Query 031204
Match_columns 164
No_of_seqs 218 out of 1696
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 17:05:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031204.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031204hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wfj_A Putative elicitor-respo 99.9 1.4E-26 4.7E-31 157.0 15.5 126 2-163 6-136 (136)
2 2fk9_A Protein kinase C, ETA t 99.9 2.2E-26 7.4E-31 159.6 14.3 117 1-155 24-155 (157)
3 1gmi_A Protein kinase C, epsil 99.9 3E-26 1E-30 155.5 14.2 120 1-158 1-134 (136)
4 2ep6_A MCTP2 protein; beta san 99.9 4.1E-26 1.4E-30 154.2 11.3 93 2-94 9-103 (133)
5 2dmh_A Myoferlin; beta-sandwic 99.9 2.5E-25 8.6E-30 151.4 15.2 122 3-161 4-137 (140)
6 3kwu_A MUNC13-1; calcium bindi 99.9 4.8E-25 1.6E-29 151.5 16.2 91 2-92 13-116 (148)
7 1rlw_A Phospholipase A2, CALB 99.9 5.6E-25 1.9E-29 147.1 12.9 115 5-157 2-125 (126)
8 2nq3_A Itchy homolog E3 ubiqui 99.9 3.7E-24 1.3E-28 150.8 17.0 125 4-161 34-165 (173)
9 3b7y_A E3 ubiquitin-protein li 99.9 8.6E-25 3E-29 150.9 13.1 94 3-96 17-118 (153)
10 3m7f_B E3 ubiquitin-protein li 99.9 2.6E-24 8.8E-29 151.9 14.0 126 2-158 4-142 (176)
11 3pyc_A E3 ubiquitin-protein li 99.9 1.1E-22 3.8E-27 137.1 15.1 91 4-95 3-100 (132)
12 2b3r_A Phosphatidylinositol-4- 99.9 2.5E-22 8.5E-27 135.9 12.6 92 4-95 18-119 (134)
13 1a25_A CALB, protein kinase C 99.9 9.3E-23 3.2E-27 140.2 9.6 91 5-95 30-129 (149)
14 3rdl_A Protein kinase C alpha 99.9 2.5E-22 8.6E-27 135.9 11.0 91 5-95 15-114 (137)
15 1rsy_A Synaptotagmin I; calciu 99.9 7.6E-22 2.6E-26 136.1 10.9 92 4-95 40-139 (152)
16 3jzy_A Intersectin 2; C2 domai 99.9 6E-21 2.1E-25 154.2 17.0 122 3-157 384-508 (510)
17 3fbk_A RGS3, RGP3, regulator o 99.9 1.8E-21 6.1E-26 134.4 11.6 91 4-94 25-124 (153)
18 3f04_A Synaptotagmin-1; C2A, c 99.9 7.9E-22 2.7E-26 134.6 9.4 93 4-96 32-132 (143)
19 2d8k_A Synaptotagmin VII; exoc 99.9 1.4E-21 4.8E-26 133.1 10.6 93 4-96 24-125 (141)
20 3fdw_A Synaptotagmin-like prot 99.9 1.1E-21 3.7E-26 134.7 9.6 95 4-98 21-126 (148)
21 2r83_A Synaptotagmin-1; C2A-C2 99.9 6.7E-21 2.3E-25 143.5 14.1 92 4-95 17-116 (284)
22 2z0u_A WW domain-containing pr 99.9 7.5E-22 2.6E-26 136.7 8.1 90 4-93 41-141 (155)
23 2bwq_A Regulating synaptic mem 99.9 1.9E-21 6.5E-26 130.4 9.8 91 4-94 16-119 (129)
24 1rh8_A Piccolo protein; beta-s 99.9 4.4E-22 1.5E-26 135.6 6.5 92 5-96 17-128 (142)
25 2chd_A Rabphilin-3A, exophilin 99.9 2.4E-21 8.1E-26 132.0 9.6 93 4-96 27-130 (142)
26 2q3x_A Regulating synaptic mem 99.9 3.4E-21 1.2E-25 135.4 10.1 92 4-95 28-128 (171)
27 1v27_A Regulating synaptic mem 99.9 1.5E-21 5.1E-26 132.7 7.7 91 4-94 19-122 (141)
28 1wfm_A Synaptotagmin XIII; C2 99.8 9.5E-21 3.2E-25 128.7 10.8 88 4-94 24-120 (138)
29 1ugk_A Synaptotagmin IV, KIAA1 99.8 1.2E-20 4.2E-25 127.9 10.7 92 4-95 20-121 (138)
30 1tjx_A Similar to synaptotagmi 99.8 1.4E-20 4.9E-25 130.5 11.2 91 4-94 23-123 (159)
31 2cm5_A Rabphilin-3A; protein t 99.8 1.9E-20 6.6E-25 130.8 11.7 91 4-94 35-135 (166)
32 3n5a_A Synaptotagmin-7; calciu 99.8 8.6E-21 2.9E-25 128.4 8.7 92 4-95 14-115 (138)
33 2dmg_A KIAA1228 protein; beta- 99.8 1.2E-20 4.1E-25 128.5 8.3 91 4-95 22-124 (142)
34 3nsj_A Perforin-1; pore formin 99.8 1.1E-19 3.7E-24 147.4 15.2 86 4-90 392-481 (540)
35 2enp_A B/K protein; C2 type 1, 99.8 1.1E-20 3.7E-25 129.5 8.0 92 4-95 24-130 (147)
36 1w15_A Synaptotagmin IV; metal 99.8 9.3E-20 3.2E-24 125.6 12.5 88 4-91 28-125 (153)
37 2cjt_A UNC-13 homolog A, MUNC1 99.8 2.3E-20 7.8E-25 125.8 8.9 87 4-95 3-91 (131)
38 1dqv_A Synaptotagmin III; beta 99.8 2.1E-19 7.1E-24 136.3 13.0 90 3-92 17-115 (296)
39 2cjs_A UNC-13 homolog A, MUNC1 99.8 7.1E-19 2.4E-23 123.0 12.5 88 3-95 11-100 (167)
40 3l9b_A Otoferlin; C2-domain, b 99.8 4E-18 1.4E-22 114.7 15.2 89 6-98 21-114 (144)
41 1djx_A PLC-D1, phosphoinositid 99.8 2.8E-17 9.4E-22 135.6 15.7 92 4-95 495-597 (624)
42 2r83_A Synaptotagmin-1; C2A-C2 99.7 1E-17 3.6E-22 126.0 11.0 91 4-94 148-248 (284)
43 1cjy_A CPLA2, protein (cytosol 99.7 8.1E-18 2.8E-22 140.5 11.2 93 3-96 15-116 (749)
44 3bxj_A RAS GTPase-activating p 99.7 1.2E-18 4.1E-23 140.1 0.7 89 4-96 9-106 (483)
45 1dqv_A Synaptotagmin III; beta 99.7 4.6E-17 1.6E-21 123.4 4.7 91 4-94 150-250 (296)
46 3pfq_A PKC-B, PKC-beta, protei 99.6 4.7E-15 1.6E-19 123.6 10.5 91 5-95 171-270 (674)
47 1yrk_A NPKC-delta, protein kin 99.5 9.9E-13 3.4E-17 86.0 14.0 113 4-156 4-124 (126)
48 2enj_A NPKC-theta, protein kin 99.5 1.3E-12 4.5E-17 86.5 12.4 116 3-157 7-130 (138)
49 3ohm_B 1-phosphatidylinositol- 99.5 5.2E-13 1.8E-17 113.3 11.9 83 6-95 725-818 (885)
50 2zkm_X 1-phosphatidylinositol- 99.4 1.5E-12 5.1E-17 110.0 13.3 85 4-95 676-772 (799)
51 3qr0_A Phospholipase C-beta (P 99.4 2E-12 6.7E-17 109.2 13.8 84 5-95 649-744 (816)
52 2wxf_A Phosphatidylinositol-4, 95.6 0.12 4E-06 44.8 10.9 87 5-93 216-325 (940)
53 3hhm_A Phosphatidylinositol-4, 95.4 0.18 6E-06 44.2 11.2 88 5-93 354-456 (1091)
54 1e7u_A Phosphatidylinositol 3- 94.9 0.3 1E-05 42.4 11.2 88 6-93 218-331 (961)
55 2yrb_A Protein fantom; beta sa 94.6 0.65 2.2E-05 31.4 12.6 91 2-95 14-119 (156)
56 3l4c_A Dedicator of cytokinesi 93.3 1.6 5.3E-05 31.2 12.1 53 38-90 79-138 (220)
57 2y3a_A Phosphatidylinositol-4, 92.4 0.21 7.2E-06 43.9 5.8 86 5-92 352-470 (1092)
No 1
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.95 E-value=1.4e-26 Score=157.01 Aligned_cols=126 Identities=25% Similarity=0.404 Sum_probs=110.6
Q ss_pred CcccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEECCE-Eeeeeee-CCCCCeEecEEEEEEeCCCCcEEEEEEeCCCCCC
Q 031204 2 ENLMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGKQ-LKTRVVK-NNVNPEWNEDLTLSISDSNLPIKLTVYDKDTFSL 78 (164)
Q Consensus 2 ~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~~-~~T~~~~-~t~~P~w~e~~~f~~~~~~~~l~i~v~d~~~~~~ 78 (164)
..+.|.|.|+|++|++|+..+ .+.+||||++.+.++ ++|++++ ++.||.|||+|.|.+......|.|+|||++.+++
T Consensus 6 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~~~ 85 (136)
T 1wfj_A 6 SGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGTE 85 (136)
T ss_dssp CCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSCTT
T ss_pred CCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCCCC
Confidence 457899999999999999998 889999999999998 9999998 8999999999999998766789999999999989
Q ss_pred CceeEEEEEechhhhhhhcccccCCCCceEEEEeccCCCccccccceeEeeCCeEEEEEeEEec--ccceeeEEEEEEEE
Q 031204 79 DDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLR--NVEVGEVKIQLEWI 156 (164)
Q Consensus 79 ~~~lG~~~v~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~--~~~~G~l~l~l~~~ 156 (164)
|++||++.+++.++..... ..+.|++|. +...|+|+|+++|.
T Consensus 86 d~~lG~~~i~l~~l~~~~~------------------------------------~~~~w~~L~~~~~~~G~i~l~l~~~ 129 (136)
T 1wfj_A 86 DDAVGEATIPLEPVFVEGS------------------------------------IPPTAYNVVKDEEYKGEIWVALSFK 129 (136)
T ss_dssp TCCSEEEEEESHHHHHHSE------------------------------------EEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred CceEEEEEEEHHHhccCCC------------------------------------CCcEEEEeecCCccCEEEEEEEEEE
Confidence 9999999999999855321 236777764 45689999999999
Q ss_pred ecCCCCC
Q 031204 157 DIPGSRG 163 (164)
Q Consensus 157 ~~~~~~~ 163 (164)
|...+-|
T Consensus 130 p~~~~~g 136 (136)
T 1wfj_A 130 PSGPSSG 136 (136)
T ss_dssp ECCSCCC
T ss_pred eCCCCCC
Confidence 9988765
No 2
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.94 E-value=2.2e-26 Score=159.57 Aligned_cols=117 Identities=18% Similarity=0.322 Sum_probs=102.1
Q ss_pred CCcccEEEEEEEEEeEcCCCCC-C----------CCCCcEEEEEECCE--EeeeeeeCCCCCeEecEEEEEEeCCCCcEE
Q 031204 1 MENLMGLLRVHVLRGVNLAVRD-V----------VSSDPYVVIKMGKQ--LKTRVVKNNVNPEWNEDLTLSISDSNLPIK 67 (164)
Q Consensus 1 ~~~~~g~L~v~v~~a~~L~~~~-~----------~~~dpyv~v~~~~~--~~T~~~~~t~~P~w~e~~~f~~~~~~~~l~ 67 (164)
|....|.|+|+|++|++|++++ . +.+||||++.++++ .+|+++.++.||.|||+|.|.+.. ...|.
T Consensus 24 ~~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~L~ 102 (157)
T 2fk9_A 24 TMKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGHLE 102 (157)
T ss_dssp CCCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEEE
T ss_pred hccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-CCEEE
Confidence 4457899999999999999887 2 56899999999987 799999999999999999999864 45799
Q ss_pred EEEEeCCCCCCCceeEEEEEechhhhhh--hcccccCCCCceEEEEeccCCCccccccceeEeeCCeEEEEEeEEecccc
Q 031204 68 LTVYDKDTFSLDDKMGDAEFYITPFLEA--LKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLRNVE 145 (164)
Q Consensus 68 i~v~d~~~~~~~~~lG~~~v~l~~l~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~ 145 (164)
|+|||++.+++|++||++.|++.++..+ ... ..+.|++|. +
T Consensus 103 ~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~-----------------------------------~~~~W~~L~--~ 145 (157)
T 2fk9_A 103 LAVFHETPLGYDHFVANCTLQFQELLRTTGASD-----------------------------------TFEGWVDLE--P 145 (157)
T ss_dssp EEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCS-----------------------------------EEEEEEECB--S
T ss_pred EEEEECCCCCCCCEEEEEEEEHHHhhcccCCCC-----------------------------------cccEEEECC--C
Confidence 9999999999999999999999998875 111 238999997 5
Q ss_pred eeeEEEEEEE
Q 031204 146 VGEVKIQLEW 155 (164)
Q Consensus 146 ~G~l~l~l~~ 155 (164)
.|+|+|+++|
T Consensus 146 ~G~i~l~l~~ 155 (157)
T 2fk9_A 146 EGKVFVVITL 155 (157)
T ss_dssp SCEEEEEEEE
T ss_pred CcEEEEEEEE
Confidence 9999999998
No 3
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.94 E-value=3e-26 Score=155.52 Aligned_cols=120 Identities=18% Similarity=0.370 Sum_probs=104.2
Q ss_pred CCcccEEEEEEEEEeEcCCCCC-CCC-----------CCcEEEEEECCE--EeeeeeeCCCCCeEecEEEEEEeCCCCcE
Q 031204 1 MENLMGLLRVHVLRGVNLAVRD-VVS-----------SDPYVVIKMGKQ--LKTRVVKNNVNPEWNEDLTLSISDSNLPI 66 (164)
Q Consensus 1 ~~~~~g~L~v~v~~a~~L~~~~-~~~-----------~dpyv~v~~~~~--~~T~~~~~t~~P~w~e~~~f~~~~~~~~l 66 (164)
|.-..|.|.|+|++|++|++.+ ++. +||||++.+++. .+|+++.++.||.|||+|.|.+... ..|
T Consensus 1 m~~~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L 79 (136)
T 1gmi_A 1 MVVFNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKI 79 (136)
T ss_dssp CCCEEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEE
T ss_pred CcccceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEE
Confidence 6677899999999999999887 433 999999999887 8999999999999999999999755 679
Q ss_pred EEEEEeCCCCCCCceeEEEEEechhhhhhhcccccCCCCceEEEEeccCCCccccccceeEeeCCeEEEEEeEEecccce
Q 031204 67 KLTVYDKDTFSLDDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLRNVEV 146 (164)
Q Consensus 67 ~i~v~d~~~~~~~~~lG~~~v~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~ 146 (164)
.|+|||++.+++|++||++.+++.++...... ..+.|+.|. ++
T Consensus 80 ~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~-----------------------------------~~~~w~~L~--~~ 122 (136)
T 1gmi_A 80 ELAVFHDAPIGYDDFVANCTIQFEELLQNGSR-----------------------------------HFEDWIDLE--PE 122 (136)
T ss_dssp EEEEEECCSSSSCEEEEEEEEEHHHHTSTTCS-----------------------------------EEEEEEECB--SS
T ss_pred EEEEEeCCCCCCCCEEEEEEEEHHHhcccCCC-----------------------------------CccEEEEcC--CC
Confidence 99999999998999999999999998764321 237899887 58
Q ss_pred eeEEEEEEEEec
Q 031204 147 GEVKIQLEWIDI 158 (164)
Q Consensus 147 G~l~l~l~~~~~ 158 (164)
|+|+|+++|...
T Consensus 123 G~i~l~l~~~~~ 134 (136)
T 1gmi_A 123 GKVYVIIDLSGS 134 (136)
T ss_dssp CEEEEEEEEEEE
T ss_pred eEEEEEEEEEec
Confidence 999999999764
No 4
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.94 E-value=4.1e-26 Score=154.20 Aligned_cols=93 Identities=31% Similarity=0.560 Sum_probs=86.5
Q ss_pred CcccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEECCE-EeeeeeeCCCCCeEecEEEEEEeCCCCcEEEEEEeCCCCCCC
Q 031204 2 ENLMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGKQ-LKTRVVKNNVNPEWNEDLTLSISDSNLPIKLTVYDKDTFSLD 79 (164)
Q Consensus 2 ~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~~-~~T~~~~~t~~P~w~e~~~f~~~~~~~~l~i~v~d~~~~~~~ 79 (164)
..+.|.|.|+|++|++|++.+ .+.+||||++.++++ ++|++++++.||.|||+|.|.+.++...|.|+|||++.++++
T Consensus 9 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~~~~ 88 (133)
T 2ep6_A 9 VKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGDKPP 88 (133)
T ss_dssp CCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETTEEE
T ss_pred cCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCCCCC
Confidence 357899999999999999988 789999999999999 999999999999999999999987777899999999999889
Q ss_pred ceeEEEEEechhhhh
Q 031204 80 DKMGDAEFYITPFLE 94 (164)
Q Consensus 80 ~~lG~~~v~l~~l~~ 94 (164)
++||++.+++.++..
T Consensus 89 ~~lG~~~i~l~~l~~ 103 (133)
T 2ep6_A 89 DFLGKVAIPLLSIRD 103 (133)
T ss_dssp EECCBCEEEGGGCCS
T ss_pred CeeEEEEEEHHHccC
Confidence 999999999998754
No 5
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.94 E-value=2.5e-25 Score=151.45 Aligned_cols=122 Identities=23% Similarity=0.330 Sum_probs=104.2
Q ss_pred cccEEEEEEEEEeEcCCCCCCCCCCcEEEEEECCE-EeeeeeeCCCCCeEecEEEEEEeCC----CCcEEEEEEeCCCCC
Q 031204 3 NLMGLLRVHVLRGVNLAVRDVVSSDPYVVIKMGKQ-LKTRVVKNNVNPEWNEDLTLSISDS----NLPIKLTVYDKDTFS 77 (164)
Q Consensus 3 ~~~g~L~v~v~~a~~L~~~~~~~~dpyv~v~~~~~-~~T~~~~~t~~P~w~e~~~f~~~~~----~~~l~i~v~d~~~~~ 77 (164)
...|.|.|+|++|++|+..+.+.+||||++++.++ ++|++++++.||.|||+|.|.+..+ ...|.|+|||++.++
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~ 83 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIG 83 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSSSCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSS
T ss_pred CCCcEEEEEEEEeeCCCCCCCCCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCCC
Confidence 46789999999999999887788999999999988 9999999999999999999999643 466999999999999
Q ss_pred CCceeEEEEEechhhhhhhcccccCCCCceEEEEeccCCCccccccceeEeeCCeEEEEEeEE---ecc----cceeeEE
Q 031204 78 LDDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLR---LRN----VEVGEVK 150 (164)
Q Consensus 78 ~~~~lG~~~v~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---l~~----~~~G~l~ 150 (164)
++++||++.+++.++..+... +.|++ |.+ ...|+|+
T Consensus 84 ~~~~lG~~~i~l~~l~~~~~~-------------------------------------~~w~~l~~l~~~~~~~~~G~l~ 126 (140)
T 2dmh_A 84 QNKLIGTATVALKDLTGDQSR-------------------------------------SLPYKLISLLNEKGQDTGATID 126 (140)
T ss_dssp SCCCCEEEEEEGGGTCSSSCE-------------------------------------EEEEEEEEEECTTCCEEEEEEE
T ss_pred CCceEEEEEEEHHHhccCCCc-------------------------------------eeEEeeeeccCCCCCCCCCEEE
Confidence 999999999999988664322 55655 433 3459999
Q ss_pred EEEEEEecCCC
Q 031204 151 IQLEWIDIPGS 161 (164)
Q Consensus 151 l~l~~~~~~~~ 161 (164)
|+++|.|.++-
T Consensus 127 l~~~~~p~~~~ 137 (140)
T 2dmh_A 127 LVIGYDPPSGP 137 (140)
T ss_dssp EEEEECCCBSS
T ss_pred EEEEEECCCCC
Confidence 99999987663
No 6
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.93 E-value=4.8e-25 Score=151.46 Aligned_cols=91 Identities=29% Similarity=0.503 Sum_probs=83.9
Q ss_pred CcccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEECCE-EeeeeeeCCCCCeEecEEEEEEeCCCCcEEEEEEeCCCC---
Q 031204 2 ENLMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGKQ-LKTRVVKNNVNPEWNEDLTLSISDSNLPIKLTVYDKDTF--- 76 (164)
Q Consensus 2 ~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~~-~~T~~~~~t~~P~w~e~~~f~~~~~~~~l~i~v~d~~~~--- 76 (164)
....|.|.|+|++|++|++.+ .+.+||||++.++++ ++|+++.++.||.|||+|.|.+..+...|.|+|||++..
T Consensus 13 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~ 92 (148)
T 3kwu_A 13 SKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKS 92 (148)
T ss_dssp --CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHH
T ss_pred cccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCccc
Confidence 456799999999999999998 889999999999999 999999999999999999999987777899999999985
Q ss_pred --------CCCceeEEEEEechhh
Q 031204 77 --------SLDDKMGDAEFYITPF 92 (164)
Q Consensus 77 --------~~~~~lG~~~v~l~~l 92 (164)
+++++||++.+++.++
T Consensus 93 ~~~~~~~~~~~~~lG~~~i~l~~l 116 (148)
T 3kwu_A 93 RVKQRFKRESDDFLGQTIIEVRTL 116 (148)
T ss_dssp HHHTTTSSCSSEEEEEEEEEGGGC
T ss_pred cccccccCCCCccEEEEEEEHHHC
Confidence 7899999999999887
No 7
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.93 E-value=5.6e-25 Score=147.13 Aligned_cols=115 Identities=23% Similarity=0.423 Sum_probs=100.0
Q ss_pred cEEEEEEEEEeEcCCCC---C-CCCCCcEEEEEECC---E-EeeeeeeCCCCCeEecEEEEEEeCC-CCcEEEEEEeCCC
Q 031204 5 MGLLRVHVLRGVNLAVR---D-VVSSDPYVVIKMGK---Q-LKTRVVKNNVNPEWNEDLTLSISDS-NLPIKLTVYDKDT 75 (164)
Q Consensus 5 ~g~L~v~v~~a~~L~~~---~-~~~~dpyv~v~~~~---~-~~T~~~~~t~~P~w~e~~~f~~~~~-~~~l~i~v~d~~~ 75 (164)
.|.|.|+|++|++|+.+ + .+.+||||++.+.+ . ++|++++++.||.|||+|.|.+..+ ...|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 48999999999999985 4 68999999999985 5 9999999999999999999999644 4569999999998
Q ss_pred CCCCceeEEEEEechhhhhhhcccccCCCCceEEEEeccCCCccccccceeEeeCCeEEEEEeEEecccceeeEEEEEEE
Q 031204 76 FSLDDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLRNVEVGEVKIQLEW 155 (164)
Q Consensus 76 ~~~~~~lG~~~v~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~G~l~l~l~~ 155 (164)
. ++++||++.+++.++..+.. .+.|++|.....|+|+++++.
T Consensus 82 ~-~~~~iG~~~i~l~~l~~~~~-------------------------------------~~~~~~L~~~~~g~i~~~le~ 123 (126)
T 1rlw_A 82 V-MDETLGTATFTVSSMKVGEK-------------------------------------KEVPFIFNQVTEMVLEMSLEV 123 (126)
T ss_dssp S-CCEEEEEEEEEGGGSCTTCE-------------------------------------EEEEEEETTTEEEEEEEEEEC
T ss_pred C-CCceeEEEEEEHHHccCCCc-------------------------------------EEEEEEcCCCceEEEEEEEEe
Confidence 8 59999999999998865432 389999998888999998876
Q ss_pred Ee
Q 031204 156 ID 157 (164)
Q Consensus 156 ~~ 157 (164)
.|
T Consensus 124 ~~ 125 (126)
T 1rlw_A 124 AS 125 (126)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 8
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.93 E-value=3.7e-24 Score=150.83 Aligned_cols=125 Identities=22% Similarity=0.379 Sum_probs=103.0
Q ss_pred ccEEEEEEEEEeEcCCCC-CCCCCCcEEEEEECCE-EeeeeeeCCCCCeEecEEEEEEeCCCCcEEEEEEeCCCCCCCce
Q 031204 4 LMGLLRVHVLRGVNLAVR-DVVSSDPYVVIKMGKQ-LKTRVVKNNVNPEWNEDLTLSISDSNLPIKLTVYDKDTFSLDDK 81 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~-~~~~~dpyv~v~~~~~-~~T~~~~~t~~P~w~e~~~f~~~~~~~~l~i~v~d~~~~~~~~~ 81 (164)
..++|.|+|++|++|+.. +.+.+||||++.++++ ++|++++++.||.|||+|.|.+. +...|.|+|||++.++++++
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~-~~~~L~~~V~D~d~~~~dd~ 112 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVT-PVSKLHFRVWSHQTLKSDVL 112 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEEC-TTCEEEEEEEECCSSSCCEE
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeC-CCCEEEEEEEECCCCCCCce
Confidence 578999999999999944 4566999999999999 99999999999999999999985 57779999999999999999
Q ss_pred eEEEEEechhhhhhhcccccCCCCceEEEEeccCCCccccccceeEeeCCeEEEEEeEEeccc-----ceeeEEEEEEEE
Q 031204 82 MGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLRNV-----EVGEVKIQLEWI 156 (164)
Q Consensus 82 lG~~~v~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~-----~~G~l~l~l~~~ 156 (164)
||++.+++.++......... ..+.|+.|... ..|+|++.|.++
T Consensus 113 lG~~~i~l~~l~~~~~~~~~--------------------------------~~~~~~~L~~~~~~~~~~G~L~v~l~~l 160 (173)
T 2nq3_A 113 LGTAALDIYETLKSNNMKLE--------------------------------EVVVTLQLGGDKEPTETIGDLSICLDGL 160 (173)
T ss_dssp EEEEEEEHHHHHHHTTTEES--------------------------------SEEEEEEEEESSCTTSEEEEEEEEEESE
T ss_pred EEEEEEEHHHhcccCCCCcc--------------------------------eeEEEEECccCCCCCcccEEEEEEEeee
Confidence 99999999998875422000 01567777653 579999999999
Q ss_pred ecCCC
Q 031204 157 DIPGS 161 (164)
Q Consensus 157 ~~~~~ 161 (164)
++...
T Consensus 161 ~~~~~ 165 (173)
T 2nq3_A 161 QLESE 165 (173)
T ss_dssp ECC--
T ss_pred ecchh
Confidence 98654
No 9
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.92 E-value=8.6e-25 Score=150.94 Aligned_cols=94 Identities=27% Similarity=0.578 Sum_probs=80.2
Q ss_pred cccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEECC------E-EeeeeeeCCCCCeEecEEEEEEeCCCCcEEEEEEeCC
Q 031204 3 NLMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK------Q-LKTRVVKNNVNPEWNEDLTLSISDSNLPIKLTVYDKD 74 (164)
Q Consensus 3 ~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~------~-~~T~~~~~t~~P~w~e~~~f~~~~~~~~l~i~v~d~~ 74 (164)
...+.|+|+|++|++|+..+ .+.+||||++.+.+ . ++|++++++.||.|||+|.|.+......|.|+|||++
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~d~d 96 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFDEN 96 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEEECC
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEEECC
Confidence 46789999999999999988 78999999999973 4 8999999999999999999999877777999999999
Q ss_pred CCCCCceeEEEEEechhhhhhh
Q 031204 75 TFSLDDKMGDAEFYITPFLEAL 96 (164)
Q Consensus 75 ~~~~~~~lG~~~v~l~~l~~~~ 96 (164)
.++++++||++.+++.++..+.
T Consensus 97 ~~~~d~~iG~~~i~l~~l~~~~ 118 (153)
T 3b7y_A 97 RLTRDDFLGQVDVPLYPLPTEN 118 (153)
T ss_dssp SSSCCEEEEEEEEECCSCCBCC
T ss_pred CCcCCCeeEEEEEEHHHcccCC
Confidence 9989999999999999887643
No 10
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.92 E-value=2.6e-24 Score=151.95 Aligned_cols=126 Identities=22% Similarity=0.440 Sum_probs=95.9
Q ss_pred CcccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEECC------E-EeeeeeeCCCCCeEecEEEEEEeCCCCcEEEEEEeC
Q 031204 2 ENLMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK------Q-LKTRVVKNNVNPEWNEDLTLSISDSNLPIKLTVYDK 73 (164)
Q Consensus 2 ~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~------~-~~T~~~~~t~~P~w~e~~~f~~~~~~~~l~i~v~d~ 73 (164)
....|.|.|+|++|++|+..+ .+.+||||++.+.+ . ++|++++++.||.|||+|.|.+......|.|+|||+
T Consensus 4 ~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d~ 83 (176)
T 3m7f_B 4 NDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFDE 83 (176)
T ss_dssp CTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEEC
T ss_pred CCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEEC
Confidence 357899999999999999988 78999999999975 5 899999999999999999999986667899999999
Q ss_pred CCCCCCceeEEEEEechhhhhhhcccccCCCCceEEEEeccCCCccccccceeEeeCCeEEEEEeEEecc-----cceee
Q 031204 74 DTFSLDDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLRN-----VEVGE 148 (164)
Q Consensus 74 ~~~~~~~~lG~~~v~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~-----~~~G~ 148 (164)
+.++++++||++.++|.++....... . ......|+.|.. ...|+
T Consensus 84 d~~~~d~~lG~~~i~l~~l~~~~~~~-------~------------------------~~~~~~w~~L~~~~~~~~~~G~ 132 (176)
T 3m7f_B 84 NRLTRDDFLGQVDVPLYPLPTENPRM-------E------------------------RPYTFKDFVLHPRSHKSRVKGY 132 (176)
T ss_dssp C----CEEEEEEEEESCSCCBC-------------------------------------CCCCEEEECBCSSTTCCCCSE
T ss_pred CCCCCCcEEEEEEEEHHHccccCCcc-------c------------------------ccccccEEEccccCCCCccCEE
Confidence 99989999999999999887643210 0 000014666653 24799
Q ss_pred EEEEEEEEec
Q 031204 149 VKIQLEWIDI 158 (164)
Q Consensus 149 l~l~l~~~~~ 158 (164)
|+|++.|+|.
T Consensus 133 l~l~l~~~p~ 142 (176)
T 3m7f_B 133 LRLKMTYLPK 142 (176)
T ss_dssp EEEEEEECC-
T ss_pred EEEEEEEEeC
Confidence 9999999986
No 11
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.90 E-value=1.1e-22 Score=137.07 Aligned_cols=91 Identities=24% Similarity=0.417 Sum_probs=81.1
Q ss_pred ccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEECC--E-EeeeeeeCCCCCeEecEEEEEEeCCCCcEEEEEEeCCCCCC-
Q 031204 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK--Q-LKTRVVKNNVNPEWNEDLTLSISDSNLPIKLTVYDKDTFSL- 78 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~--~-~~T~~~~~t~~P~w~e~~~f~~~~~~~~l~i~v~d~~~~~~- 78 (164)
....|+|+|++|++|++.+ .+.+||||++.+.+ + ++|++++++.||.|||+|.|.+.... .|.|+|||++.+++
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~~~~ 81 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD-SITISVWNHKKIHKK 81 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC-CEEEEEEEGGGTTSS
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC-EEEEEEEECCCCCCC
Confidence 3568999999999999998 88999999999975 4 99999999999999999999997654 59999999998865
Q ss_pred --CceeEEEEEechhhhhh
Q 031204 79 --DDKMGDAEFYITPFLEA 95 (164)
Q Consensus 79 --~~~lG~~~v~l~~l~~~ 95 (164)
|++||++.+++.++...
T Consensus 82 ~~d~~lG~~~i~l~~l~~~ 100 (132)
T 3pyc_A 82 QGAGFLGCVRLLSNAISRL 100 (132)
T ss_dssp TTTTEEEEEEECHHHHHHH
T ss_pred CCCCceEEEEEeHHHhhcc
Confidence 89999999999988543
No 12
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.89 E-value=2.5e-22 Score=135.89 Aligned_cols=92 Identities=23% Similarity=0.317 Sum_probs=80.3
Q ss_pred ccEEEEEEEEEeEcCCCCCCCCCCcEEEEEEC-----CE-EeeeeeeCCCCCeEecEEEEE-EeC---CCCcEEEEEEeC
Q 031204 4 LMGLLRVHVLRGVNLAVRDVVSSDPYVVIKMG-----KQ-LKTRVVKNNVNPEWNEDLTLS-ISD---SNLPIKLTVYDK 73 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~~~~~dpyv~v~~~-----~~-~~T~~~~~t~~P~w~e~~~f~-~~~---~~~~l~i~v~d~ 73 (164)
..+.|.|+|++|++|+....+.+||||++++. .. ++|++++++.||.|||+|.|. +.. ....|.|+|||+
T Consensus 18 ~~~~L~V~V~~a~~L~~~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~ 97 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVTEDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSA 97 (134)
T ss_dssp ETTEEEEEEEEEECCCCTTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEEC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEEC
Confidence 46799999999999997337899999999982 34 999999999999999999999 653 346799999999
Q ss_pred CCCCCCceeEEEEEechhhhhh
Q 031204 74 DTFSLDDKMGDAEFYITPFLEA 95 (164)
Q Consensus 74 ~~~~~~~~lG~~~v~l~~l~~~ 95 (164)
+.++++++||++.+++.++..+
T Consensus 98 d~~~~~~~lG~~~i~l~~l~~~ 119 (134)
T 2b3r_A 98 ESLRENFFLGGITLPLKDFNLS 119 (134)
T ss_dssp CSSSCCEEEEEEEEEGGGSCTT
T ss_pred CCCCCCcEEEEEEEEhhhccCC
Confidence 9998999999999999988654
No 13
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.88 E-value=9.3e-23 Score=140.21 Aligned_cols=91 Identities=34% Similarity=0.488 Sum_probs=81.8
Q ss_pred cEEEEEEEEEeEcCCCCC-CCCCCcEEEEEECC-----E-EeeeeeeCCCCCeEecEEEEEEeCC--CCcEEEEEEeCCC
Q 031204 5 MGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK-----Q-LKTRVVKNNVNPEWNEDLTLSISDS--NLPIKLTVYDKDT 75 (164)
Q Consensus 5 ~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~-----~-~~T~~~~~t~~P~w~e~~~f~~~~~--~~~l~i~v~d~~~ 75 (164)
.+.|.|+|++|++|+..+ .+.+||||++++.+ . ++|++++++.||.|||+|.|.+... ...|.|+|||++.
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 109 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 109 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC
Confidence 478999999999999988 78999999999973 3 9999999999999999999999754 3569999999999
Q ss_pred CCCCceeEEEEEechhhhhh
Q 031204 76 FSLDDKMGDAEFYITPFLEA 95 (164)
Q Consensus 76 ~~~~~~lG~~~v~l~~l~~~ 95 (164)
++++++||++.+++.++..+
T Consensus 110 ~~~~~~iG~~~i~l~~l~~~ 129 (149)
T 1a25_A 110 TSRNDFMGSLSFGISELQKA 129 (149)
T ss_dssp SSCCEEEEEEEEEHHHHTTC
T ss_pred CCCCCEEEEEEEEHHHhCcC
Confidence 98999999999999988653
No 14
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.88 E-value=2.5e-22 Score=135.93 Aligned_cols=91 Identities=30% Similarity=0.491 Sum_probs=81.8
Q ss_pred cEEEEEEEEEeEcCCCCC-CCCCCcEEEEEEC-----CE-EeeeeeeCCCCCeEecEEEEEEeCC--CCcEEEEEEeCCC
Q 031204 5 MGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG-----KQ-LKTRVVKNNVNPEWNEDLTLSISDS--NLPIKLTVYDKDT 75 (164)
Q Consensus 5 ~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~-----~~-~~T~~~~~t~~P~w~e~~~f~~~~~--~~~l~i~v~d~~~ 75 (164)
.|.|.|+|++|++|+..+ .+.+||||++.+. .. ++|++++++.||.|||+|.|.+... ...|.|+|||++.
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~ 94 (137)
T 3rdl_A 15 DEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDR 94 (137)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCC
Confidence 578999999999999988 8899999999993 34 9999999999999999999998643 3469999999999
Q ss_pred CCCCceeEEEEEechhhhhh
Q 031204 76 FSLDDKMGDAEFYITPFLEA 95 (164)
Q Consensus 76 ~~~~~~lG~~~v~l~~l~~~ 95 (164)
++++++||++.+++.++...
T Consensus 95 ~~~~~~iG~~~i~l~~l~~~ 114 (137)
T 3rdl_A 95 TTRNDFMGSLSFGVSELMKM 114 (137)
T ss_dssp SSCCEEEEEEEEEHHHHHHS
T ss_pred CCCCceEEEEEEeHHHhccC
Confidence 98999999999999999764
No 15
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.87 E-value=7.6e-22 Score=136.09 Aligned_cols=92 Identities=28% Similarity=0.423 Sum_probs=81.7
Q ss_pred ccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEEC---CE-EeeeeeeCCCCCeEecEEEEEEeCC---CCcEEEEEEeCCC
Q 031204 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG---KQ-LKTRVVKNNVNPEWNEDLTLSISDS---NLPIKLTVYDKDT 75 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~---~~-~~T~~~~~t~~P~w~e~~~f~~~~~---~~~l~i~v~d~~~ 75 (164)
..+.|.|+|++|++|+..+ .+.+||||++.+. .. ++|++++++.||.|||+|.|.+... ...|.|+|||++.
T Consensus 40 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 119 (152)
T 1rsy_A 40 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR 119 (152)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS
T ss_pred CCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCC
Confidence 4678999999999999988 7899999999994 34 9999999999999999999988532 4679999999999
Q ss_pred CCCCceeEEEEEechhhhhh
Q 031204 76 FSLDDKMGDAEFYITPFLEA 95 (164)
Q Consensus 76 ~~~~~~lG~~~v~l~~l~~~ 95 (164)
++++++||++.+++.++..+
T Consensus 120 ~~~~~~iG~~~i~l~~l~~~ 139 (152)
T 1rsy_A 120 FSKHDIIGEFKVPMNTVDFG 139 (152)
T ss_dssp SSCCEEEEEEEEEGGGCCCS
T ss_pred CCCCcEEEEEEEEchhccCC
Confidence 98999999999999988553
No 16
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.87 E-value=6e-21 Score=154.22 Aligned_cols=122 Identities=31% Similarity=0.465 Sum_probs=105.1
Q ss_pred cccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEECCE-EeeeeeeCCCCCeEecEEEEEEeCCC-CcEEEEEEeCCCCCCC
Q 031204 3 NLMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGKQ-LKTRVVKNNVNPEWNEDLTLSISDSN-LPIKLTVYDKDTFSLD 79 (164)
Q Consensus 3 ~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~~-~~T~~~~~t~~P~w~e~~~f~~~~~~-~~l~i~v~d~~~~~~~ 79 (164)
...|+|.|+|++|++|++.+ +|.+||||++.+++. ++|++++++.||.|||+|.|.+..+. ..|.|+|||++.+++|
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~ 463 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPD 463 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSC
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCC
Confidence 35689999999999999998 889999999999998 99999999999999999999997654 5699999999999999
Q ss_pred ceeEEEEEechhhhhhhcccccCCCCceEEEEeccCCCccccccceeEeeCCeEEEEEeEEecccceeeEEEEEEEEe
Q 031204 80 DKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLRNVEVGEVKIQLEWID 157 (164)
Q Consensus 80 ~~lG~~~v~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~G~l~l~l~~~~ 157 (164)
++||++.+++.++..+... .+ ..+.|+.+.+..+|+|+|++++.-
T Consensus 464 d~lG~~~~~l~~l~~~~~~-------------------------------~~--~~~~~~~l~~~~~G~i~l~~~l~l 508 (510)
T 3jzy_A 464 DFLGRTEIPVAKIRTEQES-------------------------------KG--PMTRRLLLHEVPTGEVWVRFDLQL 508 (510)
T ss_dssp CEEEEEEEEHHHHHHHHHH-------------------------------HC--SCCEEEECBSSSSCEEEEEEEEEE
T ss_pred CceEEEEEEHHHhccccCC-------------------------------CC--ceeeeecCCCCCCceEEEEEEEEE
Confidence 9999999999999875431 00 126789999999999999887643
No 17
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.87 E-value=1.8e-21 Score=134.42 Aligned_cols=91 Identities=23% Similarity=0.408 Sum_probs=80.6
Q ss_pred ccEEEEEEEEEeEcCCCCCCCCCCcEEEEEECC-----E-EeeeeeeCCCCCeEecEEEEEEe--CCCCcEEEEEEeCCC
Q 031204 4 LMGLLRVHVLRGVNLAVRDVVSSDPYVVIKMGK-----Q-LKTRVVKNNVNPEWNEDLTLSIS--DSNLPIKLTVYDKDT 75 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~~~~~dpyv~v~~~~-----~-~~T~~~~~t~~P~w~e~~~f~~~--~~~~~l~i~v~d~~~ 75 (164)
..+.|.|+|++|++|+..+.+.+||||++.+.+ . ++|++++++.||.|||+|.|.+. .....|.|+|||++.
T Consensus 25 ~~~~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 104 (153)
T 3fbk_A 25 QDRVLLLHIIEGKGLISKQPGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRAS 104 (153)
T ss_dssp SSSEEEEEEEEEESCCCCSSSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECCS
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCCC
Confidence 568899999999999998878899999999842 3 99999999999999999999983 344569999999999
Q ss_pred CCC-CceeEEEEEechhhhh
Q 031204 76 FSL-DDKMGDAEFYITPFLE 94 (164)
Q Consensus 76 ~~~-~~~lG~~~v~l~~l~~ 94 (164)
+++ +++||++.+++.++..
T Consensus 105 ~~~~d~~lG~~~i~l~~l~~ 124 (153)
T 3fbk_A 105 QSRQSGLIGCMSFGVKSLLT 124 (153)
T ss_dssp SGGGCEEEEEEEEEHHHHTC
T ss_pred CCCCCcEEEEEEEEHHHhcC
Confidence 876 8999999999999864
No 18
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.86 E-value=7.9e-22 Score=134.58 Aligned_cols=93 Identities=28% Similarity=0.412 Sum_probs=82.5
Q ss_pred ccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEEC---CE-EeeeeeeCCCCCeEecEEEEEEeCC---CCcEEEEEEeCCC
Q 031204 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG---KQ-LKTRVVKNNVNPEWNEDLTLSISDS---NLPIKLTVYDKDT 75 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~---~~-~~T~~~~~t~~P~w~e~~~f~~~~~---~~~l~i~v~d~~~ 75 (164)
..+.|.|+|++|++|+..+ .+.+||||++++. .. ++|++++++.||.|||+|.|.+... ...|.|+|||++.
T Consensus 32 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 111 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR 111 (143)
T ss_dssp TTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS
T ss_pred CCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCC
Confidence 5678999999999999988 7899999999993 34 9999999999999999999998633 3679999999999
Q ss_pred CCCCceeEEEEEechhhhhhh
Q 031204 76 FSLDDKMGDAEFYITPFLEAL 96 (164)
Q Consensus 76 ~~~~~~lG~~~v~l~~l~~~~ 96 (164)
++++++||++.+++.++..+.
T Consensus 112 ~~~~~~iG~~~i~l~~l~~~~ 132 (143)
T 3f04_A 112 FSKHDIIGEFKVPMNTVDFGH 132 (143)
T ss_dssp SSCCEEEEEEEEEGGGCCTTS
T ss_pred CCCCceEEEEEEEHHHccCCC
Confidence 999999999999999886653
No 19
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=1.4e-21 Score=133.07 Aligned_cols=93 Identities=28% Similarity=0.434 Sum_probs=81.8
Q ss_pred ccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEECC---E-EeeeeeeCCCCCeEecEEEEEEeC----CCCcEEEEEEeCC
Q 031204 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK---Q-LKTRVVKNNVNPEWNEDLTLSISD----SNLPIKLTVYDKD 74 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~---~-~~T~~~~~t~~P~w~e~~~f~~~~----~~~~l~i~v~d~~ 74 (164)
..+.|.|+|++|++|+..+ .+.+||||++++.+ . ++|++++++.||.|||+|.|.+.. ....|.|+|||++
T Consensus 24 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d 103 (141)
T 2d8k_A 24 QESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYD 103 (141)
T ss_dssp SSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECC
T ss_pred CCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECC
Confidence 5688999999999999988 78999999999952 3 999999999999999999998632 2466999999999
Q ss_pred CCCCCceeEEEEEechhhhhhh
Q 031204 75 TFSLDDKMGDAEFYITPFLEAL 96 (164)
Q Consensus 75 ~~~~~~~lG~~~v~l~~l~~~~ 96 (164)
.++++++||++.+++.++..+.
T Consensus 104 ~~~~~~~iG~~~i~l~~l~~~~ 125 (141)
T 2d8k_A 104 RFSRNDPIGEVSIPLNKVDLTQ 125 (141)
T ss_dssp SSSSCEEEEEEEEETTTSCTTS
T ss_pred CCCCCcEEEEEEEEhhhhcCCC
Confidence 9989999999999999886643
No 20
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.86 E-value=1.1e-21 Score=134.70 Aligned_cols=95 Identities=27% Similarity=0.397 Sum_probs=83.3
Q ss_pred ccEEEEEEEEEeEcCCCCC--CCCCCcEEEEEECC-----E-EeeeeeeCCCCCeEecEEEEEEeCC---CCcEEEEEEe
Q 031204 4 LMGLLRVHVLRGVNLAVRD--VVSSDPYVVIKMGK-----Q-LKTRVVKNNVNPEWNEDLTLSISDS---NLPIKLTVYD 72 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~--~~~~dpyv~v~~~~-----~-~~T~~~~~t~~P~w~e~~~f~~~~~---~~~l~i~v~d 72 (164)
..+.|.|+|++|++|+..+ .+.+||||++.+.+ . ++|++++++.||.|||+|.|.+... ...|.|+|||
T Consensus 21 ~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d 100 (148)
T 3fdw_A 21 QTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWH 100 (148)
T ss_dssp TTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEE
Confidence 4688999999999999877 67899999999972 2 8999999999999999999998754 3459999999
Q ss_pred CCCCCCCceeEEEEEechhhhhhhcc
Q 031204 73 KDTFSLDDKMGDAEFYITPFLEALKM 98 (164)
Q Consensus 73 ~~~~~~~~~lG~~~v~l~~l~~~~~~ 98 (164)
++.++++++||++.+++.++..+...
T Consensus 101 ~d~~~~~~~iG~~~i~l~~l~~~~~~ 126 (148)
T 3fdw_A 101 HGRFGRNTFLGEAEIQMDSWKLDKKL 126 (148)
T ss_dssp ECGGGCEEEEEEEEEEHHHHHHHCCS
T ss_pred CCCCcCCcEEEEEEEEcccccccCCc
Confidence 99998999999999999999876533
No 21
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.86 E-value=6.7e-21 Score=143.45 Aligned_cols=92 Identities=27% Similarity=0.409 Sum_probs=82.1
Q ss_pred ccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEECC---E-EeeeeeeCCCCCeEecEEEEEEeCC---CCcEEEEEEeCCC
Q 031204 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK---Q-LKTRVVKNNVNPEWNEDLTLSISDS---NLPIKLTVYDKDT 75 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~---~-~~T~~~~~t~~P~w~e~~~f~~~~~---~~~l~i~v~d~~~ 75 (164)
..+.|.|+|++|++|+.++ .+.+||||++.+.+ . ++|++++++.||.|||+|.|.+... ...|.|+|||++.
T Consensus 17 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~ 96 (284)
T 2r83_A 17 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDR 96 (284)
T ss_dssp TTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCS
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCC
Confidence 5689999999999999988 78999999999964 3 8999999999999999999998642 3579999999999
Q ss_pred CCCCceeEEEEEechhhhhh
Q 031204 76 FSLDDKMGDAEFYITPFLEA 95 (164)
Q Consensus 76 ~~~~~~lG~~~v~l~~l~~~ 95 (164)
++++++||++.+++.++..+
T Consensus 97 ~~~~~~lG~~~i~l~~l~~~ 116 (284)
T 2r83_A 97 FSKHDIIGEFKVPMNTVDFG 116 (284)
T ss_dssp SSCCCEEEEEEEEGGGCCCS
T ss_pred CCCCceeEEEEEcchhcccC
Confidence 98999999999999988654
No 22
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.86 E-value=7.5e-22 Score=136.69 Aligned_cols=90 Identities=14% Similarity=0.175 Sum_probs=81.3
Q ss_pred ccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEECC---E----EeeeeeeCCCCCeEecEEEEEEeCC---CCcEEEEEEe
Q 031204 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK---Q----LKTRVVKNNVNPEWNEDLTLSISDS---NLPIKLTVYD 72 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~---~----~~T~~~~~t~~P~w~e~~~f~~~~~---~~~l~i~v~d 72 (164)
..+.|+|+|++|++|++++ .+.+||||++++.+ . ++|++++++.||.|||+|.|.+... ...|.|+|||
T Consensus 41 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d 120 (155)
T 2z0u_A 41 KNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCT 120 (155)
T ss_dssp TTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEE
T ss_pred CCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEE
Confidence 4678999999999999998 88999999999965 2 9999999999999999999998642 3579999999
Q ss_pred CCCCCCCceeEEEEEechhhh
Q 031204 73 KDTFSLDDKMGDAEFYITPFL 93 (164)
Q Consensus 73 ~~~~~~~~~lG~~~v~l~~l~ 93 (164)
++.++++++||++.+++.++.
T Consensus 121 ~d~~~~~d~iG~~~i~l~~l~ 141 (155)
T 2z0u_A 121 TDRSHLEECLGGAQISLAEVC 141 (155)
T ss_dssp ECTTSCEEEEEEEEEECTTSC
T ss_pred CCCCCCCcEEEEEEEEHHHcc
Confidence 999999999999999999885
No 23
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.86 E-value=1.9e-21 Score=130.35 Aligned_cols=91 Identities=23% Similarity=0.377 Sum_probs=75.5
Q ss_pred ccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEEC-----CE-EeeeeeeCCCCCeEecEEEEEEeC----CCCcEEEEEEe
Q 031204 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG-----KQ-LKTRVVKNNVNPEWNEDLTLSISD----SNLPIKLTVYD 72 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~-----~~-~~T~~~~~t~~P~w~e~~~f~~~~----~~~~l~i~v~d 72 (164)
..+.|.|+|++|++|+..+ .+.+||||++.+. .. ++|++++++.||.|||+|.|.+.. ....|.|+|||
T Consensus 16 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d 95 (129)
T 2bwq_A 16 VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWD 95 (129)
T ss_dssp TTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEE
Confidence 4588999999999999988 7889999999993 33 999999999999999999999532 23579999999
Q ss_pred CCCCCC--CceeEEEEEechhhhh
Q 031204 73 KDTFSL--DDKMGDAEFYITPFLE 94 (164)
Q Consensus 73 ~~~~~~--~~~lG~~~v~l~~l~~ 94 (164)
++.+++ +++||++.+++.++..
T Consensus 96 ~d~~~~~~~~~lG~~~i~l~~l~~ 119 (129)
T 2bwq_A 96 QARVREEESEFLGEILIELETALL 119 (129)
T ss_dssp C-------CEEEEEEEEEGGGCCC
T ss_pred CCcCcCcCCceeEEEEEEccccCC
Confidence 999876 9999999999998765
No 24
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.86 E-value=4.4e-22 Score=135.61 Aligned_cols=92 Identities=32% Similarity=0.498 Sum_probs=80.9
Q ss_pred cEEEEEEEEEeEcCCCCC-CCCCCcEEEEEECC--------------E-EeeeeeeCCCCCeEecEEEEE-EeC---CCC
Q 031204 5 MGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK--------------Q-LKTRVVKNNVNPEWNEDLTLS-ISD---SNL 64 (164)
Q Consensus 5 ~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~--------------~-~~T~~~~~t~~P~w~e~~~f~-~~~---~~~ 64 (164)
.|.|.|+|++|++|+.++ .+.+||||++++.+ . ++|++++++.||.|||+|.|. +.. ...
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 478999999999999998 88999999999985 3 789999999999999999997 532 345
Q ss_pred cEEEEEEeCCCCCCCceeEEEEEechhhhhhh
Q 031204 65 PIKLTVYDKDTFSLDDKMGDAEFYITPFLEAL 96 (164)
Q Consensus 65 ~l~i~v~d~~~~~~~~~lG~~~v~l~~l~~~~ 96 (164)
.|.|+|||++.++++++||++.+++.++....
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~ 128 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLD 128 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGGT
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccCC
Confidence 79999999999989999999999999886643
No 25
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.85 E-value=2.4e-21 Score=132.03 Aligned_cols=93 Identities=26% Similarity=0.493 Sum_probs=82.4
Q ss_pred ccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEECC-----E-EeeeeeeCCCCCeEecEEEEE-EeCC---CCcEEEEEEe
Q 031204 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK-----Q-LKTRVVKNNVNPEWNEDLTLS-ISDS---NLPIKLTVYD 72 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~-----~-~~T~~~~~t~~P~w~e~~~f~-~~~~---~~~l~i~v~d 72 (164)
..+.|.|+|++|++|+..+ .+.+||||++++.+ . ++|++++++.||.|||+|.|. +... ...|.|+|||
T Consensus 27 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d 106 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCD 106 (142)
T ss_dssp GGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEE
Confidence 5678999999999999998 78999999999975 3 999999999999999999998 5422 2579999999
Q ss_pred CCCCCCCceeEEEEEechhhhhhh
Q 031204 73 KDTFSLDDKMGDAEFYITPFLEAL 96 (164)
Q Consensus 73 ~~~~~~~~~lG~~~v~l~~l~~~~ 96 (164)
++.++++++||++.+++.++..+.
T Consensus 107 ~d~~~~d~~iG~~~i~l~~l~~~~ 130 (142)
T 2chd_A 107 EDKFGHNEFIGETRFSLKKLKANQ 130 (142)
T ss_dssp ECTTSCEEEEEEEEEEGGGCCTTC
T ss_pred CCCCCCCcEEEEEEEEHHHcCCCC
Confidence 999989999999999999987654
No 26
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.85 E-value=3.4e-21 Score=135.37 Aligned_cols=92 Identities=22% Similarity=0.350 Sum_probs=81.4
Q ss_pred ccEEEEEEEEEeEcCCCCC--CCCCCcEEEEEECC-----E-EeeeeeeCCCCCeEecEEEEEEeCCCCcEEEEEE-eCC
Q 031204 4 LMGLLRVHVLRGVNLAVRD--VVSSDPYVVIKMGK-----Q-LKTRVVKNNVNPEWNEDLTLSISDSNLPIKLTVY-DKD 74 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~--~~~~dpyv~v~~~~-----~-~~T~~~~~t~~P~w~e~~~f~~~~~~~~l~i~v~-d~~ 74 (164)
..|.|.|+|++|++|+.++ .+.+||||++++.+ . ++|++++++.||.|||+|.|.+......|.|+|| |++
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d 107 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYG 107 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECS
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCC
Confidence 3578999999999999988 58999999999863 2 8999999999999999999998766667999999 999
Q ss_pred CCCCCceeEEEEEechhhhhh
Q 031204 75 TFSLDDKMGDAEFYITPFLEA 95 (164)
Q Consensus 75 ~~~~~~~lG~~~v~l~~l~~~ 95 (164)
.++++++||++.+++.++..+
T Consensus 108 ~~~~d~~iG~~~i~l~~l~~~ 128 (171)
T 2q3x_A 108 RMDHKCFMGVAQILLEELDLS 128 (171)
T ss_dssp TTCSSEEEEEEEECGGGSCTT
T ss_pred CCCCCCEEEEEEEEHHHcccC
Confidence 998999999999999988653
No 27
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.85 E-value=1.5e-21 Score=132.70 Aligned_cols=91 Identities=23% Similarity=0.377 Sum_probs=79.4
Q ss_pred ccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEEC-----CE-EeeeeeeCCCCCeEecEEEEEEeC-C---CCcEEEEEEe
Q 031204 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG-----KQ-LKTRVVKNNVNPEWNEDLTLSISD-S---NLPIKLTVYD 72 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~-----~~-~~T~~~~~t~~P~w~e~~~f~~~~-~---~~~l~i~v~d 72 (164)
..+.|.|+|++|++|+.++ .+.+||||++++. .. ++|++++++.||.|||+|.|.+.. . ...|.|+|||
T Consensus 19 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d 98 (141)
T 1v27_A 19 VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWD 98 (141)
T ss_dssp TTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEE
T ss_pred CCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEE
Confidence 4578999999999999988 7899999999983 34 999999999999999999999532 2 3569999999
Q ss_pred CCCCCC--CceeEEEEEechhhhh
Q 031204 73 KDTFSL--DDKMGDAEFYITPFLE 94 (164)
Q Consensus 73 ~~~~~~--~~~lG~~~v~l~~l~~ 94 (164)
++.+++ +++||++.+++.++..
T Consensus 99 ~d~~~~~~~~~lG~~~i~l~~l~~ 122 (141)
T 1v27_A 99 QARVREEESEFLGEILIELETALL 122 (141)
T ss_dssp BCSSSSCCBCCCEEEEEEGGGCCC
T ss_pred CCCCcCCCCceEEEEEEEccccCC
Confidence 999876 8999999999988754
No 28
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.85 E-value=9.5e-21 Score=128.65 Aligned_cols=88 Identities=22% Similarity=0.270 Sum_probs=76.7
Q ss_pred ccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEEC---CE--EeeeeeeCCCCCeEecEEEEEEeCC---CCcEEEEEEeCC
Q 031204 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG---KQ--LKTRVVKNNVNPEWNEDLTLSISDS---NLPIKLTVYDKD 74 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~---~~--~~T~~~~~t~~P~w~e~~~f~~~~~---~~~l~i~v~d~~ 74 (164)
..+.|.|+|++|++ ++ .+.+||||++.+. +. ++|++++++.||.|||+|.|.+... ...|.|+|||++
T Consensus 24 ~~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d 100 (138)
T 1wfm_A 24 QKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCD 100 (138)
T ss_dssp TTTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECC
T ss_pred CCCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECC
Confidence 46789999999993 45 7899999999994 23 8999999999999999999998643 356999999999
Q ss_pred CCCCCceeEEEEEechhhhh
Q 031204 75 TFSLDDKMGDAEFYITPFLE 94 (164)
Q Consensus 75 ~~~~~~~lG~~~v~l~~l~~ 94 (164)
.++++++||++.+++.++..
T Consensus 101 ~~~~dd~lG~~~i~l~~l~~ 120 (138)
T 1wfm_A 101 RFSRHSVAGELRLGLDGTSV 120 (138)
T ss_dssp SSCTTSCSEEEEEESSSSSS
T ss_pred CCCCCcEEEEEEEEcccccC
Confidence 99999999999999998853
No 29
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.84 E-value=1.2e-20 Score=127.93 Aligned_cols=92 Identities=25% Similarity=0.438 Sum_probs=81.1
Q ss_pred ccEEEEEEEEEeEcCCCCC-C-CCCCcEEEEEECC---E-EeeeeeeCCCCCeEecEEEEE-EeCC---CCcEEEEEEeC
Q 031204 4 LMGLLRVHVLRGVNLAVRD-V-VSSDPYVVIKMGK---Q-LKTRVVKNNVNPEWNEDLTLS-ISDS---NLPIKLTVYDK 73 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~-~-~~~dpyv~v~~~~---~-~~T~~~~~t~~P~w~e~~~f~-~~~~---~~~l~i~v~d~ 73 (164)
..+.|.|+|++|++|+.++ . +.+||||++.+.+ . ++|++++++.||.|||+|.|. +... ...|.|+|||+
T Consensus 20 ~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~ 99 (138)
T 1ugk_A 20 ERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSF 99 (138)
T ss_dssp GGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEEC
Confidence 5678999999999999988 4 7899999999963 4 999999999999999999996 5432 35699999999
Q ss_pred CCCCCCceeEEEEEechhhhhh
Q 031204 74 DTFSLDDKMGDAEFYITPFLEA 95 (164)
Q Consensus 74 ~~~~~~~~lG~~~v~l~~l~~~ 95 (164)
+.++++++||++.+++.++..+
T Consensus 100 d~~~~~~~lG~~~i~l~~l~~~ 121 (138)
T 1ugk_A 100 DRFSRDDIIGEVLIPLSGIELS 121 (138)
T ss_dssp CSSCCCCCCEEEEEECTTCCCT
T ss_pred CCCCCCcEEEEEEEehhHccCC
Confidence 9998999999999999988664
No 30
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.84 E-value=1.4e-20 Score=130.54 Aligned_cols=91 Identities=30% Similarity=0.385 Sum_probs=80.5
Q ss_pred ccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEECC-----E-EeeeeeeCCCCCeEecEEEEEEeCC---CCcEEEEEEeC
Q 031204 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK-----Q-LKTRVVKNNVNPEWNEDLTLSISDS---NLPIKLTVYDK 73 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~-----~-~~T~~~~~t~~P~w~e~~~f~~~~~---~~~l~i~v~d~ 73 (164)
..|.|.|+|++|++|+..+ .+.+||||++++.+ . ++|++++++.||.|||+|.|.+... ...|.|+|||+
T Consensus 23 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 102 (159)
T 1tjx_A 23 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDY 102 (159)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEEC
T ss_pred CCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEEC
Confidence 4679999999999999998 78999999999862 3 8999999999999999999998643 34699999999
Q ss_pred CCCCCCceeEEEEEechhhhh
Q 031204 74 DTFSLDDKMGDAEFYITPFLE 94 (164)
Q Consensus 74 ~~~~~~~~lG~~~v~l~~l~~ 94 (164)
+.++++++||++.+++..+..
T Consensus 103 d~~~~~~~iG~~~i~l~~~~~ 123 (159)
T 1tjx_A 103 DKIGKNDAIGKVFVGYNSTGA 123 (159)
T ss_dssp CSSSCCEEEEEEEEETTCCHH
T ss_pred CCCCCCceEEEEEECCCCCCc
Confidence 999899999999999987543
No 31
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.84 E-value=1.9e-20 Score=130.80 Aligned_cols=91 Identities=32% Similarity=0.434 Sum_probs=81.7
Q ss_pred ccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEECC-----E-EeeeeeeCCCCCeEecEEEEEEeCC---CCcEEEEEEeC
Q 031204 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK-----Q-LKTRVVKNNVNPEWNEDLTLSISDS---NLPIKLTVYDK 73 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~-----~-~~T~~~~~t~~P~w~e~~~f~~~~~---~~~l~i~v~d~ 73 (164)
..+.|.|+|++|++|+..+ .+.+||||++++.+ . ++|++++++.||.|||+|.|.+... ...|.|+|||+
T Consensus 35 ~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 114 (166)
T 2cm5_A 35 QQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDY 114 (166)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEEC
Confidence 4678999999999999988 88999999999975 4 9999999999999999999998643 35799999999
Q ss_pred CCCCCCceeEEEEEechhhhh
Q 031204 74 DTFSLDDKMGDAEFYITPFLE 94 (164)
Q Consensus 74 ~~~~~~~~lG~~~v~l~~l~~ 94 (164)
+.++++++||++.+++.++..
T Consensus 115 d~~~~~~~iG~~~i~l~~~~~ 135 (166)
T 2cm5_A 115 DIGKSNDYIGGCQLGISAKGE 135 (166)
T ss_dssp CSSSCCEEEEEEEEETTCCHH
T ss_pred CCCCCCcEEEeEEEecccCCc
Confidence 999899999999999998654
No 32
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.84 E-value=8.6e-21 Score=128.42 Aligned_cols=92 Identities=29% Similarity=0.367 Sum_probs=81.6
Q ss_pred ccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEECC-----E-EeeeeeeCCCCCeEecEEEEEEeCCC---CcEEEEEEeC
Q 031204 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK-----Q-LKTRVVKNNVNPEWNEDLTLSISDSN---LPIKLTVYDK 73 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~-----~-~~T~~~~~t~~P~w~e~~~f~~~~~~---~~l~i~v~d~ 73 (164)
..|.|.|+|++|++|+..+ .+.+||||++++.+ . ++|++++++.||.|||+|.|.+.... ..|.|+|||+
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~ 93 (138)
T 3n5a_A 14 SANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDK 93 (138)
T ss_dssp TTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEEC
T ss_pred CCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEEC
Confidence 5688999999999999988 78999999999863 3 89999999999999999999986543 4699999999
Q ss_pred CCCCCCceeEEEEEechhhhhh
Q 031204 74 DTFSLDDKMGDAEFYITPFLEA 95 (164)
Q Consensus 74 ~~~~~~~~lG~~~v~l~~l~~~ 95 (164)
+.++++++||++.+++.++..+
T Consensus 94 ~~~~~~~~lG~~~i~l~~~~~~ 115 (138)
T 3n5a_A 94 DKLSRNDVIGKIYLSWKSGPGE 115 (138)
T ss_dssp CSSSCCEEEEEEEESSSSCHHH
T ss_pred CCCCCCcEEEEEEEccccCChH
Confidence 9998999999999999986544
No 33
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=1.2e-20 Score=128.54 Aligned_cols=91 Identities=24% Similarity=0.228 Sum_probs=78.5
Q ss_pred ccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEECC-----E-EeeeeeeCCCCCeEecEEEEEEeCC---CCcEEEEEEeC
Q 031204 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGK-----Q-LKTRVVKNNVNPEWNEDLTLSISDS---NLPIKLTVYDK 73 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~-----~-~~T~~~~~t~~P~w~e~~~f~~~~~---~~~l~i~v~d~ 73 (164)
..+.|.|+|++|++|+.++ .+ +||||++++.+ . ++|++++++.||.|||+|.|.+... ...|.|+|||+
T Consensus 22 ~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 100 (142)
T 2dmg_A 22 QRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNS 100 (142)
T ss_dssp TTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEEC
Confidence 4678999999999999988 77 99999999943 3 8999999999999999999998532 35799999999
Q ss_pred CCCCC--CceeEEEEEechhhhhh
Q 031204 74 DTFSL--DDKMGDAEFYITPFLEA 95 (164)
Q Consensus 74 ~~~~~--~~~lG~~~v~l~~l~~~ 95 (164)
+.+++ +++||++.+++.++...
T Consensus 101 d~~~~~~~~~iG~~~i~l~~~~~~ 124 (142)
T 2dmg_A 101 GGFLSKDKGLLGKVLVALASEELA 124 (142)
T ss_dssp CCSSCCSCCCCEEEEEECCCSTTT
T ss_pred CCccccCCcEEEEEEEeccccccc
Confidence 98763 57999999999887654
No 34
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.83 E-value=1.1e-19 Score=147.37 Aligned_cols=86 Identities=28% Similarity=0.397 Sum_probs=79.5
Q ss_pred ccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEECCE-EeeeeeeCCCCCeEecEEEEEEeC--CCCcEEEEEEeCCCCCCC
Q 031204 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMGKQ-LKTRVVKNNVNPEWNEDLTLSISD--SNLPIKLTVYDKDTFSLD 79 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~~-~~T~~~~~t~~P~w~e~~~f~~~~--~~~~l~i~v~d~~~~~~~ 79 (164)
..|.|.|+|++|++|+. + ++++||||++.++++ ++|++++++.||.|||+|.|.+.. ..+.|.|+|||+|..+.|
T Consensus 392 ~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~d 470 (540)
T 3nsj_A 392 GLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDD 470 (540)
T ss_dssp TEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCC
T ss_pred cccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCC
Confidence 47899999999999998 8 889999999999999 999999999999999999998642 567799999999999899
Q ss_pred ceeEEEEEech
Q 031204 80 DKMGDAEFYIT 90 (164)
Q Consensus 80 ~~lG~~~v~l~ 90 (164)
|+||++.++|.
T Consensus 471 D~LG~~~~~L~ 481 (540)
T 3nsj_A 471 DLLGSCDRSPH 481 (540)
T ss_dssp EEEEEEEECCC
T ss_pred CEEEEEEEEee
Confidence 99999999985
No 35
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=1.1e-20 Score=129.52 Aligned_cols=92 Identities=26% Similarity=0.297 Sum_probs=79.8
Q ss_pred ccEEEEEEEEEeEcCCCC-C-------CCCCCcEEEEEECC---E-EeeeeeeCCCCCeEecEEEEEEeCC---CCcEEE
Q 031204 4 LMGLLRVHVLRGVNLAVR-D-------VVSSDPYVVIKMGK---Q-LKTRVVKNNVNPEWNEDLTLSISDS---NLPIKL 68 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~-~-------~~~~dpyv~v~~~~---~-~~T~~~~~t~~P~w~e~~~f~~~~~---~~~l~i 68 (164)
..+.|.|+|++|++|+.. + .+.+||||++.+.+ . ++|++++++.||.|||+|.|.+... ...|.|
T Consensus 24 ~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~ 103 (147)
T 2enp_A 24 LHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLL 103 (147)
T ss_dssp TTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEE
T ss_pred CCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEE
Confidence 467899999999999984 3 35899999999973 3 9999999999999999999998642 357999
Q ss_pred EEEeCCCCCCCceeEEEEEechhhhhh
Q 031204 69 TVYDKDTFSLDDKMGDAEFYITPFLEA 95 (164)
Q Consensus 69 ~v~d~~~~~~~~~lG~~~v~l~~l~~~ 95 (164)
+|||++.++++++||++.+++.++...
T Consensus 104 ~V~d~d~~~~~~~iG~~~i~l~~l~~~ 130 (147)
T 2enp_A 104 TVVDFDKFSRHCVIGKVSVPLCEVDLV 130 (147)
T ss_dssp EEECCSTTCCSCCCEEEEEETTTSCTT
T ss_pred EEEECCCCcCCcEEEEEEEechhcCCC
Confidence 999999998999999999999988654
No 36
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.83 E-value=9.3e-20 Score=125.63 Aligned_cols=88 Identities=28% Similarity=0.338 Sum_probs=74.6
Q ss_pred ccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEEC--CE----EeeeeeeCCCCCeEecEEEEEEeCCC---CcEEEEEEeC
Q 031204 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG--KQ----LKTRVVKNNVNPEWNEDLTLSISDSN---LPIKLTVYDK 73 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~--~~----~~T~~~~~t~~P~w~e~~~f~~~~~~---~~l~i~v~d~ 73 (164)
..+.|.|+|++|++|+..+ .+.+||||++++. +. ++|++++++.||.|||+|.|.+.... ..|.|+|||+
T Consensus 28 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~ 107 (153)
T 1w15_A 28 TTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDS 107 (153)
T ss_dssp TTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeC
Confidence 4678999999999999988 7899999999994 32 79999999999999999999987542 4699999999
Q ss_pred CCCCCCceeEEEEEechh
Q 031204 74 DTFSLDDKMGDAEFYITP 91 (164)
Q Consensus 74 ~~~~~~~~lG~~~v~l~~ 91 (164)
+.++++++||++.+++.+
T Consensus 108 d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 108 ERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp CTTSCCEEEEEEEESTTC
T ss_pred CCCCCCcEEEEEEECCCC
Confidence 999899999999999987
No 37
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.83 E-value=2.3e-20 Score=125.78 Aligned_cols=87 Identities=22% Similarity=0.388 Sum_probs=74.5
Q ss_pred ccEEEEEEEEEeEcCCCCCCCCCCcEEEEEECCE-Eeeeeee-CCCCCeEecEEEEEEeCCCCcEEEEEEeCCCCCCCce
Q 031204 4 LMGLLRVHVLRGVNLAVRDVVSSDPYVVIKMGKQ-LKTRVVK-NNVNPEWNEDLTLSISDSNLPIKLTVYDKDTFSLDDK 81 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~~~~~dpyv~v~~~~~-~~T~~~~-~t~~P~w~e~~~f~~~~~~~~l~i~v~d~~~~~~~~~ 81 (164)
.++.|.|+|++|++++. .+.+||||++. .+ .+|+++. ++.||.|||+|.|.+......|.|+|||++ +++|++
T Consensus 3 ~~~~L~V~V~~A~~l~~--~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~ 77 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA--QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDTM 77 (131)
T ss_dssp CCEEEEEEEEEEECSSC--GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SSCEEE
T ss_pred cceEEEEEEEEeECCCC--CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CCCCCe
Confidence 46899999999998853 57899999999 34 5665554 699999999999999877777999999999 889999
Q ss_pred eEEEEEechhhhhh
Q 031204 82 MGDAEFYITPFLEA 95 (164)
Q Consensus 82 lG~~~v~l~~l~~~ 95 (164)
||++.+++.++...
T Consensus 78 iG~~~i~l~~l~~~ 91 (131)
T 2cjt_A 78 VGTVWIPLRTIRQS 91 (131)
T ss_dssp EEEEEEEGGGSCBC
T ss_pred EEEEEEEHHHhhhc
Confidence 99999999987653
No 38
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.82 E-value=2.1e-19 Score=136.32 Aligned_cols=90 Identities=30% Similarity=0.473 Sum_probs=78.4
Q ss_pred cccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEEC---CE-EeeeeeeCCCCCeEecEEEEEEeCC---CCcEEEEEEeCC
Q 031204 3 NLMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG---KQ-LKTRVVKNNVNPEWNEDLTLSISDS---NLPIKLTVYDKD 74 (164)
Q Consensus 3 ~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~---~~-~~T~~~~~t~~P~w~e~~~f~~~~~---~~~l~i~v~d~~ 74 (164)
...+.|.|+|++|++|+.++ .+.+||||++++. .+ ++|++++++.||.|||+|.|.+... ...|.|+|||++
T Consensus 17 ~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d 96 (296)
T 1dqv_A 17 YGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFD 96 (296)
T ss_dssp SSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECC
T ss_pred CCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcC
Confidence 35689999999999999998 8899999999993 34 9999999999999999999998533 347999999999
Q ss_pred CCCCCceeEEEEEe-chhh
Q 031204 75 TFSLDDKMGDAEFY-ITPF 92 (164)
Q Consensus 75 ~~~~~~~lG~~~v~-l~~l 92 (164)
.++++++||++.++ +.++
T Consensus 97 ~~~~~~~iG~~~i~~l~~~ 115 (296)
T 1dqv_A 97 RFSRHDLIGQVVLDNLLEL 115 (296)
T ss_dssp SSSCCCEEEEEECCCTTGG
T ss_pred CCCCCceEEEEEecccccc
Confidence 99999999999985 4333
No 39
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.80 E-value=7.1e-19 Score=123.05 Aligned_cols=88 Identities=19% Similarity=0.374 Sum_probs=75.7
Q ss_pred cccEEEEEEEEEeEcCCCCCCCCCCcEEEEEECCE-Eeeeeee-CCCCCeEecEEEEEEeCCCCcEEEEEEeCCCCCCCc
Q 031204 3 NLMGLLRVHVLRGVNLAVRDVVSSDPYVVIKMGKQ-LKTRVVK-NNVNPEWNEDLTLSISDSNLPIKLTVYDKDTFSLDD 80 (164)
Q Consensus 3 ~~~g~L~v~v~~a~~L~~~~~~~~dpyv~v~~~~~-~~T~~~~-~t~~P~w~e~~~f~~~~~~~~l~i~v~d~~~~~~~~ 80 (164)
+.++.|.|+|++|++++ ..+.+||||++. .+ .+|+++. ++.||.|||+|.|.+......|.|+|||++ +++|+
T Consensus 11 g~~~~L~V~V~~A~~l~--~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd 85 (167)
T 2cjs_A 11 GILSLLCVGVKKAKFDG--AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDT 85 (167)
T ss_dssp SCCCEEEEEEEEEECSS--CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SSCCE
T ss_pred CceEEEEEEEEEEECCC--CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CCCCc
Confidence 35789999999999884 257899999999 34 6676665 599999999999999877778999999999 88999
Q ss_pred eeEEEEEechhhhhh
Q 031204 81 KMGDAEFYITPFLEA 95 (164)
Q Consensus 81 ~lG~~~v~l~~l~~~ 95 (164)
+||++.++|.++...
T Consensus 86 ~iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 86 MVGTVWIPLRTIRQS 100 (167)
T ss_dssp EEEEEEEEGGGSCBC
T ss_pred eEEEEEEEHHHhccc
Confidence 999999999988653
No 40
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.80 E-value=4e-18 Score=114.65 Aligned_cols=89 Identities=15% Similarity=0.245 Sum_probs=79.9
Q ss_pred EEEEEEEEEeEcCCCCCCCCCCcEEEEEECCE-Eeeeeee-CCCCCeEecEEEEEEeCC---CCcEEEEEEeCCCCCCCc
Q 031204 6 GLLRVHVLRGVNLAVRDVVSSDPYVVIKMGKQ-LKTRVVK-NNVNPEWNEDLTLSISDS---NLPIKLTVYDKDTFSLDD 80 (164)
Q Consensus 6 g~L~v~v~~a~~L~~~~~~~~dpyv~v~~~~~-~~T~~~~-~t~~P~w~e~~~f~~~~~---~~~l~i~v~d~~~~~~~~ 80 (164)
--|+|.|.+|.+|+ +++|||+++.+-+. ++|+++. ++.||.|||.|.|++..+ ++.|.|.|+|++.++++.
T Consensus 21 msL~V~l~~a~~Lp----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~nr 96 (144)
T 3l9b_A 21 MALIVHLKTVSELR----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFSNK 96 (144)
T ss_dssp EEEEEEEEEEESCC----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSCCE
T ss_pred EEEEEEEEEecCCC----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccCCC
Confidence 35899999999998 57899999999888 9999998 699999999999999643 467999999999999999
Q ss_pred eeEEEEEechhhhhhhcc
Q 031204 81 KMGDAEFYITPFLEALKM 98 (164)
Q Consensus 81 ~lG~~~v~l~~l~~~~~~ 98 (164)
+||++.++|.++..+...
T Consensus 97 lIG~~~i~Lq~lv~~~~l 114 (144)
T 3l9b_A 97 LIGTFRMVLQKVVEENRV 114 (144)
T ss_dssp EEEEEEEESHHHHHHSEE
T ss_pred EEEEEEEEhHHhccCCeE
Confidence 999999999999987643
No 41
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.75 E-value=2.8e-17 Score=135.65 Aligned_cols=92 Identities=23% Similarity=0.401 Sum_probs=81.8
Q ss_pred ccEEEEEEEEEeEcCCCCC---CCCCCcEEEEEECC-----E-EeeeeeeCC-CCCeEecEEEEEEeCCC-CcEEEEEEe
Q 031204 4 LMGLLRVHVLRGVNLAVRD---VVSSDPYVVIKMGK-----Q-LKTRVVKNN-VNPEWNEDLTLSISDSN-LPIKLTVYD 72 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~---~~~~dpyv~v~~~~-----~-~~T~~~~~t-~~P~w~e~~~f~~~~~~-~~l~i~v~d 72 (164)
..+.|+|+|++|++|+..+ .+.+||||++.+.+ . ++|++++++ .||.|||+|.|.+..+. ..|.|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 4689999999999999887 57899999999953 4 999999997 99999999999998665 469999999
Q ss_pred CCCCCCCceeEEEEEechhhhhh
Q 031204 73 KDTFSLDDKMGDAEFYITPFLEA 95 (164)
Q Consensus 73 ~~~~~~~~~lG~~~v~l~~l~~~ 95 (164)
++.++++++||++.+++..+..+
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G 597 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQG 597 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCE
T ss_pred cCCCCCCceeEEEEEEHHHcCCC
Confidence 99999999999999999887653
No 42
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.74 E-value=1e-17 Score=125.96 Aligned_cols=91 Identities=30% Similarity=0.375 Sum_probs=80.0
Q ss_pred ccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEEC--C---E-EeeeeeeCCCCCeEecEEEEEEeCCC---CcEEEEEEeC
Q 031204 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG--K---Q-LKTRVVKNNVNPEWNEDLTLSISDSN---LPIKLTVYDK 73 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~--~---~-~~T~~~~~t~~P~w~e~~~f~~~~~~---~~l~i~v~d~ 73 (164)
..+.|.|.|++|++|+..+ .+.+||||++.+. + . ++|++++++.||.|||+|.|.+.... ..|.|+|||+
T Consensus 148 ~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 227 (284)
T 2r83_A 148 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDY 227 (284)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEEC
T ss_pred cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeC
Confidence 3578999999999999988 7899999999984 2 2 89999999999999999999997542 3599999999
Q ss_pred CCCCCCceeEEEEEechhhhh
Q 031204 74 DTFSLDDKMGDAEFYITPFLE 94 (164)
Q Consensus 74 ~~~~~~~~lG~~~v~l~~l~~ 94 (164)
+.++++++||++.+++..+..
T Consensus 228 d~~~~~~~iG~~~i~l~~~~~ 248 (284)
T 2r83_A 228 DKIGKNDAIGKVFVGYNSTGA 248 (284)
T ss_dssp CSSSCCCEEEEEEEETTCCHH
T ss_pred CCCCCCcEEEEEEECCCCCCc
Confidence 999999999999999987644
No 43
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.74 E-value=8.1e-18 Score=140.45 Aligned_cols=93 Identities=25% Similarity=0.464 Sum_probs=83.5
Q ss_pred cccEEEEEEEEEeEcCCC---CC-CCCCCcEEEEEECC---E-EeeeeeeCCCCCeEecEEEEEEeCC-CCcEEEEEEeC
Q 031204 3 NLMGLLRVHVLRGVNLAV---RD-VVSSDPYVVIKMGK---Q-LKTRVVKNNVNPEWNEDLTLSISDS-NLPIKLTVYDK 73 (164)
Q Consensus 3 ~~~g~L~v~v~~a~~L~~---~~-~~~~dpyv~v~~~~---~-~~T~~~~~t~~P~w~e~~~f~~~~~-~~~l~i~v~d~ 73 (164)
.+.|.|.|+|++|++|+. ++ .+.+||||++.+.+ . ++|++++++.||+|||+|.|.+..+ ...|.|+|||+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 367999999999999998 66 78999999999984 4 9999999999999999999999864 46799999999
Q ss_pred CCCCCCceeEEEEEechhhhhhh
Q 031204 74 DTFSLDDKMGDAEFYITPFLEAL 96 (164)
Q Consensus 74 ~~~~~~~~lG~~~v~l~~l~~~~ 96 (164)
+.++ |++||++.+++.++..+.
T Consensus 95 D~~~-ddfIG~v~I~L~~L~~g~ 116 (749)
T 1cjy_A 95 NYVM-DETLGTATFTVSSMKVGE 116 (749)
T ss_dssp CSSS-CEEEEEECCBSTTSCTTC
T ss_pred CCCC-CceeEEEEEEHHHcCCCC
Confidence 9998 999999999999886544
No 44
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.70 E-value=1.2e-18 Score=140.14 Aligned_cols=89 Identities=11% Similarity=0.198 Sum_probs=9.5
Q ss_pred ccEEEEEEEEEeEcCCCCCCCCCCcEEEEEECCE--EeeeeeeCC---CCCeEecEEEEEEeCCCCcEEEEEEeC-C---
Q 031204 4 LMGLLRVHVLRGVNLAVRDVVSSDPYVVIKMGKQ--LKTRVVKNN---VNPEWNEDLTLSISDSNLPIKLTVYDK-D--- 74 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~~~~~dpyv~v~~~~~--~~T~~~~~t---~~P~w~e~~~f~~~~~~~~l~i~v~d~-~--- 74 (164)
..|.|+|+|++|++|++++ ||||++.+++. .||++++++ .||.|||+|.|.+......|.|+|||. +
T Consensus 9 ~~~~L~V~VieAk~L~~~d----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~~~ 84 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDKKR 84 (483)
T ss_dssp EEECC-------------------------------------------------CCEECC--------------------
T ss_pred eccEEEEEEEEcCCcCCCC----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCccc
Confidence 4678999999999998765 99999999876 899999999 999999999999754556799999994 4
Q ss_pred CCCCCceeEEEEEechhhhhhh
Q 031204 75 TFSLDDKMGDAEFYITPFLEAL 96 (164)
Q Consensus 75 ~~~~~~~lG~~~v~l~~l~~~~ 96 (164)
..+++++||.+.+++.++..+.
T Consensus 85 ~~~~d~~lG~v~i~l~~l~~~~ 106 (483)
T 3bxj_A 85 KKDKAGYVGLVTVPVATLAGRH 106 (483)
T ss_dssp ----------------------
T ss_pred cCCCCceEEEEEEEHHHhcCCC
Confidence 3668999999999999887643
No 45
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.66 E-value=4.6e-17 Score=123.38 Aligned_cols=91 Identities=29% Similarity=0.414 Sum_probs=80.7
Q ss_pred ccEEEEEEEEEeEcCCCCC-CCCCCcEEEEEEC--C---E-EeeeeeeCCCCCeEecEEEEEEeCC---CCcEEEEEEeC
Q 031204 4 LMGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG--K---Q-LKTRVVKNNVNPEWNEDLTLSISDS---NLPIKLTVYDK 73 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~--~---~-~~T~~~~~t~~P~w~e~~~f~~~~~---~~~l~i~v~d~ 73 (164)
..|.|.|+|++|++|+.++ .+.+||||++++. + . ++|++++++.||.|||+|.|.+... ...|.|+|||+
T Consensus 150 ~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 229 (296)
T 1dqv_A 150 TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDY 229 (296)
T ss_dssp TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEEC
T ss_pred ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeC
Confidence 3588999999999999988 7889999999996 2 3 8999999999999999999998654 34699999999
Q ss_pred CCCCCCceeEEEEEechhhhh
Q 031204 74 DTFSLDDKMGDAEFYITPFLE 94 (164)
Q Consensus 74 ~~~~~~~~lG~~~v~l~~l~~ 94 (164)
+.++++++||.+.+++..+..
T Consensus 230 d~~~~~~~iG~~~i~l~~~~~ 250 (296)
T 1dqv_A 230 DCIGHNEVIGVCRVGPEAADP 250 (296)
T ss_dssp CSSSCCEEEEECCCSSCTTCH
T ss_pred CCCCCCceEEEEEECCccCCc
Confidence 999999999999999988744
No 46
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.59 E-value=4.7e-15 Score=123.63 Aligned_cols=91 Identities=34% Similarity=0.505 Sum_probs=81.4
Q ss_pred cEEEEEEEEEeEcCCCCC-CCCCCcEEEEEEC-----CE-EeeeeeeCCCCCeEecEEEEEEeCC--CCcEEEEEEeCCC
Q 031204 5 MGLLRVHVLRGVNLAVRD-VVSSDPYVVIKMG-----KQ-LKTRVVKNNVNPEWNEDLTLSISDS--NLPIKLTVYDKDT 75 (164)
Q Consensus 5 ~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~-----~~-~~T~~~~~t~~P~w~e~~~f~~~~~--~~~l~i~v~d~~~ 75 (164)
.+.|.|+|.+|++|++++ .+.+|||+++.+. .. ++|++++++.||.|||+|.|.+... ...|.|+|||++.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 467899999999999999 8899999999983 23 9999999999999999999998643 3559999999999
Q ss_pred CCCCceeEEEEEechhhhhh
Q 031204 76 FSLDDKMGDAEFYITPFLEA 95 (164)
Q Consensus 76 ~~~~~~lG~~~v~l~~l~~~ 95 (164)
.+++++||.+.+++.++...
T Consensus 251 ~~~dd~iG~~~i~l~~l~~~ 270 (674)
T 3pfq_A 251 TSRNDFMGSLSFGISELQKA 270 (674)
T ss_dssp SSCCEECCBCCCBTTHHHHC
T ss_pred ccccccccccccchhhhccC
Confidence 99999999999999998764
No 47
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.51 E-value=9.9e-13 Score=86.05 Aligned_cols=113 Identities=18% Similarity=0.314 Sum_probs=86.7
Q ss_pred ccEEEEEEEEEeEc--CCCCCCCCCCcEEEEEECCE-----Eee-eeeeCCCCCeEecEEEEEEeCCCCcEEEEEEeCCC
Q 031204 4 LMGLLRVHVLRGVN--LAVRDVVSSDPYVVIKMGKQ-----LKT-RVVKNNVNPEWNEDLTLSISDSNLPIKLTVYDKDT 75 (164)
Q Consensus 4 ~~g~L~v~v~~a~~--L~~~~~~~~dpyv~v~~~~~-----~~T-~~~~~t~~P~w~e~~~f~~~~~~~~l~i~v~d~~~ 75 (164)
+...|+|.+.++.- |++. ....||||.+.+... .+| ...++|..|.||++|.-.+. .++.|.|.|++...
T Consensus 4 m~~flRi~~~~~~~~~~~~~-~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~-~Gr~l~i~Vfh~a~ 81 (126)
T 1yrk_A 4 MAPFLRIAFNSYELGSLQAE-DEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIY-EGRVIQIVLMRAAE 81 (126)
T ss_dssp CCCEEEEEEEEEECSSCCCS-SSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECC-TTCEEEEEEEEETT
T ss_pred cCccEEeeeccccccccCCc-cccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeee-CCEEEEEEEEcCCC
Confidence 45678888876653 2221 236899999999854 366 66667999999999999987 56779999997654
Q ss_pred CCCCceeEEEEEechhhhhhhcccccCCCCceEEEEeccCCCccccccceeEeeCCeEEEEEeEEecccceeeEEEEEEE
Q 031204 76 FSLDDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLRNVEVGEVKIQLEW 155 (164)
Q Consensus 76 ~~~~~~lG~~~v~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~G~l~l~l~~ 155 (164)
+|++.+++++.++...... .+| ..+.|+.|+ ++|+|++.++|
T Consensus 82 ----~fvAn~tV~~edL~~~c~~------------------------------~~g--~~e~WvdLe--P~Gkl~~~i~~ 123 (126)
T 1yrk_A 82 ----EPVSEVTVGVSVLAERCKK------------------------------NNG--KAEFWLDLQ--PQAKVLMSVQY 123 (126)
T ss_dssp ----EEEEEEEEEHHHHHHHHHT------------------------------TTT--EEEEEEECB--SSCEEEEEEEE
T ss_pred ----CeeeEEEEEHHHHHhhhcc------------------------------CCC--ceEEEEecc--cCcEEEEEEEE
Confidence 8999999999999975321 012 239999998 89999999998
Q ss_pred E
Q 031204 156 I 156 (164)
Q Consensus 156 ~ 156 (164)
+
T Consensus 124 ~ 124 (126)
T 1yrk_A 124 F 124 (126)
T ss_dssp E
T ss_pred e
Confidence 6
No 48
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=99.47 E-value=1.3e-12 Score=86.55 Aligned_cols=116 Identities=14% Similarity=0.269 Sum_probs=88.3
Q ss_pred cccEEEEEEEEEeEcCCCC--CCCCCCcEEEEEECCE-----Eee-eeeeCCCCCeEecEEEEEEeCCCCcEEEEEEeCC
Q 031204 3 NLMGLLRVHVLRGVNLAVR--DVVSSDPYVVIKMGKQ-----LKT-RVVKNNVNPEWNEDLTLSISDSNLPIKLTVYDKD 74 (164)
Q Consensus 3 ~~~g~L~v~v~~a~~L~~~--~~~~~dpyv~v~~~~~-----~~T-~~~~~t~~P~w~e~~~f~~~~~~~~l~i~v~d~~ 74 (164)
++.+.|+|.+.++.--+-+ .....||||.+.+... .+| ...++|..|.||++|.-.+. .++.|.|.|++..
T Consensus 7 ~m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~-~Gr~l~i~Vfh~a 85 (138)
T 2enj_A 7 GMSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHIN-KGRVMQIIVKGKN 85 (138)
T ss_dssp SCCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCC-SSCEEEEEEECSS
T ss_pred ccCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEE-CCeEEEEEEEcCC
Confidence 3556788888776643322 2346899999999754 677 66667999999999999886 5677999999655
Q ss_pred CCCCCceeEEEEEechhhhhhhcccccCCCCceEEEEeccCCCccccccceeEeeCCeEEEEEeEEecccceeeEEEEEE
Q 031204 75 TFSLDDKMGDAEFYITPFLEALKMRLEGLPNGTIVTKIQPSRENCLAEESHIVWTDGKLVQNLFLRLRNVEVGEVKIQLE 154 (164)
Q Consensus 75 ~~~~~~~lG~~~v~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~G~l~l~l~ 154 (164)
. +|++.++|++.+|...... .+| ..+.|+.|+ +.|+|++.++
T Consensus 86 ~----~fVAn~tV~~edL~~~ck~------------------------------~~g--~~e~WvdLe--P~Gkl~v~i~ 127 (138)
T 2enj_A 86 V----DLISETTVELYSLAERCRK------------------------------NNG--KTEIWLELK--PQGRMLMNAR 127 (138)
T ss_dssp C----SCCEEEEEESHHHHHHHHH------------------------------TTT--CEEEEEECB--SSCEEEEEEE
T ss_pred C----CeeeEEEEEHHHHHhhhcc------------------------------CCC--ceEEEEecc--cCcEEEEEEE
Confidence 4 8999999999999975211 012 239999998 8999999999
Q ss_pred EEe
Q 031204 155 WID 157 (164)
Q Consensus 155 ~~~ 157 (164)
|.-
T Consensus 128 ~~~ 130 (138)
T 2enj_A 128 YFL 130 (138)
T ss_dssp ECC
T ss_pred EEE
Confidence 963
No 49
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.45 E-value=5.2e-13 Score=113.31 Aligned_cols=83 Identities=20% Similarity=0.415 Sum_probs=70.4
Q ss_pred EEEEEEEEEeEcCCCCCCCCCCcEEEEEECC------E-EeeeeeeC-CCCCeEec-EEEEE-EeCCC-CcEEEEEEeCC
Q 031204 6 GLLRVHVLRGVNLAVRDVVSSDPYVVIKMGK------Q-LKTRVVKN-NVNPEWNE-DLTLS-ISDSN-LPIKLTVYDKD 74 (164)
Q Consensus 6 g~L~v~v~~a~~L~~~~~~~~dpyv~v~~~~------~-~~T~~~~~-t~~P~w~e-~~~f~-~~~~~-~~l~i~v~d~~ 74 (164)
..|.|+|++|++|+.. .+||||++.+.+ . ++|+++.+ +.||+||| +|.|. +..+. ..|.|+|||++
T Consensus 725 ~~L~V~Visaq~L~~~---~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d 801 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR---KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG 801 (885)
T ss_dssp EEEEEEEEEEESCCSS---CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT
T ss_pred eEEEEEEEEeccCccc---CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC
Confidence 4799999999999853 689999999864 2 78999976 69999999 69998 65554 45999999987
Q ss_pred CCCCCceeEEEEEechhhhhh
Q 031204 75 TFSLDDKMGDAEFYITPFLEA 95 (164)
Q Consensus 75 ~~~~~~~lG~~~v~l~~l~~~ 95 (164)
+++||++.++|..+..+
T Consensus 802 ----ddfiG~~~lpL~~L~~G 818 (885)
T 3ohm_B 802 ----GKFVGHRILPVSAIRSG 818 (885)
T ss_dssp ----TEEEEEEEEETTTCCCE
T ss_pred ----ccEEeeEEEEHHHcCCC
Confidence 79999999999887664
No 50
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.44 E-value=1.5e-12 Score=110.03 Aligned_cols=85 Identities=19% Similarity=0.359 Sum_probs=71.1
Q ss_pred ccEEEEEEEEEeEcCCCCCCCCCCcEEEEEECC------E-Eeee-eeeC-CCCCeEec-EEEE-EEeCCC-CcEEEEEE
Q 031204 4 LMGLLRVHVLRGVNLAVRDVVSSDPYVVIKMGK------Q-LKTR-VVKN-NVNPEWNE-DLTL-SISDSN-LPIKLTVY 71 (164)
Q Consensus 4 ~~g~L~v~v~~a~~L~~~~~~~~dpyv~v~~~~------~-~~T~-~~~~-t~~P~w~e-~~~f-~~~~~~-~~l~i~v~ 71 (164)
..|.|.|+|++|++|+. +.+||||++.+.+ . ++|+ ++++ +.||+||| +|.| .+..++ ..|.|.||
T Consensus 676 ~~~~L~V~Visa~~L~~---~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~ 752 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE---RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVM 752 (799)
T ss_dssp TCEEEEEEEEEEESCCS---SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEE
T ss_pred eeeeEEEEEEeccccCc---cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEE
Confidence 36799999999999985 4789999999843 3 7899 7765 69999999 6999 786554 35999999
Q ss_pred eCCCCCCCceeEEEEEechhhhhh
Q 031204 72 DKDTFSLDDKMGDAEFYITPFLEA 95 (164)
Q Consensus 72 d~~~~~~~~~lG~~~v~l~~l~~~ 95 (164)
|++ +++||++.+++..+..+
T Consensus 753 D~d----~d~iG~~~ipl~~L~~G 772 (799)
T 2zkm_X 753 EEG----NKFLGHRIIPINALNSG 772 (799)
T ss_dssp ETT----TEEEEEEEEEGGGBCCE
T ss_pred EeC----CCccceEeeehhhcCCC
Confidence 986 78999999999887653
No 51
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.43 E-value=2e-12 Score=109.16 Aligned_cols=84 Identities=14% Similarity=0.370 Sum_probs=71.8
Q ss_pred cEEEEEEEEEeEcCCCCCCCCCCcEEEEEECC-------E-EeeeeeeC-CCCCeEecE-EEEE-EeCCC-CcEEEEEEe
Q 031204 5 MGLLRVHVLRGVNLAVRDVVSSDPYVVIKMGK-------Q-LKTRVVKN-NVNPEWNED-LTLS-ISDSN-LPIKLTVYD 72 (164)
Q Consensus 5 ~g~L~v~v~~a~~L~~~~~~~~dpyv~v~~~~-------~-~~T~~~~~-t~~P~w~e~-~~f~-~~~~~-~~l~i~v~d 72 (164)
.+.|+|+|++|++|+.. .+||||++.+.+ . ++|+++.+ +.||+|||+ |.|. +..++ ..|.|+|||
T Consensus 649 ~~~L~V~Visaq~L~~~---~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D 725 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK---QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSE 725 (816)
T ss_dssp CEEEEEEEEEEECCCSS---CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC---CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEe
Confidence 47899999999999853 689999999864 4 79999886 699999998 9998 76555 459999999
Q ss_pred CCCCCCCceeEEEEEechhhhhh
Q 031204 73 KDTFSLDDKMGDAEFYITPFLEA 95 (164)
Q Consensus 73 ~~~~~~~~~lG~~~v~l~~l~~~ 95 (164)
++ +++||++.++|..+..+
T Consensus 726 ~d----ddfiG~~~ipL~~L~~G 744 (816)
T 3qr0_A 726 EN----GKFIGHRVMPLDGIKPG 744 (816)
T ss_dssp TT----SCEEEEEEEESTTCCCE
T ss_pred cC----CCeeeEEEEEHHHcCCc
Confidence 85 78999999999887764
No 52
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=95.65 E-value=0.12 Score=44.78 Aligned_cols=87 Identities=14% Similarity=0.216 Sum_probs=59.3
Q ss_pred cEEEEEEEEEeEcCCCCCCCCCCcEEEEEE--CCE-----EeeeeeeCCCCCeEecEEEEEEeC---C-CCcEEEEEEeC
Q 031204 5 MGLLRVHVLRGVNLAVRDVVSSDPYVVIKM--GKQ-----LKTRVVKNNVNPEWNEDLTLSISD---S-NLPIKLTVYDK 73 (164)
Q Consensus 5 ~g~L~v~v~~a~~L~~~~~~~~dpyv~v~~--~~~-----~~T~~~~~t~~P~w~e~~~f~~~~---~-~~~l~i~v~d~ 73 (164)
...+.|+|.++.++... ...+-|+.+.+ ++. ..|..+.-..+|.|||.+.|++.- | +..|.|+||+.
T Consensus 216 ~~~f~i~i~~~~~~~~~--~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 293 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD--ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYAV 293 (940)
T ss_dssp CSEEEEEEEEEECCCC-----CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred CCceEEEEEEecccCCC--CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEEe
Confidence 45689999999998653 24566777654 443 556555557789999999999852 3 45699999995
Q ss_pred CCC--C----------CCceeEEEEEechhhh
Q 031204 74 DTF--S----------LDDKMGDAEFYITPFL 93 (164)
Q Consensus 74 ~~~--~----------~~~~lG~~~v~l~~l~ 93 (164)
... + .+..+|.+.+++-+-.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 294 VEKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp C----------------CEEEEEEEEESBCTT
T ss_pred cCCccCccccccccccccceEEEEeeeEECCc
Confidence 321 1 2458999999886643
No 53
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=95.42 E-value=0.18 Score=44.25 Aligned_cols=88 Identities=19% Similarity=0.230 Sum_probs=58.5
Q ss_pred cEEEEEEEEEeEcCCCCCCCCCCcEEEEEE--CCE-----EeeeeeeCCCCCeEecEEEEEEe----CCCCcEEEEEEeC
Q 031204 5 MGLLRVHVLRGVNLAVRDVVSSDPYVVIKM--GKQ-----LKTRVVKNNVNPEWNEDLTLSIS----DSNLPIKLTVYDK 73 (164)
Q Consensus 5 ~g~L~v~v~~a~~L~~~~~~~~dpyv~v~~--~~~-----~~T~~~~~t~~P~w~e~~~f~~~----~~~~~l~i~v~d~ 73 (164)
...+.|+|..+.++........+-||.+.+ +++ .+|+.+. ..+|.|||.+.|++. ..+..|.|+||+.
T Consensus 354 ~~~f~v~i~~~~~~n~~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~ 432 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICSV 432 (1091)
T ss_dssp CSEEEEEEEEESCCCCCCSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECCC
T ss_pred CCCEEEEEEEecCCCCCccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEEe
Confidence 356899999998875433334567887776 333 3444333 457889999999985 2345699999986
Q ss_pred CCC----CCCceeEEEEEechhhh
Q 031204 74 DTF----SLDDKMGDAEFYITPFL 93 (164)
Q Consensus 74 ~~~----~~~~~lG~~~v~l~~l~ 93 (164)
... ..+..+|.+.+++-+..
T Consensus 433 ~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 433 KGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCC-------CCEEEEEESBCTT
T ss_pred cCccCcccccceeEEeeeeeEccC
Confidence 542 13458999999987653
No 54
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=94.94 E-value=0.3 Score=42.40 Aligned_cols=88 Identities=15% Similarity=0.095 Sum_probs=55.1
Q ss_pred EEEEEEEEEeEcCCCCCCCCCCcEEEEEE--CCE----EeeeeeeCCCCCeEecEEEEEEeC---C-CCcEEEEEEeCCC
Q 031204 6 GLLRVHVLRGVNLAVRDVVSSDPYVVIKM--GKQ----LKTRVVKNNVNPEWNEDLTLSISD---S-NLPIKLTVYDKDT 75 (164)
Q Consensus 6 g~L~v~v~~a~~L~~~~~~~~dpyv~v~~--~~~----~~T~~~~~t~~P~w~e~~~f~~~~---~-~~~l~i~v~d~~~ 75 (164)
..+.|.|..+...........+-|+.+.+ ++. .+|..+.-+.+|.|||.+.|++.- | +..|.|+||+...
T Consensus 218 ~~f~i~i~~~~~~~~~~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~ 297 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLPRTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGAK 297 (961)
T ss_dssp SEEEEEEEEEECSSCCTTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEEC
T ss_pred CceEEEEeecccccccCCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEeccc
Confidence 45788888876522111234566777544 554 344444446679999999998852 3 4569999997432
Q ss_pred C----------------CCCceeEEEEEechhhh
Q 031204 76 F----------------SLDDKMGDAEFYITPFL 93 (164)
Q Consensus 76 ~----------------~~~~~lG~~~v~l~~l~ 93 (164)
. +.+..+|.+.+++-+..
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 298 PALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp --------------------CEEEEEEEESBCTT
T ss_pred CccccccccccccccccccceeEEEEeeeeecCC
Confidence 1 13458999999886643
No 55
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=94.58 E-value=0.65 Score=31.36 Aligned_cols=91 Identities=16% Similarity=0.184 Sum_probs=63.6
Q ss_pred CcccEEEEEEEEEeEcCCCCC---CCCCCcEEEEEEC--CE--EeeeeeeCCCCCeEecEEEEEEeCC--------CCcE
Q 031204 2 ENLMGLLRVHVLRGVNLAVRD---VVSSDPYVVIKMG--KQ--LKTRVVKNNVNPEWNEDLTLSISDS--------NLPI 66 (164)
Q Consensus 2 ~~~~g~L~v~v~~a~~L~~~~---~~~~dpyv~v~~~--~~--~~T~~~~~t~~P~w~e~~~f~~~~~--------~~~l 66 (164)
+...+.+.|+|.++.- .+.. .+..+|..-+..+ .. +.|.++. +.+|.+|-+-.|.+... ...+
T Consensus 14 ~~gEnlfEihi~~~~~-~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l 91 (156)
T 2yrb_A 14 ERGENLFEIHINKVTF-SSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTI 91 (156)
T ss_dssp CSSCEEEEEEEEEECC-CHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCE
T ss_pred cCCCcEEEEEEeEEEE-cHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCE
Confidence 3456788899988763 2111 2345665555554 33 7777666 77999999999988532 2468
Q ss_pred EEEEEeCCCCCCCceeEEEEEechhhhhh
Q 031204 67 KLTVYDKDTFSLDDKMGDAEFYITPFLEA 95 (164)
Q Consensus 67 ~i~v~d~~~~~~~~~lG~~~v~l~~l~~~ 95 (164)
.++++..... ....+|.++|++.++...
T Consensus 92 ~lELhqa~g~-~~~tla~~~I~l~~lLe~ 119 (156)
T 2yrb_A 92 TLEVHQAYST-EYETIAACQLKFHEILEK 119 (156)
T ss_dssp EEEEEEECSS-CEEEEEEEEECCSHHHHC
T ss_pred EEEEEEeeCC-CceEEEEEEEEhHHhhCc
Confidence 8999887533 556999999999999865
No 56
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=93.30 E-value=1.6 Score=31.23 Aligned_cols=53 Identities=13% Similarity=0.207 Sum_probs=40.6
Q ss_pred EeeeeeeCCCCCeEecEEEEEEeCC---CCcEEEEEEeCCCCC----CCceeEEEEEech
Q 031204 38 LKTRVVKNNVNPEWNEDLTLSISDS---NLPIKLTVYDKDTFS----LDDKMGDAEFYIT 90 (164)
Q Consensus 38 ~~T~~~~~t~~P~w~e~~~f~~~~~---~~~l~i~v~d~~~~~----~~~~lG~~~v~l~ 90 (164)
++|.+.....+|.|+|++.+.+... ..-|.|++++...-. ....+|-+.++|-
T Consensus 79 ~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 79 YKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLM 138 (220)
T ss_dssp EECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESB
T ss_pred EEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcc
Confidence 8888888889999999999999643 234899998765321 2347899999884
No 57
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=92.37 E-value=0.21 Score=43.88 Aligned_cols=86 Identities=14% Similarity=0.226 Sum_probs=54.9
Q ss_pred cEEEEEEEEEeEcCCCCCCCCCCcEEE--EEECCE-----EeeeeeeCCCCCeEecEEEEEEeC---C-CCcEEEEEEeC
Q 031204 5 MGLLRVHVLRGVNLAVRDVVSSDPYVV--IKMGKQ-----LKTRVVKNNVNPEWNEDLTLSISD---S-NLPIKLTVYDK 73 (164)
Q Consensus 5 ~g~L~v~v~~a~~L~~~~~~~~dpyv~--v~~~~~-----~~T~~~~~t~~P~w~e~~~f~~~~---~-~~~l~i~v~d~ 73 (164)
...+.|+|..+.++...+ ..+-|+. +.-++. .+|..+.-..+|.|||.+.|++.- | +..|.|+||+.
T Consensus 352 ~~~f~i~i~~~~~~~~~~--~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~ 429 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTEE--TVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYAV 429 (1092)
T ss_dssp CSEEEEEECCCCCCCCCS--SCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCCC
T ss_pred CCCEEEEEEEeccCCCCC--CceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEEe
Confidence 356889999988876542 3455655 444554 445554446789999999999852 2 45699999986
Q ss_pred CCC----------------------CCCceeEEEEEechhh
Q 031204 74 DTF----------------------SLDDKMGDAEFYITPF 92 (164)
Q Consensus 74 ~~~----------------------~~~~~lG~~~v~l~~l 92 (164)
... ..+..+|.+.+++-+-
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 470 (1092)
T 2y3a_A 430 LDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDF 470 (1092)
T ss_dssp ------------------------------CCEEEEESBCT
T ss_pred cCccccccccccccccccccccccccccceeEEEeeeeECC
Confidence 311 0123788888887653
Done!