BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031203
(164 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XG77|PSA6_TOBAC Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2
SV=1
Length = 246
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 148/164 (90%), Positives = 156/164 (95%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
MTADARTLVQQAR EAAEFRFKYGYEMPVDVL+KWIADKSQVYTQHAYMRPLGVVAM+L
Sbjct: 83 MTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIADKSQVYTQHAYMRPLGVVAMILG 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
IDEE GP+LFKCDPAGHFFGHKATSAG KEQEAINFLEKKMKNDPAF+++ETVQTAIS L
Sbjct: 143 IDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLEKKMKNDPAFSYEETVQTAISAL 202
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 164
QSVLQEDFKASEIEVGVV KE+P FRVL+ EEIDEHLTAISERD
Sbjct: 203 QSVLQEDFKASEIEVGVVKKEDPIFRVLTTEEIDEHLTAISERD 246
>sp|O48551|PSA6_SOYBN Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2
Length = 246
Score = 310 bits (793), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 145/164 (88%), Positives = 157/164 (95%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
MTADARTLVQQAR EAAEFRF YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVL
Sbjct: 83 MTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLG 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
ID+E GP+L+KCDPAGH+FGHKATSAGLK+QEAINFLEKKMKNDP+FT++ETVQTAIS L
Sbjct: 143 IDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLEKKMKNDPSFTYEETVQTAISAL 202
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 164
QSVLQEDFKA+EIEVGVV K+NPEFRVL+ +EIDEHLTAISERD
Sbjct: 203 QSVLQEDFKATEIEVGVVRKDNPEFRVLTTDEIDEHLTAISERD 246
>sp|O81146|PSA6A_ARATH Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1
PE=1 SV=2
Length = 246
Score = 296 bits (759), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 137/164 (83%), Positives = 152/164 (92%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+TADAR+LVQQAR +AAEFRF YGYEMPVD+LAKWIADKSQVYTQHAYMRPLGVVAMV+
Sbjct: 83 ITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVAMVMG 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
+DEE GP L+KCDPAGHF+GHKATSAG+KEQEA+NFLEKKMK +P+FTF ETVQTAIS L
Sbjct: 143 VDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISAL 202
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 164
QSVLQEDFKA+EIEVGVV ENPEFR L+ EEI+EHLTAISERD
Sbjct: 203 QSVLQEDFKATEIEVGVVRAENPEFRALTTEEIEEHLTAISERD 246
>sp|O81147|PSA6B_ARATH Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana GN=PAA2
PE=1 SV=1
Length = 246
Score = 292 bits (748), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 137/164 (83%), Positives = 150/164 (91%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
MTAD+R+LVQQAR EAAEFRF+YGYEMP D+LAKWIADKSQVYTQHAYMRPLGVVAMVL
Sbjct: 83 MTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQHAYMRPLGVVAMVLG 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
IDEE GP L+KCDPAGHF+GHKATSAG+KEQEA+NFLEKKMK +PAFT+ ETVQTAIS L
Sbjct: 143 IDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPAFTYDETVQTAISAL 202
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 164
QSVLQEDFKA+EIEVGVV ++P FR L EEIDEHLTAISERD
Sbjct: 203 QSVLQEDFKATEIEVGVVRADDPLFRSLRTEEIDEHLTAISERD 246
>sp|Q9LSU3|PSA6_ORYSJ Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica
GN=PAA1 PE=2 SV=1
Length = 246
Score = 283 bits (723), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 135/164 (82%), Positives = 149/164 (90%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+TADAR+LV QAR EAAEFRFK+GYEMPVDVLAKWIADK+QVYTQHAYMRPLGVVAMVL
Sbjct: 83 LTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIADKAQVYTQHAYMRPLGVVAMVLG 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
DEE +LFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMK+DP F+++ETVQ AIS L
Sbjct: 143 YDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKDDPQFSYEETVQIAISAL 202
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 164
QSVLQEDFKA+EIEVGVV K++ FR L+ EEID+HLTAISERD
Sbjct: 203 QSVLQEDFKATEIEVGVVRKDDRVFRALTTEEIDQHLTAISERD 246
>sp|Q9QUM9|PSA6_MOUSE Proteasome subunit alpha type-6 OS=Mus musculus GN=Psma6 PE=1 SV=1
Length = 246
Score = 215 bits (548), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 135/164 (82%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
MTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD SQVYTQ+A MRPLG +++
Sbjct: 83 MTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIG 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLEKK+K +TF++TV+TAI+ L
Sbjct: 143 IDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCL 202
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 164
+VL DFK SEIEVGVV+ ENP+FR+L+ EID HL A++ERD
Sbjct: 203 STVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLVALAERD 246
>sp|P60901|PSA6_RAT Proteasome subunit alpha type-6 OS=Rattus norvegicus GN=Psma6 PE=1
SV=1
Length = 246
Score = 215 bits (548), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 135/164 (82%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
MTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD SQVYTQ+A MRPLG +++
Sbjct: 83 MTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIG 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLEKK+K +TF++TV+TAI+ L
Sbjct: 143 IDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCL 202
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 164
+VL DFK SEIEVGVV+ ENP+FR+L+ EID HL A++ERD
Sbjct: 203 STVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLVALAERD 246
>sp|P60900|PSA6_HUMAN Proteasome subunit alpha type-6 OS=Homo sapiens GN=PSMA6 PE=1 SV=1
Length = 246
Score = 215 bits (548), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 135/164 (82%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
MTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD SQVYTQ+A MRPLG +++
Sbjct: 83 MTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIG 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLEKK+K +TF++TV+TAI+ L
Sbjct: 143 IDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCL 202
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 164
+VL DFK SEIEVGVV+ ENP+FR+L+ EID HL A++ERD
Sbjct: 203 STVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLVALAERD 246
>sp|Q2YDE4|PSA6_BOVIN Proteasome subunit alpha type-6 OS=Bos taurus GN=PSMA6 PE=1 SV=1
Length = 246
Score = 215 bits (548), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 135/164 (82%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
MTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD SQVYTQ+A MRPLG +++
Sbjct: 83 MTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIG 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLEKK+K +TF++TV+TAI+ L
Sbjct: 143 IDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCL 202
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 164
+VL DFK SEIEVGVV+ ENP+FR+L+ EID HL A++ERD
Sbjct: 203 STVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLVALAERD 246
>sp|Q9XZJ4|PSA6_DROME Proteasome subunit alpha type-6 OS=Drosophila melanogaster
GN=Prosalpha1 PE=2 SV=2
Length = 244
Score = 189 bits (480), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 93/162 (57%), Positives = 120/162 (74%), Gaps = 2/162 (1%)
Query: 3 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 62
AD+R+ VQ+ARYEAA FR+KYGYEMPVDVL + IAD +QVYTQ+A MRPLG ++++ D
Sbjct: 85 ADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYD 144
Query: 63 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQS 122
E GP ++K DPAG+F G KA S G K EA ++LEKK K P + ++ +Q AIS L S
Sbjct: 145 NEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYK--PNLSEEKAIQLAISCLSS 202
Query: 123 VLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 164
VL DFK + IE+GVVSK +P FR+L EI+EHLT I+E+D
Sbjct: 203 VLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLTKIAEKD 244
>sp|O94517|PSA1_SCHPO Probable proteasome subunit alpha type-1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC646.16 PE=3 SV=1
Length = 244
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 119/164 (72%), Gaps = 4/164 (2%)
Query: 3 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID 62
ADAR V +AR EAAEF +K GY MP DVLAK +A+ +QV TQ A MRPLGV ++++D
Sbjct: 83 ADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQRAAMRPLGVAMTLVAVD 142
Query: 63 EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND--PAFTFQETVQTAISTL 120
+E GP LFK DPAG + G+KATSAG K+ E IN+LEK+ K D P+ +TV+T I L
Sbjct: 143 DEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDGIPS-NLTDTVETGIQAL 201
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 164
S L DFK++E+++GVV + P FRVLS+EEI+ HL +I+E+D
Sbjct: 202 MSSLSTDFKSTELQIGVVEDDKP-FRVLSVEEIEAHLQSIAEKD 244
>sp|Q54XM7|PSA6_DICDI Proteasome subunit alpha type-6 OS=Dictyostelium discoideum
GN=psmA6 PE=3 SV=1
Length = 250
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 121/169 (71%), Gaps = 5/169 (2%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ D+++ +A E A F K+GY++P +VLAK +AD +Q+ TQHA RPLGV +++
Sbjct: 82 IVPDSKSQASRAIQECATFHHKFGYQIPPNVLAKRMADIAQLSTQHASARPLGVAMILIG 141
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQT----- 115
ID+E GP+LFK DPAG F G+KAT+AG KEQE+ NFLEKK K++P + ET+Q
Sbjct: 142 IDDELGPQLFKVDPAGVFTGYKATAAGEKEQESTNFLEKKFKSNPQLSKDETIQVSLIVM 201
Query: 116 AISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 164
AISTLQSVL D K+S++E+G+ + +N +F +++ E+ID LT ++ERD
Sbjct: 202 AISTLQSVLGADLKSSDLEIGICTMDNRKFVIMTDEDIDSQLTKLAERD 250
>sp|P21243|PSA1_YEAST Proteasome subunit alpha type-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SCL1 PE=1 SV=1
Length = 252
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 115/166 (69%), Gaps = 7/166 (4%)
Query: 4 DARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDE 63
DAR +A+ EAAEFR+KYGY+MP DVLAK +A+ SQ+YTQ AYMRPLGV+ +S+DE
Sbjct: 89 DARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQRAYMRPLGVILTFVSVDE 148
Query: 64 ECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE---KKMKNDPAF--TFQETVQTAIS 118
E GP ++K DPAG++ G+KAT+ G K+QE LE KK K D ++++ V+ AI+
Sbjct: 149 ELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFKKSKIDHINEESWEKVVEFAIT 208
Query: 119 TLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 164
+ L +F +++EVGV +K+ +F LS E I+E L AI+E+D
Sbjct: 209 HMIDALGTEFSKNDLEVGVATKD--KFFTLSAENIEERLVAIAEQD 252
>sp|O17586|PSA6_CAEEL Proteasome subunit alpha type-6 OS=Caenorhabditis elegans GN=pas-1
PE=1 SV=1
Length = 246
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 110/164 (67%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
M DA+ +++A+ EAA +++K GY+MP ++LAK +AD +Q YTQ+A MR LG + +S
Sbjct: 83 MIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFIS 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
D+E GP +++ DPAG++ G K S G+K+ A +FLEKK+K T E ++ AI L
Sbjct: 143 YDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTEAIELAIEAL 202
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 164
Q+ L D ++ ++EV VV+K+N +F L+ ++++ HL I+ RD
Sbjct: 203 QTSLGIDVRSKDLEVVVVTKDNSKFTKLTSDQVEHHLNQIANRD 246
>sp|Q8TYB7|PSA_METKA Proteasome subunit alpha OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=psmA PE=3 SV=1
Length = 246
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 93/155 (60%), Gaps = 5/155 (3%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ ADAR LV++AR EA +R+ YG + VDVL K I D QVYTQH +RP G ++
Sbjct: 83 LVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQHGGVRPFGTALLIAG 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
+D + G RLF+ DP+G HKAT+ G QEA++ E++ + D T QE ++ A+ L
Sbjct: 143 VDTK-GCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYRED--MTLQEAIELAVRAL 199
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDE 155
+E+ A +E+ VV K+ FR L ++I+E
Sbjct: 200 YEASREETTADNLEIAVVDKQG--FRKLERKKIEE 232
>sp|Q9GU37|PSA1_TRYBB Proteasome subunit alpha type-1 OS=Trypanosoma brucei brucei PE=2
SV=1
Length = 266
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 98/166 (59%), Gaps = 8/166 (4%)
Query: 4 DARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSI-- 61
D + LVQ+AR EA+E++++YG M V VLAK D +QV TQ A MR +G + + +
Sbjct: 83 DGKALVQKARNEASEYKYRYGMPMLVSVLAKPWQDMAQVRTQQAGMRLMGTIMTFVGMEQ 142
Query: 62 DEECG---PRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTF--QETVQTA 116
++E G P+++ DPAG H A + G K+ EA FLEKK KN P T +E A
Sbjct: 143 NDEDGAWIPQIYCVDPAGGAAVH-ACAVGKKQIEACAFLEKKQKNAPFHTLSQKEAAMIA 201
Query: 117 ISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISE 162
++ LQS L E +AS +EVG + ++ F +S E+ + LT +++
Sbjct: 202 LAALQSALGESLRASGVEVGRCTADDHHFLRVSDREVKKWLTPLAK 247
>sp|Q60177|PSA_METJA Proteasome subunit alpha OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=psmA PE=1 SV=1
Length = 261
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ ADAR L+ +AR EA +R YG E+ +++LAK I D Q YTQH +RP GV ++
Sbjct: 82 LVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQHGGVRPFGVSLLIAG 141
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
ID+ RLF+ DP+G +KAT+ G + LEK+ ++D T E ++ AI+ L
Sbjct: 142 IDKN-EARLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDD--ITLDEGLELAITAL 198
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEE 152
ED K ++V +++ ++ +F+ + +EE
Sbjct: 199 TKA-NEDIKPENVDVCIITVKDAQFKKIPVEE 229
>sp|O59219|PSA_PYRHO Proteasome subunit alpha OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=psmA PE=3 SV=1
Length = 260
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 92/158 (58%), Gaps = 5/158 (3%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ ADAR LV +AR EA R YG P+ V+ K I D Q++TQ+ +RP G ++
Sbjct: 83 IIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAG 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
++E+ P L++ DP+G +F KA + G A+ E+K K+D + +E ++ AI L
Sbjct: 143 VNEK--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDD--MSLEEAIKLAIFAL 198
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 158
+++ A IEV +++ ++ +FR LS EEI+++L
Sbjct: 199 AKTMEKP-SAENIEVAIITVKDKKFRKLSREEIEKYLN 235
>sp|Q8U0L6|PSA_PYRFU Proteasome subunit alpha OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=psmA PE=3 SV=1
Length = 260
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 92/158 (58%), Gaps = 5/158 (3%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ ADAR LV +AR EA +R YG PV V+ K I D Q++TQ+ +RP G ++
Sbjct: 83 IIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYGGVRPFGAALLMAG 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
I++ P L++ DP+G +F KA + G A+ E+K ++D ++ ++ A+ L
Sbjct: 143 INDR--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRDD--MNLEDAIKLALMAL 198
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 158
+ E+ A IEV V++ ++ +FR L+ +EI+++L+
Sbjct: 199 AKTM-ENPSADNIEVAVITVKDKKFRKLTRDEIEKYLS 235
>sp|Q469M6|PSA_METBF Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=psmA PE=3 SV=1
Length = 249
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 3/163 (1%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ ADAR+LV +AR EA R Y + V+V++K I D Q YTQ+ +RP G ++
Sbjct: 82 LVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAG 141
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
+D+ PRLF+ DP+G +KAT+ G + E + + D + + L
Sbjct: 142 VDDNL-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEAEYRQD--MNMDAAILLGMDAL 198
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 163
+ F AS +EVG+VS ++ +FR L EE++ ++ I E+
Sbjct: 199 YRAAEGKFDASTLEVGIVSLQDKKFRKLVPEEVENYVQQILEK 241
>sp|Q8TPX5|PSA_METAC Proteasome subunit alpha OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=psmA PE=3 SV=1
Length = 247
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 3/163 (1%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ ADAR+LV +AR EA R Y + V+V++K I D Q YTQ+ +RP G ++
Sbjct: 80 LVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAG 139
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
+D+ PRLF+ DP+G +KAT+ G + E + D + + L
Sbjct: 140 VDDNK-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYRED--MNMDAAILLGMDAL 196
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 163
+ F A +EVGVVS E+ +FR L EE++ ++ I E+
Sbjct: 197 YKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVQQILEK 239
>sp|Q8PTU1|PSA_METMA Proteasome subunit alpha OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=psmA PE=3 SV=1
Length = 249
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 3/163 (1%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ ADAR+LV +AR EA R Y + V+V++K I D Q YTQ+ +RP G ++
Sbjct: 82 LVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAG 141
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
+D+ PRLF+ DP+G +KAT+ G + E + D + + L
Sbjct: 142 VDDNK-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYRED--MNIDAAILLGMDAL 198
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 163
+ F A +EVGVVS E+ +FR L EE++ ++ I E+
Sbjct: 199 YKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVHQILEK 241
>sp|Q59565|PSA_METTE Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3
SV=1
Length = 247
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 3/163 (1%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ ADAR LV +AR EA R Y + V+V++K I D Q YTQ+ +RP G ++
Sbjct: 80 LVADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAG 139
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
+D++ PRLF+ DP+G +KAT+ G + E K D + + + L
Sbjct: 140 VDDKR-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYKED--MNIEAAILLGMDAL 196
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 163
+ F A +EVGVVS ++ +FR L EE+ ++ I E+
Sbjct: 197 YKAAEGKFDAGTLEVGVVSLQDKKFRKLEPEEVGNYVQQILEK 239
>sp|C6A459|PSA_THESM Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 /
DSM 12597) GN=psmA PE=3 SV=1
Length = 260
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 92/157 (58%), Gaps = 5/157 (3%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ ADAR LV +AR EA +R YG +P+ VL K I D Q++TQ+ +RP G ++
Sbjct: 83 IIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYGGVRPFGAALLMAG 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
++E+ P LF+ DP+G +F KA + G A+ E+K +++ T +E ++ A+ L
Sbjct: 143 VNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRDE--MTLEEAIKLAVLAL 198
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 157
+++E S IEV V+S + +F+ ++ EE+ + L
Sbjct: 199 SKIMEEPSPES-IEVAVISVKEKKFKKITPEEVAKCL 234
>sp|Q9V122|PSA_PYRAB Proteasome subunit alpha OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=psmA PE=3 SV=1
Length = 260
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 89/157 (56%), Gaps = 5/157 (3%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ ADAR LV +AR EA R YG P+ V+ K I D Q++TQ+ +RP G ++
Sbjct: 83 IIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAG 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
++++ P L++ DP+G +F KA + G A+ E K ++D T E ++ AI L
Sbjct: 143 VNDK--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDD--MTLDEAIKLAIFAL 198
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 157
+++ A IEV V++ ++ +FR LS EEI++ L
Sbjct: 199 AKTMEKP-SAENIEVAVITVKDKKFRKLSKEEIEKFL 234
>sp|Q94561|PSA5_ENTHI Proteasome subunit alpha type-5 OS=Entamoeba histolytica PE=3 SV=2
Length = 247
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHA-----YMRPLGVV 55
+TADARTL+ AR EA RF Y + V+V+A+ I+D S + + + RP GV
Sbjct: 81 LTADARTLIDNARLEAQNHRFMYDEPINVEVVAQAISDLSLRFGEGSRKKKVMSRPFGVA 140
Query: 56 AMVLSIDEECGPRLFKCDPAGHF--FGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETV 113
++ +D E GPRLF+ DP+G F F KAT AG + ++I L +K + + T +E
Sbjct: 141 LLIAGVD-ETGPRLFQTDPSGMFIEFYAKATGAGTEAAQSI--LHEKY--NKSMTLREAE 195
Query: 114 QTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISE 162
A+STL+ V++E + +EV +V+ E +F ++ I+ + I E
Sbjct: 196 ILALSTLKQVMEEKLNSKNVEVALVTVEKKKFEIMDTAFIENLIGEIKE 244
>sp|P48004|PSA7_RAT Proteasome subunit alpha type-7 OS=Rattus norvegicus GN=Psma7 PE=1
SV=1
Length = 254
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 86/157 (54%), Gaps = 3/157 (1%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+TADAR ++ +AR E R G + V+ + ++IA Q YTQ RP G+ A+++
Sbjct: 82 LTADARIVINRARVECQSHRLTVGDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVG 141
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
D + PRL++ DP+G + KA + G + FLEK +D T T++ I L
Sbjct: 142 FDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKAL 201
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 157
V+Q K IE+ V+ ++ P ++LS EEI++++
Sbjct: 202 LEVVQSGGK--NIELAVMRRDQP-LKILSPEEIEKYV 235
>sp|Q97BZ8|PSA_THEVO Proteasome subunit alpha OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=psmA
PE=3 SV=2
Length = 233
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 90/160 (56%), Gaps = 10/160 (6%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ ADAR L+ AR A + + YG + ++ L K +AD+ Q YTQ+ +RP GV +
Sbjct: 81 LVADARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAG 140
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
ID + GPRLF CDPAG +KAT+ G + ++FLEK+ K + +E V I L
Sbjct: 141 ID-QIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEKEYKE--GLSEKEAVTLGIKAL 197
Query: 121 QSVLQ--EDFKASEI-EVGVVSKENPEFRVLSIEEIDEHL 157
++ L+ E+ KA EI + V SK +R+ EE+ + L
Sbjct: 198 KASLEEGEELKAPEIASITVGSK----YRIYGAEEVKKFL 233
>sp|P25156|PSA_THEAC Proteasome subunit alpha OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=psmA PE=1 SV=2
Length = 233
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 88/157 (56%), Gaps = 4/157 (2%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ ADAR LV AR A + + YG + ++ L K +AD+ Q YTQ+ +RP GV +
Sbjct: 81 LVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAG 140
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
ID + GPRLF CDPAG +KAT+ G + ++FLE++ K + +E V I L
Sbjct: 141 ID-QIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKEN--LPEKEAVTLGIKAL 197
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 157
+S L+E + E+ ++ N ++R+ EE+ + L
Sbjct: 198 KSSLEEGEELKAPEIASITVGN-KYRIYDQEEVKKFL 233
>sp|A4FZT6|PSA_METM5 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=psmA PE=3 SV=1
Length = 259
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ ADAR L+ +AR EA R YG + V+ LAK I D Q YTQH RP G+ ++
Sbjct: 83 LVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITG 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
ID RLF+ DP+G +KAT+ G A+ LE K D T E ++ A+ L
Sbjct: 143 IDRHSA-RLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSED--MTVNEGMELALYAL 199
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 160
S E+ K I++ +V +S++EI++ + A+
Sbjct: 200 -SKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIVKAV 238
>sp|Q9N599|PSA4_CAEEL Proteasome subunit alpha type-4 OS=Caenorhabditis elegans GN=pas-3
PE=3 SV=2
Length = 250
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 86/156 (55%), Gaps = 5/156 (3%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+TADA L+ R+ AA +R YG EMPV+ L + + ++ Q YTQ RP GV + +
Sbjct: 79 ITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVSLLYIG 138
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
D+ G +L++ DP+G++ G KAT G Q A+ L+++ K+ +E Q AI L
Sbjct: 139 WDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEYKSP---NLEEAKQLAIKVL 195
Query: 121 QSVLQEDFKASEIEVGVVSKENPE--FRVLSIEEID 154
L + ++E+ V+++ + + L+ +E+D
Sbjct: 196 WKTLDVKLASEKVEMAVLTRRDGKTVLEELTTKEVD 231
>sp|A6VIP0|PSA_METM7 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=psmA PE=3 SV=1
Length = 259
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 4/163 (2%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ ADAR L+ +AR EA R YG + V+ LAK I D Q YTQH RP G+ ++
Sbjct: 83 LVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITG 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
ID RLF+ DP+G +KAT+ G A+ LE K D T E ++ A+ L
Sbjct: 143 IDRHSA-RLFETDPSGALIEYKATAIGSGRPIAMEVLESKY--DENMTVNEGMELALYAL 199
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 163
S E+ K I++ +V +S++EI++ + A+ ++
Sbjct: 200 -SKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIVKAVYKK 241
>sp|A4YCU9|PSA_METS5 Proteasome subunit alpha OS=Metallosphaera sedula (strain ATCC
51363 / DSM 5348) GN=psmA PE=3 SV=1
Length = 240
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 87/162 (53%), Gaps = 6/162 (3%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ +D R L+ AR + + R Y + +D L K I+D Q+YTQH +RP GV +V
Sbjct: 83 LASDGRILIDYARNSSLQHRLVYDEPISIDYLTKLISDVKQMYTQHGGVRPFGVALIVGG 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
+D +LF +P+G F ++A + G A ++LEK K D + +ET+ A++ L
Sbjct: 143 VDRGV-TKLFMTEPSGQFMPYQAVAIGQGGYNATDYLEKNYKED--LSVEETILLALNAL 199
Query: 121 QSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 160
+ L+ E +E+G +KE +FR +++EE +L I
Sbjct: 200 KVTLKPGEKLGPGNVEIGFATKEG-QFRKMTLEERANYLQKI 240
>sp|Q975G5|PSA_SULTO Proteasome subunit alpha OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=psmA PE=3 SV=2
Length = 242
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ +D R L+ AR +A + R Y + +D L K ++D Q+YTQH +RP GV ++
Sbjct: 83 LASDGRILIDYARSQALQHRLIYDEPINIDYLTKLVSDVKQMYTQHGGVRPFGVALIIGG 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
ID P+L +P+G F + A + G A + EK + D Q+T+ I L
Sbjct: 143 IDRGKTPKLLMTEPSGQFMPYYAVAIGQGGYTATEYFEKNYRED--LNMQDTILLGIRAL 200
Query: 121 QSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEE 152
S L+ E S IEVG ++ FR +S EE
Sbjct: 201 ASTLKPGEKLAPSNIEVGFADVDSGMFRKMSFEE 234
>sp|O29760|PSA_ARCFU Proteasome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=psmA PE=1 SV=1
Length = 246
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 4/163 (2%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ ADAR L+ +AR EA R Y + V LAK I D Q YTQ+ +RP GV ++
Sbjct: 81 LVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAG 140
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
+DE P+L++ DP+G +KAT+ G+ F EK+ ++D +F + + + +
Sbjct: 141 VDEV--PKLYETDPSGALLEYKATAIGMGRNAVTEFFEKEYRDD--LSFDDAMVLGLVAM 196
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 163
++ + IEVG V ++ F+ +S EE+ ++ +ER
Sbjct: 197 GLSIESELVPENIEVGYVKVDDRTFKEVSPEELKPYVERANER 239
>sp|Q54DM7|PSA2_DICDI Proteasome subunit alpha type-2 OS=Dictyostelium discoideum
GN=psmA2 PE=3 SV=1
Length = 232
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 91/157 (57%), Gaps = 4/157 (2%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
M D+R L+++AR E+ ++ +Y ++PV L + +A Q +TQ +RP GV +V
Sbjct: 77 MGPDSRVLIKKARKESEKYYKQYKEKIPVLQLVRELASIMQEFTQSGGVRPFGVSLLVAG 136
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
DE+ GP L++ DP+G +F KAT+ G + FLEK+ +D ++ +QTA+ T+
Sbjct: 137 FDEK-GPHLYQVDPSGSYFAWKATAIGKNMVSSKTFLEKRYSDD--LEIEDAIQTALITI 193
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 157
+ + +E+ ++ K N EF++L+ +I ++L
Sbjct: 194 KEGFETQLTEFNMELAIIGK-NQEFKILTPAQIKDYL 229
>sp|Q6M0L9|PSA_METMP Proteasome subunit alpha OS=Methanococcus maripaludis (strain S2 /
LL) GN=psmA PE=3 SV=1
Length = 259
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ ADAR L+ +AR EA R YG + V+ LAK I D Q YTQH RP G+ ++
Sbjct: 83 LVADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITG 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
ID RLF+ DP+G +KAT+ G A+ LE K D T E ++ A+ L
Sbjct: 143 IDRHSA-RLFETDPSGALIEYKATAIGSGRPIAMEVLESKY--DENMTVSEGMELALYAL 199
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 160
S E+ K I++ ++ +S++EI++ + A+
Sbjct: 200 -SKTTEELKPENIDMAIIKDSGKLVEKISVDEIEKIVKAV 238
>sp|Q27488|PSA2_CAEEL Proteasome subunit alpha type-2 OS=Caenorhabditis elegans GN=pas-2
PE=1 SV=1
Length = 231
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 81/161 (50%), Gaps = 5/161 (3%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
M D R LV++AR A E+ YG EMP L IA Q YTQ +RP G ++
Sbjct: 75 MGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSGGVRPFGASLLIAG 134
Query: 61 IDEECG-PRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAIST 119
D+ G P LF+CDP+G +F KAT+ G + A FLEK+ A + + TA+ T
Sbjct: 135 WDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRFSE--ALELDDGIHTALLT 192
Query: 120 LQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 160
L+ + +EV V + F L+ +++ +HL +
Sbjct: 193 LRESFDVGMNENNVEVAVCNSTG--FHRLTKQQVHDHLGTL 231
>sp|Q10KF0|PSA2_ORYSJ Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica
GN=PAB1 PE=2 SV=1
Length = 235
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 86/157 (54%), Gaps = 4/157 (2%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
M D R LV+++R +A ++ Y +PV L + A Q +TQ +RP GV ++
Sbjct: 79 MGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAG 138
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
D+ GP+L++ DP+G +F KA++ G A FLEK+ D + + TAI TL
Sbjct: 139 YDDN-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTED--MELDDAIHTAILTL 195
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 157
+ + A+ IE+G++ + + EF+VLS EI + L
Sbjct: 196 KEGYEGQISANNIEIGII-RSDREFKVLSPAEIKDFL 231
>sp|A2YVR7|PSA2_ORYSI Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica
GN=PAB1 PE=2 SV=2
Length = 235
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 86/157 (54%), Gaps = 4/157 (2%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
M D R LV+++R +A ++ Y +PV L + A Q +TQ +RP GV ++
Sbjct: 79 MGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAG 138
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
D+ GP+L++ DP+G +F KA++ G A FLEK+ D + + TAI TL
Sbjct: 139 YDDN-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTED--MELDDAIHTAILTL 195
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 157
+ + A+ IE+G++ + + EF+VLS EI + L
Sbjct: 196 KEGYEGQISANNIEIGII-RSDREFKVLSPAEIKDFL 231
>sp|Q8L4A7|PSA2B_ARATH Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2
PE=1 SV=1
Length = 235
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
M D R LV+++R +A ++ Y +PV L + A Q +TQ +RP GV +V
Sbjct: 79 MGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAG 138
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
D++ GP+L++ DP+G +F KA++ G A FLEK+ D + + TAI TL
Sbjct: 139 YDDK-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTED--MELDDAIHTAILTL 195
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 160
+ + + + IE+G + + FRVL+ EID++L +
Sbjct: 196 KEGFEGEISSKNIEIGKIGTDK-VFRVLTPAEIDDYLAEV 234
>sp|A9A846|PSA_METM6 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=psmA PE=3 SV=1
Length = 259
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ ADAR L+ +AR EA R YG + V+ LAK I D Q YTQH RP G+ ++
Sbjct: 83 LVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITG 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
ID RLF+ DP+G +KAT+ G A+ LE K D E ++ A+ L
Sbjct: 143 IDRHSA-RLFETDPSGALIEYKATAIGSGRPIAMEVLESKY--DENMIVSEGMELALYAL 199
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 163
S E+ K I++ +V +S++EI++ + A+ ++
Sbjct: 200 -SKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIVKAVYKK 241
>sp|O24733|PSA_THEK1 Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA
PE=3 SV=1
Length = 260
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 5/160 (3%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ ADAR LV +AR EA +R YG +P+ VL K I D Q +TQ+ +RP G ++
Sbjct: 83 IIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAG 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
++E+ P LF+ DP+G +F KA + G A+ E+ ++D + ++ AI L
Sbjct: 143 VNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDD--IGKDDAIKLAILAL 198
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 160
L+E A IEV ++ + ++ L EE++++L I
Sbjct: 199 AKTLEEP-TAEGIEVAYITMDEKRWKKLPREELEKYLNEI 237
>sp|O23708|PSA2A_ARATH Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1
PE=1 SV=1
Length = 235
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
M D R LV+++R +A ++ Y +PV L + A Q +TQ +RP GV +V
Sbjct: 79 MGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAG 138
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
D++ GP+L++ DP+G +F KA++ G A FLEK+ D + + TAI TL
Sbjct: 139 YDDK-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTED--MELDDAIHTAILTL 195
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 160
+ + + + IE+G + + FRVL+ EID++L +
Sbjct: 196 KEGFEGEISSKNIEIGKIGADK-VFRVLTPAEIDDYLAEV 234
>sp|Q6L0W3|PSA_PICTO Proteasome subunit alpha OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=psmA
PE=3 SV=1
Length = 234
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 84/158 (53%), Gaps = 4/158 (2%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ ADAR L+ AR + + YG M ++ L K +AD+ Q YTQ+ +RP GV +
Sbjct: 81 LVADARVLIDFARISDQQEKVTYGSLMNIENLVKRVADQMQQYTQYGGVRPYGVSIIFAG 140
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
+D GPRLF CDPAG +K S G + + +LEK+ K + + E ++ I+ L
Sbjct: 141 LD-SIGPRLFDCDPAGTINEYKCVSIGAGKDQVTAYLEKEYKEN--LSEDEAIRMGIAAL 197
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 158
+S + ++ E E+ + K F V + EE+ ++L
Sbjct: 198 KSAVADESSMKEPEIASI-KMGETFHVFTSEEVSKYLN 234
>sp|Q4JB24|PSA_SULAC Proteasome subunit alpha OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=psmA PE=3 SV=1
Length = 242
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 4/162 (2%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ +D R L+ AR +A + R Y + ++ L K I+D Q YTQH +RP GV +V
Sbjct: 83 LASDGRILIDYARSQALQHRLIYDEPISIEYLTKVISDVKQAYTQHGGVRPFGVALIVGG 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
ID+ P+L +P+G F + A + G A +LEK K D Q T+ A+ L
Sbjct: 143 IDKGKQPKLLMTEPSGQFMPYYAVAIGQGGYTATEYLEKNYKED--LDIQSTILLALRAL 200
Query: 121 QSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 160
+ L+ E S +E+G ++ F+ L+ EE + L I
Sbjct: 201 MATLKPGEKLNYSSVEIGYADVDSGTFKKLTTEERSDLLQKI 242
>sp|Q9Z2U0|PSA7_MOUSE Proteasome subunit alpha type-7 OS=Mus musculus GN=Psma7 PE=1 SV=1
Length = 248
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 85/157 (54%), Gaps = 3/157 (1%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+TADAR ++ +AR E R + V+ + ++IA Q YTQ RP G+ A+++
Sbjct: 76 LTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVG 135
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
D + PRL++ DP+G + KA + G + FLEK +D T T++ I L
Sbjct: 136 FDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKAL 195
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 157
V+Q K IE+ V+ ++ P ++L+ EEI++++
Sbjct: 196 LEVVQSGGK--NIELAVMRRDQP-LKILNPEEIEKYV 229
>sp|Q5RDH8|PSA7_PONAB Proteasome subunit alpha type-7 OS=Pongo abelii GN=PSMA7 PE=2 SV=2
Length = 248
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 85/157 (54%), Gaps = 3/157 (1%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+TADAR ++ +AR E R + V+ + ++IA Q YTQ RP G+ A+++
Sbjct: 76 LTADARIVINRARVECQSHRLTVEDSVTVEYITRYIASLKQRYTQSNGRRPFGISALIVG 135
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
D + PRL++ DP+G + KA + G + FLEK ++ T T++ I L
Sbjct: 136 FDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 195
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 157
V+Q K IE+ V+ ++ P ++L+ EEI+E++
Sbjct: 196 LEVVQSGGK--NIELAVMRRDQP-LKILNPEEIEEYV 229
>sp|Q5JIU9|PSA_PYRKO Proteasome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=psmA PE=3 SV=1
Length = 260
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 87/160 (54%), Gaps = 5/160 (3%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
+ ADAR LV +AR EA +R YG +P+ VL K I D Q +TQ+ +RP G ++
Sbjct: 83 IIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAG 142
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
++E+ P LF+ DP+G +F KA + G A+ E+ ++D + ++ AI L
Sbjct: 143 VNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDD--IGKDDAIKLAILAL 198
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 160
L+E A IEV ++ + ++ L EE+++++ I
Sbjct: 199 AKTLEEP-TAEGIEVAYITMDEKRWKKLPREELEKYINEI 237
>sp|O73672|PSA2_CARAU Proteasome subunit alpha type-2 OS=Carassius auratus GN=psma2 PE=2
SV=3
Length = 234
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
Query: 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLS 60
M D R LV++AR A ++ Y +P L + +A Q YTQ +RP GV ++
Sbjct: 79 MGPDYRVLVRRARKLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAG 138
Query: 61 IDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120
DE+ P LF+ DP+G +F KAT+ G FLEK+ D ++ + TAI TL
Sbjct: 139 WDEDR-PYLFQSDPSGAYFAWKATAMGKSYVNGKTFLEKRYNED--LELEDAIHTAILTL 195
Query: 121 QSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAIS 161
+ + IEVG+ ++ FR LS E+ ++L AI+
Sbjct: 196 KESFEGQMTEENIEVGICNEAG--FRRLSPAEVKDYLAAIA 234
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,818,243
Number of Sequences: 539616
Number of extensions: 2035751
Number of successful extensions: 6263
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 5922
Number of HSP's gapped (non-prelim): 234
length of query: 164
length of database: 191,569,459
effective HSP length: 108
effective length of query: 56
effective length of database: 133,290,931
effective search space: 7464292136
effective search space used: 7464292136
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)