Query 031210
Match_columns 164
No_of_seqs 137 out of 601
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 17:13:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031210.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031210hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfy_A OTU domain-containing p 99.9 6.2E-26 2.1E-30 182.8 5.2 81 66-164 56-136 (185)
2 3by4_A OTU1, ubiquitin thioest 99.9 2.3E-25 8E-30 182.2 6.3 79 67-163 18-96 (212)
3 3phx_A RNA-directed RNA polyme 99.9 9E-24 3.1E-28 169.8 6.2 103 48-164 10-112 (185)
4 3phu_A RNA-directed RNA polyme 99.9 7.5E-23 2.5E-27 168.7 6.1 91 59-163 21-111 (219)
5 1tff_A Ubiquitin thiolesterase 99.5 2E-14 7E-19 118.8 7.3 53 106-164 132-185 (234)
6 4ddg_A Ubiquitin-conjugating e 99.3 5.9E-12 2E-16 110.7 7.1 52 106-163 300-352 (399)
7 4dhi_B Ubiquitin thioesterase 99.2 1E-11 3.6E-16 105.7 7.3 52 106-163 170-222 (284)
8 2zfy_A Ubiquitin thioesterase 99.1 5.5E-11 1.9E-15 98.1 4.4 72 76-164 116-188 (234)
9 2zfy_A Ubiquitin thioesterase 96.4 0.0015 5.1E-08 53.5 2.5 40 52-91 20-65 (234)
10 3dkb_A Tumor necrosis factor, 92.8 0.1 3.6E-06 45.9 4.5 42 68-119 111-152 (390)
11 3zrh_A Ubiquitin thioesterase 84.6 0.45 1.5E-05 42.6 2.4 51 58-118 176-228 (454)
12 2jn4_A Hypothetical protein FI 30.5 7.4 0.00025 27.5 -0.8 20 141-160 43-62 (87)
No 1
>3pfy_A OTU domain-containing protein 5; structural genomics, structural genomics consortium, SGC, PE C65 otubain, hydrolase; HET: MSE PG4; 1.70A {Homo sapiens} PDB: 3tmp_A* 3tmo_A*
Probab=99.92 E-value=6.2e-26 Score=182.82 Aligned_cols=81 Identities=17% Similarity=0.383 Sum_probs=53.3
Q ss_pred hcCeEEEEecCCCchhhHHHHHHHHhhcCCCCCcchhhhhHHHHHHHHHHHHhhcccCchhhHHHhhhhcchhhHHHHHH
Q 031210 66 VERYLVQRVTGDGRCLFRALVKGMALNKGINLNSREEREDADDLRMAVKEVICDSGSERRQYEEALISITIDESLKRYCQ 145 (164)
Q Consensus 66 ~~gL~i~eIpgDGnCLFRAIadQL~~~~G~~~~~~~~~~~~~~LR~~vad~I~~~~~~~~d~~e~fi~~~~ee~fd~Yc~ 145 (164)
.+||.+++||+|||||||||++||+.. ...+.+||+.+++||+. +++++++| ++++|++||+
T Consensus 56 ~~gL~~~~I~~DGnCLFrAia~qL~g~----------~~~h~~LR~~vv~yi~~----n~d~f~~F----v~~~~e~Y~~ 117 (185)
T 3pfy_A 56 KKGFIIKQMKEDGACLFRAVADQVYGD----------QDMHEVVRKHCMDYLMK----NADYFSNY----VTEDFTTYIN 117 (185)
T ss_dssp HHCCEEECCCCSTTHHHHHHHHHHHSC----------GGGHHHHHHHHHHHHHH----THHHHTTC----C---------
T ss_pred HCCcEEEeeCCCCChHHHHHHHHHhCC----------chHHHHHHHHHHHHHHH----HHHHHHHH----HhccHHHHHH
Confidence 379999999999999999999999942 13588999999999984 44555566 3678999999
Q ss_pred HhcCCCccccHHhHhhccC
Q 031210 146 RIGRSDFWGGESELLVSTC 164 (164)
Q Consensus 146 ~m~~~~~WGGeiEL~ALS~ 164 (164)
+|+++++|||++||+|||.
T Consensus 118 ~m~~~~~WGg~iEL~AlS~ 136 (185)
T 3pfy_A 118 RKRKNNCHGNHIEMQAMAE 136 (185)
T ss_dssp --------CCHHHHHHHHH
T ss_pred HhhCCCccchHHHHHHHHH
Confidence 9999999999999999983
No 2
>3by4_A OTU1, ubiquitin thioesterase OTU1; ubiquitin hydrolase, deubiquitinase, cell cycle, hydrolase; 1.55A {Saccharomyces cerevisiae} PDB: 3c0r_A
Probab=99.91 E-value=2.3e-25 Score=182.19 Aligned_cols=79 Identities=28% Similarity=0.537 Sum_probs=68.8
Q ss_pred cCeEEEEecCCCchhhHHHHHHHHhhcCCCCCcchhhhhHHHHHHHHHHHHhhcccCchhhHHHhhhhcchhhHHHHHHH
Q 031210 67 ERYLVQRVTGDGRCLFRALVKGMALNKGINLNSREEREDADDLRMAVKEVICDSGSERRQYEEALISITIDESLKRYCQR 146 (164)
Q Consensus 67 ~gL~i~eIpgDGnCLFRAIadQL~~~~G~~~~~~~~~~~~~~LR~~vad~I~~~~~~~~d~~e~fi~~~~ee~fd~Yc~~ 146 (164)
.+|.+++||+|||||||||++|| +. . ..+.+||+.+++||+. +++.|.++| ++++|++||++
T Consensus 18 ~~l~~~~i~~DGnCLFrAva~qL-~~--~--------~~~~~lR~~vv~yi~~---n~d~f~e~~----~~~~~e~Y~~~ 79 (212)
T 3by4_A 18 NVLSVHPVLDDNSCLFHAIAYGI-FK--Q--------DSVRDLREMVSKEVLN---NPVKFNDAI----LDKPNKDYAQW 79 (212)
T ss_dssp SEEEEECCCCSTTHHHHHHHHHH-HS--S--------CCSHHHHHHHHHHHHH---CTTTTCHHH----HTSCHHHHHHH
T ss_pred CCeEEEEeCCCCchHHHHHHHHh-CC--c--------hHHHHHHHHHHHHHHH---CHHHHhhhh----cCCCHHHHHHH
Confidence 57999999999999999999999 52 1 2467999999999984 555665777 47899999999
Q ss_pred hcCCCccccHHhHhhcc
Q 031210 147 IGRSDFWGGESELLVST 163 (164)
Q Consensus 147 m~~~~~WGGeiEL~ALS 163 (164)
|+++++|||++||+|||
T Consensus 80 m~~~~~WGg~iEL~Als 96 (212)
T 3by4_A 80 ILKMESWGGAIEIGIIS 96 (212)
T ss_dssp TTSTTSCCCHHHHHHHH
T ss_pred hcCCCEEccHHHHHHHH
Confidence 99999999999999998
No 3
>3phx_A RNA-directed RNA polymerase L; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase-protein complex; 1.60A {Crimean-congo hemorrhagic fever virus} PDB: 3phw_A 3pt2_A 3pse_A 3prp_A 3prm_A
Probab=99.89 E-value=9e-24 Score=169.84 Aligned_cols=103 Identities=17% Similarity=0.234 Sum_probs=77.1
Q ss_pred eeeeccCCCCCCchhhhhhcCeEEEEecCCCchhhHHHHHHHHhhcCCCCCcchhhhhHHHHHHHHHHHHhhcccCchhh
Q 031210 48 FFARIGPPLGGGSPVMKKVERYLVQRVTGDGRCLFRALVKGMALNKGINLNSREEREDADDLRMAVKEVICDSGSERRQY 127 (164)
Q Consensus 48 ~~~~~~~~~~~~~~~~~k~~gL~i~eIpgDGnCLFRAIadQL~~~~G~~~~~~~~~~~~~~LR~~vad~I~~~~~~~~d~ 127 (164)
.|+++-..-+=..|......+|.+.+||+|||||||||++||+... .. ...+..+.+||+.+++||+. ++++
T Consensus 10 ~~~~~~~~~~~~~p~~~~~~~~~v~rv~gDGnCLFrAva~qL~~~~--~~--~~~~~~~~~LR~~~~~yi~~---~~~~- 81 (185)
T 3phx_A 10 DWTQVIAGQYVSNPRFNISDYFEIVRQPGDGNCFYHSIAELTMPNK--TD--HSYHYIKRLTESAARKYYQE---EPEA- 81 (185)
T ss_dssp CCEEEETTEEEECCCCBHHHHEEEECCCSSTTHHHHHHHHHHSTTC--CT--TTHHHHHHHHHHHHHHHGGG---CTTH-
T ss_pred ceeeecccceecCCCcccccCeEEEccCCCCchHHHHHHHHHhCCC--cc--chhhhHHHHHHHHHHHHHHh---ChHh-
Confidence 3444433333344566666789999999999999999999999531 11 11223488999999999984 3333
Q ss_pred HHHhhhhcchhhHHHHHHHhcCCCccccHHhHhhccC
Q 031210 128 EEALISITIDESLKRYCQRIGRSDFWGGESELLVSTC 164 (164)
Q Consensus 128 ~e~fi~~~~ee~fd~Yc~~m~~~~~WGGeiEL~ALS~ 164 (164)
++ ++++|++||++|+++++|||++||+|||.
T Consensus 82 --~~----~~~~~~~Y~~~m~~~~~WGg~iEL~Als~ 112 (185)
T 3phx_A 82 --RL----VGLSLEDYLKRMLSDNEWGSTLEASMLAK 112 (185)
T ss_dssp --HH----HCCCHHHHHHHHTSTTCCCBHHHHHHHHH
T ss_pred --hh----cCCCHHHHHHHhhCCCccCcHHHHHHHHH
Confidence 33 58899999999999999999999999973
No 4
>3phu_A RNA-directed RNA polymerase L; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase; 2.20A {Crimean-congo hemorrhagic fever VIRUSIBAR10200}
Probab=99.87 E-value=7.5e-23 Score=168.71 Aligned_cols=91 Identities=20% Similarity=0.310 Sum_probs=72.0
Q ss_pred CchhhhhhcCeEEEEecCCCchhhHHHHHHHHhhcCCCCCcchhhhhHHHHHHHHHHHHhhcccCchhhHHHhhhhcchh
Q 031210 59 GSPVMKKVERYLVQRVTGDGRCLFRALVKGMALNKGINLNSREEREDADDLRMAVKEVICDSGSERRQYEEALISITIDE 138 (164)
Q Consensus 59 ~~~~~~k~~gL~i~eIpgDGnCLFRAIadQL~~~~G~~~~~~~~~~~~~~LR~~vad~I~~~~~~~~d~~e~fi~~~~ee 138 (164)
..|......+|.|++||||||||||||++||+..+ .. ...+..+.+||+.+++||+. ++ +. ++ +++
T Consensus 21 ~~p~~~~~~~~~V~rvpgDGnCLFrAVs~qL~~~~--~~--~~~~~~h~~LR~~va~yi~~---n~-d~--~~----~~~ 86 (219)
T 3phu_A 21 SNPRFNISDYFEIVRQPGDGNCFYHSIAELTMPNK--TD--HSYHYIKRLTESAARKYYQE---EP-EA--RL----VGL 86 (219)
T ss_dssp ECCCCBHHHHEEEECCCCSSCHHHHHHHHHHCTTC--CT--TTHHHHHHHHHHHHHHHGGG---CH-HH--HH----HCC
T ss_pred cCCCcccccceEEEccCCCCchHHHHHHHHHhCCC--cc--chhhhHHHHHHHHHHHHHHh---Ch-hh--hh----cCC
Confidence 34556666789999999999999999999998531 11 11223488999999999984 33 33 33 588
Q ss_pred hHHHHHHHhcCCCccccHHhHhhcc
Q 031210 139 SLKRYCQRIGRSDFWGGESELLVST 163 (164)
Q Consensus 139 ~fd~Yc~~m~~~~~WGGeiEL~ALS 163 (164)
+|++||++|+++++|||++||+|||
T Consensus 87 ~feeY~~~m~~~g~WGG~iEL~AlS 111 (219)
T 3phu_A 87 SLEDYLKRMLSDNEWGSTLEASMLA 111 (219)
T ss_dssp CHHHHHHHHHSTTCCCCHHHHHHHH
T ss_pred CHHHHHHHhcCCCccCCHHHHHHHH
Confidence 9999999999999999999999997
No 5
>1tff_A Ubiquitin thiolesterase protein OTUB2; hydrolase; 2.10A {Homo sapiens} SCOP: d.3.1.11
Probab=99.51 E-value=2e-14 Score=118.85 Aligned_cols=53 Identities=13% Similarity=0.220 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHhhcccCchhhHHHhhhhcchhhHHHHHH-HhcCCCccccHHhHhhccC
Q 031210 106 ADDLRMAVKEVICDSGSERRQYEEALISITIDESLKRYCQ-RIGRSDFWGGESELLVSTC 164 (164)
Q Consensus 106 ~~~LR~~vad~I~~~~~~~~d~~e~fi~~~~ee~fd~Yc~-~m~~~~~WGGeiEL~ALS~ 164 (164)
...||..++.||+. +.+++++|+. .+.+|++||+ .|+.+++||||+||+|||.
T Consensus 132 v~~lR~lta~~i~~----~~d~f~pFi~--~~~~~~~yC~~~ve~~~~~~~~iei~ALa~ 185 (234)
T 1tff_A 132 VQFLRLLTSAFIRN----RADFFRHFID--EEMDIKDFCTHEVEPMATECDHIQITALSQ 185 (234)
T ss_dssp HHHHHHHHHHHHHH----THHHHGGGSC--TTSCHHHHHHHHTSSTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH----CHHHHhhhhc--CCCCHHHHHHHHhhhhhcccccHHHHHHHH
Confidence 45689999999983 4556666652 2348999999 8999999999999999973
No 6
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.26 E-value=5.9e-12 Score=110.74 Aligned_cols=52 Identities=13% Similarity=0.197 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHhhcccCchhhHHHhhhhcchhhHHHHHH-HhcCCCccccHHhHhhcc
Q 031210 106 ADDLRMAVKEVICDSGSERRQYEEALISITIDESLKRYCQ-RIGRSDFWGGESELLVST 163 (164)
Q Consensus 106 ~~~LR~~vad~I~~~~~~~~d~~e~fi~~~~ee~fd~Yc~-~m~~~~~WGGeiEL~ALS 163 (164)
...||..++.||+. +.+++++|+. .+.++++||+ .|+.+++||||+||.|||
T Consensus 300 v~~lRllts~~i~~----~~d~f~pFi~--~~~~v~~yc~~~ve~~~~e~d~l~I~ALa 352 (399)
T 4ddg_A 300 VVYLRLLTSGYLQR----ESKFFEHFIE--GGRTVKEFCQQEVEPMCKESDHIHIIALA 352 (399)
T ss_dssp HHHHHHHHHHHHHH----THHHHGGGSS--SSCCHHHHHHHHTSSTTCCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHH----CHHHHhcccC--CCCCHHHHHHHhceeHHhhCcHHHHHHHH
Confidence 44589999999973 4555556641 2347999999 999999999999999997
No 7
>4dhi_B Ubiquitin thioesterase otubain-like; ubiquitin E2 enzyme fold, ubiquitination, hydrolase-ligase C; 1.80A {Caenorhabditis elegans} PDB: 4dhj_A 4dhz_A
Probab=99.24 E-value=1e-11 Score=105.74 Aligned_cols=52 Identities=10% Similarity=0.052 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHhhcccCchhhHHHhhhhcchhhHHHHHH-HhcCCCccccHHhHhhcc
Q 031210 106 ADDLRMAVKEVICDSGSERRQYEEALISITIDESLKRYCQ-RIGRSDFWGGESELLVST 163 (164)
Q Consensus 106 ~~~LR~~vad~I~~~~~~~~d~~e~fi~~~~ee~fd~Yc~-~m~~~~~WGGeiEL~ALS 163 (164)
...||..++.||+. |.+++++|+. .+.++++||+ +|+.+++|||++||.|||
T Consensus 170 v~~LRllts~yi~~----~~d~f~pFi~--~~~~v~~yC~~eVe~~~~e~d~leI~ALa 222 (284)
T 4dhi_B 170 LMFFRLITSAFLKQ----NSEEYAPFID--EGMTVAQYCEQEIEPMWKDADHLAINSLI 222 (284)
T ss_dssp HHHHHHHHHHHHHH----THHHHGGGSC--TTCCHHHHHHHHTSSTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHH----CHHHHHhhcC--CCCCHHHHHHHhceehhhcccHHHHHHHH
Confidence 44689999999983 4455555641 2358999999 899999999999999997
No 8
>2zfy_A Ubiquitin thioesterase OTUB1; otubain, structural genomics, structural genomics consortium, SGC, alternative splicing, hydrolase, immune response; 1.69A {Homo sapiens} PDB: 4ddg_B 4ddi_A
Probab=99.09 E-value=5.5e-11 Score=98.09 Aligned_cols=72 Identities=11% Similarity=0.089 Sum_probs=58.0
Q ss_pred CCCchhhHHHHHHHHhhcCCCCCcchhhhhHHHHHHHHHHHHhhcccCchhhHHHhhhhcchhhHHHHHH-HhcCCCccc
Q 031210 76 GDGRCLFRALVKGMALNKGINLNSREEREDADDLRMAVKEVICDSGSERRQYEEALISITIDESLKRYCQ-RIGRSDFWG 154 (164)
Q Consensus 76 gDGnCLFRAIadQL~~~~G~~~~~~~~~~~~~~LR~~vad~I~~~~~~~~d~~e~fi~~~~ee~fd~Yc~-~m~~~~~WG 154 (164)
.||+||++++.+|+.-. .....||..++.||+. +++++++|+. .+.+|++||+ .|+.+++||
T Consensus 116 ~~~~~L~~~fndq~~s~-----------~~v~~lR~lta~yi~~----~~d~f~pFi~--~~~~~e~yc~~~ve~~~~~~ 178 (234)
T 2zfy_A 116 TSVADLLASFNDQSTSD-----------YLVVYLRLLTSGYLQR----ESKFFEHFIE--GGRTVKEFCQQEVEPMCKES 178 (234)
T ss_dssp CCHHHHHHHHTSHHHHH-----------HHHHHHHHHHHHHHHH----THHHHGGGCC--SSCCHHHHHHHHTSSTTCCC
T ss_pred CCHHHHHHHHHhhccch-----------HHHHHHHHHHHHHHHH----CHHHHhcccC--CCCCHHHHHHHHhhhHhhcC
Confidence 39999999999998632 2467899999999983 4555666652 2348999997 699999999
Q ss_pred cHHhHhhccC
Q 031210 155 GESELLVSTC 164 (164)
Q Consensus 155 GeiEL~ALS~ 164 (164)
||+||+|||.
T Consensus 179 ~~i~i~ALa~ 188 (234)
T 2zfy_A 179 DHIHIIALAQ 188 (234)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9999999973
No 9
>2zfy_A Ubiquitin thioesterase OTUB1; otubain, structural genomics, structural genomics consortium, SGC, alternative splicing, hydrolase, immune response; 1.69A {Homo sapiens} PDB: 4ddg_B 4ddi_A
Probab=96.36 E-value=0.0015 Score=53.50 Aligned_cols=40 Identities=18% Similarity=0.434 Sum_probs=27.8
Q ss_pred ccCCCCCCchh-hhhh----cCe-EEEEecCCCchhhHHHHHHHHh
Q 031210 52 IGPPLGGGSPV-MKKV----ERY-LVQRVTGDGRCLFRALVKGMAL 91 (164)
Q Consensus 52 ~~~~~~~~~~~-~~k~----~gL-~i~eIpgDGnCLFRAIadQL~~ 91 (164)
+..+.++..|+ .+|+ ..| .+++|.|||||.|||++.++-.
T Consensus 20 L~~eY~~~~~~~~~K~~~L~~~y~~~R~vRgDGNCFyRaf~f~ylE 65 (234)
T 2zfy_A 20 LYKEYAEDDNIYQQKIKDLHKKYSYIRKTRPDGNCFYRAFGFSHLE 65 (234)
T ss_dssp GGGGSCTTCHHHHHHHHHHTTTCCEEECBCCSSCHHHHHHHHHHHH
T ss_pred HHHHHccCCHHHHHHHHHHHHhccceeeccCCccHHHHHHHHHHHH
Confidence 44555534444 3344 234 5789999999999999998875
No 10
>3dkb_A Tumor necrosis factor, alpha-induced protein 3; OTU domain, DUB domain, apoptosis, cytoplasm, DNA-binding, hydrolase, metal-binding, nucleus; 2.50A {Homo sapiens} PDB: 2vfj_A
Probab=92.77 E-value=0.1 Score=45.87 Aligned_cols=42 Identities=24% Similarity=0.328 Sum_probs=30.1
Q ss_pred CeEEEEecCCCchhhHHHHHHHHhhcCCCCCcchhhhhHHHHHHHHHHHHhh
Q 031210 68 RYLVQRVTGDGRCLFRALVKGMALNKGINLNSREEREDADDLRMAVKEVICD 119 (164)
Q Consensus 68 gL~i~eIpgDGnCLFRAIadQL~~~~G~~~~~~~~~~~~~~LR~~vad~I~~ 119 (164)
.|......||||||.+|++-.|++...+. --||+...+.|..
T Consensus 111 rL~pL~t~GDGnCLLHAvSqamWGv~Drd----------lvLRkaL~~~L~~ 152 (390)
T 3dkb_A 111 KLVALKTNGDGNCLMHATSQYMWGVQDTD----------LVLRKALFSTLKE 152 (390)
T ss_dssp CEEEBCCCCSSCHHHHHHHHHHHSSCSTT----------CHHHHHHHHHHHH
T ss_pred ceEEEEecCCCchHHHHHhHHhcCCCCHh----------HHHHHHHHHHHHh
Confidence 35555668999999999999999532222 2677777777753
No 11
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=84.56 E-value=0.45 Score=42.61 Aligned_cols=51 Identities=20% Similarity=0.270 Sum_probs=32.5
Q ss_pred CCchhhhh-h-cCeEEEEecCCCchhhHHHHHHHHhhcCCCCCcchhhhhHHHHHHHHHHHHh
Q 031210 58 GGSPVMKK-V-ERYLVQRVTGDGRCLFRALVKGMALNKGINLNSREEREDADDLRMAVKEVIC 118 (164)
Q Consensus 58 ~~~~~~~k-~-~gL~i~eIpgDGnCLFRAIadQL~~~~G~~~~~~~~~~~~~~LR~~vad~I~ 118 (164)
||...+-. + ..|.-....||||||-+|++-.|+ |.+- ..--||+...+.|.
T Consensus 176 NW~~e~~~~~~~rL~pL~t~GDGNCLLHAvSqamW---GV~D-------rdlvLRkaL~~~L~ 228 (454)
T 3zrh_A 176 NWSLELATRLDSRLYALWNRTAGDCLLDSVLQATW---GIYD-------KDSVLRKALHDSLH 228 (454)
T ss_dssp SCCHHHHTTTCCCEEEBCCCCSSCHHHHHHHHTTT---SSCC-------GGGHHHHHHHHHHH
T ss_pred cchhhhccccccceeEeeecCCCccHHHHHHHHhh---cccC-------CcHHHHHHHHHHHH
Confidence 45554421 2 244445668999999999999999 4432 12256777666664
No 12
>2jn4_A Hypothetical protein FIXU, NIFT; structural genomics, PSI-2, protein structure initiative, northeast ST genomics consortium, NESG; NMR {Rhodopseudomonas palustris} SCOP: b.173.1.1
Probab=30.54 E-value=7.4 Score=27.47 Aligned_cols=20 Identities=20% Similarity=0.564 Sum_probs=14.1
Q ss_pred HHHHHHhcCCCccccHHhHh
Q 031210 141 KRYCQRIGRSDFWGGESELL 160 (164)
Q Consensus 141 d~Yc~~m~~~~~WGGeiEL~ 160 (164)
|+=+-.|++++.|||.+.|.
T Consensus 43 EE~VVs~E~~~~WGG~vtLa 62 (87)
T 2jn4_A 43 EELIVEMENPALWGGKVTLA 62 (87)
T ss_dssp EEEEEEESSSSSCSSEEEET
T ss_pred hhheeeeecccccCcEEEEC
Confidence 33344566999999998763
Done!