Query 031203
Match_columns 164
No_of_seqs 106 out of 1076
Neff 8.3
Searched_HMMs 13730
Date Mon Mar 25 17:04:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031203.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031203hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1irua_ d.153.1.4 (A:) Proteas 100.0 1.1E-42 8.1E-47 268.7 21.0 163 1-163 82-244 (244)
2 d1rypa_ d.153.1.4 (A:) Proteas 100.0 3.2E-40 2.3E-44 254.6 21.1 162 1-164 77-243 (243)
3 d1iruc_ d.153.1.4 (C:) Proteas 100.0 3.3E-40 2.4E-44 255.5 20.3 163 1-164 78-243 (250)
4 d1j2pa_ d.153.1.4 (A:) Proteas 100.0 2.1E-39 1.5E-43 250.1 20.4 159 1-163 78-236 (243)
5 d1iruf_ d.153.1.4 (F:) Proteas 100.0 4.5E-40 3.3E-44 253.1 16.3 161 1-163 74-236 (238)
6 d1rypf_ d.153.1.4 (F:) Proteas 100.0 6.1E-40 4.5E-44 251.7 15.3 155 1-157 76-233 (233)
7 d1irue_ d.153.1.4 (E:) Proteas 100.0 1.4E-39 1E-43 249.7 17.1 156 1-160 74-234 (234)
8 d1rype_ d.153.1.4 (E:) Proteas 100.0 2.4E-39 1.7E-43 249.5 18.0 161 1-164 73-239 (242)
9 d1yara1 d.153.1.4 (A:13-233) P 100.0 3.4E-39 2.5E-43 245.6 18.4 153 1-157 69-221 (221)
10 d1irug_ d.153.1.4 (G:) Proteas 100.0 4.5E-39 3.3E-43 248.5 16.6 159 1-161 80-239 (245)
11 d1rypb_ d.153.1.4 (B:) Proteas 100.0 2.1E-38 1.5E-42 245.3 19.5 158 1-160 78-250 (250)
12 d1rypd_ d.153.1.4 (D:) Proteas 100.0 3.6E-38 2.6E-42 242.8 20.6 160 1-163 76-237 (241)
13 d1irud_ d.153.1.4 (D:) Proteas 100.0 1.3E-38 9.6E-43 245.6 18.1 160 1-163 75-234 (243)
14 d1rypc_ d.153.1.4 (C:) Proteas 100.0 3.2E-37 2.3E-41 237.9 21.1 158 1-160 79-241 (244)
15 d1rypg_ d.153.1.4 (G:) Proteas 100.0 3.6E-36 2.6E-40 232.0 21.4 161 1-162 77-241 (244)
16 d1irub_ d.153.1.4 (B:) Proteas 100.0 2.8E-36 2.1E-40 230.7 19.9 155 1-160 78-232 (233)
17 d1yarh1 d.153.1.4 (H:1-203) Pr 100.0 1.6E-35 1.2E-39 222.2 20.6 152 1-161 48-200 (203)
18 d1irul_ d.153.1.4 (L:) Proteas 100.0 5.3E-35 3.8E-39 219.2 17.4 152 1-161 48-200 (201)
19 d1rypk_ d.153.1.4 (K:) Proteas 100.0 4.2E-35 3E-39 219.3 15.2 147 1-153 49-197 (198)
20 d1j2qh_ d.153.1.4 (H:) Proteas 100.0 2.3E-34 1.7E-38 215.3 19.3 152 1-161 48-201 (202)
21 d1ryph_ d.153.1.4 (H:) Proteas 100.0 7.8E-35 5.7E-39 219.1 15.3 146 2-155 58-204 (205)
22 d1rypl_ d.153.1.4 (L:) Proteas 100.0 2.6E-34 1.9E-38 217.1 17.2 155 1-163 48-203 (212)
23 d1q5qa_ d.153.1.4 (A:) Proteas 100.0 3.3E-34 2.4E-38 218.9 16.3 155 1-158 59-225 (227)
24 d1iruh_ d.153.1.4 (H:) Proteas 100.0 4.7E-34 3.4E-38 214.1 14.6 150 1-157 48-198 (202)
25 d1ryp2_ d.153.1.4 (2:) Proteas 100.0 1.4E-33 9.9E-38 215.8 9.3 152 2-156 57-217 (233)
26 d1irui_ d.153.1.4 (I:) Proteas 100.0 5.4E-32 3.9E-36 205.3 15.0 142 2-153 49-191 (220)
27 d1q5qh_ d.153.1.4 (H:) Proteas 100.0 6.8E-31 4.9E-35 199.2 19.7 157 1-162 48-219 (224)
28 d1rypi_ d.153.1.4 (I:) Proteas 100.0 3.3E-31 2.4E-35 201.4 17.5 140 1-149 48-188 (222)
29 d1iru2_ d.153.1.4 (2:) Proteas 100.0 1.2E-31 8.6E-36 203.0 13.1 147 2-153 57-205 (217)
30 d1rypj_ d.153.1.4 (J:) Proteas 100.0 4.6E-30 3.4E-34 192.1 19.0 137 1-143 55-194 (204)
31 d1ryp1_ d.153.1.4 (1:) Proteas 100.0 1.2E-29 8.5E-34 192.3 17.9 139 1-143 57-212 (222)
32 d1iruj_ d.153.1.4 (J:) Proteas 100.0 2.6E-29 1.9E-33 188.4 18.5 142 1-148 55-199 (204)
33 d1iruk_ d.153.1.4 (K:) Proteas 100.0 8.3E-29 6E-33 183.1 17.3 145 1-151 49-194 (199)
34 d1iru1_ d.153.1.4 (1:) Proteas 100.0 4.7E-27 3.5E-31 175.9 18.5 138 2-143 58-203 (213)
35 d2z3ba1 d.153.1.4 (A:1-180) Hs 99.4 2.3E-14 1.7E-18 103.9 2.2 122 3-138 57-179 (180)
36 d1m4ya_ d.153.1.4 (A:) HslV (C 99.2 5.8E-12 4.2E-16 90.0 6.4 80 53-137 90-170 (171)
37 d1g3ka_ d.153.1.4 (A:) HslV (C 99.2 6.4E-11 4.7E-15 84.6 8.7 80 55-138 92-172 (173)
38 d1cuka1 a.5.1.1 (A:156-203) DN 85.3 0.34 2.5E-05 26.0 2.7 34 85-120 14-47 (48)
39 d1l0oc_ a.4.13.2 (C:) SigmaF { 76.5 3.2 0.00023 22.6 5.0 33 5-37 10-42 (57)
40 d2hc5a1 d.352.1.1 (A:1-109) Hy 70.8 5.9 0.00043 24.5 5.8 33 130-162 66-99 (109)
41 d1rp3a1 a.4.13.1 (A:87-163) Si 65.3 7.7 0.00056 22.0 5.2 40 5-44 5-44 (77)
42 d1wwxa1 a.4.5.21 (A:8-101) E74 64.4 5.5 0.0004 24.1 4.4 25 135-159 22-46 (94)
43 d1yo5c1 a.4.5.21 (C:247-334) S 63.1 5.4 0.00039 23.9 4.1 25 135-159 23-47 (88)
44 d1duxc_ a.4.5.21 (C:) Elk-1 {H 61.9 3.5 0.00026 24.6 3.1 25 135-159 20-44 (86)
45 d1wmha_ d.15.2.2 (A:) Protein 53.8 18 0.0013 21.1 5.5 53 104-161 18-70 (83)
46 d1ku2a1 a.4.13.1 (A:273-332) S 40.6 24 0.0018 19.0 5.4 31 6-36 8-38 (60)
47 d1vi9a_ c.72.1.5 (A:) Pyridoxa 36.8 16 0.0012 26.0 3.9 39 85-126 219-257 (288)
48 d2abqa1 c.72.1.1 (A:1-306) Fru 35.2 37 0.0027 23.4 5.7 58 83-161 242-299 (306)
49 d1r9pa_ d.224.1.2 (A:) NifU-li 34.5 48 0.0035 20.6 5.8 60 62-124 34-97 (134)
50 d1vm7a_ c.72.1.1 (A:) Ribokina 29.8 25 0.0018 24.2 3.9 60 84-160 240-299 (299)
51 d2a2la1 d.110.9.1 (A:4-145) Dh 29.7 33 0.0024 21.6 4.2 36 105-143 8-43 (142)
52 d1u94a2 d.48.1.1 (A:269-328) R 29.2 41 0.003 18.1 4.6 29 72-100 16-44 (60)
53 d1gg2g_ a.137.3.1 (G:) Transdu 29.2 39 0.0028 17.8 5.5 43 3-54 3-45 (54)
54 d1xrka_ d.32.1.2 (A:) Bleomyci 28.0 15 0.0011 21.4 2.1 18 65-82 101-118 (120)
55 d1jifa_ d.32.1.2 (A:) Bleomyci 27.7 22 0.0016 20.8 2.8 18 65-82 102-119 (122)
56 d1mo6a2 d.48.1.1 (A:270-329) R 27.6 9.7 0.00071 20.9 0.9 29 72-100 16-44 (60)
57 d2fyma1 c.1.11.1 (A:140-431) E 27.6 71 0.0052 22.8 6.1 91 67-162 26-142 (292)
58 d1puee_ a.4.5.21 (E:) Transcri 27.1 46 0.0034 19.5 4.1 27 131-158 18-46 (88)
59 d1vh4a_ b.80.6.1 (A:) Stabiliz 26.6 43 0.0031 24.7 5.0 51 66-123 338-388 (413)
60 d2dcna1 c.72.1.1 (A:2-309) Hyp 26.2 33 0.0024 23.4 4.0 61 83-160 248-308 (308)
61 d1w2fa_ d.143.1.3 (A:) Inosito 26.2 27 0.002 24.6 3.5 29 47-76 206-234 (276)
62 d2d30a1 c.97.1.1 (A:1-124) mon 26.0 66 0.0048 19.7 5.1 35 107-143 1-36 (124)
63 d2v4jc1 d.203.1.1 (C:3-105) Ds 25.6 62 0.0045 19.4 4.7 34 1-38 40-73 (103)
64 d1flia_ a.4.5.21 (A:) Fli-1 {H 24.7 24 0.0017 21.3 2.5 24 135-159 25-48 (98)
65 d1hh2p4 d.202.1.1 (P:1-126) Tr 24.0 54 0.0039 20.2 4.3 34 104-137 15-49 (126)
66 d1jfua_ c.47.1.10 (A:) Membran 23.8 48 0.0035 21.0 4.3 33 66-98 140-172 (176)
67 d1xqaa_ d.32.1.2 (A:) Hypothet 23.8 18 0.0013 20.9 1.8 18 65-82 95-112 (113)
68 d1uwza_ c.97.1.1 (A:) mono-dom 23.7 74 0.0054 19.6 5.0 35 107-143 1-36 (130)
69 d1ixsa_ a.5.1.1 (A:) DNA helic 22.3 23 0.0017 18.3 1.7 36 85-120 14-49 (50)
70 d3bzka5 c.55.3.13 (A:325-473) 22.2 41 0.003 21.5 3.5 25 58-82 7-33 (149)
71 d1b0nb_ a.34.1.1 (B:) SinI ant 21.5 25 0.0018 15.9 1.6 11 148-158 19-29 (31)
72 d1jhfa1 a.4.5.2 (A:2-72) LexA 20.5 66 0.0048 17.5 3.8 23 15-37 13-35 (71)
No 1
>d1irua_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=1.1e-42 Score=268.69 Aligned_cols=163 Identities=61% Similarity=0.975 Sum_probs=156.9
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFG 80 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~ 80 (164)
+++|++.|++++|.+|+.|++.++++++++.+++.+++++|.||++++.|||+|++||||||+++||+||.+||+|++.+
T Consensus 82 ~~~D~~~l~~~~r~~~~~~~~~~~~~~~v~~la~~l~~~~~~~t~~~~~rP~~v~~ll~G~D~~~g~~Ly~~Dp~G~~~~ 161 (244)
T d1irua_ 82 MTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCG 161 (244)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHBSSBCCCSEEEEEEEEETTTEEEEEEECTTSCEEE
T ss_pred chHHHHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHHhcccccCccceeeEEEEEcCCCCcEEEEEcCCccEEe
Confidence 46899999999999999999999999999999999999999999999999999999999999877899999999999999
Q ss_pred eeEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCCeEEEEEEEcCCCcEEEcCHHHHHHHHHHh
Q 031203 81 HKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 160 (164)
Q Consensus 81 ~~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~~iei~ii~~~~~~~k~l~~~ei~~~l~~~ 160 (164)
++++|+|+|+..++++||++|...++||++||++++++||..+.++|..+++++|+|+++++++|++++++||+++|.++
T Consensus 162 ~~~~a~G~gs~~~~~~Le~~~~~~~d~t~eeai~l~~~~l~~~~~~d~~~~~iev~ii~~~~~~~~~l~~~ei~~~l~~~ 241 (244)
T d1irua_ 162 FKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLVAL 241 (244)
T ss_dssp BSEEEEETTHHHHHHHHHHHTTSCCCCCHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEETTEEEEEECCHHHHHHHHHHH
T ss_pred cceEeccCchhHHHHHHHhccccccCCCHHHHHHHHHHHHHHHHhcCCCCCcEEEEEEEeCCCcEEECCHHHHHHHHHHH
Confidence 99999999999999999999976789999999999999999999999888899999999998779999999999999999
Q ss_pred hcc
Q 031203 161 SER 163 (164)
Q Consensus 161 ~~~ 163 (164)
.||
T Consensus 242 ~~r 244 (244)
T d1irua_ 242 AER 244 (244)
T ss_dssp HTC
T ss_pred hcC
Confidence 986
No 2
>d1rypa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=3.2e-40 Score=254.62 Aligned_cols=162 Identities=48% Similarity=0.767 Sum_probs=153.9
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFG 80 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~ 80 (164)
+.+|++.+++++|.+++.|++.++++++++.+++++++++|.|+++++.|||+|++||||||+++||+||++||+|++.+
T Consensus 77 ~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~ls~~~~~~~~~~~~rP~~v~~ll~G~D~~~g~~Ly~~Dp~G~~~~ 156 (243)
T d1rypa_ 77 PIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQRAYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVG 156 (243)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHBTTSCCCSCEEEEEEEETTTEEEEEEECTTSCEEE
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhcccccCccceEEEEEEccCCCCeEEEEcCCEEEEe
Confidence 46899999999999999999999999999999999999999999999999999999999999867899999999999999
Q ss_pred eeEEeecCChHHHHHHHHHhhcC-----CCCCCHHHHHHHHHHHHHhhhhccCCCCeEEEEEEEcCCCcEEEcCHHHHHH
Q 031203 81 HKATSAGLKEQEAINFLEKKMKN-----DPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDE 155 (164)
Q Consensus 81 ~~~~aiG~~s~~~~~~Le~~~~~-----~~~ls~eea~~l~~~al~~~~~~d~~~~~iei~ii~~~~~~~k~l~~~ei~~ 155 (164)
++++|+|+|+..++++|+++|+. .+++|.+||++++++||..+.++|.+..+++|+++++++ |++++++||++
T Consensus 157 ~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~s~eeav~la~~~l~~~~~~d~~~~~iei~iitk~g--~~~l~~eeI~~ 234 (243)
T d1rypa_ 157 YKATATGPKQQEITTNLENHFKKSKIDHINEESWEKVVEFAITHMIDALGTEFSKNDLEVGVATKDK--FFTLSAENIEE 234 (243)
T ss_dssp BSEEEESTTHHHHHHHHHHHHHHHCSSSCCCSSHHHHHHHHHHHHHHHHTCCCCTTSEEEEEEETTE--EEECCHHHHHH
T ss_pred cceEEeCccHHHHHHHHHHHhhcccccccccccHHHHHHHHHHHHHHHhhccCCCCcEEEEEEeCCc--eEEeCHHHHHH
Confidence 99999999999999999999852 356899999999999999999999877799999999984 99999999999
Q ss_pred HHHHhhccC
Q 031203 156 HLTAISERD 164 (164)
Q Consensus 156 ~l~~~~~~~ 164 (164)
++.++.|||
T Consensus 235 ~l~~i~e~~ 243 (243)
T d1rypa_ 235 RLVAIAEQD 243 (243)
T ss_dssp HHHHHTTTC
T ss_pred HHHHHhccC
Confidence 999999997
No 3
>d1iruc_ d.153.1.4 (C:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=3.3e-40 Score=255.51 Aligned_cols=163 Identities=27% Similarity=0.482 Sum_probs=153.1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFG 80 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~ 80 (164)
+.+|++.+++++|.+|..|++.+|++++++.+++.+++++|.||+++++|||+|++||+|||+++||+||.+||+|++.+
T Consensus 78 ~~~D~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~l~~~~~~~~~~~~~rP~~~~~li~G~D~~~gp~Ly~~Dp~G~~~~ 157 (250)
T d1iruc_ 78 ITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGG 157 (250)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTTTBSSCCCCCEEEEEEEEETTTEEEEEEEETTTEEEE
T ss_pred ccchHHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHhhhccCCcceEEEEEEEEcCCCCCEEEEEcccccEee
Confidence 46899999999999999999999999999999999999999999999999999999999999867899999999999999
Q ss_pred eeEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEEEcCCC--cEEEcCHHHHHHHH
Q 031203 81 HKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKAS-EIEVGVVSKENP--EFRVLSIEEIDEHL 157 (164)
Q Consensus 81 ~~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii~~~~~--~~k~l~~~ei~~~l 157 (164)
++++|+|+|++.++++|+++|+ .++||++||++++++||..++++|..++ +++|++|+++++ .|++++++||++++
T Consensus 158 ~~~~a~G~gs~~a~~~Le~~y~-~~~ms~eeai~la~~al~~~~~~d~~~~~~iei~ii~~~~~~~~~~~l~~~Ei~~~l 236 (250)
T d1iruc_ 158 WKATCIGNNSAAAVSMLKQDYK-EGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLI 236 (250)
T ss_dssp CSEEEESTTTTHHHHHHHHHCC-TTCCCHHHHHHHHHHHHHHSSSCTTCCSTTCEEEEEECCSSSCEEEECCHHHHHHHH
T ss_pred eeEEEeCcChHHHHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHhcccCCCCCeEEEEEEEcCCCceeEEECCHHHHHHHH
Confidence 9999999999999999999984 3589999999999999999998886655 999999999875 38999999999999
Q ss_pred HHhhccC
Q 031203 158 TAISERD 164 (164)
Q Consensus 158 ~~~~~~~ 164 (164)
.++.|++
T Consensus 237 ~~~~e~~ 243 (250)
T d1iruc_ 237 KKHEEEE 243 (250)
T ss_dssp HHHHTTT
T ss_pred HHHHHHh
Confidence 9998764
No 4
>d1j2pa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=100.00 E-value=2.1e-39 Score=250.08 Aligned_cols=159 Identities=31% Similarity=0.527 Sum_probs=152.3
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFG 80 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~ 80 (164)
+.+|++.++++++.++..|+++++++++++.+++.+++.+|.||+++++|||+|++|+||||+ +|+||.+||+|++.+
T Consensus 78 ~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~rP~~~~~il~G~D~--~p~Ly~~Dp~G~~~~ 155 (243)
T d1j2pa_ 78 LVADARVLIDRARIEAQINRLTYDIPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVNE--VPKLYETDPSGALLE 155 (243)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHTTSBTTBCCCCEEEEEEEESS--SEEEEEECTTCCEEE
T ss_pred cccHHHHHHHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHHHHhhhccCCccceeEEEEEecC--CceEEEEeccCceee
Confidence 468999999999999999999999999999999999999999999999999999999999986 599999999999999
Q ss_pred eeEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCCeEEEEEEEcCCCcEEEcCHHHHHHHHHHh
Q 031203 81 HKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 160 (164)
Q Consensus 81 ~~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~~iei~ii~~~~~~~k~l~~~ei~~~l~~~ 160 (164)
++++|+|+|++.++++|++.| +++||++||++++++||..+.++|+.++++||+++++++..|++++++||++++.++
T Consensus 156 ~~~~a~G~g~~~a~~~Le~~y--~~~ms~eeai~la~~~l~~~~~~d~~~~~iei~iv~~~~~~~~~l~~~ei~~~~~~~ 233 (243)
T d1j2pa_ 156 YKATAIGMGRMAVTEFFEKEY--RDDLSFDDAMVLGLVAMGLSIESELVPENIEVGYVKVDDRTFKEVSPEELKPYVERA 233 (243)
T ss_dssp BSEEEESTTHHHHHHHHHHHC--CTTCCHHHHHHHHHHHHHHHHTSCCCGGGEEEEEEETTTCCCEECCHHHHHHHHHHH
T ss_pred eeEEEeCCCcHHHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEEEeCCCcEEECCHHHHHHHHHHH
Confidence 999999999999999999998 689999999999999999999999988899999999887679999999999999999
Q ss_pred hcc
Q 031203 161 SER 163 (164)
Q Consensus 161 ~~~ 163 (164)
+||
T Consensus 234 ~e~ 236 (243)
T d1j2pa_ 234 NER 236 (243)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 5
>d1iruf_ d.153.1.4 (F:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=4.5e-40 Score=253.14 Aligned_cols=161 Identities=29% Similarity=0.520 Sum_probs=150.8
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFG 80 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~ 80 (164)
+.+|++.++++++.++..|++++|++++++.+++.|++++|.|+++++.|||+|++||||||+ +||+||++||+|++.+
T Consensus 74 ~~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~~y~~~~~~rP~~v~~il~G~D~-~gp~Ly~~D~~G~~~~ 152 (238)
T d1iruf_ 74 LTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDD-MGPHIFQTCPSANYFD 152 (238)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHBTTCCCCCEEEEEEEEET-TEEEEEEECSSSCEEE
T ss_pred cchHHHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHhhccCCCcccceEEEEEEcC-CCceEEEEcCCCCEEe
Confidence 468999999999999999999999999999999999999999999999999999999999998 7999999999999999
Q ss_pred eeEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhcc--CCCCeEEEEEEEcCCCcEEEcCHHHHHHHHH
Q 031203 81 HKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQED--FKASEIEVGVVSKENPEFRVLSIEEIDEHLT 158 (164)
Q Consensus 81 ~~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d--~~~~~iei~ii~~~~~~~k~l~~~ei~~~l~ 158 (164)
++++|+|+|++.++++|+++|++..++|++||+++|++||..++.++ ....+|||++|+++++ |++++++||+++|.
T Consensus 153 ~~~~a~G~g~~~~~~~Lek~~~~~~~~~~~eav~lai~al~~~~~~~~~~~~~~iev~ii~k~~~-~~~l~~~ei~~~l~ 231 (238)
T d1iruf_ 153 CRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLE-FTIYDDDDVSPFLE 231 (238)
T ss_dssp ESEEEESTTHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTSCTTCCCCTTTEEEEEEETTEE-EEEECSGGGHHHHT
T ss_pred eeeEEECCCchhhHHHHHhhcccccCCCHHHHHHHHHHHHHHHHhhcccCCCCcEEEEEEeCCCC-EEECCHHHHHHHHH
Confidence 99999999999999999999965446799999999999999998764 3455899999999865 99999999999999
Q ss_pred Hhhcc
Q 031203 159 AISER 163 (164)
Q Consensus 159 ~~~~~ 163 (164)
.++||
T Consensus 232 ~i~ek 236 (238)
T d1iruf_ 232 GLEER 236 (238)
T ss_dssp TCCCC
T ss_pred HHHhC
Confidence 99876
No 6
>d1rypf_ d.153.1.4 (F:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=6.1e-40 Score=251.69 Aligned_cols=155 Identities=21% Similarity=0.374 Sum_probs=145.5
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFG 80 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~ 80 (164)
+++|++.+++++|.+|+.|++.++++|+++.+++.+++++|.||++++.|||||++||||||+ +||+||.+||+|++.+
T Consensus 76 ~~~D~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~l~~~~~~~t~~~~~RP~gv~~il~G~d~-~g~~Ly~idp~G~~~~ 154 (233)
T d1rypf_ 76 LAPDARVLSNYLRQQCNYSSLVFNRKLAVERAGHLLCDKAQKNTQSYGGRPYGVGLLIIGYDK-SGAHLLEFQPSGNVTE 154 (233)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHBTTCCCCCEEEEEEEEET-TEEEEEEECTTSCEEE
T ss_pred ccccHHHHHHHHHHHHHhhhhhcCCCCcHHHHHHHHHHHHHHHhcccccCCccceEEEEEEcC-CCCEEEEEccccceec
Confidence 468999999999999999999999999999999999999999999999999999999999998 6899999999999999
Q ss_pred eeEEeecCChHHHHHHHHHhhc--CCCCCCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEEEcCCCcEEEcCHHHHHHHH
Q 031203 81 HKATSAGLKEQEAINFLEKKMK--NDPAFTFQETVQTAISTLQSVLQEDFKAS-EIEVGVVSKENPEFRVLSIEEIDEHL 157 (164)
Q Consensus 81 ~~~~aiG~~s~~~~~~Le~~~~--~~~~ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii~~~~~~~k~l~~~ei~~~l 157 (164)
++++|+|+|++.++++|+++|+ ++++|+++||++++++||..+.++|..++ ++||++|+++++ |++++++||+++|
T Consensus 155 ~~~~aiG~gs~~a~~~Le~~~~~~~~~dms~eeai~l~~~~l~~~~~~d~~~~~~iev~ii~k~~~-~~~l~~~ei~~~i 233 (233)
T d1rypf_ 155 LYGTAIGARSQGAKTYLERTLDTFIKIDGNPDELIKAGVEAISQSLRDESLTVDNLSIAIVGKDTP-FTIYDGEAVAKYI 233 (233)
T ss_dssp ESEEEESTTHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHTTSCCSSCCCTTTEEEEEEETTEE-EEEEEGGGGGGGC
T ss_pred ccEEEecCchHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEECCCC-eEECCHHHHHhhC
Confidence 9999999999999999998763 36799999999999999999998876554 999999999986 9999999998764
No 7
>d1irue_ d.153.1.4 (E:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=1.4e-39 Score=249.73 Aligned_cols=156 Identities=28% Similarity=0.523 Sum_probs=147.9
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccC-----ccccceeeEEEEEcCCCCCeEEEeCCC
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAY-----MRPLGVVAMVLSIDEECGPRLFKCDPA 75 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~-----~rP~gv~~iiaG~d~~~gp~Ly~~dp~ 75 (164)
+.+|++.++++++.++..|++.+|++++++.+++.|++++|.|||+.+ .|||+|++|+||||+ +||+||.+||+
T Consensus 74 ~~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~la~~i~~~~~~~t~~~~~~~~~~rP~~~~~il~G~D~-~gp~Ly~idp~ 152 (234)
T d1irue_ 74 LIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDE-KGPQLFHMDPS 152 (234)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHTTTTCBCSTTCCSSCBSSCCCEEEEEEEEET-TEEEEEEECTT
T ss_pred ccchHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhcccccccccccceEEEEEEEEcC-CCCEEEEEecC
Confidence 468999999999999999999999999999999999999999999865 799999999999998 79999999999
Q ss_pred cceeeeeEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCCeEEEEEEEcCCCcEEEcCHHHHHH
Q 031203 76 GHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDE 155 (164)
Q Consensus 76 G~~~~~~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~~iei~ii~~~~~~~k~l~~~ei~~ 155 (164)
|++.+++++|+|+|++.++++||++| +++|+++||++++++||+.+.+++..++++||++|+++++ |++++++||++
T Consensus 153 G~~~~~~~~a~G~gs~~~~~~Le~~~--~~~~~~eeai~~a~~al~~~~~~~~~~~~iei~ii~~~~~-~k~l~~~ei~~ 229 (234)
T d1irue_ 153 GTFVQCDARAIGSASEGAQSSLQELY--HKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQN-FHMFTKEELEE 229 (234)
T ss_dssp SCEEEBSEEEESTTHHHHHHHHHHHC--CTTCCHHHHHHHHHHHHHHHCSSCCCTTSEEEEEECSSSC-CEECCHHHHHH
T ss_pred cccceeeeEEeCCchHHHHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHhccCCCCCEEEEEEECCCC-EEECCHHHHHH
Confidence 99999999999999999999999998 6899999999999999999998888778999999998875 99999999999
Q ss_pred HHHHh
Q 031203 156 HLTAI 160 (164)
Q Consensus 156 ~l~~~ 160 (164)
++.+|
T Consensus 230 ~l~~i 234 (234)
T d1irue_ 230 VIKDI 234 (234)
T ss_dssp HHTTC
T ss_pred HHHhC
Confidence 99864
No 8
>d1rype_ d.153.1.4 (E:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=2.4e-39 Score=249.53 Aligned_cols=161 Identities=24% Similarity=0.461 Sum_probs=152.3
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhcc------CccccceeeEEEEEcCCCCCeEEEeCC
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHA------YMRPLGVVAMVLSIDEECGPRLFKCDP 74 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~------~~rP~gv~~iiaG~d~~~gp~Ly~~dp 74 (164)
+.+|++.++++++.+++.|++.++++++++.++++|++++|.|||+. ++|||+|++||+|||++++|+||.+||
T Consensus 73 ~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~rP~~~~~ii~G~D~~~~p~L~~idp 152 (242)
T d1rype_ 73 LTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGHDADDGYQLFHAEP 152 (242)
T ss_dssp SGGGHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHTTTTCCBSSCTTSCCCBSSCCSEEEEEEEEETTTEEEEEEECT
T ss_pred cchhHHHHHHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHhccccccchhccccceEEEEEEEeccccceEEEEEcC
Confidence 47999999999999999999999999999999999999999998865 379999999999999867899999999
Q ss_pred CcceeeeeEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCCeEEEEEEEcCCCcEEEcCHHHHH
Q 031203 75 AGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEID 154 (164)
Q Consensus 75 ~G~~~~~~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~~iei~ii~~~~~~~k~l~~~ei~ 154 (164)
+|++.+++++|+|+|++.++++|+++| +++||++||++++++||+.+.++++.+++++|++|+++++ |+++++++|+
T Consensus 153 ~G~~~~~~~~a~G~gs~~~~~~Le~~~--~~~ms~~ea~~la~~~l~~~~~~~~~~~~~~v~~i~~~~g-~~~l~~~~i~ 229 (242)
T d1rype_ 153 SGTFYRYNAKAIGSGSEGAQAELLNEW--HSSLTLKEAELLVLKILKQVMEEKLDENNAQLSCITKQDG-FKIYDNEKTA 229 (242)
T ss_dssp TSCEEEBSEEEESTTHHHHHHHHHHHC--CTTCCHHHHHHHHHHHHHHHCSSCCCTTSEEEEEEETTTE-EEECCHHHHH
T ss_pred CCceeccceeecccchHHHHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHhccCCCCceEEEEEECCCC-eEECCHHHHH
Confidence 999999999999999999999999998 6899999999999999999999999888999999998765 9999999999
Q ss_pred HHHHHhhccC
Q 031203 155 EHLTAISERD 164 (164)
Q Consensus 155 ~~l~~~~~~~ 164 (164)
+++.++.|||
T Consensus 230 ~~~~~i~e~~ 239 (242)
T d1rype_ 230 ELIKELKEKE 239 (242)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999999875
No 9
>d1yara1 d.153.1.4 (A:13-233) Proteasome alpha subunit (non-catalytic) {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=100.00 E-value=3.4e-39 Score=245.57 Aligned_cols=153 Identities=36% Similarity=0.561 Sum_probs=146.4
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFG 80 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~ 80 (164)
+.+|++.++++++.+++.|++.++++++++.+++.+++++|.|++++++|||++++||||||+ +||+||.+||+|++.+
T Consensus 69 ~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~~~~~~~rP~~~~~li~G~d~-~gp~Ly~id~~G~~~~ 147 (221)
T d1yara1 69 LVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQ-IGPRLFDCDPAGTINE 147 (221)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTTTBTTBCCCCEEEEEEEECS-SCEEEEEECTTCCEEE
T ss_pred ccchHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhhhccCCCcceEEEEEEEec-CCCeEEEEcCCccEEE
Confidence 368999999999999999999999999999999999999999999999999999999999997 7999999999999999
Q ss_pred eeEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCCeEEEEEEEcCCCcEEEcCHHHHHHHH
Q 031203 81 HKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 157 (164)
Q Consensus 81 ~~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~~iei~ii~~~~~~~k~l~~~ei~~~l 157 (164)
++++|+|+|+..++++|+++| +++||++||++++++||..+++++...++++|++++++++ |++++++||+++|
T Consensus 148 ~~~~a~G~g~~~~~~~Le~~~--~~~ms~~ea~~la~~~l~~~~~~~~~~~~~ei~~i~~~~~-~r~l~~~ei~~~l 221 (221)
T d1yara1 148 YKATAIGSGKDAVVSFLEREY--KENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNK-YRIYDQEEVKKFL 221 (221)
T ss_dssp BSEEEESTTHHHHHHHHHHHC--CTTCCHHHHHHHHHHHHHHTSCSSCCCCCCEEEEEETTSC-CEECCHHHHHTTC
T ss_pred eeEEEECCchHHHHHHHHHHh--hccccHHHHHHHHHHHHHHHHhccCCCCCcEEEEEEcCCC-EEECCHHHHHHhC
Confidence 999999999999999999998 6899999999999999999998888778999999998875 9999999999864
No 10
>d1irug_ d.153.1.4 (G:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=4.5e-39 Score=248.54 Aligned_cols=159 Identities=28% Similarity=0.364 Sum_probs=145.9
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFG 80 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~ 80 (164)
+.+|++.|++++|.+|+.|++++|++++++.++++|++++|.|||++++|||+|++||||||+++||+||.+||+|++.+
T Consensus 80 ~~~D~~~l~~~~~~~~~~~~~~~g~~i~~~~la~~la~~~~~~t~~~~~rP~~vs~li~G~D~~~gp~Ly~iDp~G~~~~ 159 (245)
T d1irug_ 80 LLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYG 159 (245)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTTSBSSBCCCSEEEEEEEEETTTEEEEEEECTTCCEEE
T ss_pred CchhHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhccccccccceEEEEEEEcCCCCceEEEEcCCceEEe
Confidence 46899999999999999999999999999999999999999999999999999999999999767999999999999999
Q ss_pred eeEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEEEcCCCcEEEcCHHHHHHHHHH
Q 031203 81 HKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKAS-EIEVGVVSKENPEFRVLSIEEIDEHLTA 159 (164)
Q Consensus 81 ~~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii~~~~~~~k~l~~~ei~~~l~~ 159 (164)
++++|+|+|++.++++||+.| +++||.+||++++++||+.+.+++.... ++||++|+++++.++++.|.|+.+.+.+
T Consensus 160 ~~~~a~G~gs~~a~~~Le~~~--~~dmt~eea~~l~~~~l~~~~~~~~~~~~~iei~~v~~~~~~~~~~~~~e~~~~~~~ 237 (245)
T d1irug_ 160 YWGCAIGKARQAAKTEIEKLQ--MKEMTCRDIVKEVAKIIYIVHDEVKDKAFELELSWVGELTNGRHEIVPKDIREEAEK 237 (245)
T ss_dssp BSEEEESTTHHHHHHHHTTSC--GGGCCHHHHHHHHHHHHHHHSCSSSSCCEEEEEEECBTTTTTCCEECCHHHHHHHHH
T ss_pred eeEEEECCccHHHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHhhccCCCceEEEEEEEecCCCeEEEChHHHHHHHHH
Confidence 999999999999999999998 5889999999999999999987765555 8999999987655677777787777666
Q ss_pred hh
Q 031203 160 IS 161 (164)
Q Consensus 160 ~~ 161 (164)
..
T Consensus 238 ~~ 239 (245)
T d1irug_ 238 YA 239 (245)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 11
>d1rypb_ d.153.1.4 (B:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=2.1e-38 Score=245.30 Aligned_cols=158 Identities=33% Similarity=0.543 Sum_probs=148.2
Q ss_pred CCchHHHHHHHHHHHHH-HHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCccee
Q 031203 1 MTADARTLVQQARYEAA-EFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFF 79 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~-~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~ 79 (164)
+++|++.++++++.+++ +|+..++++++++.+++.+++++|.|+++++.|||+|++||||||+.+||+||++||+|++.
T Consensus 78 ~~~D~~~l~~~~~~~~~~~y~~~~~~~~~~~~la~~~~~~~~~~~~~~~~rp~~v~~li~G~D~~~gp~Ly~id~~G~~~ 157 (250)
T d1rypb_ 78 MGPDYRVLVDKSRKVAHTSYKRIYGEYPPTKLLVSEVAKIMQEATQSGGVRPFGVSLLIAGHDEFNGFSLYQVDPSGSYF 157 (250)
T ss_dssp CHHHHHHHHHHHHHHHHHTTHHHHSSCCCHHHHHHHHHHHHHHTTTSBTBCCCCEEEEEEEEETTTEEEEEEECTTSCEE
T ss_pred cccHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhhcCCcCeeEEEEEEEecCCCCCEEEEEcCcEEEE
Confidence 46899999999999997 48999999999999999999999999999999999999999999987789999999999999
Q ss_pred eeeEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCCeEEEEEEEcCC--------------CcE
Q 031203 80 GHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKEN--------------PEF 145 (164)
Q Consensus 80 ~~~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~~iei~ii~~~~--------------~~~ 145 (164)
+++++|+|+|+..++++||++| +++||++||++++++||..+.++|.+..+++|++|++++ +.|
T Consensus 158 ~~~~~a~G~gs~~a~~~Le~~~--~~~ms~eea~~la~~al~~~~~~d~s~~~iev~vi~~~~~~~~~~~~v~~~~~~~f 235 (250)
T d1rypb_ 158 PWKATAIGKGSVAAKTFLEKRW--NDELELEDAIHIALLTLKESVEGEFNGDTIELAIIGDENPDLLGYTGIPTDKGPRF 235 (250)
T ss_dssp EBSEEEESTTHHHHHHHHHHHC--CTTCCHHHHHHHHHHHHHHHCCSCCSTTTEEEEEECSCCGGGTSEESCSSCCCCSE
T ss_pred EeeEEecCcchHHHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEEeCCCcccccccccccccCCce
Confidence 9999999999999999999998 689999999999999999999999876699999998753 359
Q ss_pred EEcCHHHHHHHHHHh
Q 031203 146 RVLSIEEIDEHLTAI 160 (164)
Q Consensus 146 k~l~~~ei~~~l~~~ 160 (164)
++++++||+++|++|
T Consensus 236 r~ls~eei~~~l~~l 250 (250)
T d1rypb_ 236 RKLTSQEINDRLEAL 250 (250)
T ss_dssp EECCHHHHHHHHTTC
T ss_pred EECCHHHHHHHHHhC
Confidence 999999999999864
No 12
>d1rypd_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=3.6e-38 Score=242.81 Aligned_cols=160 Identities=31% Similarity=0.529 Sum_probs=149.1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCC-CCCeEEEeCCCccee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEE-CGPRLFKCDPAGHFF 79 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~-~gp~Ly~~dp~G~~~ 79 (164)
+.+|++.|+++++.+++.|++.+|++++++.+++++++++|.||+++++|||+|++||||||++ +||+||.+||+|++.
T Consensus 76 ~~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~la~~i~~~~~~~t~~~~~rP~~v~~li~G~d~~~~~p~Ly~idp~G~~~ 155 (241)
T d1rypd_ 76 LNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKLYQTEPSGIYS 155 (241)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTTSSTTBCCCSEEEEEEECCTTCCSCEEEEECTTSCEE
T ss_pred ccchHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhhccccCcccceEEEEEEccccCcceEEEecCCEEEE
Confidence 4689999999999999999999999999999999999999999999999999999999999964 589999999999999
Q ss_pred eeeEEeecCChHHHHHHHHHhhcC-CCCCCHHHHHHHHHHHHHhhhhccCCCCeEEEEEEEcCCCcEEEcCHHHHHHHHH
Q 031203 80 GHKATSAGLKEQEAINFLEKKMKN-DPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 158 (164)
Q Consensus 80 ~~~~~aiG~~s~~~~~~Le~~~~~-~~~ls~eea~~l~~~al~~~~~~d~~~~~iei~ii~~~~~~~k~l~~~ei~~~l~ 158 (164)
+++++|+|+|++.++++|++.|+. .++||.+|++++|++||..+.+. +..+++|+|++++++ |++++++||+++|.
T Consensus 156 ~~~~~a~G~gs~~~~~~Le~~~~~~~~~~t~~e~i~lal~al~~~~~~--~~~~iei~ii~~d~~-~~~l~~~ei~~~l~ 232 (241)
T d1rypd_ 156 SWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSLLEVVQT--GAKNIEITVVKPDSD-IVALSSEEINQYVT 232 (241)
T ss_dssp EBSEEEESTTHHHHHHHHHTTCCTTSCCCSHHHHHHHHHHHHHHHHCS--CSTTEEEEEEETTTE-EEECCHHHHHHHHH
T ss_pred eeCeEEECcCHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHHHHHhcC--CCCcEEEEEEECCCC-EEECCHHHHHHHHH
Confidence 999999999999999999999954 46899999999999999998754 455999999999874 99999999999999
Q ss_pred Hhhcc
Q 031203 159 AISER 163 (164)
Q Consensus 159 ~~~~~ 163 (164)
+++++
T Consensus 233 ~i~~~ 237 (241)
T d1rypd_ 233 QIEQE 237 (241)
T ss_dssp HHTHH
T ss_pred HHHHH
Confidence 99864
No 13
>d1irud_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=1.3e-38 Score=245.56 Aligned_cols=160 Identities=30% Similarity=0.517 Sum_probs=146.3
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFG 80 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~ 80 (164)
+.+|++.++++++.+|+.|++.+|.+|+++.+++++++++|.||+++++|||+|++||+|||+++||+||++||+|++.+
T Consensus 75 ~~~D~~~l~~~~~~~~~~~~~~~~~~i~v~~la~~ls~~~~~~t~~~~~rp~~v~~li~G~D~~~~p~Ly~idp~G~~~~ 154 (243)
T d1irud_ 75 LTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHA 154 (243)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHTTSBTTBCCCCEEEEEEEECSSSCEEEEEECTTSCEEE
T ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHhcccCCccceEEEEEEEcCCCCCEEEEecCcEEEEe
Confidence 46899999999999999999999999999999999999999999999999999999999999767899999999999999
Q ss_pred eeEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCCeEEEEEEEcCCCcEEEcCHHHHHHHHHHh
Q 031203 81 HKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 160 (164)
Q Consensus 81 ~~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~~iei~ii~~~~~~~k~l~~~ei~~~l~~~ 160 (164)
++++|+|+|++.++++|+++|+.+..++.++++++++++|...... +.++++|++++++++ |++++++||++++.++
T Consensus 155 ~~~~a~G~gs~~a~~~Lek~~~~~~~~~~~~~i~~ai~~l~~~~~~--~~~~vei~ii~k~~~-~~~l~~~eI~~~l~~i 231 (243)
T d1irud_ 155 WKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQS--GGKNIELAVMRRDQS-LKILNPEEIEKYVAEI 231 (243)
T ss_dssp BSEEEESTTHHHHHHHHTTTCCSSTTCSHHHHHHHHHHHHHTTSCT--TSTTCCEEEEESSSC-EECCCHHHHHHHTTTT
T ss_pred ccEEEECCChHHHHHHHHHhcccCCCccHHHHHHHHHHHHHHHhcC--CCCcEEEEEEECCCC-EEECCHHHHHHHHHHH
Confidence 9999999999999999999995443448888999999999877643 344899999999865 9999999999999998
Q ss_pred hcc
Q 031203 161 SER 163 (164)
Q Consensus 161 ~~~ 163 (164)
+++
T Consensus 232 ~~~ 234 (243)
T d1irud_ 232 EKE 234 (243)
T ss_dssp TTT
T ss_pred Hhh
Confidence 843
No 14
>d1rypc_ d.153.1.4 (C:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=3.2e-37 Score=237.85 Aligned_cols=158 Identities=27% Similarity=0.466 Sum_probs=149.7
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFG 80 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~ 80 (164)
+++|++.++++++.+++.|++.++++++++.+++.+++++|.|++++++|||+|++||||||+++||+||.+||+|++.+
T Consensus 79 ~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~rP~~~~~ll~G~d~~~gp~Ly~id~~Gs~~~ 158 (244)
T d1rypc_ 79 LTADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYTG 158 (244)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHBSSCCCCCEEEEEEEEETTTEEEEEEECTTCCEEE
T ss_pred ccCcHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhhhhhccccCccceeEEEEEEecCCCceEEEecCCCcEee
Confidence 46899999999999999999999999999999999999999999999999999999999999867899999999999999
Q ss_pred eeEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEEEcCCC----cEEEcCHHHHHH
Q 031203 81 HKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKAS-EIEVGVVSKENP----EFRVLSIEEIDE 155 (164)
Q Consensus 81 ~~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii~~~~~----~~k~l~~~ei~~ 155 (164)
++++|+|+|+..+.++|++.| +++||++||++++++||..+.++|..++ ++||++|++++. .+++++++||++
T Consensus 159 ~~~~a~G~g~~~a~~~Le~~~--~~~ms~eeai~l~~~al~~a~~~d~~~~~~iei~ii~~~~~~~~~~~~~~~~~Ei~~ 236 (244)
T d1rypc_ 159 WKAISVGANTSAAQTLLQMDY--KDDMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKGANDGEVYQKIFKPQEIKD 236 (244)
T ss_dssp BSEEEESTTHHHHHHHHHHHC--CTTCCHHHHHHHHHHHHHHHCSSSSCCGGGEEEEEEECCSSSSSCEEEECCHHHHHH
T ss_pred eeeeeccchhHHHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHhccCCCCCcEEEEEEECCCcccceeEEECCHHHHHH
Confidence 999999999999999999998 6899999999999999999999998877 899999998863 388999999999
Q ss_pred HHHHh
Q 031203 156 HLTAI 160 (164)
Q Consensus 156 ~l~~~ 160 (164)
+|.+-
T Consensus 237 ~l~k~ 241 (244)
T d1rypc_ 237 ILVKT 241 (244)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99864
No 15
>d1rypg_ d.153.1.4 (G:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=3.6e-36 Score=232.01 Aligned_cols=161 Identities=24% Similarity=0.383 Sum_probs=143.8
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFG 80 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~ 80 (164)
+.+|++.|+++++.+++.|++.++++++++.+++.+++++|.||++++.|||+|++||||||+ +||+||.+||+|++.+
T Consensus 77 ~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~t~~~~~RP~~~~~iiaG~D~-~gp~Ly~idp~Gs~~~ 155 (244)
T d1rypg_ 77 LIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTLYNSVRPFGVSTIFGGVDK-NGAHLYMLEPSGSYWG 155 (244)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTTSCTTBCCCCEEEEEEEEET-TEEEEEEECTTSCEEE
T ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhhcccccCCceEEEEEEEEeC-CCCEEEEEcCCccEEe
Confidence 468999999999999999999999999999999999999999999999999999999999998 7999999999999999
Q ss_pred eeEEeecCChHHHHHHHHHhh-cCCCCCCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEEEcC--CCcEEEcCHHHHHHH
Q 031203 81 HKATSAGLKEQEAINFLEKKM-KNDPAFTFQETVQTAISTLQSVLQEDFKAS-EIEVGVVSKE--NPEFRVLSIEEIDEH 156 (164)
Q Consensus 81 ~~~~aiG~~s~~~~~~Le~~~-~~~~~ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii~~~--~~~~k~l~~~ei~~~ 156 (164)
++++|+|+|+..++++||+.. +++++||.+||++++++||..+.+++.... +++|++++.+ ++.++.++.++++++
T Consensus 156 ~~~~a~G~gs~~~~~~Lek~~~~~~~~mt~eeai~la~~~L~~~~~~~~~~~~~iev~ii~~~~~~~~~~~~~~e~~~~~ 235 (244)
T d1rypg_ 156 YKGAATGKGRQSAKAELEKLVDHHPEGLSAREAVKQAAKIIYLAHEDNKEKDFELEISWCSLSETNGLHKFVKGDLLQEA 235 (244)
T ss_dssp BSEEEESTTHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHGGGGTTSCEEEEEEEEETTTTTTSEEECCTHHHHHH
T ss_pred cCeEecCCccHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHhcccCCCCeEEEEEEEEEcCCCeEEECCHHHHHHH
Confidence 999999999999999999731 126899999999999999999998776655 8999999853 334677777777777
Q ss_pred HHHhhc
Q 031203 157 LTAISE 162 (164)
Q Consensus 157 l~~~~~ 162 (164)
+...++
T Consensus 236 ~~~~~~ 241 (244)
T d1rypg_ 236 IDFAQK 241 (244)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766543
No 16
>d1irub_ d.153.1.4 (B:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=2.8e-36 Score=230.68 Aligned_cols=155 Identities=34% Similarity=0.555 Sum_probs=148.7
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFG 80 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~ 80 (164)
+.+|++.|+++++.+++.|+++++++++++.+++.+++++|.|+++++.|||+++++++|+|+ +||+||.+||+|++.+
T Consensus 78 ~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~li~g~d~-~~~~ly~id~~G~~~~ 156 (233)
T d1irub_ 78 MGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNE-GRPYLFQSDPSGAYFA 156 (233)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTTTSBTBCCCSEEEEEEEECS-SSEEEEEECTTSCEEE
T ss_pred cchHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhccccccceEEEeeeeccc-CCceEEEEcCCcceEe
Confidence 368999999999999999999999999999999999999999999999999999999999998 8999999999999999
Q ss_pred eeEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCCeEEEEEEEcCCCcEEEcCHHHHHHHHHHh
Q 031203 81 HKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 160 (164)
Q Consensus 81 ~~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~~iei~ii~~~~~~~k~l~~~ei~~~l~~~ 160 (164)
++++|+|+|+..++++|++.| +++||++||++++++||..+.++|+.+++++|+++++++ +++++|+||+++|.++
T Consensus 157 ~~~~a~G~gs~~~~~~Le~~~--~~~ms~eea~~l~~~~L~~~~~~d~~~~~vev~ii~~~g--~~~l~~~eI~~~l~~i 232 (233)
T d1irub_ 157 WKATAMGKNYVNGKTFLEKRY--NEDLELEDAIHTAILTLKESFEGQMTEDNIEVGICNEAG--FRRLTPTEVKDYLAAI 232 (233)
T ss_dssp BSEEEESTTHHHHHHHHHHHC--CTTCCHHHHHHHHHHHHHTTCCSCCCSSSEEEEEEETTE--EEECCHHHHHHHHTTC
T ss_pred ccceecCCcHHHHHHHHHhhc--ccCccHHHHHHHHHHHHHHHHhccCCCCcEEEEEEeCCC--eEECCHHHHHHHHHHh
Confidence 999999999999999999998 689999999999999999999999987899999999874 9999999999999876
No 17
>d1yarh1 d.153.1.4 (H:1-203) Proteasome beta subunit (catalytic) {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=100.00 E-value=1.6e-35 Score=222.21 Aligned_cols=152 Identities=22% Similarity=0.358 Sum_probs=141.6
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFG 80 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~ 80 (164)
+++|++.++++++.+++.|++.++++++++.+++++++++|.+ +.|||++++|+||+|+ +|+||.+||+|++.+
T Consensus 48 ~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~----~~~p~~~~~lvaG~d~--~p~l~~~d~~G~~~~ 121 (203)
T d1yarh1 48 LVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQV----KYMPYMVQLLVGGIDT--APHVFSIDAAGGSVE 121 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHT----TTSCCCEEEEEEEESS--SEEEEEECTTCCEEE
T ss_pred CcchHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHhh----ccCCccceeEEEEEcC--CCeeEecCCccceec
Confidence 3689999999999999999999999999999999999988654 4689999999999986 599999999999999
Q ss_pred eeEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEEEcCCCcEEEcCHHHHHHHHHH
Q 031203 81 HKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKAS-EIEVGVVSKENPEFRVLSIEEIDEHLTA 159 (164)
Q Consensus 81 ~~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii~~~~~~~k~l~~~ei~~~l~~ 159 (164)
++++|+|+|++.+.++|+++| +++||.+||++++.+||..+.++|..++ +++|++|+++++ |+.++++||++++.+
T Consensus 122 ~~~~a~G~g~~~~~~~L~~~~--~~~~s~eea~~l~~~~l~~~~~~d~~~~~~v~v~ii~~~~g-~~~l~~~ei~~~~~~ 198 (203)
T d1yarh1 122 DIYASTGSGSPFVYGVLESQY--SEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDG-YVQLPTDQIESRIRK 198 (203)
T ss_dssp ESEEEESTTHHHHHHHHHHHC--CTTCCHHHHHHHHHHHHHHHHHHCTTCCSCCEEEEEETTTE-EEECCHHHHHHHHHH
T ss_pred ccccccCCCcHHHHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEEECCCC-EEECCHHHHHHHHHH
Confidence 999999999999999999998 6899999999999999999999998776 799999998764 999999999999988
Q ss_pred hh
Q 031203 160 IS 161 (164)
Q Consensus 160 ~~ 161 (164)
+.
T Consensus 199 ~~ 200 (203)
T d1yarh1 199 LG 200 (203)
T ss_dssp HT
T ss_pred hC
Confidence 64
No 18
>d1irul_ d.153.1.4 (L:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=5.3e-35 Score=219.20 Aligned_cols=152 Identities=14% Similarity=0.176 Sum_probs=142.5
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFG 80 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~ 80 (164)
..+|++.++++++.+++.|++.++++++++.+++++++++|.|+ .+||+++++++|+|+ +||+||.+||+|++.+
T Consensus 48 ~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~----~~p~~~~~lvaG~d~-~~~~l~~~d~~G~~~~ 122 (201)
T d1irul_ 48 GAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYK----GMGLSMGTMICGWDK-RGPGLYYVDSEGNRIS 122 (201)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHTTT----TSCCCBEEEEEEECS-SSEEEEEEESSSCEEE
T ss_pred ccchHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhhcc----CCCceEEEEEEEEec-CCceEEEEccCceEEE
Confidence 36899999999999999999999999999999999999997654 479999999999998 7999999999999999
Q ss_pred eeEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEEEcCCCcEEEcCHHHHHHHHHH
Q 031203 81 HKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKAS-EIEVGVVSKENPEFRVLSIEEIDEHLTA 159 (164)
Q Consensus 81 ~~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii~~~~~~~k~l~~~ei~~~l~~ 159 (164)
++++|+|+|++.++++|++.| +++||.+||++++++||..+.++|..++ .++|++|+++| +++++++||.+++.+
T Consensus 123 ~~~~a~G~g~~~~~~~Le~~~--~~~ms~eea~~l~~~~l~~~~~~d~~sg~~~~v~~i~~~G--~~~i~~~ev~~~~~~ 198 (201)
T d1irul_ 123 GATFSVGSGSVYAYGVMDRGY--SYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDG--WIRVSSDNVADLHEK 198 (201)
T ss_dssp CSEEEESTTHHHHHHHHHTTC--CTTCCHHHHHHHHHHHHHHHHHHBTTCCSEEEEEEECSSC--EEEEEEEEHHHHHHH
T ss_pred eeeEEecCchHHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHhCCCCCCceEEEEEeCCc--eEEECHHHHHHHHHh
Confidence 999999999999999999998 6899999999999999999999998777 99999999985 888999999999887
Q ss_pred hh
Q 031203 160 IS 161 (164)
Q Consensus 160 ~~ 161 (164)
++
T Consensus 199 ~~ 200 (201)
T d1irul_ 199 YS 200 (201)
T ss_dssp HT
T ss_pred hc
Confidence 64
No 19
>d1rypk_ d.153.1.4 (K:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=4.2e-35 Score=219.30 Aligned_cols=147 Identities=14% Similarity=0.196 Sum_probs=135.9
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCC-CCCeEEEeCCCccee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEE-CGPRLFKCDPAGHFF 79 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~-~gp~Ly~~dp~G~~~ 79 (164)
+.+|++.|.+.++.+++.|+++++++++|+.+++++++.++.+++ +.|||++++||||||+. +||+||.+||+|++.
T Consensus 49 ~~aD~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~P~~~~~liaG~D~~~~~p~L~~id~~G~~~ 126 (198)
T d1rypk_ 49 EAGDTVQFAEYIQANIQLYSIREDYELSPQAVSSFVRQELAKSIR--SRRPYQVNVLIGGYDKKKNKPELYQIDYLGTKV 126 (198)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHTT--SSSCCCEEEEEEEEETTTTEEEEEEECTTCCEE
T ss_pred CcccHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHh--cccccceEEEEEEEecCCCceEEEEecccccEE
Confidence 358999999999999999999999999999999999999866543 57999999999999974 589999999999999
Q ss_pred eeeEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEEEcCCCcEEEcCHHHH
Q 031203 80 GHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKAS-EIEVGVVSKENPEFRVLSIEEI 153 (164)
Q Consensus 80 ~~~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii~~~~~~~k~l~~~ei 153 (164)
+++++|+|+|+..++++|+++| +++||.+||++++.+||..+..+|..++ +++|++|+++| ++.+++.++
T Consensus 127 ~~~~~a~G~gs~~~~~~Le~~~--~~~~~~eea~~l~~~~l~~~~~~d~~s~~~~~v~vi~~dG--~~~~~~~~~ 197 (198)
T d1rypk_ 127 ELPYGAHGYSGFYTFSLLDHHY--RPDMTTEEGLDLLKLCVQELEKRMPMDFKGVIVKIVDKDG--IRQVDDFQA 197 (198)
T ss_dssp ECSEEECTTHHHHHHHHHHHHC--CTTCCHHHHHHHHHHHHHHHHHHCSBCCCCEEEEEEETTE--EEEECCCSC
T ss_pred ecceEEEeccchhhHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHhcCcCCCcEEEEEEcCCC--eEEcchhcc
Confidence 9999999999999999999998 6899999999999999999999998777 89999999985 899888765
No 20
>d1j2qh_ d.153.1.4 (H:) Proteasome beta subunit (catalytic) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=100.00 E-value=2.3e-34 Score=215.33 Aligned_cols=152 Identities=22% Similarity=0.336 Sum_probs=142.0
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFG 80 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~ 80 (164)
+.+|++.|+++++.+++.|++.++.+++++.+++++++++|.|+ .|||++++|+||||+ .||+||.+||+|+..+
T Consensus 48 ~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~----~~p~~~~~lvaG~d~-~~~~l~~~d~~G~~~~ 122 (202)
T d1j2qh_ 48 SVGDAQFLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYR----YFPYLVQLLIGGIDS-EGKSIYSIDPIGGAIE 122 (202)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTT----TSCCCEEEEEEEEET-TEEEEEEECTTCCEEE
T ss_pred cchhHHHHHHHHHHHhhhhhhccCCCccHHHHHHHHHHHHhhhc----ccceeeEEEEEEEcC-CCceEEEEeCCCCeEe
Confidence 36899999999999999999999999999999999999998765 469999999999998 7899999999999877
Q ss_pred e-eEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEEEcCCCcEEEcCHHHHHHHHH
Q 031203 81 H-KATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKAS-EIEVGVVSKENPEFRVLSIEEIDEHLT 158 (164)
Q Consensus 81 ~-~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii~~~~~~~k~l~~~ei~~~l~ 158 (164)
+ .++|+|+|++.++++|+++| +++||.+||++++++||..+.++|..++ +++|++|++++ +++++++||++++.
T Consensus 123 ~~~~~a~G~g~~~~~~~Le~~~--~~~ms~~ea~~l~~~al~~~~~~d~~~g~~v~v~~i~~~g--~~~~~~~ei~~~l~ 198 (202)
T d1j2qh_ 123 EKDIVATGSGSLTAYGVLEDRF--TPEIGVDEAVELAVRAIYSAMKRDSASGDGIDVVKITEDE--FYQYSPEEVEQILA 198 (202)
T ss_dssp ESSEEEESTTHHHHHHHHHHHC--CTTCCHHHHHHHHHHHHHHHHTTCTTSCSCEEEEEECSSC--EEECHHHHHHHHGG
T ss_pred ecceEEccCChHHHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEEECCC--EEEeCHHHHHHHHH
Confidence 6 58999999999999999998 6899999999999999999999998877 89999999985 89999999999999
Q ss_pred Hhh
Q 031203 159 AIS 161 (164)
Q Consensus 159 ~~~ 161 (164)
++.
T Consensus 199 ~~~ 201 (202)
T d1j2qh_ 199 KFR 201 (202)
T ss_dssp GTT
T ss_pred Hhh
Confidence 875
No 21
>d1ryph_ d.153.1.4 (H:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=7.8e-35 Score=219.07 Aligned_cols=146 Identities=15% Similarity=0.184 Sum_probs=134.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceeee
Q 031203 2 TADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGH 81 (164)
Q Consensus 2 ~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~~ 81 (164)
.+|++.|+++++.+++.|+++++++ ++..+++.++++++. +.+||++++||||||++++|+||.+||+|++.++
T Consensus 58 ~aD~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~p~~~~~lvaG~d~~~~p~Ly~~d~~G~~~~~ 131 (205)
T d1ryph_ 58 AADTQAIADIVQYHLELYTSQYGTP-STETAASVFKELCYE-----NKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKL 131 (205)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSC-CHHHHHHHHHHHHHH-----TTTTCCEEEEEEEEETTTEEEEEEECTTSCCEEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHcCCc-cHHHHHHHHHHHHHh-----CccCceEEEEEEeecCCCCcEEEEECCCCcEEec
Confidence 6899999999999999999999976 578899999988732 3579999999999998788999999999999999
Q ss_pred eEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEEEcCCCcEEEcCHHHHHH
Q 031203 82 KATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKAS-EIEVGVVSKENPEFRVLSIEEIDE 155 (164)
Q Consensus 82 ~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii~~~~~~~k~l~~~ei~~ 155 (164)
+++|+|+|+..++++|++.| +++||.+||++++++||..+.++|+.++ +++|++|+++|..++.+.|+|+++
T Consensus 132 ~~~a~G~g~~~~~~~Le~~~--~~~ms~~ea~~l~~~al~~a~~rD~~sg~~v~v~iitk~G~~~~~~~~~e~~~ 204 (205)
T d1ryph_ 132 PYAIAGSGSTFIYGYCDKNF--RENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVERLIFYPDEYEQ 204 (205)
T ss_dssp SEEEESGGGGGGHHHHHHHC--CTTCCHHHHHHHHHHHHHHHHHHBTTCCSCEEEEEEETTEEEEEEECHHHHTC
T ss_pred CeEEeecCcHHHHHHHHhhh--hcccCHHHHHHHHHHHHHHHHHhcCcCCCCEEEEEEcCCceEEEecCcccccc
Confidence 99999999999999999998 6899999999999999999999999877 899999999986677899999875
No 22
>d1rypl_ d.153.1.4 (L:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=2.6e-34 Score=217.10 Aligned_cols=155 Identities=12% Similarity=0.153 Sum_probs=144.3
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFG 80 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~ 80 (164)
+.+|++.|+++++.+++.|++.++++++|+.+++++++++|.|. .+|++++.+++|+|+++||+||.+||+|++.+
T Consensus 48 ~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~ls~~~~~~~----~~p~~~~~~l~G~~~~~g~~Ly~id~~G~~~~ 123 (212)
T d1rypl_ 48 GAADCQFWETWLGSQCRLHELREKERISVAAASKILSNLVYQYK----GAGLSMGTMICGYTRKEGPTIYYVDSDGTRLK 123 (212)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTT----TSCCCBEEEEEEEETTTEEEEEEEETTCCEEE
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhc----cCCcceEeeeeEeecCCCCEEEEECCCceEEe
Confidence 36899999999999999999999999999999999999997653 45899999999998878999999999999999
Q ss_pred eeEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEEEcCCCcEEEcCHHHHHHHHHH
Q 031203 81 HKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKAS-EIEVGVVSKENPEFRVLSIEEIDEHLTA 159 (164)
Q Consensus 81 ~~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii~~~~~~~k~l~~~ei~~~l~~ 159 (164)
++++|+|+|++.++++|+++| +++||.+||++++++||..+.+||..++ +++|++|++++ +++++++||.+++.+
T Consensus 124 ~~~~a~G~gs~~~~~~Le~~~--~~~mt~~ea~~l~~~al~~~~~rd~~sg~~v~v~vi~~~g--~~~~~~~ev~~~~~~ 199 (212)
T d1rypl_ 124 GDIFCVGSGQTFAYGVLDSNY--KWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDG--WIYHGNHDVGELFWK 199 (212)
T ss_dssp CSEEEESTTHHHHHHHHHHHC--CTTCCHHHHHHHHHHHHHHHHHHBTTCCSEEEEEEEETTE--EEEEEEEEHHHHHHH
T ss_pred cceEEEccCcccchhHHHHhc--cCCCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCc--eEEeCHHHHHHHHHH
Confidence 999999999999999999998 6899999999999999999999999887 89999999985 999999999999988
Q ss_pred hhcc
Q 031203 160 ISER 163 (164)
Q Consensus 160 ~~~~ 163 (164)
+.++
T Consensus 200 ~~~~ 203 (212)
T d1rypl_ 200 VKEE 203 (212)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8754
No 23
>d1q5qa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic) {Rhodococcus erythropolis [TaxId: 1833]}
Probab=100.00 E-value=3.3e-34 Score=218.88 Aligned_cols=155 Identities=14% Similarity=0.198 Sum_probs=133.5
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCC---CCCeEEEeCCCc
Q 031203 1 MTADARTLVQQARYEAAEFRFKYG-YEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEE---CGPRLFKCDPAG 76 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~-~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~---~gp~Ly~~dp~G 76 (164)
+.+|++.|+++++.+|+.|++.++ .+++++.+++.++++++. ++..++|||||++||||||.. +||+||.+||+|
T Consensus 59 ~~aD~~~l~~~~r~~~~~~~~~~~~~~~~~~~la~~~~~~~~~-~~~~~~rP~gvs~lvaG~D~~g~~~~p~Ly~vDpsG 137 (227)
T d1q5qa_ 59 KYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGT-IFTEQPKPYEVEICVAEVGRVGSPKAPQLYRITYDG 137 (227)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSCGGGCCHHHHHHHHHHHHHH-HHHHSSSCCCEEEEEEECCCSSCCCCCEEEEEETTS
T ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHH-HHHhcCCCceEEEEEEEEecCCCCCCCEEEEEcccc
Confidence 468999999999999999999998 568999999999988664 344567999999999999863 579999999999
Q ss_pred ceeeee-EEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccC-----CCCeEEEEEEEcCCC--cEEEc
Q 031203 77 HFFGHK-ATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDF-----KASEIEVGVVSKENP--EFRVL 148 (164)
Q Consensus 77 ~~~~~~-~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~-----~~~~iei~ii~~~~~--~~k~l 148 (164)
++.+++ +++.|++++.++++|+++| +++||++||+++|++||+.++.+|. ...++||+|++++++ .|+++
T Consensus 138 ~~~~~~~~~~~g~~s~~~~~~Le~~y--~~~ms~eea~~la~~aL~~a~~~d~~~~~~~~~~ievavi~k~~~~~~fr~l 215 (227)
T d1q5qa_ 138 SIVDEQHFVVMGGTTEPIATAMRESY--RADLDLEAAVGIAVNALRQGGAGEGEKRNVDVASLEVAVLDQSRPRRAFRRI 215 (227)
T ss_dssp CEEEESSEEEESSSHHHHHHHHHHHC--CTTCCHHHHHHHHHHHHTTCC--------CCSSCSEEEEEETTSSSCCEEEC
T ss_pred ceeeecccccCCCchHHHHHHHHHhc--cCCCCHHHHHHHHHHHHHHHhhcccccCCcCcceEEEEEEECCCCccceEEc
Confidence 998876 5677788999999999998 6899999999999999999998764 345799999999874 69999
Q ss_pred CHHHHHHHHH
Q 031203 149 SIEEIDEHLT 158 (164)
Q Consensus 149 ~~~ei~~~l~ 158 (164)
+++||+++|.
T Consensus 216 ~~~ei~~~l~ 225 (227)
T d1q5qa_ 216 AGTALEQLVP 225 (227)
T ss_dssp CHHHHHTTSC
T ss_pred CHHHHHHHhc
Confidence 9999998875
No 24
>d1iruh_ d.153.1.4 (H:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=4.7e-34 Score=214.12 Aligned_cols=150 Identities=14% Similarity=0.184 Sum_probs=140.0
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFG 80 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~ 80 (164)
+.+|++.++++++.+++.|+++++++++|+.+++++++.++.| .+||++++|++|||+.++|+||.+||.|++.+
T Consensus 48 ~~aD~~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~l~~~-----~~p~~~~~lvaG~d~~~~~~l~~~d~~g~~~~ 122 (202)
T d1iruh_ 48 SAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRY-----REDLMAGIIIAGWDPQEGGQVYSVPMGGMMVR 122 (202)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHT-----TTTCCEEEEEEEEETTTEEEEEEECTTSCCEE
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhh-----ccceeEEEEEEEeecCCCcEEEEECCCCceee
Confidence 4689999999999999999999999999999999999999654 36999999999999878899999999999999
Q ss_pred eeEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEEEcCCCcEEEcCHHHHHHHH
Q 031203 81 HKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKAS-EIEVGVVSKENPEFRVLSIEEIDEHL 157 (164)
Q Consensus 81 ~~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii~~~~~~~k~l~~~ei~~~l 157 (164)
++++|+|+|+..++++|++.| +++||.+||++++++||..+.++|..++ +++|++|+++|.+++.+++|||+++.
T Consensus 123 ~~~~a~G~g~~~a~~~L~~~~--~~~~~~~ea~~l~~~al~~a~~rD~~sg~~i~v~vi~~~G~~~~~~~~d~~~~~~ 198 (202)
T d1iruh_ 123 QSFAIGGSGSSYIYGYVDATY--REGMTKEECLQFTANALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIPKFA 198 (202)
T ss_dssp CSEEEESGGGGGGHHHHHHHC--CTTCCHHHHHHHHHHHHHHHHHHBTTCCSCEEEEEEETTEEEEEEECGGGSCCCC
T ss_pred cceeEEeCCHHHHHHHHHHhh--ccCCcHHHHHHHHHHHHHHHHhhCCCCCCCEEEEEEeCCCeEEEEcCHHHhhhhh
Confidence 999999999999999999998 6899999999999999999999999887 89999999998777889999887653
No 25
>d1ryp2_ d.153.1.4 (2:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.4e-33 Score=215.84 Aligned_cols=152 Identities=13% Similarity=0.206 Sum_probs=139.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHh-----CCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCc
Q 031203 2 TADARTLVQQARYEAAEFRFKY-----GYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAG 76 (164)
Q Consensus 2 ~~D~~~l~~~~~~~~~~~~~~~-----~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G 76 (164)
.+|++.|.++++.++..|++++ +.+++++.+++++++.+ |+++.++|||+|++||+|||+.++|+||.+||+|
T Consensus 57 ~~D~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~--y~~~~~~~P~~~~~liaG~d~~g~~~ly~~d~~G 134 (233)
T d1ryp2_ 57 ISDMQHIERLLKDLVTENAYDNPLADAEEALEPSYIFEYLATVM--YQRRSKMNPLWNAIIVAGVQSNGDQFLRYVNLLG 134 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTTTTTTSCCHHHHHHHHHHHH--HHHHHTTCCCCEEEEEEEECTTSCEEEEEEETTC
T ss_pred chHHHHHHHHHHHHHHHHHHhhCCCCCCcccCHHHHHHHHHHHH--HhhccccCCceeEEEEEEEcCCCCeEEEEEcCCC
Confidence 5899999999999999999987 56789999999999987 8888889999999999999986778999999999
Q ss_pred ceeeeeEEeecCChHHHHHHHHHhhcC---CCCCCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEEEcCCCcEEEcCHHH
Q 031203 77 HFFGHKATSAGLKEQEAINFLEKKMKN---DPAFTFQETVQTAISTLQSVLQEDFKAS-EIEVGVVSKENPEFRVLSIEE 152 (164)
Q Consensus 77 ~~~~~~~~aiG~~s~~~~~~Le~~~~~---~~~ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii~~~~~~~k~l~~~e 152 (164)
++.+++++|+|+|++.++++|++.|+. .|+||.|||++++++||..+++||+.++ +++|++|+++++ ++++.+++
T Consensus 135 ~~~~~~~~a~G~g~~~a~~~Le~~~~~~~~~~~ms~eeA~~l~~~al~~~~~rD~~sg~~i~i~~itkd~g-~~~~~~~~ 213 (233)
T d1ryp2_ 135 VTYSSPTLATGFGAHMANPLLRKVVDRESDIPKTTVQVAEEAIVNAMRVLYYRDARSSRNFSLAIIDKNTG-LTFKKNLQ 213 (233)
T ss_dssp CEECCSEEECTHHHHHHHHHHTTTCCSGGGGGGCCHHHHHHHHHHHHHHHHHHBTTCCSEEEEEEEETTTE-EEEEEEEE
T ss_pred cEEeeeeEEecCccHHHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHHHHhcccCCCCEEEEEEECCCC-EEECChhc
Confidence 999999999999999999999999853 2789999999999999999999999888 899999999875 99999988
Q ss_pred HHHH
Q 031203 153 IDEH 156 (164)
Q Consensus 153 i~~~ 156 (164)
|+..
T Consensus 214 ie~~ 217 (233)
T d1ryp2_ 214 VENM 217 (233)
T ss_dssp CCSC
T ss_pred chhh
Confidence 8654
No 26
>d1irui_ d.153.1.4 (I:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.98 E-value=5.4e-32 Score=205.34 Aligned_cols=142 Identities=18% Similarity=0.214 Sum_probs=131.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceeee
Q 031203 2 TADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGH 81 (164)
Q Consensus 2 ~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~~ 81 (164)
.+|++.++++++.+++.|++++|++++++.++++++++++. ..+||++++|+||||+ +||+||.+||+|++.++
T Consensus 49 ~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~y~-----~~~p~~~~~ivaG~D~-~g~~L~~id~~G~~~~~ 122 (220)
T d1irui_ 49 AADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFR-----YRGYIGAALVLGGVDV-TGPHLYSIYPHGSTDKL 122 (220)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHHHH-----TTTCSCEEEEEEEECS-SCEEEEEECTTSCEEEC
T ss_pred cHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhhhh-----cccccceeEEEEEEeC-CCcEEEEEeCCCcEEEe
Confidence 58999999999999999999999999999999999998832 3579999999999998 78999999999999999
Q ss_pred eEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEEEcCCCcEEEcCHHHH
Q 031203 82 KATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKAS-EIEVGVVSKENPEFRVLSIEEI 153 (164)
Q Consensus 82 ~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii~~~~~~~k~l~~~ei 153 (164)
+++|+|+|+..++++|++.| +++||++||++++++||..+.++|..++ +++|++|++++ ++++.|.++
T Consensus 123 ~~~a~Gsgs~~a~~~L~~~~--~~~~s~~ea~~l~~~al~~~~~~D~~sg~~i~i~vitkdg--~~~~~~~~~ 191 (220)
T d1irui_ 123 PYVTMGSGSLAAMAVFEDKF--RPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNK--LDFLRPYTV 191 (220)
T ss_dssp SEEEESTTHHHHHHHHHHSC--CTTCCHHHHHTHHHHHHHHHHHHCTTCCSCEEEEEEETTE--EECCSEEEC
T ss_pred eEEEEccccHHHHHHHHHhc--ccCCCHHHHHHHHHHHHHHhhccCCCCCCcEEEEEEECCC--eEEeCcccc
Confidence 99999999999999999998 6899999999999999999999998877 89999999985 677776654
No 27
>d1q5qh_ d.153.1.4 (H:) Proteasome beta subunit (catalytic) {Rhodococcus erythropolis [TaxId: 1833]}
Probab=99.97 E-value=6.8e-31 Score=199.18 Aligned_cols=157 Identities=20% Similarity=0.163 Sum_probs=143.1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEc-----CCCCCeEEEeCCC
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID-----EECGPRLFKCDPA 75 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d-----~~~gp~Ly~~dp~ 75 (164)
+.+|++.+.++++.+++.|++.++.+++++.+++++++.+|.|++ ...||+++.++++|++ ..++|+||.+||+
T Consensus 48 ~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~g~d~~~~~~l~~~d~~ 126 (224)
T d1q5qh_ 48 TAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLG-AAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVV 126 (224)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHTTHH-HHTTTCCEEEEEEEECTTCSSTTSCEEEEEECTT
T ss_pred cchHHHHHHHHHHHHhHHHHHhhCCCccHHHHHHHHHHHHHHhhc-ccccCccceeeEEEeecccccccCCceEEEEEcc
Confidence 368999999999999999999999999999999999999999876 4578999999988876 3468999999999
Q ss_pred cceeee--eEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCCe--------EEEEEEEcCCCcE
Q 031203 76 GHFFGH--KATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASE--------IEVGVVSKENPEF 145 (164)
Q Consensus 76 G~~~~~--~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~~--------iei~ii~~~~~~~ 145 (164)
|+..++ +++|+|+|+..++++||++| +++||.+||++++++||..+.++|..|++ +++.++++++ |
T Consensus 127 G~~~~~~~~~~a~GsG~~~a~~~Le~~~--~~~mt~~ea~~l~~~al~~a~~rD~~SGg~~~~~~~~~~~~~i~~~g--~ 202 (224)
T d1q5qh_ 127 GGRYEERAGYHAVGSGSLFAKSALKKIY--SPDSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQAG--A 202 (224)
T ss_dssp SCEEECCSSEEEESTTHHHHHHHHHHHC--CTTCCHHHHHHHHHHHHHHHHHHCTTTCCCBTTTTBCCEEEEEETTE--E
T ss_pred CcEEEeccceeeecCccHHHHHHHHHhh--cccCCHHHHHHHHHHHHHHHHhhccccCCcccccccceEEEEEeCCc--E
Confidence 998776 57999999999999999998 68999999999999999999999998873 7899999885 9
Q ss_pred EEcCHHHHHHHHHHhhc
Q 031203 146 RVLSIEEIDEHLTAISE 162 (164)
Q Consensus 146 k~l~~~ei~~~l~~~~~ 162 (164)
++++++||++++.++.+
T Consensus 203 ~~l~~~ei~~~~~~~~~ 219 (224)
T d1q5qh_ 203 VHVSEETTSELARRIVA 219 (224)
T ss_dssp EECCHHHHHHHHHHHHH
T ss_pred EEcCHHHHHHHHHHHHH
Confidence 99999999999999874
No 28
>d1rypi_ d.153.1.4 (I:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.97 E-value=3.3e-31 Score=201.35 Aligned_cols=140 Identities=19% Similarity=0.189 Sum_probs=128.5
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFG 80 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~ 80 (164)
+.+|++.|.++++.++..|++.++.++++..+++++++.+. ...|||++++|+||+|+ +||+||.+||+|++.+
T Consensus 48 ~~aD~~~l~~~l~~~~~~~~~~~~~~~~v~~~a~~l~~~~~-----~~~~p~~~~~l~aG~d~-~g~~Ly~id~~G~~~~ 121 (222)
T d1rypi_ 48 TAADTEAVTQLIGSNIELHSLYTSREPRVVSALQMLKQHLF-----KYQGHIGAYLIVAGVDP-TGSHLFSIHAHGSTDV 121 (222)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHH-----HTTTCSCEEEEEEEEET-TEEEEEEECTTSCEEE
T ss_pred cchHHHHHHHHHHHHHHHhhhhhCCCCcHHHHHHHHHHHHH-----hhhhccceeEEEEEEcC-CCcEEEEEecCcceEE
Confidence 36899999999999999999999999999999999998872 23579999999999998 8999999999999999
Q ss_pred eeEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEEEcCCCcEEEcC
Q 031203 81 HKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKAS-EIEVGVVSKENPEFRVLS 149 (164)
Q Consensus 81 ~~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii~~~~~~~k~l~ 149 (164)
++++|+|+|++.++++|+++| +++||++||++++++||..+.++|..++ +++|+++++++. .+.+.
T Consensus 122 ~~~~a~Gsg~~~a~~~Le~~~--k~~ms~eea~~l~~~al~~a~~~D~~sg~~i~i~vi~~~~~-~~~~~ 188 (222)
T d1rypi_ 122 GYYLSLGSGSLAAMAVLESHW--KQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVMEIGKD-AEYLR 188 (222)
T ss_dssp CSEEEESTTHHHHHHHHHHHC--CSSCCHHHHHHHHHHHHHHHHHHCTTCCSCEEEEEEETTSC-EEEEE
T ss_pred eeEEEECCCcHHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEEcCCC-eEEec
Confidence 999999999999999999998 6899999999999999999999999887 899999998764 44443
No 29
>d1iru2_ d.153.1.4 (2:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.97 E-value=1.2e-31 Score=202.97 Aligned_cols=147 Identities=14% Similarity=0.163 Sum_probs=134.8
Q ss_pred CchHHHHHHHHHHHHHHHHHH-hCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceee
Q 031203 2 TADARTLVQQARYEAAEFRFK-YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFG 80 (164)
Q Consensus 2 ~~D~~~l~~~~~~~~~~~~~~-~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~ 80 (164)
.+|++.|++.++.++..+++. ++.+++|+.+++++++.+ |+++.+.|||++++|++|+|+ ++|+||.+||+|++.+
T Consensus 57 ~aD~~~l~~~~~~~~~~~~~~~~~~~~~v~~~a~~l~~~~--y~~~~~~~p~~~~~li~G~d~-~~~~l~~~D~~G~~~~ 133 (217)
T d1iru2_ 57 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAM--YSRRSKMNPLWNTMVIGGYAD-GESFLGYVDMLGVAYE 133 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSSCCCCHHHHHHHHHHHH--HHHHHTTCCCCEEEEEEEEET-TEEEEEEECSSCCEEE
T ss_pred cHHHHHHHHHHHHHHHHhhhhcCCCCCCHHHHHHHHHHHH--HHhccccCcccceEEEEEEcC-CCcEEEEEecCceeEe
Confidence 589999999999999988765 469999999999999977 888888999999999999997 7999999999999999
Q ss_pred eeEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEEEcCCCcEEEcCHHHH
Q 031203 81 HKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKAS-EIEVGVVSKENPEFRVLSIEEI 153 (164)
Q Consensus 81 ~~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii~~~~~~~k~l~~~ei 153 (164)
++++|+|+|+..++++|++.|++.++||.+||++++++||..+.++|..++ +++|++|+++| +++..|.++
T Consensus 134 ~~~~a~G~g~~~a~~~Le~~~~~~~~lt~~ea~~l~~~al~~a~~rd~~sg~~i~i~vi~~~G--~~~~~~~~~ 205 (217)
T d1iru2_ 134 APSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDARSYNRFQTATVTEKG--VEIEGPLST 205 (217)
T ss_dssp CSEEECTTHHHHTHHHHHHHHTSCSCCCHHHHHHHHHHHHHHHHHHBTTCCSCEEEEEEETTE--EEEEEEECC
T ss_pred eeEEeccCcHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHhcCcCCCcEEEEEEeCCC--EEEcCCeec
Confidence 999999999999999999998777999999999999999999999998887 89999999986 566666544
No 30
>d1rypj_ d.153.1.4 (J:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.97 E-value=4.6e-30 Score=192.13 Aligned_cols=137 Identities=17% Similarity=0.232 Sum_probs=126.0
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCC-CeEEEeCCCccee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECG-PRLFKCDPAGHFF 79 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~g-p~Ly~~dp~G~~~ 79 (164)
+++|++.|.++++.+++.|+++++.+++++.+++++++.+|.+ ..+||+|+++++|||+++| |+||.+||+|++.
T Consensus 55 ~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~l~~~----~~~p~~v~~li~G~d~~~g~~~L~~~D~~G~~~ 130 (204)
T d1rypj_ 55 LATDVTTLNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYER----RFGPYFVGPVVAGINSKSGKPFIAGFDLIGCID 130 (204)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHTT----TTSCCCEEEEEEEECTTTCCEEEEEECTTCCEE
T ss_pred cchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHhh----cccceeeeEEEEEEecCCCcceEEEeCCCCccc
Confidence 3689999999999999999999999999999999999998543 3579999999999997554 8999999999998
Q ss_pred eee-EEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEEEcCCC
Q 031203 80 GHK-ATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKAS-EIEVGVVSKENP 143 (164)
Q Consensus 80 ~~~-~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii~~~~~ 143 (164)
+++ ++++|+|+..++++|++.| +++||.+||++++++||..+.++|+.++ +++|++|++++.
T Consensus 131 ~~~~~~~~G~g~~~a~~~l~~~~--~~~ms~~ea~~l~~~al~~a~~~d~~sg~~~~v~ii~kdg~ 194 (204)
T d1rypj_ 131 EAKDFIVSGTASDQLFGMCESLY--EPNLEPEDLFETISQALLNAADRDALSGWGAVVYIIKKDEV 194 (204)
T ss_dssp CCSSEEEEETTHHHHHHHHHHHC--CSSCCHHHHHHHHHHHHHHHHTTBTTSCSCEEEEEEESSCE
T ss_pred cccCcEEeecchHHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHhcCccCCeEEEEEEECCce
Confidence 875 8899999999999999998 6899999999999999999999998877 899999999974
No 31
>d1ryp1_ d.153.1.4 (1:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.97 E-value=1.2e-29 Score=192.25 Aligned_cols=139 Identities=16% Similarity=0.308 Sum_probs=124.9
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCccee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYG-YEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFF 79 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~-~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~ 79 (164)
+.+|++.|+++++.+++.|++.++ .++++..++++++..+ ++.+.|||+|+++|+|||++++|+||.+||+|++.
T Consensus 57 ~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~p~~~~~li~G~d~~~~~~Ly~~D~~G~~~ 132 (222)
T d1ryp1_ 57 FAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLL----YGKRFFPYYVHTIIAGLDEDGKGAVYSFDPVGSYE 132 (222)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHH----HTTTTSCCCEEEEEEEECTTSCEEEEEECTTSCEE
T ss_pred ChHHHHHHHHHHHHHhhhhhhhcCCCCCcHHHHHHHHHHHH----HhhhhhhheeeeeEEEEeCCCCeEEEEECCCcEEE
Confidence 468999999999999999999986 5678888887776655 45578999999999999987779999999999999
Q ss_pred eeeEEeecCChHHHHHHHHHhhcCC---------------CCCCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEEEcCCC
Q 031203 80 GHKATSAGLKEQEAINFLEKKMKND---------------PAFTFQETVQTAISTLQSVLQEDFKAS-EIEVGVVSKENP 143 (164)
Q Consensus 80 ~~~~~aiG~~s~~~~~~Le~~~~~~---------------~~ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii~~~~~ 143 (164)
+++++|+|+|++.++++||++|+.. ++||.+||++++++||..+.++|+.++ +++|++|+++|.
T Consensus 133 ~~~~~a~G~g~~~a~~~Le~~~~~~~~~~~~~~~~~~~~~~~lt~~ea~~l~~~al~~a~~rd~~sg~~v~v~iitkdGv 212 (222)
T d1ryp1_ 133 REQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIVTKDGV 212 (222)
T ss_dssp EESEEEEETTHHHHHHHHHHHTSCTTCBCTTSTTCSBCCCCCCCHHHHHHHHHHHHHHHHHHBTTCCSEEEEEEEETTEE
T ss_pred EeceEEEcccHHHHHHHHHHhhccccccCcccchhhhcccccccHHHHHHHHHHHHHHHHHhcccCCCcEEEEEEeCCCE
Confidence 9999999999999999999998522 689999999999999999999999988 799999999864
No 32
>d1iruj_ d.153.1.4 (J:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.97 E-value=2.6e-29 Score=188.36 Aligned_cols=142 Identities=15% Similarity=0.216 Sum_probs=127.8
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCC-CCeEEEeCCCccee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEEC-GPRLFKCDPAGHFF 79 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~-gp~Ly~~dp~G~~~ 79 (164)
+.+|++.|++.++.+++.|++.++.+++|+.+++++++.+|.+ +++||+|++||||||+++ +|.+|.+||+|...
T Consensus 55 ~~aD~~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~----~~~p~~~~~lvaG~D~~~~~~~~~~~d~~g~~~ 130 (204)
T d1iruj_ 55 LATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEK----RFGPYYTEPVIAGLDPKTFKPFICSLDLIGCPM 130 (204)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHTT----TTSCCSCCCEEEEECTTSCCEEEEEECTTCCEE
T ss_pred CchHHHHHHHHHHHhhhhhhhhcccccchHHHHHHHHHHHHHh----hhccceeEEEEEEEcCCCCceEEEEecCCCcee
Confidence 3689999999999999999999999999999999999998543 467999999999999753 57899999999987
Q ss_pred ee-eEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEEEcCCCcEEEc
Q 031203 80 GH-KATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKAS-EIEVGVVSKENPEFRVL 148 (164)
Q Consensus 80 ~~-~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii~~~~~~~k~l 148 (164)
.+ .++++|+|++.++++|++.| +++||.+||++++++||..+.++|..++ +++|++|++++...+.+
T Consensus 131 ~~~~~~~~G~g~~~~~~~l~~~~--~~~ms~~ea~~l~~~al~~a~~rd~~sg~~~~v~ii~k~gi~~~~~ 199 (204)
T d1iruj_ 131 VTDDFVVSGTCAEQMYGMCESLW--EPNMDPDHLFETISQAMLNAVDRDAVSGMGVIVHIIEKDKITTRTL 199 (204)
T ss_dssp ECSSEEEEETTHHHHHHHHHHHC--CSSCCHHHHHHHHHHHHHHHGGGBTTSCSCEEEEEEESSBEEEEEB
T ss_pred eecceEEechhHHHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHhhcccCCCcEEEEEEeCCCEEEEEE
Confidence 76 57999999999999999998 6889999999999999999999999888 89999999997544433
No 33
>d1iruk_ d.153.1.4 (K:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.96 E-value=8.3e-29 Score=183.06 Aligned_cols=145 Identities=14% Similarity=0.208 Sum_probs=133.8
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceee
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFG 80 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~ 80 (164)
+.+|++.+.++++.+++.|+..++.+++++.+++.+++..+.+ ....+|++++++++|||...+|+||.+||+|.+..
T Consensus 49 ~~aD~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~aG~d~~~~~~l~~~~~~g~~~~ 126 (199)
T d1iruk_ 49 EAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADC--LRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAK 126 (199)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHH--HTSSSCCCEEEEEEEEETTTEEEEEEECTTCCEEE
T ss_pred cchHHHHHHHHHHHHhhhhhhhcCCcCcHHHHHHHHHHHHHHH--hhccCCcceeeeecceeccCCceEEeecccceEEe
Confidence 3689999999999999999999999999999999999988544 45678999999999999877899999999999999
Q ss_pred eeEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEEEcCCCcEEEcCHH
Q 031203 81 HKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKAS-EIEVGVVSKENPEFRVLSIE 151 (164)
Q Consensus 81 ~~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii~~~~~~~k~l~~~ 151 (164)
++++++|+|++.++++|++.| +++||++||++++++||..+.++|..++ +++|++|+++| ++.+++.
T Consensus 127 ~~~~a~G~gs~~a~~~l~~~~--~~~~~~~ea~~l~~~al~~~~~~d~~sg~~~~v~vv~~~g--~~~~~~~ 194 (199)
T d1iruk_ 127 APFAAHGYGAFLTLSILDRYY--TPTISRERAVELLRKCLEELQKRFILNLPTFSVRIIDKNG--IHDLDNI 194 (199)
T ss_dssp CSEEEESHHHHHHHHHHHHHC--CTTCCHHHHHHHHHHHHHHHHHTBCBCCCCEEEEEEETTE--EECCCCB
T ss_pred eeeeeecccchhhhHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHhcCCcCCceEEEEEcCCC--eEEcCCc
Confidence 999999999999999999998 6899999999999999999999998887 89999999986 7776653
No 34
>d1iru1_ d.153.1.4 (1:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.95 E-value=4.7e-27 Score=175.94 Aligned_cols=138 Identities=14% Similarity=0.215 Sum_probs=128.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceeee
Q 031203 2 TADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGH 81 (164)
Q Consensus 2 ~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~~ 81 (164)
.+|++.+.++++.+++.|++.++.+++++.++++++..+|.+ ..+|++++++++|||..++|.+|.+||.|++..+
T Consensus 58 ~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~d~~~~~~l~~~d~~g~~~~~ 133 (213)
T d1iru1_ 58 HGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSR----RFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRD 133 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHTT----TTSCCCEEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred cchHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHH----HhhhcccccceEEEecCCCcEEEecCCcceeeec
Confidence 589999999999999999999999999999999999998765 3569999999999999788999999999999999
Q ss_pred eEEeecCChHHHHHHHHHhhcC-------CCCCCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEEEcCCC
Q 031203 82 KATSAGLKEQEAINFLEKKMKN-------DPAFTFQETVQTAISTLQSVLQEDFKAS-EIEVGVVSKENP 143 (164)
Q Consensus 82 ~~~aiG~~s~~~~~~Le~~~~~-------~~~ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii~~~~~ 143 (164)
+++++|+|+..+++.|++.|++ .++||++||++++++||..+.++|+.++ +++|++|+++|.
T Consensus 134 ~~~a~G~g~~~a~~~l~~~~~~~~~~~~~~~~~s~~ea~~~~~~~l~~~~~~d~~sg~~~~v~~i~k~G~ 203 (213)
T d1iru1_ 134 SFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 203 (213)
T ss_dssp SEEEEETTHHHHHHHHHHHTTCCSCSSCCCCCCCHHHHHHHHHHHHHHHHHHBTTSCSEEEEEEEETTEE
T ss_pred CeeeecCccHHHHHHHHHhhcccchhcccccCCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeCCCE
Confidence 9999999999999999998753 3789999999999999999999999888 799999999874
No 35
>d2z3ba1 d.153.1.4 (A:1-180) HslV (ClpQ) protease {Bacillus subtilis [TaxId: 1423]}
Probab=99.41 E-value=2.3e-14 Score=103.88 Aligned_cols=122 Identities=13% Similarity=-0.036 Sum_probs=81.6
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccceeeEEEEEcCCCCCeEEEeCCCcceeeee
Q 031203 3 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHK 82 (164)
Q Consensus 3 ~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G~~~~~~ 82 (164)
+|.+.+.+..+.+...+ ..-....+.............+....++.+....+|++. .++.++..+++|
T Consensus 57 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------ 124 (180)
T d2z3ba1 57 ADAFTLFEKFEAKLEEY-----NGNLKRAAVELAKEWRSDKVLRKLEAMLIVMNQDTLLLV-SGTGEVIEPDDG------ 124 (180)
T ss_dssp HHHHHHHHHHHHHHHHT-----TTCHHHHHHHHHHHHHHCTTGGGCCCCEEEECSSCEEEE-CTTCCEECCSSS------
T ss_pred HHHHHHHHHHHHHHHhh-----ccccchhHHHHHHHHhHHHHHHHhhcceeeeeccccccc-cCCceeeccccc------
Confidence 45666666555544332 222222222222222222222333344555555566665 566777666665
Q ss_pred EEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEE
Q 031203 83 ATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKAS-EIEVGVV 138 (164)
Q Consensus 83 ~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii 138 (164)
+.|+|+|+..|++.|++.| +++||.+||++++.+||+.|.++|+.++ +++|-+|
T Consensus 125 ~~a~GSGs~~A~g~l~~~~--~~~~s~~eA~~l~~~Al~~A~e~dvyT~~~~~~~~i 179 (180)
T d2z3ba1 125 ILAIGSGGNYALAAGRALK--KHAGESMSASEIARAALETAGEICVYTNDQIILEEL 179 (180)
T ss_dssp EEEESTTHHHHHHHHHHHH--HHHGGGCCHHHHHHHHHHHHHHHCTTCCSCCEEEEE
T ss_pred EEEEcCchHHHHHHHHHHh--hcCCCccCHHHHHHHHHHHHHhhcEEcCCcEEEEEe
Confidence 7899999999999999999 5789999999999999999999999987 7887765
No 36
>d1m4ya_ d.153.1.4 (A:) HslV (ClpQ) protease {Thermotoga maritima [TaxId: 2336]}
Probab=99.23 E-value=5.8e-12 Score=89.99 Aligned_cols=80 Identities=9% Similarity=0.025 Sum_probs=66.5
Q ss_pred ceeeEEEEEcCCCCCeEEEeCCCcceeeeeEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCC-
Q 031203 53 GVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKAS- 131 (164)
Q Consensus 53 gv~~iiaG~d~~~gp~Ly~~dp~G~~~~~~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~- 131 (164)
....++.+++. .+|.++..|+.|......+.|+|+|+..|++.|+.+++ +++++ |.+++++||..|.++|+.++
T Consensus 90 ~~~~~~~~~~~-~~~~~~~~d~~g~~~~~~~~a~GSGs~~A~g~l~~~~~-~~~~~---a~el~~~Ai~~A~e~dvyTg~ 164 (171)
T d1m4ya_ 90 RLEALLLVADK-ENIFIISGNGEVIQPDDDAAAIGSGGPYALAAAKALLR-NTDLS---AREIVEKAMTIAGEICIYTNQ 164 (171)
T ss_dssp GCCCEEEEECS-SCEEEECTTSCEECCSSSEEEESTTHHHHHHHHHHHHH-HCCCC---HHHHHHHHHHHHHHHCTTCCS
T ss_pred ccccccceecC-CcceEEecCCceeeecCCEEEEcchHHHHHHHHHhhcc-CCCCC---HHHHHHHHHHHHHhhceEcCC
Confidence 33445555666 78999999999999999999999999999999999774 35665 66789999999999999988
Q ss_pred eEEEEE
Q 031203 132 EIEVGV 137 (164)
Q Consensus 132 ~iei~i 137 (164)
+++|-.
T Consensus 165 ~~~i~~ 170 (171)
T d1m4ya_ 165 NIVIEE 170 (171)
T ss_dssp CCEEEE
T ss_pred cEEEEE
Confidence 787754
No 37
>d1g3ka_ d.153.1.4 (A:) HslV (ClpQ) protease {Haemophilus influenzae [TaxId: 727]}
Probab=99.15 E-value=6.4e-11 Score=84.61 Aligned_cols=80 Identities=10% Similarity=-0.036 Sum_probs=67.5
Q ss_pred eeEEEEEcCCCCCeEEEeCCCcceeeeeEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCC-eE
Q 031203 55 VAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKAS-EI 133 (164)
Q Consensus 55 ~~iiaG~d~~~gp~Ly~~dp~G~~~~~~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~-~i 133 (164)
...+.|+|..++|.++..|+.|.+.+..+.|+|+|+..|.+.|+.+++ ++.++|.++|++||..|.++|+.++ ++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~GSGs~~A~~~l~~~~~----~~~~~A~ela~~Ai~~Aae~dvyTgd~~ 167 (173)
T d1g3ka_ 92 EAMLIVADEKESLIITGIGDVVQPEEDQILAIGSGGNYALSAARALVE----NTELSAHEIVEKSLRIAGDICVFTNTNF 167 (173)
T ss_dssp CCEEEEECSSCEEEEETTTEEECCCTTCEEEESTTHHHHHHHHHHHHH----HCCCCHHHHHHHHHHHHHHHCTTCCSCC
T ss_pred ccccccccCCCcceecccCceEEecCCCEEEecchHHHHHHHHHHhhh----cCCCCHHHHHHHHHHHHHhhcEEcCCcE
Confidence 344445566588999999999999999999999999999999999873 4556788899999999999999988 78
Q ss_pred EEEEE
Q 031203 134 EVGVV 138 (164)
Q Consensus 134 ei~ii 138 (164)
+|-.|
T Consensus 168 ~i~~~ 172 (173)
T d1g3ka_ 168 TIEEL 172 (173)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 77654
No 38
>d1cuka1 a.5.1.1 (A:156-203) DNA helicase RuvA subunit, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=85.32 E-value=0.34 Score=26.04 Aligned_cols=34 Identities=24% Similarity=0.325 Sum_probs=28.8
Q ss_pred eecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHH
Q 031203 85 SAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120 (164)
Q Consensus 85 aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al 120 (164)
+.|+....+...+.+.. .+++|.|+.|+.|++++
T Consensus 14 ~LGY~~~ea~~av~~i~--~~~~s~E~lIk~ALk~m 47 (48)
T d1cuka1 14 ALGYKPQEASRMVSKIA--RPDASSETLIREALRAA 47 (48)
T ss_dssp HHTCCHHHHHHHHHHSC--CSSCCHHHHHHHHHHTT
T ss_pred HcCCCHHHHHHHHHHhc--CCCCCHHHHHHHHHHHh
Confidence 56899999999999875 68899999999888754
No 39
>d1l0oc_ a.4.13.2 (C:) SigmaF {Bacillus stearothermophilus [TaxId: 1422]}
Probab=76.47 E-value=3.2 Score=22.57 Aligned_cols=33 Identities=15% Similarity=0.172 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 031203 5 ARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIA 37 (164)
Q Consensus 5 ~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls 37 (164)
.+.+.++++.....+..+.|++++++.+|..+.
T Consensus 10 ~~e~~~ki~~~~~~l~q~lgRePT~~EiA~~l~ 42 (57)
T d1l0oc_ 10 LKEMGNKIRKAKDELSKTRGRAPTVTEIADHLG 42 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCBHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHC
Confidence 356778888888999999999999999998764
No 40
>d2hc5a1 d.352.1.1 (A:1-109) Hypothetical protein YvyC {Bacillus subtilis [TaxId: 1423]}
Probab=70.81 E-value=5.9 Score=24.52 Aligned_cols=33 Identities=18% Similarity=0.211 Sum_probs=26.7
Q ss_pred CCeEEEEEEEcCCC-cEEEcCHHHHHHHHHHhhc
Q 031203 130 ASEIEVGVVSKENP-EFRVLSIEEIDEHLTAISE 162 (164)
Q Consensus 130 ~~~iei~ii~~~~~-~~k~l~~~ei~~~l~~~~~ 162 (164)
++.+-|.|++++++ .+|.++|+++-.+..+|.+
T Consensus 66 ~~~~vVkVvD~~T~eVIRqIP~Ee~l~l~~~i~e 99 (109)
T d2hc5a1 66 LNEYYVKVIEDSTNEVIREIPPKRWLDFYAAMTE 99 (109)
T ss_dssp TTEEEEEEEETTTTEEEEEECHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCeeeeeCCCHHHHHHHHHHHH
Confidence 34577999998887 5789999999998887753
No 41
>d1rp3a1 a.4.13.1 (A:87-163) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=65.30 E-value=7.7 Score=21.98 Aligned_cols=40 Identities=15% Similarity=0.103 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh
Q 031203 5 ARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYT 44 (164)
Q Consensus 5 ~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt 44 (164)
.+...+++......+....|++++.+.+|..+.--...|.
T Consensus 5 ~r~~~~ki~~a~~~L~~~lGR~Pt~~EiA~~lg~s~~e~~ 44 (77)
T d1rp3a1 5 VREKERRIKEVVEKLKEKLGREPTDEEVAKELGISTEELF 44 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCcCCCHHHHHHHHCcCHHHHH
Confidence 4566778888888889999999999999998875554443
No 42
>d1wwxa1 a.4.5.21 (A:8-101) E74-like factor 5 ese-2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.35 E-value=5.5 Score=24.12 Aligned_cols=25 Identities=20% Similarity=0.254 Sum_probs=21.6
Q ss_pred EEEEEcCCCcEEEcCHHHHHHHHHH
Q 031203 135 VGVVSKENPEFRVLSIEEIDEHLTA 159 (164)
Q Consensus 135 i~ii~~~~~~~k~l~~~ei~~~l~~ 159 (164)
|.+.+++.+.|++++|++|.++...
T Consensus 22 I~Wt~k~~g~Fkl~d~~~VA~lWG~ 46 (94)
T d1wwxa1 22 LEWEDREQGIFRVVKSEALAKMWGQ 46 (94)
T ss_dssp CEEEETTTTEEECSCHHHHHHHHHH
T ss_pred EEEEcCCCcEEEEcCHHHHHHHHHh
Confidence 8899988778999999999988654
No 43
>d1yo5c1 a.4.5.21 (C:247-334) Sam pointed domain containing ets transcription SPDEF {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.12 E-value=5.4 Score=23.87 Aligned_cols=25 Identities=12% Similarity=0.197 Sum_probs=21.4
Q ss_pred EEEEEcCCCcEEEcCHHHHHHHHHH
Q 031203 135 VGVVSKENPEFRVLSIEEIDEHLTA 159 (164)
Q Consensus 135 i~ii~~~~~~~k~l~~~ei~~~l~~ 159 (164)
|.+.+++.+.|+++++++|.+...+
T Consensus 23 I~Wt~~~~g~Fkl~~~~~VA~lWG~ 47 (88)
T d1yo5c1 23 IRWLNKEKGIFKIEDSAQVARLWGI 47 (88)
T ss_dssp EEEEETTTTEEEESCHHHHHHHHHH
T ss_pred eEEECCCCceEEecCHHHHHHHHHH
Confidence 6788888778999999999988654
No 44
>d1duxc_ a.4.5.21 (C:) Elk-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=61.89 E-value=3.5 Score=24.63 Aligned_cols=25 Identities=20% Similarity=0.393 Sum_probs=21.2
Q ss_pred EEEEEcCCCcEEEcCHHHHHHHHHH
Q 031203 135 VGVVSKENPEFRVLSIEEIDEHLTA 159 (164)
Q Consensus 135 i~ii~~~~~~~k~l~~~ei~~~l~~ 159 (164)
|.+.+++++.|+++++++|.+...+
T Consensus 20 I~Wt~k~~g~Fklv~~~~VA~lWG~ 44 (86)
T d1duxc_ 20 ISWTSRDGGEFKLVDAEEVARLWGL 44 (86)
T ss_dssp CEEEETTTTEEECTTHHHHHHHHHH
T ss_pred eEeccCCCCEEEecCHHHHHHHHHh
Confidence 5888987778999999999988654
No 45
>d1wmha_ d.15.2.2 (A:) Protein kinase C, iota type {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.80 E-value=18 Score=21.12 Aligned_cols=53 Identities=13% Similarity=0.166 Sum_probs=39.2
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhccCCCCeEEEEEEEcCCCcEEEcCHHHHHHHHHHhh
Q 031203 104 DPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAIS 161 (164)
Q Consensus 104 ~~~ls~eea~~l~~~al~~~~~~d~~~~~iei~ii~~~~~~~k~l~~~ei~~~l~~~~ 161 (164)
.+.++.++.-+.++...+-. ....+.+.||+.+|.-..+-++.|+++.++-.+
T Consensus 18 ~~~it~e~l~~evr~~C~f~-----~~q~fT~KWiDeEGDPCTISSQmEL~EA~RLye 70 (83)
T d1wmha_ 18 EPSISFEGLCNEVRDMCSFD-----NEQLFTMKWIDEEGDPCTVSSQLELEEAFRLYE 70 (83)
T ss_dssp CTTCCHHHHHHHHHHHTTCC-----TTCCCEEEEECTTSCEEECCSHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHhCCC-----cCCcEEEEEEcCCCCceeeecHHHHHHHHHHHH
Confidence 46788888877765543211 222699999999986699999999999887655
No 46
>d1ku2a1 a.4.13.1 (A:273-332) Sigma factor SigA {Thermus aquaticus [TaxId: 271]}
Probab=40.57 E-value=24 Score=18.95 Aligned_cols=31 Identities=13% Similarity=0.170 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCHHHHHHHH
Q 031203 6 RTLVQQARYEAAEFRFKYGYEMPVDVLAKWI 36 (164)
Q Consensus 6 ~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~l 36 (164)
...+++++.......-..|++++++.+|..+
T Consensus 8 ~e~i~rv~r~~~~l~qe~gRePt~eEiA~~l 38 (60)
T d1ku2a1 8 VETINKLSRTARQLQQELGREPSYEEIAEAM 38 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 3456677778888888999999999999876
No 47
>d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]}
Probab=36.78 E-value=16 Score=25.96 Aligned_cols=39 Identities=15% Similarity=0.249 Sum_probs=33.9
Q ss_pred eecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhc
Q 031203 85 SAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQE 126 (164)
Q Consensus 85 aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~ 126 (164)
..|.|..++-.++-... .+.++++|++.|...+..++.+
T Consensus 219 ~~GtGD~fsa~l~a~l~---~G~~l~~A~~~A~~~v~~~l~~ 257 (288)
T d1vi9a_ 219 PVGVGDVTSGLLLVKLL---QGATLQEALEHVTAAVYEIMVT 257 (288)
T ss_dssp CSCHHHHHHHHHHHHHH---TTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCChhHHHHHHHHHHHH---cCCCHHHHHHHHHHHHHHHHHh
Confidence 36999999999888876 4689999999999999988876
No 48
>d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]}
Probab=35.24 E-value=37 Score=23.41 Aligned_cols=58 Identities=14% Similarity=0.202 Sum_probs=43.6
Q ss_pred EEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCCeEEEEEEEcCCCcEEEcCHHHHHHHHHHhh
Q 031203 83 ATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAIS 161 (164)
Q Consensus 83 ~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~~iei~ii~~~~~~~k~l~~~ei~~~l~~~~ 161 (164)
.-.+|.|..++-+++-... .+.++++++++|..+=..... ..| ..+.++|++++.++.
T Consensus 242 vDttGAGDaF~ag~l~~l~---~g~~~~~al~~a~a~aa~~~~--------------~~G----~~~~~~v~~~~~~~~ 299 (306)
T d2abqa1 242 RNSVGAGDSVVAGFLAALQ---EGKSLEDAVPFAVAAGSATAF--------------SDG----FCTREEVERLQQQLQ 299 (306)
T ss_dssp CCCSSHHHHHHHHHHHHHH---TTCCHHHHHHHHHHHHHHHHH--------------SSS----CCCHHHHHHHHHHHT
T ss_pred CCCCcHHHHHHHHHHHHHH---cCCCHHHHHHHHHHHHHHHhc--------------CCC----CCCHHHHHHHHHHHH
Confidence 4578999999999998865 578999999999875433332 122 146889999999876
No 49
>d1r9pa_ d.224.1.2 (A:) NifU-like protein HI0377 {Haemophilus influenzae [TaxId: 727]}
Probab=34.52 E-value=48 Score=20.59 Aligned_cols=60 Identities=18% Similarity=0.232 Sum_probs=42.1
Q ss_pred cCCCC--CeE-EEeCCCcceeeeeEEeecCC-hHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhh
Q 031203 62 DEECG--PRL-FKCDPAGHFFGHKATSAGLK-EQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVL 124 (164)
Q Consensus 62 d~~~g--p~L-y~~dp~G~~~~~~~~aiG~~-s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~ 124 (164)
++.-| -.| ..++.+|.+...++.+.|.+ +....++|-... .+.|++||..+.-..+...+
T Consensus 34 np~CGD~v~i~l~i~~~~~I~di~f~~~GCais~Asas~~~e~i---~Gkt~~ea~~i~~~~i~e~l 97 (134)
T d1r9pa_ 34 APACGDVMQLQIKVDDNGIIEDAKFKTYGCGSAIASSSLITEWV---KGKSLEEAGAIKNSQIAEEL 97 (134)
T ss_dssp ETTTTEEEEEEEEECSSSBEEEEEEEEESSSSHHHHHHHHHHHS---SSSBHHHHTTSHHHHHHHHH
T ss_pred CCCcccEEEEEEEEcCCceEEEEEEEeccCcccHhHHHHHHHHH---HhCCHHHHHHhcchHHHHhh
Confidence 44344 344 44777888888899999976 666667777765 67899999888666555544
No 50
>d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]}
Probab=29.83 E-value=25 Score=24.19 Aligned_cols=60 Identities=10% Similarity=0.037 Sum_probs=42.1
Q ss_pred EeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCCeEEEEEEEcCCCcEEEcCHHHHHHHHHHh
Q 031203 84 TSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 160 (164)
Q Consensus 84 ~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~~iei~ii~~~~~~~k~l~~~ei~~~l~~~ 160 (164)
-.+|.|..++-+++-... .+.++++|+++|..+=...... .|..--.-+.+||+++|..|
T Consensus 240 DttGAGDaf~Ag~i~~l~---~g~~~~~al~~a~~~aa~~~~~--------------~G~~~~~p~~~ei~~~lk~~ 299 (299)
T d1vm7a_ 240 DTTAAGDVFNGAFAVALS---EGKNPEEAVIFGTAAAAISVTR--------------LGAQSSIPAREEVEAFLKNL 299 (299)
T ss_dssp CCTTHHHHHHHHHHHHHH---TTCCHHHHHHHHHHHHHHHTTS--------------SSSGGGCCCHHHHHHHHHTC
T ss_pred CCCCccHHHHHHHHHHHH---cCCCHHHHHHHHHHHHHHHhCc--------------CCCCCCCCCHHHHHHHHhcC
Confidence 477999999999998875 5689999999998875544432 11101124677888887654
No 51
>d2a2la1 d.110.9.1 (A:4-145) DhaI homolog {Klebsiella pneumoniae [TaxId: 573]}
Probab=29.69 E-value=33 Score=21.63 Aligned_cols=36 Identities=14% Similarity=0.177 Sum_probs=29.4
Q ss_pred CCCCHHHHHHHHHHHHHhhhhccCCCCeEEEEEEEcCCC
Q 031203 105 PAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENP 143 (164)
Q Consensus 105 ~~ls~eea~~l~~~al~~~~~~d~~~~~iei~ii~~~~~ 143 (164)
+.+|++.|.+++..|+..+.++.. .+.|.|++..|.
T Consensus 8 ~~ltl~~A~~i~~~a~~~a~~~g~---~v~iaVvD~~G~ 43 (142)
T d2a2la1 8 QTITLAAAQQMAAAVEKKATEINV---AVVFSVVDRGGN 43 (142)
T ss_dssp EEECHHHHHHHHHHHHHHHHHTTC---CCEEEEEETTSC
T ss_pred ccCCHHHHHHHHHHHHHHHHHcCC---ceEEEEEcCCCC
Confidence 458999999999999998875422 688999998764
No 52
>d1u94a2 d.48.1.1 (A:269-328) RecA protein, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=29.24 E-value=41 Score=18.14 Aligned_cols=29 Identities=21% Similarity=0.420 Sum_probs=26.1
Q ss_pred eCCCcceeeeeEEeecCChHHHHHHHHHh
Q 031203 72 CDPAGHFFGHKATSAGLKEQEAINFLEKK 100 (164)
Q Consensus 72 ~dp~G~~~~~~~~aiG~~s~~~~~~Le~~ 100 (164)
++-+|+...+..--+|-|...+..+|..+
T Consensus 16 i~KsGsWysy~~eklGQGre~~~~~L~en 44 (60)
T d1u94a2 16 IEKAGAWYSYKGEKIGQGKANATAWLKDN 44 (60)
T ss_dssp EECCTTCEEETTEEEESSHHHHHHHHHHC
T ss_pred cccccceEEeCCccccchHHHHHHHHHHC
Confidence 45689999999999999999999999885
No 53
>d1gg2g_ a.137.3.1 (G:) Transducin (heterotrimeric G protein), gamma chain {Cow (Bos taurus) [TaxId: 9913]}
Probab=29.21 E-value=39 Score=17.83 Aligned_cols=43 Identities=30% Similarity=0.200 Sum_probs=27.1
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhhccCccccce
Q 031203 3 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGV 54 (164)
Q Consensus 3 ~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~~~q~yt~~~~~rP~gv 54 (164)
++.+..++.||.++ .-..+.++..+.-|-+++..| ....||-.
T Consensus 3 ~q~rk~VeqLr~e~------~~~RikvS~aa~~l~~y~e~~---~~~Dpll~ 45 (54)
T d1gg2g_ 3 AQARKLVEQLKMEA------NIDRIKVSKAAADLMAYCEAH---AKEDPLLT 45 (54)
T ss_dssp HHHHHHHHHHHHHH------SSCCCCHHHHHHHHHHHHHHH---GGGCTTTS
T ss_pred HHHHHHHHHHHHHh------CCchhhHHHHHHHHHHHHHhc---CcCCCCcC
Confidence 35556666666555 346788888777777776554 44557744
No 54
>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}
Probab=27.97 E-value=15 Score=21.39 Aligned_cols=18 Identities=28% Similarity=0.355 Sum_probs=14.4
Q ss_pred CCCeEEEeCCCcceeeee
Q 031203 65 CGPRLFKCDPAGHFFGHK 82 (164)
Q Consensus 65 ~gp~Ly~~dp~G~~~~~~ 82 (164)
.|.++|-.||+|+..+..
T Consensus 101 ~g~~~~~~DPdGn~ief~ 118 (120)
T d1xrka_ 101 WGREFALRDPAGNCVHFV 118 (120)
T ss_dssp TEEEEEEECTTCCEEEEE
T ss_pred CEEEEEEECCCCCEEEEE
Confidence 356899999999987753
No 55
>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}
Probab=27.74 E-value=22 Score=20.80 Aligned_cols=18 Identities=28% Similarity=0.423 Sum_probs=14.6
Q ss_pred CCCeEEEeCCCcceeeee
Q 031203 65 CGPRLFKCDPAGHFFGHK 82 (164)
Q Consensus 65 ~gp~Ly~~dp~G~~~~~~ 82 (164)
++-++|..||+|+..+..
T Consensus 102 g~~~~~~~DPdGn~ief~ 119 (122)
T d1jifa_ 102 AGREFAVRDPAGNCVHFT 119 (122)
T ss_dssp TEEEEEEECTTCCEEEEE
T ss_pred CeEEEEEECCCCCEEEEE
Confidence 456899999999988753
No 56
>d1mo6a2 d.48.1.1 (A:270-329) RecA protein, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=27.64 E-value=9.7 Score=20.91 Aligned_cols=29 Identities=24% Similarity=0.408 Sum_probs=25.9
Q ss_pred eCCCcceeeeeEEeecCChHHHHHHHHHh
Q 031203 72 CDPAGHFFGHKATSAGLKEQEAINFLEKK 100 (164)
Q Consensus 72 ~dp~G~~~~~~~~aiG~~s~~~~~~Le~~ 100 (164)
++-+|+...+..--+|-|...+..+|..+
T Consensus 16 i~KsGaWysy~~ekiGQGre~a~~~L~en 44 (60)
T d1mo6a2 16 IRKSGAWFTYEGEQLGQGKENARNFLVEN 44 (60)
T ss_dssp SEESSSEEECSSSEEEESHHHHHHHHHHC
T ss_pred hhccCceeEECCchHHhHHHHHHHHHHHC
Confidence 45689999999999999999999999985
No 57
>d2fyma1 c.1.11.1 (A:140-431) Enolase {Escherichia coli [TaxId: 562]}
Probab=27.64 E-value=71 Score=22.82 Aligned_cols=91 Identities=16% Similarity=0.247 Sum_probs=52.6
Q ss_pred CeEEEeCCCcceeeeeEEeecCC-hHHHHHHHHHhhcC---------CCCC-CHHHHHHHHHHHHHhhhhccCCCC-eEE
Q 031203 67 PRLFKCDPAGHFFGHKATSAGLK-EQEAINFLEKKMKN---------DPAF-TFQETVQTAISTLQSVLQEDFKAS-EIE 134 (164)
Q Consensus 67 p~Ly~~dp~G~~~~~~~~aiG~~-s~~~~~~Le~~~~~---------~~~l-s~eea~~l~~~al~~~~~~d~~~~-~ie 134 (164)
.|=|.+=|.|..+-..+.-.|.- -..+...|.+.... -|++ +.+||++++..|+..+-. ..+ .|.
T Consensus 26 ~QEfmIiP~ga~sf~eal~~~~evy~~lk~iL~~k~~~t~vgDEGGfap~~~~~eeaL~ll~eAi~~aGy---~~G~di~ 102 (292)
T d2fyma1 26 IQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGY---ELGKDIT 102 (292)
T ss_dssp SSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTSCBCCCCSSHHHHHHHHHHHHHHTTC---CBTTTBE
T ss_pred CeEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCcccCccceecccCccHHHHHHHHHHHHHcCC---CCCceEE
Confidence 34577778776654444334332 33344455543211 2444 889999999999986642 222 455
Q ss_pred EEE--------------EEcCCCcEEEcCHHHHHHHHHHhhc
Q 031203 135 VGV--------------VSKENPEFRVLSIEEIDEHLTAISE 162 (164)
Q Consensus 135 i~i--------------i~~~~~~~k~l~~~ei~~~l~~~~~ 162 (164)
|++ ...+++ +.++++|+-+++..+-+
T Consensus 103 ialD~AAsefy~~~~y~~~~~~~--~~~t~~eli~~y~~l~~ 142 (292)
T d2fyma1 103 LAMDCAASEFYKDGKYVLAGEGN--KAFTSEEFTHFLEELTK 142 (292)
T ss_dssp EEEECCGGGGEETTEEEEGGGTT--EEECHHHHHHHHHHHHH
T ss_pred EeeeechhhhhccccceeccCCC--ccccHHHHHHHHHHHHh
Confidence 543 111221 56899999888877654
No 58
>d1puee_ a.4.5.21 (E:) Transcription factor PU.1, residues 171-259 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.09 E-value=46 Score=19.46 Aligned_cols=27 Identities=19% Similarity=0.228 Sum_probs=21.6
Q ss_pred CeEEEEEEEcCCCcEEEcC--HHHHHHHHH
Q 031203 131 SEIEVGVVSKENPEFRVLS--IEEIDEHLT 158 (164)
Q Consensus 131 ~~iei~ii~~~~~~~k~l~--~~ei~~~l~ 158 (164)
..+ |.+.+++++.|+++. +++|.++..
T Consensus 18 ~~~-I~Wt~~~~g~F~fv~~~~e~VA~lWG 46 (88)
T d1puee_ 18 KDS-IWWVDKDKGTFQFSSKHKEALAHRWG 46 (88)
T ss_dssp TTT-EEEEETTTTEEEECTTTHHHHHHHHH
T ss_pred CCc-eEeeCCCCceEEEEeCCHHHHHHHHH
Confidence 455 999999887899876 788988865
No 59
>d1vh4a_ b.80.6.1 (A:) Stabilizer of iron transporter SufD {Escherichia coli [TaxId: 562]}
Probab=26.56 E-value=43 Score=24.72 Aligned_cols=51 Identities=18% Similarity=0.199 Sum_probs=38.5
Q ss_pred CCeEEEeCCCcceeeeeEEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhh
Q 031203 66 GPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSV 123 (164)
Q Consensus 66 gp~Ly~~dp~G~~~~~~~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~ 123 (164)
.|.|--..++= ...-++++|.=.....-||..+ +++.+||.++.++++..-
T Consensus 338 ~P~Lei~~ddv--~~~Hgatvg~id~~~lfYL~sR-----Gi~~~eA~~ll~~gF~~~ 388 (413)
T d1vh4a_ 338 KPQLEIYADDV--KCSHGATVGRIDDEQIFYLRSR-----GINQQDAQQMIIYAFAAE 388 (413)
T ss_dssp EEEEEECCSSE--EEEEEEEEECCCHHHHHHHHHT-----TCCHHHHHHHHHHHHHHH
T ss_pred cceEEEecCCe--eEEeeeeccCCCHHHHHHHHHc-----CCCHHHHHHHHHHHHHHH
Confidence 36554433332 2336899999999999999984 699999999999998643
No 60
>d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]}
Probab=26.21 E-value=33 Score=23.40 Aligned_cols=61 Identities=15% Similarity=0.192 Sum_probs=44.0
Q ss_pred EEeecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhhhhccCCCCeEEEEEEEcCCCcEEEcCHHHHHHHHHHh
Q 031203 83 ATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 160 (164)
Q Consensus 83 ~~aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al~~~~~~d~~~~~iei~ii~~~~~~~k~l~~~ei~~~l~~~ 160 (164)
.-++|.|..+.-+++-... .+.+.++++.+|..+=.......-. .. ..-+.+|++++|.++
T Consensus 248 vDt~GAGDaf~ag~i~~l~---~g~~~~~a~~~a~~~aa~~~~~~G~----------~~----~~p~~~~~~~~l~~~ 308 (308)
T d2dcna1 248 EDVTGAGDALGGTFLSLYY---KGFEMEKALDYAIVASTLNVMIRGD----------QE----NLPTTKDIETFLREM 308 (308)
T ss_dssp SCCTTHHHHHHHHHHHHHT---TTCCHHHHHHHHHHHHHHHTTSSSS----------ST----TCCCHHHHHHHHHHC
T ss_pred cCCCChHHHHHHHHHHHHH---cCCCHHHHHHHHHHHHHHHhCcCCC----------Cc----CCCCHHHHHHHHhhC
Confidence 3678999999999999885 5689999999998865555433111 01 134778888888764
No 61
>d1w2fa_ d.143.1.3 (A:) Inositol 1,4,5-trisphosphate 3-kinase A, IP3K A {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.18 E-value=27 Score=24.58 Aligned_cols=29 Identities=10% Similarity=0.062 Sum_probs=21.7
Q ss_pred cCccccceeeEEEEEcCCCCCeEEEeCCCc
Q 031203 47 AYMRPLGVVAMVLSIDEECGPRLFKCDPAG 76 (164)
Q Consensus 47 ~~~rP~gv~~iiaG~d~~~gp~Ly~~dp~G 76 (164)
.+.|.|+.|+|++ +|.+....+..+|-.=
T Consensus 206 ~~~rf~sSSLLiv-YDg~~~~~v~lIDFAh 234 (276)
T d1w2fa_ 206 RRHEVIGSSLLFV-HDHCHRAGVWLIDFGK 234 (276)
T ss_dssp HTEEEESCEEEEE-ECTTCCEEEEEECCTE
T ss_pred ccceeccceEEEE-EcCCCcCcEEEEeccc
Confidence 4568899888886 8876667888888543
No 62
>d2d30a1 c.97.1.1 (A:1-124) mono-domain cytidine deaminase {Bacillus anthracis [TaxId: 1392]}
Probab=25.96 E-value=66 Score=19.68 Aligned_cols=35 Identities=9% Similarity=0.190 Sum_probs=26.2
Q ss_pred CCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEEEcCCC
Q 031203 107 FTFQETVQTAISTLQSVLQEDFKAS-EIEVGVVSKENP 143 (164)
Q Consensus 107 ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii~~~~~ 143 (164)
|+.+|.++.|+++...+. -..|+ .+=-++.+++|.
T Consensus 1 m~~~~L~~~A~~a~~~ay--aPyS~f~VGAal~~~~G~ 36 (124)
T d2d30a1 1 MNSKQLIQEAIEARKQAY--VPYSKFQVGAALLTQDGK 36 (124)
T ss_dssp CCHHHHHHHHHHHHTTCB--CTTTCCCEEEEEEETTCC
T ss_pred CCHHHHHHHHHHHHHcCc--CCccCCcEEEEEEeCCCC
Confidence 678899999999887765 23455 676777888874
No 63
>d2v4jc1 d.203.1.1 (C:3-105) DsrC, the gamma subunit of dissimilatory sulfite reductase {Desulfovibrio vulgaris [TaxId: 881]}
Probab=25.62 E-value=62 Score=19.36 Aligned_cols=34 Identities=18% Similarity=0.205 Sum_probs=25.2
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 031203 1 MTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 38 (164)
Q Consensus 1 l~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~ls~ 38 (164)
|+.+--.+++.+|. |..+++..++++.+++.+..
T Consensus 40 Lt~~HW~vI~~lR~----~y~~~~~~P~~R~l~K~~~~ 73 (103)
T d2v4jc1 40 ISPDHQKIIDFLQD----YYKKNGIAPMVRILSKNTGF 73 (103)
T ss_dssp CCHHHHHHHHHHHH----HHHHHSSCCCHHHHHHHHCC
T ss_pred cCHHHHHHHHHHHH----HHHHhCCCCcHHHHHHHhch
Confidence 34566677787775 55668999999999988754
No 64
>d1flia_ a.4.5.21 (A:) Fli-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.73 E-value=24 Score=21.27 Aligned_cols=24 Identities=17% Similarity=0.285 Sum_probs=19.0
Q ss_pred EEEEEcCCCcEEEcCHHHHHHHHHH
Q 031203 135 VGVVSKENPEFRVLSIEEIDEHLTA 159 (164)
Q Consensus 135 i~ii~~~~~~~k~l~~~ei~~~l~~ 159 (164)
|.+ +.+++.|+++++++|.+...+
T Consensus 25 I~W-~~~~geFkl~~~~~VA~lWG~ 48 (98)
T d1flia_ 25 ITW-EGTNGEFKMTDPDEVARRWGE 48 (98)
T ss_dssp EEC-TTSSSSCEECCHHHHHHHHHH
T ss_pred eEE-ECCCCEEEeCCHHHHHHHHHH
Confidence 777 445567999999999988764
No 65
>d1hh2p4 d.202.1.1 (P:1-126) Transcription factor NusA, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=24.02 E-value=54 Score=20.22 Aligned_cols=34 Identities=21% Similarity=0.340 Sum_probs=27.2
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhccCCCC-eEEEEE
Q 031203 104 DPAFTFQETVQTAISTLQSVLQEDFKAS-EIEVGV 137 (164)
Q Consensus 104 ~~~ls~eea~~l~~~al~~~~~~d~~~~-~iei~i 137 (164)
..+++.+..+..+..||..++.+..+.. ++++.+
T Consensus 15 EKgI~~e~v~~aie~al~~A~kk~~g~~~~~~v~i 49 (126)
T d1hh2p4 15 EKGISKEEVIPILEKALVSAYRKNFGNSKNVEVVI 49 (126)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHTTTCSSSCEEEEC
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHhcCCccceEEEE
Confidence 4689999999999999999998876654 566543
No 66
>d1jfua_ c.47.1.10 (A:) Membrane-anchored thioredoxin-like protein TlpA, soluble domain {Bradyrhizobium japonicum [TaxId: 375]}
Probab=23.80 E-value=48 Score=21.01 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=19.9
Q ss_pred CCeEEEeCCCcceeeeeEEeecCChHHHHHHHH
Q 031203 66 GPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 98 (164)
Q Consensus 66 gp~Ly~~dp~G~~~~~~~~aiG~~s~~~~~~Le 98 (164)
-|..|-+|..|.+.......+-..+..+...|+
T Consensus 140 ~P~~~lID~~G~I~~~~~G~~~~~~~e~~~~l~ 172 (176)
T d1jfua_ 140 MPTSVLVDPQGCEIATIAGPAEWASEDALKLIR 172 (176)
T ss_dssp SSEEEEECTTSBEEEEEESCCCTTSHHHHHHHH
T ss_pred CCeEEEEcCCCEEEEEEECCCCCChHHHHHHHH
Confidence 399999999999865432222233344444444
No 67
>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}
Probab=23.80 E-value=18 Score=20.88 Aligned_cols=18 Identities=11% Similarity=0.135 Sum_probs=14.0
Q ss_pred CCCeEEEeCCCcceeeee
Q 031203 65 CGPRLFKCDPAGHFFGHK 82 (164)
Q Consensus 65 ~gp~Ly~~dp~G~~~~~~ 82 (164)
.+-.+|..||+|...+..
T Consensus 95 ~~~~~~~~DPdG~~iEi~ 112 (113)
T d1xqaa_ 95 HAYTFYVEAPGGFTIEVM 112 (113)
T ss_dssp -CEEEEEEETTTEEEEEE
T ss_pred ceEEEEEECCCCCEEEEE
Confidence 356789999999988753
No 68
>d1uwza_ c.97.1.1 (A:) mono-domain cytidine deaminase {Bacillus subtilis [TaxId: 1423]}
Probab=23.68 E-value=74 Score=19.58 Aligned_cols=35 Identities=11% Similarity=0.198 Sum_probs=25.3
Q ss_pred CCHHHHHHHHHHHHHhhhhccCCCC-eEEEEEEEcCCC
Q 031203 107 FTFQETVQTAISTLQSVLQEDFKAS-EIEVGVVSKENP 143 (164)
Q Consensus 107 ls~eea~~l~~~al~~~~~~d~~~~-~iei~ii~~~~~ 143 (164)
|+.+++++.|+++...+. -..|+ .+=-++.+.+|.
T Consensus 1 m~~~~L~~~A~~a~~~ay--aPyS~f~VGAa~~~~~G~ 36 (130)
T d1uwza_ 1 MNRQELITEALKARDMAY--APYSKFQVGAALLTKDGK 36 (130)
T ss_dssp CCHHHHHHHHHHHHTTCB--CTTTCCCEEEEEEETTSC
T ss_pred CCHHHHHHHHHHHHHhCc--CCccCCcEEEEEEeCCCC
Confidence 678899999988877665 33455 666777787764
No 69
>d1ixsa_ a.5.1.1 (A:) DNA helicase RuvA subunit, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=22.32 E-value=23 Score=18.30 Aligned_cols=36 Identities=22% Similarity=0.366 Sum_probs=24.6
Q ss_pred eecCChHHHHHHHHHhhcCCCCCCHHHHHHHHHHHH
Q 031203 85 SAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 120 (164)
Q Consensus 85 aiG~~s~~~~~~Le~~~~~~~~ls~eea~~l~~~al 120 (164)
+.|-....+.+..-.....+|..+.++.++.+++.|
T Consensus 14 aLGFrE~QvRsvVaell~~nP~a~aq~lIr~aL~~L 49 (50)
T d1ixsa_ 14 ALGFKEAQARAVVLDLLAQNPKARAQDLIKEALKRL 49 (50)
T ss_dssp HTTCCHHHHHHHHHHHHHHCTTCCHHHHHHHHHTTC
T ss_pred HhcccHHHHHHHHHHHHHhCccccHHHHHHHHHhhc
Confidence 456666666666555444478999999988887654
No 70
>d3bzka5 c.55.3.13 (A:325-473) Transcriptional accessory factor Tex {Pseudomonas aeruginosa [TaxId: 287]}
Probab=22.21 E-value=41 Score=21.52 Aligned_cols=25 Identities=20% Similarity=0.422 Sum_probs=20.3
Q ss_pred EEEEcCC--CCCeEEEeCCCcceeeee
Q 031203 58 VLSIDEE--CGPRLFKCDPAGHFFGHK 82 (164)
Q Consensus 58 iaG~d~~--~gp~Ly~~dp~G~~~~~~ 82 (164)
|.|+|+. +|-.+-.+|+.|.+....
T Consensus 7 vlg~DPg~r~gck~AvlD~~G~vld~~ 33 (149)
T d3bzka5 7 TLGLDPGLRTGVKVAVVDATGKLLDTA 33 (149)
T ss_dssp EEEEECCSTTCEEEEEECTTSCEEEEE
T ss_pred EEEECCCcccccEEEEECCCCCEEEEE
Confidence 5679993 567899999999998853
No 71
>d1b0nb_ a.34.1.1 (B:) SinI anti-repressor {Bacillus subtilis [TaxId: 1423]}
Probab=21.45 E-value=25 Score=15.88 Aligned_cols=11 Identities=45% Similarity=0.456 Sum_probs=7.6
Q ss_pred cCHHHHHHHHH
Q 031203 148 LSIEEIDEHLT 158 (164)
Q Consensus 148 l~~~ei~~~l~ 158 (164)
++|+||.+++.
T Consensus 19 ispeeirkyll 29 (31)
T d1b0nb_ 19 ISPEEIRKYLL 29 (31)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHh
Confidence 57777777753
No 72
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=20.48 E-value=66 Score=17.51 Aligned_cols=23 Identities=9% Similarity=0.011 Sum_probs=17.3
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHH
Q 031203 15 EAAEFRFKYGYEMPVDVLAKWIA 37 (164)
Q Consensus 15 ~~~~~~~~~~~~i~~~~l~~~ls 37 (164)
....|...+|.+++.+.++..+.
T Consensus 13 ~I~~~~~~~G~~Ps~rei~~~~g 35 (71)
T d1jhfa1 13 LIRDHISQTGMPPTRAEIAQRLG 35 (71)
T ss_dssp HHHHHHHHHSSCCCHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCHHHHHHHcC
Confidence 34456677899999999887653
Done!