Query 031207
Match_columns 164
No_of_seqs 112 out of 623
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 17:09:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031207.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031207hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2idr_A Eukaryotic translation 100.0 1.8E-49 6E-54 316.3 9.8 120 40-160 1-121 (177)
2 2jgb_A Eukaryotic translation 100.0 7.5E-49 2.6E-53 317.0 11.7 126 36-161 10-137 (195)
3 1l8b_A Eukaryotic translation 100.0 1.2E-47 4.1E-52 308.7 10.6 120 38-161 7-132 (190)
4 1ipb_A Eukaryotic translation 100.0 1.2E-47 4E-52 314.6 9.2 120 38-161 34-159 (217)
5 1ap8_A Translation initiation 100.0 3.3E-47 1.1E-51 311.3 11.6 124 35-160 31-158 (213)
6 3m94_A Translation initiation 100.0 3.2E-47 1.1E-51 306.5 10.4 118 40-161 2-125 (189)
7 3hxi_A Eukaryotic translation 100.0 2E-47 6.9E-52 307.6 8.3 123 35-161 4-131 (189)
8 4axg_A Eukaryotic translation 100.0 5.2E-45 1.8E-49 304.1 11.4 120 37-160 66-189 (248)
9 1ztp_A Basophilic leukemia exp 97.8 1.1E-05 3.8E-10 67.1 3.3 43 113-160 121-164 (251)
10 2k0q_A Putative uncharacterize 54.6 4.9 0.00017 27.2 1.4 16 92-107 11-26 (74)
11 1nrp_R Receptor based peptide 25.8 22 0.00077 18.9 0.8 12 104-115 13-24 (26)
12 1nro_R Receptor based peptide 21.8 27 0.00094 18.7 0.6 11 104-114 13-23 (27)
No 1
>2idr_A Eukaryotic translation initiation factor 4E-1; eukaryotic initiation factor 4E, EIF4E, translation regulator; 1.85A {Triticum aestivum} PDB: 2idv_A* 2wmc_A*
Probab=100.00 E-value=1.8e-49 Score=316.30 Aligned_cols=120 Identities=34% Similarity=0.599 Sum_probs=113.4
Q ss_pred CCCCCCceEEEEEcCCCCCCCccchHhhcceeeeecchhhHHHhhcCCCCCCCCCCCceeEEeeCCCccccccCCCCCCc
Q 031207 40 LHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGG 119 (164)
Q Consensus 40 ~h~L~~~WtfW~~~~~~~~~~~~~y~~~l~~I~tf~TVE~FW~~y~~l~~ps~L~~~~~~~lFK~GI~P~WEDp~N~nGG 119 (164)
.|||+++|||||+.+..+.+ ..+|+++|++|++|+|||+||++|+||++|++|+.+++|||||+||+||||||+|++||
T Consensus 1 ~HpL~~~Wt~W~~~~~~~~~-~~~y~~~l~~i~~f~TVE~FW~~yn~i~~ps~L~~~~~~~lFK~gI~P~WED~~N~~GG 79 (177)
T 2idr_A 1 AHPLENAWTFWFDNPQGKSR-QVAWGSTIHPIHTFSTVEDFWGLYNNIHNPSKLNVGADFHCFKNKIEPKWEDPICANGG 79 (177)
T ss_dssp CCEEEEEEEEEEECTTCSSC-EEETTEEECCEEEEEEHHHHHHHHTTSCCGGGSCTTCEEEEEEGGGCCSTTCCTTTTCE
T ss_pred CCCCCCeEEEEEEcCCCCCc-ccchHhhCeEEEEEcCHHHHHHHHhcCCCHHHCCCCCEEEEEcCCceecccCCCCCCCC
Confidence 49999999999998764333 46899999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEcCCchHHHHHHHHHHHhcCCC-CCCCeeEEEEEeEe
Q 031207 120 KWIIRFKKVVSGRFWEDLVRRRLATAS-PPKHICILQQLSIF 160 (164)
Q Consensus 120 kw~i~~~k~~~d~~We~lll~~IGe~f-~~d~I~Gvvvs~~~ 160 (164)
+|+|+++|..++++|++|||++|||+| .+++|||||+++|.
T Consensus 80 ~w~i~~~k~~~d~~W~~lll~~IGe~f~~~d~IcGvvvsvR~ 121 (177)
T 2idr_A 80 KWTISCGRGKSDTFWLHTLLAMIGEQFDFGDEICGAVVSVRQ 121 (177)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHTTCSTTGGGEEEEEEEECS
T ss_pred EEEEEECcCcHHHHHHHHHHHHhcCcCCCCCceEEEEEEEec
Confidence 999999999999999999999999999 67899999999996
No 2
>2jgb_A Eukaryotic translation initiation factor 4E type 2; phosphorylation, 4EHP, EIF4E, RNA- binding, acetylation, CAP-binding; HET: MGT; 1.7A {Homo sapiens} PDB: 2jgc_A
Probab=100.00 E-value=7.5e-49 Score=316.97 Aligned_cols=126 Identities=47% Similarity=0.891 Sum_probs=116.9
Q ss_pred ccCCCCCCCCceEEEEEcCCCCC-CCccchHhhcceeeeecchhhHHHhhcCCCCCCCCCCCceeEEeeCCCccccccCC
Q 031207 36 LKANLHPLKNKFVFWYTRRTPGV-RTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSA 114 (164)
Q Consensus 36 ~~~~~h~L~~~WtfW~~~~~~~~-~~~~~y~~~l~~I~tf~TVE~FW~~y~~l~~ps~L~~~~~~~lFK~GI~P~WEDp~ 114 (164)
..+..|||+++|||||+...++. ....+|+++|++|++|+|||+||++|+||++|++|+.+++|||||+||+||||||+
T Consensus 10 ~~~~~hpL~~~Wt~W~~~~~~~~~~~~~~y~~~l~~i~tf~TVE~FW~~yn~i~~ps~L~~~~dy~lFK~gI~P~WED~~ 89 (195)
T 2jgb_A 10 PGPAEHPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWRFYSHMVRPGDLTGHSDFHLFKEGIKPMWEDDA 89 (195)
T ss_dssp CCTTCCEEEEEEEEEEEEECTTCCCCHHHHHHHEEEEEEEEEHHHHHHHHTTSCCGGGCCSEEEEEEEETTCCSSTTSTT
T ss_pred CCCCcCccCCeEEEEEEcCCCCCccchhhhhhhceEEEEEecHHHHHHHHhcCCChHHCCCCceEEEEeCCCcccccCCC
Confidence 44678999999999999865432 23468999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEEcCCchHHHHHHHHHHHhcCCC-CCCCeeEEEEEeEee
Q 031207 115 NCNGGKWIIRFKKVVSGRFWEDLVRRRLATAS-PPKHICILQQLSIFH 161 (164)
Q Consensus 115 N~nGGkw~i~~~k~~~d~~We~lll~~IGe~f-~~d~I~Gvvvs~~~~ 161 (164)
|++||||+|+++|..++++|++|||++|||+| .+++|||||+++|..
T Consensus 90 N~~GGkw~i~~~k~~~d~~W~~llLa~IGE~f~~~d~IcGvvvsvR~~ 137 (195)
T 2jgb_A 90 NKNGGKWIIRLRKGLASRCWENLILAMLGEQFMVGEEICGAVVSVRFQ 137 (195)
T ss_dssp TTTCEEEEEEECTTCHHHHHHHHHHHHHTTCSCCTTCEEEEEEEECSS
T ss_pred CCCCcEEEEEeCcccHHHHHHHHHHHHhcCCCCCCCceeeeEEEEecC
Confidence 99999999999999999999999999999999 789999999999974
No 3
>1l8b_A Eukaryotic translation initiation factor 4E; eukaryotic initiation factor 4E, EIF4E, CAP, 7-METHYLGPPPG, RNA binding protein; HET: MGP; 1.80A {Mus musculus} SCOP: d.86.1.1 PDB: 1ej4_A* 1ejh_A* 1ej1_A* 1wkw_A* 3am7_A*
Probab=100.00 E-value=1.2e-47 Score=308.70 Aligned_cols=120 Identities=31% Similarity=0.644 Sum_probs=110.7
Q ss_pred CCCCCCCCceEEEEEcCCCCCCCccchHhhcceeeeecchhhHHHhhcCCCCCCCCCCCceeEEeeCCCccccccCCCCC
Q 031207 38 ANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCN 117 (164)
Q Consensus 38 ~~~h~L~~~WtfW~~~~~~~~~~~~~y~~~l~~I~tf~TVE~FW~~y~~l~~ps~L~~~~~~~lFK~GI~P~WEDp~N~n 117 (164)
...|||+++|||||+.+.. ..+|+++|++|++|+|||+||++|+||++|++|+.+++|||||+||+||||||+|++
T Consensus 7 ~~~hpL~~~Wt~W~~~~~~----~~~y~~~l~~i~tf~TVE~FW~~yn~i~~ps~L~~~~~y~lFK~gI~P~WED~~N~~ 82 (190)
T 1l8b_A 7 YIKHPLQNRWALWFFKNDK----SKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKR 82 (190)
T ss_dssp --CCEEEEEEEEEEEECCS----SSCTGGGEEEEEEEEEHHHHHHHHTTSCCGGGSCTTEEEEEEETTCCSSTTSTTTTT
T ss_pred cccCCCCCeEEEEEEcCCC----ccchhhhceEEEEEecHHHHHHHHHcCCCHHHCCCCCEEEEECCCceecccCCCCCC
Confidence 4679999999999998653 348999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEcCCc----hHHHHHHHHHHHhcCCC--CCCCeeEEEEEeEee
Q 031207 118 GGKWIIRFKKVV----SGRFWEDLVRRRLATAS--PPKHICILQQLSIFH 161 (164)
Q Consensus 118 GGkw~i~~~k~~----~d~~We~lll~~IGe~f--~~d~I~Gvvvs~~~~ 161 (164)
||||+|+++|.. ++++|++|||++|||+| .+++|||||+++|..
T Consensus 83 GG~w~i~~~k~~~~~~~d~~W~~lll~~IGe~f~~~~d~IcGvvvsvR~~ 132 (190)
T 1l8b_A 83 GGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAK 132 (190)
T ss_dssp CEEEEEEEEGGGTTTTHHHHHHHHHHHHHTTTTGGGGGGEEEEEEEECSS
T ss_pred CCEEEEEecCccCcchHHHHHHHHHHHHhhcccccCCCceeeEEEEeecC
Confidence 999999998764 59999999999999999 488999999999974
No 4
>1ipb_A Eukaryotic translation initiation factor 4E; protein biosynthesis, RNA binding protein; HET: GTA; 2.00A {Homo sapiens} SCOP: d.86.1.1 PDB: 1ipc_A* 2gpq_A 2v8w_A* 2v8x_A* 2v8y_A* 2w97_A* 3smu_A 3tf2_A 3u7x_A 4dt6_A* 4dum_A* 2w97_B*
Probab=100.00 E-value=1.2e-47 Score=314.64 Aligned_cols=120 Identities=31% Similarity=0.644 Sum_probs=111.7
Q ss_pred CCCCCCCCceEEEEEcCCCCCCCccchHhhcceeeeecchhhHHHhhcCCCCCCCCCCCceeEEeeCCCccccccCCCCC
Q 031207 38 ANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCN 117 (164)
Q Consensus 38 ~~~h~L~~~WtfW~~~~~~~~~~~~~y~~~l~~I~tf~TVE~FW~~y~~l~~ps~L~~~~~~~lFK~GI~P~WEDp~N~n 117 (164)
...|||+++|||||+.+.. ..+|+++|++|++|+|||+||++|+||++|++|+.+++|||||+||+||||||+|++
T Consensus 34 ~~~hpL~~~Wt~W~~~~~~----~~~y~~~l~~I~tf~TVE~FW~~yn~i~~ps~L~~~~dy~lFK~GI~P~WEDp~N~~ 109 (217)
T 1ipb_A 34 YIKHPLQNRWALWFFKNDK----SKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKR 109 (217)
T ss_dssp TSCCEEEEEEEEEEECCCT----TSCTGGGEEEEEEEEEHHHHHHHHHHSCCGGGSCTTCEEEEEETTCCSSTTSTTTTT
T ss_pred ccCCCCCCeEEEEEEeCCc----ccchhhhceEEEEEccHHHHHHHHHcCCCHHHCCCCCEEEEECCCceecccCCCCCC
Confidence 4579999999999998652 358999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEcCCc----hHHHHHHHHHHHhcCCC--CCCCeeEEEEEeEee
Q 031207 118 GGKWIIRFKKVV----SGRFWEDLVRRRLATAS--PPKHICILQQLSIFH 161 (164)
Q Consensus 118 GGkw~i~~~k~~----~d~~We~lll~~IGe~f--~~d~I~Gvvvs~~~~ 161 (164)
||||+|+++|.. ++++|++|||++|||+| .+++||||||++|..
T Consensus 110 GGkw~i~~~k~~~~~~ld~~W~~llLa~IGE~f~~~~d~IcGvvvsvR~~ 159 (217)
T 1ipb_A 110 GGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAK 159 (217)
T ss_dssp CEEEEEECCTTHHHHTHHHHHHHHHHHHHTTTTGGGGGGEEEEEEECCTT
T ss_pred CCEEEEEeccccCcchHHHHHHHHHHHHhhccccccCCccceEEEEeecC
Confidence 999999999865 49999999999999999 478999999999964
No 5
>1ap8_A Translation initiation factor EIF4E; RNA CAP; HET: M7G; NMR {Saccharomyces cerevisiae} SCOP: d.86.1.1 PDB: 1rf8_A*
Probab=100.00 E-value=3.3e-47 Score=311.26 Aligned_cols=124 Identities=27% Similarity=0.558 Sum_probs=112.3
Q ss_pred cccCCCCCCCCceEEEEEcCCCCCCCccchHhhcceeeeecchhhHHHhhcCCCCCCCCCCCceeEEeeCCCccccccCC
Q 031207 35 ELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSA 114 (164)
Q Consensus 35 ~~~~~~h~L~~~WtfW~~~~~~~~~~~~~y~~~l~~I~tf~TVE~FW~~y~~l~~ps~L~~~~~~~lFK~GI~P~WEDp~ 114 (164)
......|||+++|||||+.+.. ....+|.++|++|++|+|||+||++|+||++|++|+.+++|||||+||+||||||+
T Consensus 31 ~~~~~~hpL~~~Wt~W~~~~~~--~~~~~y~~~l~~I~tf~TVE~FW~~yn~i~~ps~L~~~~dy~lFK~GI~P~WEDp~ 108 (213)
T 1ap8_A 31 AHFDVKHPLNTKWTLWYTKPAV--DKSESWSDLLRPVTSFQTVEEFWAIIQNIPEPHELPLKSDYHVFRNDVRPEWEDEA 108 (213)
T ss_dssp CCCCCSSEEEEEEEEEEECCCG--GGTSCHHHHCEEEEEEEESHHHHHHHHTCCTTTTSCSCCEEEEECSSCCSCTTTTT
T ss_pred CCCCCccccCCcEEEEEEcCCc--ccccchhhhceEEEEEccHHHHHHHHHcCCChHHCCCCCEEEEEcCCceecccCCC
Confidence 3335789999999999998764 22358999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEEc--CCchHHHHHHHHHHHhcCCC-CCC-CeeEEEEEeEe
Q 031207 115 NCNGGKWIIRFK--KVVSGRFWEDLVRRRLATAS-PPK-HICILQQLSIF 160 (164)
Q Consensus 115 N~nGGkw~i~~~--k~~~d~~We~lll~~IGe~f-~~d-~I~Gvvvs~~~ 160 (164)
|++||||+|+++ +..++++|++|||++|||+| ..+ +|||||+++|.
T Consensus 109 N~~GGkw~i~~~~k~~~~d~~W~~llLa~IGE~f~~~~deIcGvvvsvR~ 158 (213)
T 1ap8_A 109 NAKGGKWSFQLRGKGADIDELWLRTLLAVIGETIDEDDSQINGVVLSIRK 158 (213)
T ss_dssp TTTSEEEEEEECSCCSSSHHHHHHHHHHHTSTTTCSSTTTEEEEEEECCT
T ss_pred CCCCCEEEEEECCCcchHHHHHHHHHHHHhcCcccCCCCcEeEEEEEeec
Confidence 999999999984 34899999999999999999 444 89999999996
No 6
>3m94_A Translation initiation factor 4E; EIF4E, berkeley structural genomics center, BSGC; HET: M7M; 2.05A {Ascaris suum} SCOP: d.86.1.0 PDB: 3m93_A*
Probab=100.00 E-value=3.2e-47 Score=306.50 Aligned_cols=118 Identities=32% Similarity=0.662 Sum_probs=110.3
Q ss_pred CCCCCCceEEEEEcCCCCCCCccchHhhcceeeeecchhhHHHhhcCCCCCCCCCCCceeEEeeCCCccccccCCCCCCc
Q 031207 40 LHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGG 119 (164)
Q Consensus 40 ~h~L~~~WtfW~~~~~~~~~~~~~y~~~l~~I~tf~TVE~FW~~y~~l~~ps~L~~~~~~~lFK~GI~P~WEDp~N~nGG 119 (164)
.|||+++|||||+.... ..+|+++|++|++|+|||+||++|+||++|++|+.+++|||||+||+||||||+|++||
T Consensus 2 ~HpL~~~Wt~W~~~~~~----~~~y~~~l~~i~tf~TVE~FW~~yn~i~~ps~L~~~~dy~lFK~gI~P~WED~~N~~GG 77 (189)
T 3m94_A 2 RHPLQCHWALWYLKADR----SKDWEDCLKQVAVFDTVEDFWSLYNHIQAASGLTWGSDYYLFKEGIKPMWEDENNVKGG 77 (189)
T ss_dssp CCEEEEEEEEEEECCCS----SSCGGGGEEEEEEEEEHHHHHHHHTTSCCGGGSCTTCEEEEEETTCCSSTTSTTTTTCE
T ss_pred CCCCCCcEEEEEECCCC----ccChhhhceEEEEEecHHHHHHHhhCCCChhHCCCCCeEEEecCCcccCCCCCCCCCCC
Confidence 69999999999986542 25899999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEcCC----chHHHHHHHHHHHhcCCC--CCCCeeEEEEEeEee
Q 031207 120 KWIIRFKKV----VSGRFWEDLVRRRLATAS--PPKHICILQQLSIFH 161 (164)
Q Consensus 120 kw~i~~~k~----~~d~~We~lll~~IGe~f--~~d~I~Gvvvs~~~~ 161 (164)
+|+|+++|. .++++|++|||++|||+| .+++||||||++|..
T Consensus 78 kw~i~~~k~~~~~~~d~~W~~lll~~IGe~f~~~~~~IcGvvvsvR~~ 125 (189)
T 3m94_A 78 RWLVVVDKQKRAQLLDHYWLELLMAIIGEQFEDNGEYICGAVVNVRQK 125 (189)
T ss_dssp EEEEEECTTTHHHHHHHHHHHHHHHHHTTCSGGGGGGEEEEEEECCSS
T ss_pred EEEEEecCccccchHHHHHHHHHHHHhCCcccccCCcCceEEEEEecC
Confidence 999999875 579999999999999999 589999999999963
No 7
>3hxi_A Eukaryotic translation initiation 4E; protein-mRNA CAP complex, acetylation, phosphoprotein, protein synthesis inhibitor; HET: GTG; 1.80A {Schistosoma mansoni} SCOP: d.86.1.0 PDB: 3hxg_A*
Probab=100.00 E-value=2e-47 Score=307.59 Aligned_cols=123 Identities=26% Similarity=0.529 Sum_probs=112.1
Q ss_pred cccCCCCCCCCceEEEEEcCCCCCCCccchHhhcceeeeecchhhHHHhhcCCCCCCCCCCCceeEEeeCCCccccccCC
Q 031207 35 ELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSA 114 (164)
Q Consensus 35 ~~~~~~h~L~~~WtfW~~~~~~~~~~~~~y~~~l~~I~tf~TVE~FW~~y~~l~~ps~L~~~~~~~lFK~GI~P~WEDp~ 114 (164)
+.+...|||+++|||||+.+.. + .+|+++|++|++|+|||+||++|+||++|++|+.+++|||||+||+||||||+
T Consensus 4 ~~~~~~HpL~~~Wt~W~~~~~~---~-~~~~~~l~~i~~f~TVE~FW~~yn~i~~ps~L~~~~d~~lFK~gI~P~WED~~ 79 (189)
T 3hxi_A 4 GSPEFPHPLQDSWSYYLFQFRK---A-LDWDECLEKVATFSTIEDFWSVLTHTVRPREITYGKDLYMFKSDIMPKWEDPK 79 (189)
T ss_dssp ---CCCCEEEEEEEEEEECCCT---T-CCGGGGEEEEEEEEEHHHHHHHHHTSCCTTTCCTTCEEEEEETTSCSSTTSHH
T ss_pred CCCCccCCCCCeEEEEEECCCC---c-cChhhhceEEEEEeeHHHHHHHHHhCCChHHCCCCceEEEECCCcccCCCCcC
Confidence 4567789999999999997653 2 48999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEEcCC-chHHHHHHHHHHHhcCCC--CCCC--eeEEEEEeEee
Q 031207 115 NCNGGKWIIRFKKV-VSGRFWEDLVRRRLATAS--PPKH--ICILQQLSIFH 161 (164)
Q Consensus 115 N~nGGkw~i~~~k~-~~d~~We~lll~~IGe~f--~~d~--I~Gvvvs~~~~ 161 (164)
|++||||+|+++|. .++++|++|||++|||+| .+++ |||||+++|..
T Consensus 80 N~~GGkw~i~~~k~~~~d~~W~~lll~~IGe~f~~~~~~~~IcGvvvsvR~~ 131 (189)
T 3hxi_A 80 NENGGRWLINVTARQDVDFLWDELLMLLIGSDWDTDEEDRQICGAVFQPRSR 131 (189)
T ss_dssp HHTCEEEEEECCTTSCHHHHHHHHHHHHHTTCCSSHHHHHHEEEEEEECCTT
T ss_pred CCCCcEEEEEecCCCcHHHHHHHHHHHHhcCcccccCCCceeeeEEEEeccC
Confidence 99999999999988 699999999999999999 3566 99999999963
No 8
>4axg_A Eukaryotic translation initiation factor 4E; 4E-BP, mRNA localization, translation; 2.80A {Drosophila melanogaster}
Probab=100.00 E-value=5.2e-45 Score=304.08 Aligned_cols=120 Identities=35% Similarity=0.648 Sum_probs=110.7
Q ss_pred cCCCCCCCCceEEEEEcCCCCCCCccchHhhcceeeeecchhhHHHhhcCCCCCCCCCCCceeEEeeCCCccccccCCCC
Q 031207 37 KANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANC 116 (164)
Q Consensus 37 ~~~~h~L~~~WtfW~~~~~~~~~~~~~y~~~l~~I~tf~TVE~FW~~y~~l~~ps~L~~~~~~~lFK~GI~P~WEDp~N~ 116 (164)
....|||+++|||||+.+.. ..+|.+++++|++|+|||+||++|+||++|++|+.+++|||||+||+||||||+|+
T Consensus 66 ~~~kHpL~~~WtlW~~~~~~----~~~~~~~l~~I~~f~TVE~FW~~yn~i~~ps~l~~~~~~~lFK~gI~P~WED~~N~ 141 (248)
T 4axg_A 66 HLYKHPLMNVWTLWYLENDR----SKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLFKKNIRPMWEDAANK 141 (248)
T ss_dssp CCCCCEEEEEEEEEEESCSC----CCTTBCCEEEEEEEEEHHHHHHHHTTBCCTTSSCTTEEEEEEETTCCSSSSSTTTT
T ss_pred cccCCCCCCeEEEEEeeCCC----ccchHHhCeEEEEEcCHHHHHHHHHcCCCHHHCCCCceEEEEcCCcccCCCCccCC
Confidence 34679999999999997542 24799999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEcCCc---hHHHHHHHHHHHhcCCC-CCCCeeEEEEEeEe
Q 031207 117 NGGKWIIRFKKVV---SGRFWEDLVRRRLATAS-PPKHICILQQLSIF 160 (164)
Q Consensus 117 nGGkw~i~~~k~~---~d~~We~lll~~IGe~f-~~d~I~Gvvvs~~~ 160 (164)
+||+|+|+++|.. ++++|++|||++|||+| .+++|||||+++|.
T Consensus 142 ~GG~w~~~~~k~~~~~~d~~W~~lll~~IGe~~~~~~~I~Gi~is~R~ 189 (248)
T 4axg_A 142 QGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVINIRG 189 (248)
T ss_dssp TCEEEEEEEETCCHHHHHHHHHHHHHHHHTTCSSCGGGEEEEEEEECS
T ss_pred CccEEEEEecccchhHHHHHHHHHHHHHHhCcCCCCCceeceEEEecC
Confidence 9999999998763 58999999999999999 78899999999984
No 9
>1ztp_A Basophilic leukemia expressed protein BLES03; HS.433573, BC010512, structural genomics, Pro structure initiative, PSI, CESG; HET: MSE; 2.50A {Homo sapiens} SCOP: d.86.1.2 PDB: 2q4k_A
Probab=97.79 E-value=1.1e-05 Score=67.11 Aligned_cols=43 Identities=12% Similarity=0.313 Sum_probs=38.9
Q ss_pred CCCCCCceEEEEEcC-CchHHHHHHHHHHHhcCCCCCCCeeEEEEEeEe
Q 031207 113 SANCNGGKWIIRFKK-VVSGRFWEDLVRRRLATASPPKHICILQQLSIF 160 (164)
Q Consensus 113 p~N~nGGkw~i~~~k-~~~d~~We~lll~~IGe~f~~d~I~Gvvvs~~~ 160 (164)
+.|..||||+|.+++ ..+|++|+++++++|+++ |||++|+.|+
T Consensus 121 ~~nv~gGKWLIfl~k~~~VD~iW~~I~~ali~g~-----L~gAKVstr~ 164 (251)
T 1ztp_A 121 THHVLSGKWLMHLAPGFKLDHAWAGIARAVVEGR-----LQVAKVSPRA 164 (251)
T ss_dssp HHTCCCEEEEEEECSSHHHHHHHHHHHHHHHHTS-----CSEEEECCBC
T ss_pred HcCCCCceEEEecChHHHHHHHHHHHHHHHHhCc-----eeEEEEecCC
Confidence 468999999999998 789999999999999875 4999999987
No 10
>2k0q_A Putative uncharacterized protein COPK; copper, heavy metal resistance, open barrel, plasmid- encoded, metal binding protein; NMR {Cupriavidus metallidurans} PDB: 2km0_A 2lel_A 3dso_A 3dsp_A 3n7d_A 3n7e_A
Probab=54.64 E-value=4.9 Score=27.17 Aligned_cols=16 Identities=31% Similarity=0.542 Sum_probs=13.6
Q ss_pred CCCCCceeEEeeCCCc
Q 031207 92 LLPSPTDLHLFKEGIR 107 (164)
Q Consensus 92 ~L~~~~~~~lFK~GI~ 107 (164)
.|..++++|+||+|=-
T Consensus 11 ~LkDGstvyiFKDGKM 26 (74)
T 2k0q_A 11 DLQDGSKVHVFKDGKM 26 (74)
T ss_dssp EBTTSCEEEEETTSCE
T ss_pred ecCCCcEEEEEcCCce
Confidence 5788999999999854
No 11
>1nrp_R Receptor based peptide NR'S; serine proteinase/receptor; 3.00A {Homo sapiens} PDB: 1nrn_R 1nrq_R*
Probab=25.79 E-value=22 Score=18.92 Aligned_cols=12 Identities=33% Similarity=0.925 Sum_probs=9.0
Q ss_pred CCCccccccCCC
Q 031207 104 EGIRPLWEDSAN 115 (164)
Q Consensus 104 ~GI~P~WEDp~N 115 (164)
+.-+|-|||...
T Consensus 13 dkyepfwedee~ 24 (26)
T 1nrp_R 13 DKYEPFWEDEEX 24 (26)
T ss_pred cccCcccccccc
Confidence 356899999753
No 12
>1nro_R Receptor based peptide NRP; serine proteinase/receptor; 3.10A {Homo sapiens}
Probab=21.79 E-value=27 Score=18.73 Aligned_cols=11 Identities=36% Similarity=1.017 Sum_probs=8.6
Q ss_pred CCCccccccCC
Q 031207 104 EGIRPLWEDSA 114 (164)
Q Consensus 104 ~GI~P~WEDp~ 114 (164)
+.-+|-|||..
T Consensus 13 dkyepfwedee 23 (27)
T 1nro_R 13 DKYEPFWEDEE 23 (27)
T ss_pred cccCccccchh
Confidence 35689999975
Done!