGLTAGVNWRISG-YRNDVSDLIDYDDHTLKYYNE-----GKARIKGVEAT 467
Query: 76 VLYAVDPVQHTLTFEYVEG 94
+ P+ HT++++YV+
Sbjct: 468 ANFDTGPLTHTVSYDYVDA 486
>pdb|3M8B|A Chain A, Crystal Structure Of Spin-Labeled Btub V10r1 In The Apo
State
pdb|3M8D|A Chain A, Crystal Structure Of Spin-Labeled Btub V10r1 With Bound
Calcium And Cyanocobalamin
Length = 594
Score = 26.2 bits (56), Expect = 8.1, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 20 EARVFESTFVGRRCVVKERFSKKYRHPSLD----SKITLKRLNAEARCMTKARRLGVSTP 75
+++ +E F G V R S YR+ D TLK N KAR GV
Sbjct: 414 KSKQWEGAFEGLTAGVNWRISG-YRNDVSDLIDYDDHTLKYYNE-----GKARIKGVEAT 467
Query: 76 VLYAVDPVQHTLTFEYVEG 94
+ P+ HT++++YV+
Sbjct: 468 ANFDTGPLTHTVSYDYVDA 486
>pdb|3RGN|A Chain A, Crystal Structure Of Spin-Labeled Btub W371r1
Length = 594
Score = 26.2 bits (56), Expect = 8.1, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 20 EARVFESTFVGRRCVVKERFSKKYRHPSLD----SKITLKRLNAEARCMTKARRLGVSTP 75
+++ +E F G V R S YR+ D TLK N KAR GV
Sbjct: 414 KSKQWEGAFEGLTAGVNWRISG-YRNDVSDLIDYDDHTLKYYNE-----GKARIKGVEAT 467
Query: 76 VLYAVDPVQHTLTFEYVEG 94
+ P+ HT++++YV+
Sbjct: 468 ANFDTGPLTHTVSYDYVDA 486
>pdb|3RGM|A Chain A, Crystal Structure Of Spin-Labeled Btub T156r1
Length = 594
Score = 26.2 bits (56), Expect = 8.1, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 20 EARVFESTFVGRRCVVKERFSKKYRHPSLD----SKITLKRLNAEARCMTKARRLGVSTP 75
+++ +E F G V R S YR+ D TLK N KAR GV
Sbjct: 414 KSKQWEGAFEGLTAGVNWRISG-YRNDVSDLIDYDDHTLKYYNE-----GKARIKGVEAT 467
Query: 76 VLYAVDPVQHTLTFEYVEG 94
+ P+ HT++++YV+
Sbjct: 468 ANFDTGPLTHTVSYDYVDA 486
>pdb|2GSK|A Chain A, Structure Of The Btub:tonb Complex
Length = 590
Score = 26.2 bits (56), Expect = 8.1, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 20 EARVFESTFVGRRCVVKERFSKKYRHPSLD----SKITLKRLNAEARCMTKARRLGVSTP 75
+++ +E F G V R S YR+ D TLK N KAR GV
Sbjct: 410 KSKQWEGAFEGLTAGVNWRISG-YRNDVSDLIDYDDHTLKYYNE-----GKARIKGVEAT 463
Query: 76 VLYAVDPVQHTLTFEYVEG 94
+ P+ HT++++YV+
Sbjct: 464 ANFDTGPLTHTVSYDYVDA 482
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 26.2 bits (56), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
+ EY+ G S+ D+ E + E Q+ + + A+ LH +IH ++ + N+L+
Sbjct: 95 VVMEYLAGGSLTDVVTETCMD---EGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILL 150
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 26.2 bits (56), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
EY+E S+ D FL QL + I + + L D G +H DL N+LI S
Sbjct: 97 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 153
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 26.2 bits (56), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 9/29 (31%), Positives = 20/29 (68%)
Query: 117 IALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
++L+I + + +H+ +HGD+ SN+L+
Sbjct: 157 LSLRILDILEYIHEHEYVHGDIKASNLLL 185
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 26.2 bits (56), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 9/29 (31%), Positives = 20/29 (68%)
Query: 117 IALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
++L+I + + +H+ +HGD+ SN+L+
Sbjct: 157 LSLRILDILEYIHEHEYVHGDIKASNLLL 185
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 26.2 bits (56), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
EY+E S+ D FL QL + I + + L D G +H DL N+LI S
Sbjct: 114 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 170
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 26.2 bits (56), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
L E V G + D E + EE+ + QI N + LH + H DL N+++
Sbjct: 91 LILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 26.2 bits (56), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
EY+E S+ D FL QL + IG+ + L D +H DL N+L+ S
Sbjct: 110 EYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNS 166
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 26.2 bits (56), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
EY+E S+ D FL QL + I + + L D G +H DL N+LI S
Sbjct: 124 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 180
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 26.2 bits (56), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 120 QIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
QI A+ H G++H DL N+L+ S
Sbjct: 111 QILEAVLHCHQMGVVHRDLKPENLLLAS 138
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 26.2 bits (56), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
L E V G + D E + EE+ + QI N + LH + H DL N+++
Sbjct: 91 LILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 26.2 bits (56), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
EY+E S+ D FL QL + I + + L D G +H DL N+LI S
Sbjct: 126 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 26.2 bits (56), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
EY+E S+ D FL QL + I + + L D G +H DL N+LI S
Sbjct: 126 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 26.2 bits (56), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
EY+E S+ D FL QL + I + + L D G +H DL N+LI S
Sbjct: 126 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 26.2 bits (56), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
EY+E S+ D FL QL + I + + L D G +H DL N+LI S
Sbjct: 126 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 26.2 bits (56), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
EY+E S+ D FL QL + I + + L D G +H DL N+LI S
Sbjct: 126 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 26.2 bits (56), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 26/61 (42%)
Query: 87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
L EY G + + L + E + + QI + LH ++H DL N+L+
Sbjct: 106 LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLS 165
Query: 147 S 147
S
Sbjct: 166 S 166
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,116,598
Number of Sequences: 62578
Number of extensions: 149442
Number of successful extensions: 1186
Number of sequences better than 100.0: 329
Number of HSP's better than 100.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 133
Number of HSP's that attempted gapping in prelim test: 987
Number of HSP's gapped (non-prelim): 329
length of query: 164
length of database: 14,973,337
effective HSP length: 91
effective length of query: 73
effective length of database: 9,278,739
effective search space: 677347947
effective search space used: 677347947
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.7 bits)