BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031201
(164 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q39433|RB1BV_BETVU Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1
Length = 215
Score = 323 bits (827), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 155/158 (98%), Positives = 157/158 (99%)
Query: 1 MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYD LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKVLVGNKADMDESKRAVPTSKGQALADEYGIKFFET 158
VNK+LVGNKADMDESKRAVPT+KGQALADEYGIKFFET
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFET 158
>sp|P28186|RAE1C_ARATH Ras-related protein RABE1c OS=Arabidopsis thaliana GN=RABE1C PE=1
SV=1
Length = 216
Score = 322 bits (826), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 155/158 (98%), Positives = 157/158 (99%)
Query: 1 MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYD LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKVLVGNKADMDESKRAVPTSKGQALADEYGIKFFET 158
VNK+LVGNKADMDESKRAVPT+KGQALADEYGIKFFET
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFET 158
>sp|O24466|RAE1A_ARATH Ras-related protein RABE1a OS=Arabidopsis thaliana GN=RABE1A PE=1
SV=1
Length = 216
Score = 296 bits (759), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/148 (96%), Positives = 146/148 (98%)
Query: 11 DYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYD LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKA 130
TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASD+VNK+LVGNKA
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKA 130
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFET 158
DMDESKRAVP SKGQALADEYG+KFFET
Sbjct: 131 DMDESKRAVPKSKGQALADEYGMKFFET 158
>sp|Q9LZD4|RAE1D_ARATH Ras-related protein RABE1d OS=Arabidopsis thaliana GN=RABE1D PE=1
SV=1
Length = 216
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 147/158 (93%), Positives = 154/158 (97%)
Query: 1 MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MA PARAR+DYD LIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFKIRT+ELD
Sbjct: 1 MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW++NIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDN 120
Query: 121 VNKVLVGNKADMDESKRAVPTSKGQALADEYGIKFFET 158
VNK+LVGNKADMDESKRAVPT+KGQALADEYGIKFFET
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFET 158
>sp|Q9SF91|RAE1E_ARATH Ras-related protein RABE1e OS=Arabidopsis thaliana GN=RABE1E PE=1
SV=1
Length = 218
Score = 290 bits (741), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 147/158 (93%), Positives = 154/158 (97%)
Query: 1 MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MA PARAR+DYD LIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFKIRT+ELD
Sbjct: 1 MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW++NIEQHASD+
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDS 120
Query: 121 VNKVLVGNKADMDESKRAVPTSKGQALADEYGIKFFET 158
VNK+LVGNKADMDESKRAVPTSKGQALADEYGIKFFET
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFET 158
>sp|P20790|RAB8A_DICDI Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A
PE=3 SV=1
Length = 208
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/164 (78%), Positives = 142/164 (86%), Gaps = 1/164 (0%)
Query: 1 MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
M +P A YD LIKLLLIGDSGVGKSCLLLRFS+ SFT SFITTIGIDFKIRTIEL+
Sbjct: 1 MTSPATNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELE 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SF NIRNWIRNIEQHA+D+
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDS 120
Query: 121 VNKVLVGNKADMDESKRAVPTSKGQALADEYGIKFFETVMQRQI 164
VNK+L+GNK DM E K+ V +S+G++LADEYGIKF ET + I
Sbjct: 121 VNKMLIGNKCDMAE-KKVVDSSRGKSLADEYGIKFLETSAKNSI 163
>sp|P20791|RAB8B_DICDI Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B
PE=2 SV=1
Length = 203
Score = 264 bits (675), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/164 (78%), Positives = 142/164 (86%), Gaps = 1/164 (0%)
Query: 1 MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
M +P A YD L+KLLLIGDSGVGKSCLLLRFSDGSFT SFI TIGIDFKIRTIEL+
Sbjct: 1 MTSPATNKPAAYDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELE 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SF +IRNWIRNIEQHASD+
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDS 120
Query: 121 VNKVLVGNKADMDESKRAVPTSKGQALADEYGIKFFETVMQRQI 164
VNK+L+GNK DM E K+ V +S+G++LADEYGIKF ET + +
Sbjct: 121 VNKMLIGNKCDMTE-KKVVDSSRGKSLADEYGIKFLETSAKNSV 163
>sp|P36861|YPTV2_VOLCA GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1
Length = 217
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 118/158 (74%), Positives = 139/158 (87%), Gaps = 2/158 (1%)
Query: 1 MAAPPARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MA P R DYD LIKLLL+GDSGVGKSCLLLRF+D FT+SFITTIGIDFKI+ +++D
Sbjct: 1 MARIPGRP--DYDALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVD 58
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GK +KLQIWDTAGQERFRTIT+AYYRGA GI+LVYD+TDE+SFNN+RNW+RNIEQHASDN
Sbjct: 59 GKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDN 118
Query: 121 VNKVLVGNKADMDESKRAVPTSKGQALADEYGIKFFET 158
VNK+LVGNK D+ E KR V ++GQALADE+G +F+ET
Sbjct: 119 VNKILVGNKLDLAEDKRVVSIARGQALADEFGFRFYET 156
>sp|P17609|YPT2_SCHPO GTP-binding protein ypt2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt2 PE=3 SV=1
Length = 200
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 116/146 (79%), Positives = 128/146 (87%), Gaps = 1/146 (0%)
Query: 12 YDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD LIKLLLIGDSGVGKSCLLLRFS+ SFT SFITTIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 65
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
AGQERFRTITTAYYRGAMGILL+YDVTD+ SF+N+R W N+EQHAS+NV K+L+GNK D
Sbjct: 66 AGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCD 125
Query: 132 MDESKRAVPTSKGQALADEYGIKFFE 157
E +R V +GQALADE G+KF E
Sbjct: 126 C-EDQRQVSFEQGQALADELGVKFLE 150
>sp|P70550|RAB8B_RAT Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1
Length = 207
Score = 232 bits (591), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 108/147 (73%), Positives = 130/147 (88%), Gaps = 1/147 (0%)
Query: 12 YDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD L KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFET 158
M++ KR V +G+ LA +YGIKF ET
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLET 150
>sp|P61028|RAB8B_MOUSE Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1
Length = 207
Score = 232 bits (591), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 108/147 (73%), Positives = 130/147 (88%), Gaps = 1/147 (0%)
Query: 12 YDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD L KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFET 158
M++ KR V +G+ LA +YGIKF ET
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLET 150
>sp|Q5REC9|RAB8B_PONAB Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1
Length = 207
Score = 232 bits (591), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 108/147 (73%), Positives = 130/147 (88%), Gaps = 1/147 (0%)
Query: 12 YDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD L KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFET 158
M++ KR V +G+ LA +YGIKF ET
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLET 150
>sp|Q92930|RAB8B_HUMAN Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2
Length = 207
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 108/147 (73%), Positives = 130/147 (88%), Gaps = 1/147 (0%)
Query: 12 YDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD L KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFET 158
M++ KR V +G+ LA +YGIKF ET
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLET 150
>sp|P22128|RAB8_DIPOM Ras-related protein Rab-8 OS=Diplobatis ommata PE=2 SV=1
Length = 210
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 108/153 (70%), Positives = 131/153 (85%), Gaps = 1/153 (0%)
Query: 12 YDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD L KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRT+ELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
AGQERFRTITTAYYRGAMGI+ VYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETVMQRQI 164
M+E KR V +G+ LA +YGIKF ET + I
Sbjct: 125 MNE-KRQVSKERGEKLAIDYGIKFLETSAKSSI 156
>sp|P35280|RAB8A_RAT Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2
Length = 207
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/153 (71%), Positives = 132/153 (86%), Gaps = 1/153 (0%)
Query: 12 YDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD L KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETVMQRQI 164
+++ KR V +G+ LA +YGIKF ET + I
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANI 156
>sp|P55258|RAB8A_MOUSE Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2
Length = 207
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/153 (71%), Positives = 132/153 (86%), Gaps = 1/153 (0%)
Query: 12 YDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD L KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETVMQRQI 164
+++ KR V +G+ LA +YGIKF ET + I
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANI 156
>sp|Q2HJI8|RAB8B_BOVIN Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1
Length = 207
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 107/146 (73%), Positives = 129/146 (88%), Gaps = 1/146 (0%)
Query: 12 YDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD L KLLLIGDSGVGK+CLL RFS+ +F T+FI+TIGIDFKIRTIELDGK+IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFE 157
M++ KR V +G+ LA +YGIKF E
Sbjct: 125 MND-KRQVSKERGEKLAIDYGIKFLE 149
>sp|Q4R5P1|RAB8A_MACFA Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2
SV=1
Length = 207
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 109/153 (71%), Positives = 132/153 (86%), Gaps = 1/153 (0%)
Query: 12 YDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD L KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETVMQRQI 164
+++ KR V +G+ LA +YGIKF ET + I
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANI 156
>sp|P61006|RAB8A_HUMAN Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1
Length = 207
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 109/153 (71%), Positives = 132/153 (86%), Gaps = 1/153 (0%)
Query: 12 YDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD L KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETVMQRQI 164
+++ KR V +G+ LA +YGIKF ET + I
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANI 156
>sp|P61007|RAB8A_CANFA Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1
Length = 207
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 109/153 (71%), Positives = 132/153 (86%), Gaps = 1/153 (0%)
Query: 12 YDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD L KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETVMQRQI 164
+++ KR V +G+ LA +YGIKF ET + I
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANI 156
>sp|A4FV54|RAB8A_BOVIN Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1
Length = 207
Score = 230 bits (586), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 109/153 (71%), Positives = 132/153 (86%), Gaps = 1/153 (0%)
Query: 12 YDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD L KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETVMQRQI 164
+++ KR V +G+ LA +YGIKF ET + I
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANI 156
>sp|Q5R4A3|RAB8A_PONAB Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1
Length = 207
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 109/153 (71%), Positives = 132/153 (86%), Gaps = 1/153 (0%)
Query: 12 YDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD L KLLLIGDSGVGK+C+L RFS+ +F ++FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETVMQRQI 164
+++ KR V +G+ LA +YGIKF ET + I
Sbjct: 125 VND-KRQVSKERGEKLALDYGIKFMETSAKANI 156
>sp|P41924|RYL1_YARLI Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=RYL1 PE=3 SV=1
Length = 203
Score = 228 bits (580), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/159 (68%), Positives = 130/159 (81%), Gaps = 1/159 (0%)
Query: 6 ARARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
+ ++ YD LIKLLLIGDSGVGKSCLLLRF + FT SFITTIGIDFKIRTI++ +R+K
Sbjct: 2 SHSQRTYDLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVK 61
Query: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVL 125
LQ+WDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNI NW +N++ +A++ V +L
Sbjct: 62 LQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELIL 121
Query: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETVMQRQI 164
VGNK D+DE KR V T +GQALAD++GI F E + I
Sbjct: 122 VGNKCDLDE-KRVVSTEQGQALADKFGIPFLEASSKTNI 159
>sp|Q5F470|RAB8A_CHICK Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1
Length = 207
Score = 226 bits (575), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 107/153 (69%), Positives = 127/153 (83%), Gaps = 1/153 (0%)
Query: 12 YDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD L KLLLIGDSGVGK+C L RFS+ +F +FI+TIGIDFKIRTIELDGKRIKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
AGQERFRTITTAYYRGAMGI+LVYD+T+E SF NIRNW+RNIE+HAS +V K+++GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETVMQRQI 164
++ KR V +G+ LA +GIKF ET + I
Sbjct: 125 AND-KRQVSREQGEKLAASFGIKFMETSAKANI 156
>sp|Q5R5U1|RAB10_PONAB Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1
Length = 200
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 131/157 (83%), Gaps = 1/157 (0%)
Query: 8 ARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETVMQRQI 164
NK DMD+ KR VP KG+ +A E+GI+FFET + I
Sbjct: 122 NKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANI 157
>sp|P61027|RAB10_MOUSE Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1
Length = 200
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 131/157 (83%), Gaps = 1/157 (0%)
Query: 8 ARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETVMQRQI 164
NK DMD+ KR VP KG+ +A E+GI+FFET + I
Sbjct: 122 NKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANI 157
>sp|P61026|RAB10_HUMAN Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1
Length = 200
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 131/157 (83%), Gaps = 1/157 (0%)
Query: 8 ARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETVMQRQI 164
NK DMD+ KR VP KG+ +A E+GI+FFET + I
Sbjct: 122 NKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANI 157
>sp|P28188|RAD2A_ARATH Ras-related protein RABD2a OS=Arabidopsis thaliana GN=RABD2A PE=1
SV=3
Length = 203
Score = 224 bits (570), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 104/148 (70%), Positives = 126/148 (85%), Gaps = 1/148 (0%)
Query: 11 DYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD L KLLLIGDSGVGKSCLLLRFSD S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFET 158
D+ E+ RA+P +A ADE GI F ET
Sbjct: 124 DLTEN-RAIPYETAKAFADEIGIPFMET 150
>sp|P24409|RAB10_CANFA Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=1 SV=1
Length = 200
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 131/157 (83%), Gaps = 1/157 (0%)
Query: 8 ARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETVMQRQI 164
NK DMD+ KR VP KG+ +A E+GI+FFET + I
Sbjct: 122 NKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKVNI 157
>sp|Q5ZIT5|RAB10_CHICK Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1
Length = 200
Score = 223 bits (567), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
Query: 8 ARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGID KI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETVMQRQI 164
NK DM E KR VP +KG+ +A E+GI+FFET + I
Sbjct: 122 NKCDM-EDKRVVPKAKGEQIAREHGIRFFETSAKANI 157
>sp|P22127|RAB10_DIPOM Ras-related protein Rab-10 OS=Diplobatis ommata PE=2 SV=1
Length = 200
Score = 220 bits (560), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 129/157 (82%), Gaps = 1/157 (0%)
Query: 8 ARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETVMQRQI 164
NK DM E KR V SKG+ +A E+ I+FFET + I
Sbjct: 122 NKCDM-EDKRVVLKSKGEQIAREHAIRFFETSAKANI 157
>sp|Q39571|YPTC1_CHLRE GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1
PE=3 SV=1
Length = 203
Score = 219 bits (557), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 102/148 (68%), Positives = 127/148 (85%), Gaps = 1/148 (0%)
Query: 11 DYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD L KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRT+ELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFET 158
D+ SK+ V S +A ADE GI F ET
Sbjct: 124 DL-TSKKVVEYSVAKAFADEIGIPFLET 150
>sp|P40392|RIC1_ORYSJ Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1
PE=2 SV=2
Length = 202
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 102/148 (68%), Positives = 125/148 (84%), Gaps = 1/148 (0%)
Query: 11 DYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD L KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFET 158
D+ E+ R V G+ALADE GI F ET
Sbjct: 124 DLAEN-RVVSYEAGKALADEIGIPFLET 150
>sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1
Length = 203
Score = 217 bits (552), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 101/148 (68%), Positives = 124/148 (83%), Gaps = 1/148 (0%)
Query: 11 DYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD L KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFET 158
D+ +K V T +A ADE GI F ET
Sbjct: 124 DLTANK-VVATETAKAFADEMGIPFMET 150
>sp|Q05974|RAB1A_LYMST Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1
Length = 205
Score = 216 bits (550), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 100/148 (67%), Positives = 127/148 (85%), Gaps = 1/148 (0%)
Query: 11 DYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
DYD L KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK+
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKS 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFET 158
D+ +K+ V + + AD+ GI F ET
Sbjct: 127 DL-TTKKVVDFTTAKEYADQLGIPFLET 153
>sp|P35281|RAB10_RAT Ras-related protein Rab-10 OS=Rattus norvegicus GN=Rab10 PE=1 SV=1
Length = 200
Score = 216 bits (549), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 101/157 (64%), Positives = 127/157 (80%), Gaps = 1/157 (0%)
Query: 8 ARADYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
A+ YD L KLLLIGDSGVGK+C+L RFSD +F T+FI+TI IDFKI+T+EL GK+IKLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIEIDFKIKTVELQGKKIKLQ 61
Query: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVG 127
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI+QHA+++V ++L+
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDQHANEDVERMLLR 121
Query: 128 NKADMDESKRAVPTSKGQALADEYGIKFFETVMQRQI 164
NK DMD KR VP KG+ +A E+ I+FFET + I
Sbjct: 122 NKCDMDH-KRVVPKGKGEQIAREHRIRFFETSAKANI 157
>sp|P31584|YPTV1_VOLCA GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1
Length = 203
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/148 (67%), Positives = 125/148 (84%), Gaps = 1/148 (0%)
Query: 11 DYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD L KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRT+ELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFET 158
D+ K+ V +A ADE GI F ET
Sbjct: 124 DL-TGKKVVDYQAAKAFADEIGIPFLET 150
>sp|Q01890|YPT1_PHYIN Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1
PE=3 SV=1
Length = 201
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 125/148 (84%), Gaps = 1/148 (0%)
Query: 11 DYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD L KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++A +NVNK+LVGNK+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKS 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFET 158
D+ +KR V T + A+ GI+F ET
Sbjct: 124 DL-TAKRVVSTDAAKEFAESLGIEFLET 150
>sp|Q6NYB7|RAB1A_RAT Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3
Length = 205
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 125/148 (84%), Gaps = 1/148 (0%)
Query: 11 DYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD L KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFET 158
D+ +K+ V + + AD GI F ET
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLET 153
>sp|P62821|RAB1A_MOUSE Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3
Length = 205
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 125/148 (84%), Gaps = 1/148 (0%)
Query: 11 DYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD L KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFET 158
D+ +K+ V + + AD GI F ET
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLET 153
>sp|P62820|RAB1A_HUMAN Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3
Length = 205
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 125/148 (84%), Gaps = 1/148 (0%)
Query: 11 DYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD L KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFET 158
D+ +K+ V + + AD GI F ET
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLET 153
>sp|P62822|RAB1A_CANFA Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3
Length = 205
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 125/148 (84%), Gaps = 1/148 (0%)
Query: 11 DYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD L KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFET 158
D+ +K+ V + + AD GI F ET
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLET 153
>sp|P22125|RAB1_DIPOM Ras-related protein ORAB-1 OS=Diplobatis ommata PE=2 SV=1
Length = 202
Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 125/148 (84%), Gaps = 1/148 (0%)
Query: 11 DYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD L KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFET 158
D+ +K+ V + + AD GI F ET
Sbjct: 124 DL-TTKKVVDYTTAKEFADSLGIPFLET 150
>sp|Q52NJ2|RAB1A_PIG Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3
Length = 205
Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 125/148 (84%), Gaps = 1/148 (0%)
Query: 11 DYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD L KLLLIGDSGVGKSCLLLRF+D ++T S+I+TIG+DFKIRTIELDGK IKLQIWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKA 130
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++AS+NVNK+LVGNK
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKC 126
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFET 158
D+ +K+ V + + AD GI F ET
Sbjct: 127 DL-TTKKVVDYTTAKEFADSLGIPFLET 153
>sp|Q5KTJ6|RAB13_MESAU Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2
SV=1
Length = 203
Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 97/147 (65%), Positives = 127/147 (86%), Gaps = 1/147 (0%)
Query: 12 YDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD L KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDFKIRT+E++GKRIKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFET 158
M E+KR V + LA E+GI+FFET
Sbjct: 125 M-EAKRKVLKEQADKLAREHGIRFFET 150
>sp|P35286|RAB13_RAT Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2
Length = 203
Score = 213 bits (541), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 96/153 (62%), Positives = 130/153 (84%), Gaps = 1/153 (0%)
Query: 12 YDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD L KLLLIGDSGVGK+CL++RF++ +F +++I+TIGIDFKIRT+E++GKRIKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETVMQRQI 164
M E+KR V + + LA E+ I+FFET + +
Sbjct: 125 M-EAKRKVQREQAERLAREHRIRFFETSAKSSV 156
>sp|Q9SEH3|RAD2C_ARATH Ras-related protein RABD2c OS=Arabidopsis thaliana GN=RABD2C PE=1
SV=1
Length = 202
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 122/148 (82%), Gaps = 1/148 (0%)
Query: 11 DYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD L KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKA 130
TAGQERFRTIT++YYRGA GI++ YDVTD SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFET 158
D+ S++ V T +A ADE GI F ET
Sbjct: 124 DL-TSQKVVSTETAKAFADELGIPFLET 150
>sp|Q9FPJ4|RAD2B_ARATH Ras-related protein RABD2b OS=Arabidopsis thaliana GN=RABD2B PE=2
SV=1
Length = 202
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 122/148 (82%), Gaps = 1/148 (0%)
Query: 11 DYDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
+YD L KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKA 130
TAGQERFRTIT++YYRGA GI++ YDVTD SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKN 123
Query: 131 DMDESKRAVPTSKGQALADEYGIKFFET 158
D+ S++ V T +A ADE GI F ET
Sbjct: 124 DL-TSQKVVSTETAKAFADELGIPFLET 150
>sp|Q9DD03|RAB13_MOUSE Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=1 SV=1
Length = 202
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 95/153 (62%), Positives = 130/153 (84%), Gaps = 1/153 (0%)
Query: 12 YDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD L KLLLIGDSGVGK+CL++RF++ +F +++I+TIGIDFKIRT++++GKRIKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFETVMQRQI 164
M E+KR V + + LA E+ I+FFET + +
Sbjct: 125 M-EAKRQVQREQAEKLAREHRIRFFETSAKSSV 156
>sp|P51153|RAB13_HUMAN Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1
Length = 203
Score = 210 bits (535), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 127/147 (86%), Gaps = 1/147 (0%)
Query: 12 YDCLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
YD L KLLLIGDSGVGK+CL++RF++ +F ++I+TIGIDFKIRT++++GK+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
Query: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
AGQERF+TITTAYYRGAMGI+LVYD+TDE SF NI+NW+++I+++AS V ++L+GNK D
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 132 MDESKRAVPTSKGQALADEYGIKFFET 158
M E+KR V + LA E+GI+FFET
Sbjct: 125 M-EAKRKVQKEQADKLAREHGIRFFET 150
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,278,965
Number of Sequences: 539616
Number of extensions: 2063882
Number of successful extensions: 11307
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 257
Number of HSP's that attempted gapping in prelim test: 9245
Number of HSP's gapped (non-prelim): 1297
length of query: 164
length of database: 191,569,459
effective HSP length: 108
effective length of query: 56
effective length of database: 133,290,931
effective search space: 7464292136
effective search space used: 7464292136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)